Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr11

Orthogroup ID

OG0006399

Physical Location & Seq

Genomic Coordinates Forward (+)

4569513 .. 4579331

Gene Structure 9819 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD11G1053700.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2124 bp

ATGAGCCAAACACAACAGAATAAAGGTTGGCCTTTGCGTACCGGTGGATTTGCCCATCTCTGCTACAAGTGCGGAGTTGAGTATGAGAATTCAGTTTACTGCAATACATTCCATTCTGGGGAAACTGGTTGGAGGGACTGCAATTTGTGCCACAAGCCTCTCCACTGTGGATGCATAGTCTCAAAGACATTGTATGAGTACCTGGATTTTGGAGGTATAGGGTGCATTGGCTGTGCTTCTCAACCTCACATGGACGGTGATGTTTTAAATGGGTTTGTTGGATTGAAAATAAGTGATTCCGGTGATCAGCAATCAACTGTTCCTCAGAATGGAGCATTAAGTGATACTGCTAATGAGGGAAAACTTTTGCAATTGTGCCAAGTCATGGAGGCTAATGAATCCAACCTTTCGTCTCAATCTCAGAGAGGTGAAATAAATGTATCTCCTGTGCAAACCAAACGAGAAGAAGTTACTTATCCAAGGGGGGAAGTTGGCCCAGGATTTTCAAGTATCACCACCAGGCCATCTTTTGGATCATTAACATTTGCCAAACCAGACAATGGTAGAATAATGATAGAGGTCAAAGATATGAATAAGACATCCTCTGAGCCGTGTTTGAGTATGACTTTGGGAGGCCCATCTGCAACTCCCAACTTTGCTCAACCCTTTACTGGGGGAATTTTGGAGAGAAGAGATCAGAGCAAGATGTCTTCTTCCTTCCAACAGGGGCAAAAAATTCGGCCTATTTTTCCCACACCCTTGAGACCTCCCCCTCCTGTTCATCATGTGCGTGTTGCAAGGCCACCTGCTGAAGGGCGAGGGAAGAGTCAGTTACTTCCTCGATACTGGCCAAGGATTACTGACCAAGAGCTGCAGAAATTAGCTGGAGATTTGAATTCTACTATTGTGCCATTGTTCGAGAAGGTACTGAGTGCCAGCGATGCAGGTCGAATTGGTCGTCTGGTTCTCCCAAAAGCATGTGCTGAGGCATACTTTCCTCCTATTTCTCAATCAGAAGGCCTTCCTATAAGGATTCAAGATGTCAAGGATAATGAATGGACGTTTCAGTTCAGATTTTGGCCAAATAATAATAGCAGGATGTATGTTTTAGAAGGAGTAACGCCTTGCATACAGTCTATGCAGCTTGAAGCTGGTGATACTGTGACATTCAGTCGGATAGATCCCGGAGGCAGACTTGTAATTGGGTTTCGTAAGGCATCAAGATGTTTAGATGTGCAGGAGCCCCCAGTTTTTGGGAAGAGATCTCTATTCATTGCCGAATCTGAGAGACAGGAACAATGGGCTCGGATTGACGATTGCTCCAAGTGGCGGAGGTTGCCTGTCGACGTTCTTCTTCCTCCAAAGTGGACGTGCTCTGAAAATTCTTGGGATGTAAACAGAATCATAGTGAACCATAATGAAGCCCAGGAACACGAACCTTCTGGCTTGGATGCCCTGGCTAGTGCTAGTGCCACCATTCTGGGAGATAGTGTGGATTACGCTGATGAACAATCAGTTGGACCCACAACCAGACCTCCCTGTCATCGCCCAGGTTGCACTTGCATAGAATGTATTCAACCCCCAAGCGGGAAGGGCAAGCACAAGTCAACATGTACATGCAACGTGTGCATGACAGTAAAACGGCGCTTCAAAACCCTGATGATGAACAAGAGGAAACGCAAATCAGAACGTGAAATGGAGAATGCCCACAGGGATAATAATGACCACAAGGACGAATCAGAAATGAATGGCATGTCAACAGAGATTGAGTTGCATATGAATCACTCATCGGAGAATGGAAGCAGCTGCGAGAAGAGAATTCAAGCTGACGTGGCAGAAAGTTCATGCGCTGGACAAATTGATCTGAATTGTGAGCCCAAACACAATTATGTGCAGGTTTCAGGATTGACCTTGTTGAGACTTGCTGACGCTGTTGCTCAACAACCAGTAACGAACAGCACGAAGGAAAGTGGCCTAACAAACAGAATGTGCGAGCCACAGAGTCTTGGTTCTTCTTTACATTCACAAGATACTGTGGAGACTGATAAACTCTTGTGTAATGAAGGCAGCCTTTCATCCGTAGCAGCGGCGTGGGACTTGGAGGGTAGAGGTAATGAGGACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

