Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb3

Orthogroup ID

OG0010493

Physical Location & Seq

Genomic Coordinates Forward (+)

35900403 .. 35906809

Gene Structure 6407 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_3g42960.t3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1725 bp

ATGTTGGGAAACACTTCTATCCAGTTGCGCGCTCCAAAAGGAGGACAAATTTTACGTTTGAGCACAGCACCAATGGCGCAGGTCTTCTCTTTCCATGTCTTTCTATCTGCAGAGACCCACCGGCCTTCTTCATCTTCTTCGTCTTCTTCCAAGTCACTCAAGTTTGAACAGAGAACAAAGACATCCATTTCTGCACCCAGAAAAGGCAATTTTAATCCTTCACGCAAAACCCAGAAGCTGGATTCCGAGGTCTCTACTCACAGAGGTGGTCAGTTCAATCCATCACGAAAAACCCAGAAGCTAAATTCAGAAATTTCTCCTCACAGAGCGGTTTCTGCTGTGAGACTGATGAGAATAGAGATGGGAGGTGCTTTTGCTGATCTGCTCAATGAGAGAGGGAAGGGCTCTGGTGAAAATGAGATGGGATATGTTGAAAGAACTTTAGGGTTTCGCACACGGGATTTGGAGGACCGCGATCTTAGACTGGTCACTGATATTGTTGGAGGCACCATACGTTGGAAGCGATATCTTGATCATTTGATCAGTTCAATATGTCGTGATGCAAACACATTTAGCAGGATGGAACCACTTCTTTTACAGATTCTCCGAATTGGTTTCTACGAGATTGTCAAGCTTAATATGCCACCATATGCTGTTGTGGATGAGAATGTGAGGCTTGCAAAAATTGCCCTTAGACATGGTGCTGGCAACATGGTCAATGGGATTCTCCGGAAGCTTGTTTTACTTAAGGAAAGTAACTCTCTTCCTCTACCCAAAGTGGAGGGTGATGATCGCACACAAGCACGTGCTCTTGCCACTCTGTACTCTCATCCTGTATGGATGGTAAGGCGATGGACAAAGCATCTGGGACAAGAAGAAACAATTAGATTGATGACATGGAATAATAGTGATCCTAGTTTCAGCTTAAGGGCAAATAGTGGGAAAGGTATTTCAAGAGCTGACCTTGTGACAAAGCTTAATTTATTGAAGGTCCCACATGAAATCTCTTCGCATTTGAATGATTTTGTCCGTATGAAAAAAGGGTTGCAGATTGTAATTCAGGCTGGTTTGCTAAAAGAGGGTTTATGTTCAGTACAGGATGAGAGTGCAGGTCTGGTAGTTTCTGTTGTAGATCCTCAACAGGGTGAAAGCATTATTGATTGCTGTGCTGCTCCTGGAGGAAAGACTCTTTACATGGCGTCTCTTTTGAGTGGCCAAGGTATGGTATACGCAATTGACATAAATGAAGGGCGGCTGAGAATCCTCAAAGAAACAGCTAAGTTGCACCAAGTAGATGGTGTCATCACAACTATCCATGCTGATATGCGTAGTTATGCTGACAACAATACAATGAAGTGTGACAAAGTTCTGTTGGATGCTCCATGTTCTGGACTCGGTGTACTCTCCAAGAGGGCAGACTTGCGTTGGAACAGGAGATTAGAGGACATGGAAGAGCTCAAGAATTTGCAGGATCAGCTCCTTGATGCAGCTACTCAATTGGTCAAGCCTGGTGGAGTGTTAGTATACAGCACTTGCTCCATAGATCCGGAAGAGAATGAAGAGAGAATTGCTGCATTTCTTCTCAGGCATCCCTATTTTTGTGTAGATCCTGCTGACAAATATGTTCCATCTGAATTCGTAACGGAGCATGGTTTCTATTCCTCCAACCCTGTGAAACATTCCCTGGATGGGGCCTTTGCTGCTCGTTTAAGTCGAGCTTTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000154 GO:0001510 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006139 GO:0006364 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008168 GO:0008169 GO:0008173 GO:0008649 GO:0008757 GO:0009383 GO:0009451 GO:0009987 GO:0010467 GO:0016070 GO:0016072 GO:0016434 GO:0016740 GO:0016741 GO:0022613 GO:0031167 GO:0032259 GO:0034470 GO:0034641 GO:0034660 GO:0042254 GO:0043170 GO:0043412 GO:0043414 GO:0044085 GO:0044237 GO:0044238 GO:0044260 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0070475 GO:0071704 GO:0071840 GO:0090304 GO:0140098 GO:0140102 GO:1901360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Methyltr_RsmB-F NusB