B3 zf-CW

Protein Analysis

708

Amino Acids

78.13

Weight (kDa)

6.15

Isoelectric Point (pI)

52.73

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf_VAL1_N	PF25813	36 - 83	4.5e-23	VAL1-like, N-terminal zinc finger domain
B3	PF02362	306 - 406	7.1e-16	B3 DNA binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006399)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g40520 FvH4_3g40520 FvH4_3g40520 FvH4_3g40520 FvH4_3g40520 FvH4_3g40520 FvH4_3g40520 FvH4_3g40520
malus_domestica	MD03G1051600.v1.1 MD11G1053500.v1.1 MD11G1053700.v1.1
prunus_persica	Prupe.6G041000_v2.0.a1 Prupe.6G041000_v2.0.a1 Prupe.6G041000_v2.0.a1
pyrus_communis	pycom03g04100 pycom11g04330
rosa_chinensis	RchiOBHm_Chr5g0073201
rosa_laevigata	RLG00000036373
rosa_multiflora	Rmu_sc0001887.1_g000012
rosa_roxburghii	Rroxscaffold_1G00007990
rosa_rugosa	Rorug05G0422000 Rorug05G0422100
rosa_samantha	Rh5AG478900 Rh5BG499600 Rh5CG522800 Rh5DG511700
rosa_wichuraiana	Rw5G044520

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	814
AasI	GACNNNNNNGTC	1 cut(s)	1539
Acc36I	ACCTGC	3 cut(s)	814, 935, 1885
AccB7I	CCANNNNNTGG	4 cut(s)	385, 530, 560, 1253
AccI	GTMKAC	1 cut(s)	1344
AciI	CCGC	4 cut(s)	72, 1330, 1587, 2087
AclWI	GGATC	2 cut(s)	541, 1175
AcoI	YGGCCR	2 cut(s)	848, 1079
AcsI	RAATTY	6 cut(s)	88, 678, 735, 895, 1381, 1818
AcuI	CTGAAG	1 cut(s)	831
AfaI	GTAC	4 cut(s)	40, 200, 927, 1615
AflIII	ACRYGT	2 cut(s)	1610, 1623
AgeI	ACCGGT	1 cut(s)	41
AgsI	TTSAA	8 cut(s)	286, 507, 895, 1037, 1148, 1577, 1651, 1823
AhdI	GACNNNNNGTC	1 cut(s)	1170
AjiI	CACGTC	2 cut(s)	1371, 1831
AjnI	CCWGG	6 cut(s)	201, 496, 518, 1425, 1455, 1549
AjuI	GAANNNNNNNTTGG	2 cut(s)	1500, 1532
AluBI	AGCT	6 cut(s)	871, 884, 1144, 1151, 1806, 1826
AluI	AGCT	6 cut(s)	871, 884, 1144, 1151, 1806, 1826
Alw21I	GWGCWC	1 cut(s)	1376
Alw26I	GTCTC	6 cut(s)	184, 417, 757, 1282, 1912, 2033
AlwI	GGATC	2 cut(s)	541, 1175
ApeKI	GCWGC	6 cut(s)	871, 1141, 1803, 1806, 2067, 2084
ApoI	RAATTY	6 cut(s)	88, 678, 735, 895, 1381, 1818
ArsI	GACNNNNNNTTYG	2 cut(s)	943, 975
AsiGI	ACCGGT	1 cut(s)	41
Asp700I	GAANNNNTTC	2 cut(s)	1020, 1572
AspLEI	GCGC	2 cut(s)	1647, 1850
AspS9I	GGNCC	3 cut(s)	494, 635, 1520
AsuC2I	CCSGG	1 cut(s)	1185
AsuHPI	GGTGA	5 cut(s)	269, 314, 440, 505, 1166
AvaII	GGWCC	1 cut(s)	1520
BalI	TGGCCA	2 cut(s)	850, 1081
BanII	GRGCYC	3 cut(s)	1245, 1306, 1878
BbsI	GAAGAC	1 cut(s)	702
Bbv12I	GWGCWC	1 cut(s)	1376
BbvCI	CCTCAGC	1 cut(s)	984
BbvI	GCAGC	6 cut(s)	858, 1153, 1793, 1815, 2079, 2096
BccI	CCATC	3 cut(s)	63, 532, 646
BceAI	ACGGC	2 cut(s)	595, 1658
BcgI	CGANNNNNNTGC	2 cut(s)	719, 753
BciT130I	CCWGG	6 cut(s)	203, 498, 520, 1427, 1457, 1551
BclI	TGATCA	1 cut(s)	304
BcnI	CCSGG	1 cut(s)	1185
BcoDI	GTCTC	6 cut(s)	184, 417, 757, 1282, 1912, 2033
BfaI	CTAG	2 cut(s)	1461, 1467
BfmI	CTRYAG	1 cut(s)	872
BfoI	RGCGCY	1 cut(s)	1648
BfuAI	ACCTGC	3 cut(s)	814, 935, 1885
BglII	AGATCT	1 cut(s)	1262
BisI	GCNGC	7 cut(s)	872, 1142, 1804, 1807, 2068, 2085, 2088
BlsI	GCNGC	7 cut(s)	873, 1143, 1805, 1808, 2069, 2086, 2089
Bme1390I	CCNGG	7 cut(s)	203, 498, 520, 1185, 1427, 1457, 1551
Bme18I	GGWCC	1 cut(s)	1520
BmeRI	GACNNNNNGTC	1 cut(s)	1170
BmgBI	CACGTC	2 cut(s)	1371, 1831
BmgT120I	GGNCC	3 cut(s)	494, 635, 1520
BmiI	GGNNCC	2 cut(s)	1242, 1522
BmrFI	CCNGG	7 cut(s)	203, 498, 520, 1185, 1427, 1457, 1551
BmrI	ACTGGG	2 cut(s)	681, 1241
BmsI	GCATC	4 cut(s)	161, 931, 1226, 1441
BmuI	ACTGGG	2 cut(s)	681, 1241
BpiI	GAAGAC	1 cut(s)	702
BpmI	CTGGAG	1 cut(s)	906
Bpu10I	CCTNAGC	1 cut(s)	984
BpuEI	CTTGAG	1 cut(s)	781
BpuMI	CCSGG	1 cut(s)	1185
BsaI	GGTCTC	1 cut(s)	757
BsaJI	CCNNGG	6 cut(s)	479, 496, 851, 1425, 1455, 1549
BsaWI	WCCGGW	2 cut(s)	41, 299
BsaXI	ACNNNNNCTCC	6 cut(s)	1304, 1334, 1476, 1506, 1519, 1549
Bse118I	RCCGGY	1 cut(s)	41
Bse1I	ACTGG	5 cut(s)	130, 676, 851, 1247, 1946
Bse3DI	GCAATG	1 cut(s)	1272
BseBI	CCWGG	6 cut(s)	203, 498, 520, 1427, 1457, 1551
BseDI	CCNNGG	6 cut(s)	479, 496, 851, 1425, 1455, 1549
BseGI	GGATG	6 cut(s)	176, 599, 1104, 1396, 1456, 2075
BseMI	GCAATG	1 cut(s)	1272
BseMII	CTCAG	6 cut(s)	338, 434, 597, 920, 975, 1275
BseNI	ACTGG	5 cut(s)	130, 676, 851, 1247, 1946
BseXI	GCAGC	6 cut(s)	858, 1153, 1793, 1815, 2079, 2096
BsgI	GTGCAG	2 cut(s)	1256, 1913
BshTI	ACCGGT	1 cut(s)	41
BsiHKAI	GWGCWC	1 cut(s)	1376
BsiSI	CCGG	3 cut(s)	42, 300, 1185
BslFI	GGGAC	2 cut(s)	149, 2108
BsmAI	GTCTC	6 cut(s)	184, 417, 757, 1282, 1912, 2033
BsmBI	CGTCTC	1 cut(s)	417
BsmFI	GGGAC	2 cut(s)	149, 2108
BsmI	GAATGC	1 cut(s)	1708
Bso31I	GGTCTC	1 cut(s)	757
Bsp1286I	GDGCHC	4 cut(s)	1245, 1306, 1376, 1878
Bsp1407I	TGTACA	1 cut(s)	1613
Bsp143I	GATC	6 cut(s)	304, 533, 694, 1180, 1262, 1861
BspACI	CCGC	4 cut(s)	72, 1330, 1587, 2087
BspCNI	CTCAG	6 cut(s)	337, 433, 598, 921, 976, 1276
BspLI	GGNNCC	2 cut(s)	1242, 1522
BspMAI	CTGCAG	1 cut(s)	876
BspMI	ACCTGC	3 cut(s)	814, 935, 1885
BspPI	GGATC	2 cut(s)	541, 1175
BspTNI	GGTCTC	1 cut(s)	757
BsrDI	GCAATG	1 cut(s)	1272
BsrFI	RCCGGY	1 cut(s)	41
BsrGI	TGTACA	1 cut(s)	1613
BsrI	ACTGG	5 cut(s)	130, 676, 851, 1247, 1946
BssAI	RCCGGY	1 cut(s)	41
BssECI	CCNNGG	6 cut(s)	479, 496, 851, 1425, 1455, 1549
BssMI	GATC	6 cut(s)	304, 533, 694, 1180, 1262, 1861
BssT1I	CCWWGG	2 cut(s)	479, 851
Bst2UI	CCWGG	6 cut(s)	203, 498, 520, 1427, 1457, 1551
Bst4CI	ACNGT	7 cut(s)	167, 257, 319, 1134, 1162, 1636, 2035
Bst6I	CTCTTC	4 cut(s)	685, 818, 1253, 1808
BstAPI	GCANNNNNTGC	2 cut(s)	147, 1626
BstAUI	TGTACA	1 cut(s)	1613
BstC8I	GCNNGC	3 cut(s)	937, 1598, 1994
BstDEI	CTNAG	6 cut(s)	324, 420, 606, 929, 984, 1284
BstENI	CCTNNNNNAGG	1 cut(s)	810
BstF5I	GGATG	6 cut(s)	176, 599, 1104, 1396, 1456, 2075
BstH2I	RGCGCY	1 cut(s)	1648
BstHHI	GCGC	2 cut(s)	1647, 1850
BstKTI	GATC	6 cut(s)	307, 536, 697, 1183, 1265, 1864
BstMAI	GTCTC	6 cut(s)	184, 417, 757, 1282, 1912, 2033
BstMBI	GATC	6 cut(s)	304, 533, 694, 1180, 1262, 1861
BstMWI	GCNNNNNNNGC	8 cut(s)	69, 147, 941, 1336, 1554, 1593, 1626, 1832
BstNI	CCWGG	6 cut(s)	203, 498, 520, 1427, 1457, 1551
BstNSI	RCATGY	4 cut(s)	981, 1614, 1620, 1756
BstSCI	CCNGG	7 cut(s)	201, 496, 518, 1183, 1425, 1455, 1549
BstSFI	CTRYAG	1 cut(s)	872
BstV1I	GCAGC	6 cut(s)	858, 1153, 1793, 1815, 2079, 2096
BstV2I	GAAGAC	1 cut(s)	702
BstX2I	RGATCY	2 cut(s)	1180, 1262
BstXI	CCANNNNNNTGG	1 cut(s)	1480
BstYI	RGATCY	2 cut(s)	1180, 1262
BtgZI	GCGATG	2 cut(s)	954, 1529
BtrI	CACGTC	2 cut(s)	1371, 1831
BtsCI	GGATG	6 cut(s)	176, 599, 1104, 1396, 1456, 2075
BtsIMutI	CAGTG	1 cut(s)	163
BveI	ACCTGC	3 cut(s)	814, 935, 1885
Cac8I	GCNNGC	3 cut(s)	937, 1598, 1994
CfoI	GCGC	2 cut(s)	1647, 1850
Cfr10I	RCCGGY	1 cut(s)	41
Cfr13I	GGNCC	3 cut(s)	494, 635, 1520
CseI	GACGC	1 cut(s)	1937
Csp6I	GTAC	4 cut(s)	39, 199, 926, 1614
CspAI	ACCGGT	1 cut(s)	41
CviAII	CATG	9 cut(s)	250, 385, 785, 978, 1611, 1617, 1630, 1753, 1845
CviQI	GTAC	4 cut(s)	39, 199, 926, 1614
DdeI	CTNAG	6 cut(s)	324, 420, 606, 929, 984, 1284
DpnI	GATC	6 cut(s)	306, 535, 696, 1182, 1264, 1863
DpnII	GATC	6 cut(s)	304, 533, 694, 1180, 1262, 1861
DraI	TTTAAA	1 cut(s)	267
DrdI	GACNNNNNNGTC	1 cut(s)	1539
DriI	GACNNNNNGTC	1 cut(s)	1170
DseDI	GACNNNNNNGTC	1 cut(s)	1539
EaeI	YGGCCR	2 cut(s)	848, 1079
Eam1104I	CTCTTC	4 cut(s)	685, 818, 1253, 1808
Eam1105I	GACNNNNNGTC	1 cut(s)	1170
EarI	CTCTTC	4 cut(s)	685, 818, 1253, 1808
EciI	GGCGGA	1 cut(s)	1345
Eco130I	CCWWGG	2 cut(s)	479, 851
Eco147I	AGGCCT	1 cut(s)	1020
Eco24I	GRGCYC	3 cut(s)	1245, 1306, 1878
Eco31I	GGTCTC	1 cut(s)	757
Eco47I	GGWCC	1 cut(s)	1520
Eco57I	CTGAAG	1 cut(s)	831
EcoNI	CCTNNNNNAGG	1 cut(s)	810
EcoRI	GAATTC	3 cut(s)	88, 895, 1818
EcoRII	CCWGG	6 cut(s)	201, 496, 518, 1425, 1455, 1549
EcoT14I	CCWWGG	2 cut(s)	479, 851
EcoT22I	ATGCAT	1 cut(s)	176
EcoT38I	GRGCYC	3 cut(s)	1245, 1306, 1878
ErhI	CCWWGG	2 cut(s)	479, 851
Esp3I	CGTCTC	1 cut(s)	417
FaeI	CATG	9 cut(s)	253, 388, 788, 981, 1614, 1620, 1633, 1756, 1848
FalI	AAGNNNNNCTT	2 cut(s)	2055, 2087
FaqI	GGGAC	2 cut(s)	149, 2108
FatI	CATG	9 cut(s)	249, 384, 784, 977, 1610, 1616, 1629, 1752, 1844
FauI	CCCGC	1 cut(s)	1580
FauNDI	CATATG	1 cut(s)	1776
FbaI	TGATCA	1 cut(s)	304
FblI	GTMKAC	1 cut(s)	1344
Fnu4HI	GCNGC	7 cut(s)	872, 1142, 1804, 1807, 2068, 2085, 2088
FokI	GGATG	6 cut(s)	183, 586, 1111, 1403, 1463, 2062
FriOI	GRGCYC	3 cut(s)	1245, 1306, 1878
Fsp4HI	GCNGC	7 cut(s)	872, 1142, 1804, 1807, 2068, 2085, 2088
FspBI	CTAG	2 cut(s)	1461, 1467
GlaI	GCGC	2 cut(s)	1646, 1849
GluI	GCNGC	7 cut(s)	872, 1142, 1804, 1807, 2068, 2085, 2088
GsuI	CTGGAG	1 cut(s)	906
HaeII	RGCGCY	1 cut(s)	1648
HapII	CCGG	3 cut(s)	42, 300, 1185
HgaI	GACGC	1 cut(s)	1937
HhaI	GCGC	2 cut(s)	1647, 1850
Hin1II	CATG	9 cut(s)	253, 388, 788, 981, 1614, 1620, 1633, 1756, 1848
Hin6I	GCGC	2 cut(s)	1645, 1848
HinP1I	GCGC	2 cut(s)	1645, 1848
HincII	GTYRAC	3 cut(s)	1345, 1608, 1758
HindII	GTYRAC	3 cut(s)	1345, 1608, 1758
HinfI	GANTC	9 cut(s)	296, 398, 826, 1033, 1280, 1401, 1736, 1780, 2002
HpaII	CCGG	3 cut(s)	42, 300, 1185
HphI	GGTGA	5 cut(s)	269, 314, 440, 505, 1166
Hpy166II	GTNNAC	7 cut(s)	97, 1345, 1368, 1396, 1411, 1608, 1758
Hpy188III	TCNNGA	4 cut(s)	919, 1037, 1221, 1902
Hpy8I	GTNNAC	7 cut(s)	97, 1345, 1368, 1396, 1411, 1608, 1758
Hpy99I	CGWCG	1 cut(s)	1349
HpyCH4III	ACNGT	7 cut(s)	167, 257, 319, 1134, 1162, 1636, 2035
HpyCH4IV	ACGT	6 cut(s)	1061, 1347, 1370, 1623, 1690, 1830
HpyF10VI	GCNNNNNNNGC	8 cut(s)	69, 147, 941, 1336, 1554, 1593, 1626, 1832
HpyF3I	CTNAG	6 cut(s)	324, 420, 606, 929, 984, 1284
HpySE526I	ACGT	6 cut(s)	1061, 1347, 1370, 1623, 1690, 1830
Hsp92II	CATG	9 cut(s)	253, 388, 788, 981, 1614, 1620, 1633, 1756, 1848
HspAI	GCGC	2 cut(s)	1645, 1848
Ksp22I	TGATCA	1 cut(s)	304
Kzo9I	GATC	6 cut(s)	304, 533, 694, 1180, 1262, 1861
LmnI	GCTCC	3 cut(s)	332, 1240, 1325
Lsp1109I	GCAGC	6 cut(s)	858, 1153, 1793, 1815, 2079, 2096
LweI	GCATC	4 cut(s)	161, 931, 1226, 1441
MaeI	CTAG	2 cut(s)	1461, 1467
MaeII	ACGT	6 cut(s)	1061, 1347, 1370, 1623, 1690, 1830
MaeIII	GTNAC	5 cut(s)	469, 831, 1117, 1162, 1948
MalI	GATC	6 cut(s)	306, 535, 696, 1182, 1264, 1863
MboI	GATC	6 cut(s)	304, 533, 694, 1180, 1262, 1861
MfeI	CAATTG	1 cut(s)	371
MflI	RGATCY	2 cut(s)	1180, 1262
MhlI	GDGCHC	4 cut(s)	1245, 1306, 1376, 1878
MlsI	TGGCCA	2 cut(s)	850, 1081
MluNI	TGGCCA	2 cut(s)	850, 1081
MlyI	GAGTC	2 cut(s)	835, 2011
MmeI	TCCRAC	6 cut(s)	110, 259, 426, 745, 1154, 1498
Mox20I	TGGCCA	2 cut(s)	850, 1081
Mph1103I	ATGCAT	1 cut(s)	176
MroXI	GAANNNNTTC	2 cut(s)	1020, 1572
MscI	TGGCCA	2 cut(s)	850, 1081
MseI	TTAA	3 cut(s)	266, 338, 539
MslI	CAYNNNNRTG	4 cut(s)	789, 1222, 1615, 1887
Msp20I	TGGCCA	2 cut(s)	850, 1081
MspA1I	CMGCKG	2 cut(s)	1806, 2087
MspI	CCGG	3 cut(s)	42, 300, 1185
MspR9I	CCNGG	7 cut(s)	203, 498, 520, 1185, 1427, 1457, 1551
MunI	CAATTG	1 cut(s)	371
Mva1269I	GAATGC	1 cut(s)	1708
MvaI	CCWGG	6 cut(s)	203, 498, 520, 1427, 1457, 1551
MwoI	GCNNNNNNNGC	8 cut(s)	69, 147, 941, 1336, 1554, 1593, 1626, 1832
NciI	CCSGG	1 cut(s)	1185
NdeI	CATATG	1 cut(s)	1776
NdeII	GATC	6 cut(s)	304, 533, 694, 1180, 1262, 1861
NlaIII	CATG	9 cut(s)	253, 388, 788, 981, 1614, 1620, 1633, 1756, 1848
NlaIV	GGNNCC	2 cut(s)	1242, 1522
NmuCI	GTSAC	1 cut(s)	1162
NsiI	ATGCAT	1 cut(s)	176
NspI	RCATGY	4 cut(s)	981, 1614, 1620, 1756
PaqCI	CACCTGC	1 cut(s)	814
PceI	AGGCCT	1 cut(s)	1020
PciI	ACATGT	1 cut(s)	1610
PcsI	WCGNNNNNNNCGW	2 cut(s)	955, 1958
PctI	GAATGC	1 cut(s)	1708
PdmI	GAANNNNTTC	2 cut(s)	1020, 1572
PfeI	GAWTC	7 cut(s)	296, 398, 1033, 1280, 1401, 1736, 1780
PflMI	CCANNNNNTGG	4 cut(s)	385, 530, 560, 1253
PfoI	TCCNGGA	1 cut(s)	1183
PinAI	ACCGGT	1 cut(s)	41
PkrI	GCNGC	7 cut(s)	873, 1143, 1805, 1808, 2069, 2086, 2089
PleI	GAGTC	2 cut(s)	834, 2010
PpsI	GAGTC	2 cut(s)	834, 2010
PscI	ACATGT	1 cut(s)	1610
Psp6I	CCWGG	6 cut(s)	201, 496, 518, 1425, 1455, 1549
PspGI	CCWGG	6 cut(s)	201, 496, 518, 1425, 1455, 1549
PspN4I	GGNNCC	2 cut(s)	1242, 1522
PspPI	GGNCC	3 cut(s)	494, 635, 1520
PstI	CTGCAG	1 cut(s)	876
PsuI	RGATCY	2 cut(s)	1180, 1262
PvuII	CAGCTG	1 cut(s)	1806
RsaI	GTAC	4 cut(s)	40, 200, 927, 1615
RsaNI	GTAC	4 cut(s)	39, 199, 926, 1614
RseI	CAYNNNNRTG	4 cut(s)	789, 1222, 1615, 1887
SalI	GTCGAC	1 cut(s)	1343
SaqAI	TTAA	3 cut(s)	266, 338, 539
SatI	GCNGC	7 cut(s)	872, 1142, 1804, 1807, 2068, 2085, 2088
Sau3AI	GATC	6 cut(s)	304, 533, 694, 1180, 1262, 1861
Sau96I	GGNCC	3 cut(s)	494, 635, 1520
SchI	GAGTC	2 cut(s)	835, 2011
ScrFI	CCNGG	7 cut(s)	203, 498, 520, 1185, 1427, 1457, 1551
SduI	GDGCHC	4 cut(s)	1245, 1306, 1376, 1878
SfaNI	GCATC	4 cut(s)	161, 931, 1226, 1441
SfcI	CTRYAG	1 cut(s)	872
SinI	GGWCC	1 cut(s)	1520
SmiMI	CAYNNNNRTG	4 cut(s)	789, 1222, 1615, 1887
SmlI	CTYRAG	1 cut(s)	760
SmoI	CTYRAG	1 cut(s)	760
SseBI	AGGCCT	1 cut(s)	1020
SsiI	CCGC	4 cut(s)	72, 1330, 1587, 2087
SspMI	CTAG	2 cut(s)	1461, 1467
StuI	AGGCCT	1 cut(s)	1020
StyD4I	CCNGG	7 cut(s)	201, 496, 518, 1183, 1425, 1455, 1549
StyI	CCWWGG	2 cut(s)	479, 851
TaaI	ACNGT	7 cut(s)	167, 257, 319, 1134, 1162, 1636, 2035
TaiI	ACGT	6 cut(s)	1064, 1350, 1373, 1626, 1693, 1833
TaqI	TCGA	4 cut(s)	841, 918, 949, 1344
TatI	WGTACW	1 cut(s)	1613
TauI	GCSGC	1 cut(s)	2090
TfiI	GAWTC	7 cut(s)	296, 398, 1033, 1280, 1401, 1736, 1780
Tru1I	TTAA	3 cut(s)	266, 338, 539
Tru9I	TTAA	3 cut(s)	266, 338, 539
TscAI	CASTG	1 cut(s)	170
TseFI	GTSAC	1 cut(s)	1162
TseI	GCWGC	6 cut(s)	871, 1141, 1803, 1806, 2067, 2084
Tsp45I	GTSAC	1 cut(s)	1162
TspGWI	ACGGA	1 cut(s)	2068
TspRI	CASTG	1 cut(s)	170
Van91I	CCANNNNNTGG	4 cut(s)	385, 530, 560, 1253
VpaK11BI	GGWCC	1 cut(s)	1520
XagI	CCTNNNNNAGG	1 cut(s)	810
XapI	RAATTY	6 cut(s)	88, 678, 735, 895, 1381, 1818
XceI	RCATGY	4 cut(s)	981, 1614, 1620, 1756
XmiI	GTMKAC	1 cut(s)	1344
XmnI	GAANNNNTTC	2 cut(s)	1020, 1572
XspI	CTAG	2 cut(s)	1461, 1467
Zsp2I	ATGCAT	1 cut(s)	176

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.