Protein Analysis

575

Amino Acids

63.88

Weight (kDa)

9.31

Isoelectric Point (pI)

39.36

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
NusB	PF01029	139 - 246	1e-22	NusB family
RsmF-B_ferredox	PF22458	279 - 349	7.4e-07	Methyltr_RsmF/B-like, ferredoxin-like domain
Methyltr_RsmB-F	PF01189	375 - 569	1.1e-52	16S rRNA methyltransferase RsmB/F
TRM5-TYW2_MTfase	PF02475	379 - 462	1e-06	TRM5/TYW2 methyltransferase domain
FtsJ	PF01728	380 - 515	2.6e-08	FtsJ-like methyltransferase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0010493)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G13180
fragaria_vesca	FvH4_3g42960 FvH4_3g42960 FvH4_3g42960 FvH4_3g42960 FvH4_3g42960 FvH4_3g43190
malus_domestica	MD03G1027000.v1.1
prunus_persica	Prupe.6G024300_v2.0.a1 Prupe.6G024300_v2.0.a1
rosa_chinensis	RchiOBHm_Chr5g0077011
rosa_multiflora	Rmu_sc0003323.1_g000006 Rmu_sc0038050.1_g000001
rosa_roxburghii	Rroxscaffold_1G00005130
rosa_rugosa	Rorug05G0450200 Rorug05G0450300.1
rosa_samantha	Rh5AG504900 Rh5BG526600 Rh5CG550400 Rh5DG538800
rosa_wichuraiana	Rw5G047150

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	70, 1100
AccB1I	GGYRCC	1 cut(s)	506
AccB7I	CCANNNNNTGG	4 cut(s)	238, 516, 1222, 1388
AccBSI	CCGCTC	1 cut(s)	329
AccI	GTMKAC	2 cut(s)	1227, 1524
AccII	CGCG	2 cut(s)	30, 474
AccIII	TCCGGA	2 cut(s)	729, 1546
AciI	CCGC	3 cut(s)	329, 472, 1252
AclWI	GGATC	5 cut(s)	905, 1127, 1479, 1538, 1601
AcoI	YGGCCR	1 cut(s)	1213
AcsI	RAATTY	5 cut(s)	48, 304, 312, 1462, 1634
AcvI	CACGTG	1 cut(s)	806
AcyI	GRCGYC	1 cut(s)	1199
AfaI	GTAC	3 cut(s)	824, 1095, 1401
AfiI	CCNNNNNNNGG	9 cut(s)	41, 203, 238, 516, 1142, 1222, 1388, 1689, 1690
AflII	CTTAAG	2 cut(s)	746, 925
AgsI	TTSAA	7 cut(s)	167, 277, 434, 549, 954, 988, 1018
AjnI	CCWGG	3 cut(s)	1174, 1507, 1683
AleI	CACNNNNGTG	1 cut(s)	264
Alw21I	GWGCWC	3 cut(s)	65, 811, 1458
Alw26I	GTCTC	4 cut(s)	107, 256, 337, 1206
AlwI	GGATC	5 cut(s)	905, 1127, 1479, 1538, 1601
AlwNI	CAGNNNCTG	1 cut(s)	238
Aor13HI	TCCGGA	2 cut(s)	729, 1546
AoxI	GGCC	3 cut(s)	122, 1213, 1692
ApeKI	GCWGC	4 cut(s)	1169, 1487, 1571, 1700
ApoI	RAATTY	5 cut(s)	48, 304, 312, 1462, 1634
Asp700I	GAANNNNTTC	2 cut(s)	13, 588
AspLEI	GCGC	3 cut(s)	30, 32, 79
AspS9I	GGNCC	3 cut(s)	469, 991, 1692
AsuHPI	GGTGA	3 cut(s)	422, 797, 1157
AvaII	GGWCC	2 cut(s)	469, 991
BalI	TGGCCA	1 cut(s)	1215
BanI	GGYRCC	1 cut(s)	506
BanII	GRGCYC	2 cut(s)	407, 1458
BbrPI	CACGTG	1 cut(s)	806
BbsI	GAAGAC	2 cut(s)	76, 135
Bbv12I	GWGCWC	3 cut(s)	65, 811, 1458
BbvI	GCAGC	4 cut(s)	1156, 1499, 1558, 1687
BccI	CCATC	9 cut(s)	289, 355, 415, 574, 835, 846, 1289, 1636, 1682
BciT130I	CCWGG	3 cut(s)	1176, 1509, 1685
BclI	TGATCA	2 cut(s)	532, 540
BcoDI	GTCTC	4 cut(s)	107, 256, 337, 1206
BfaI	CTAG	1 cut(s)	915
BfmI	CTRYAG	1 cut(s)	108
BfrI	CTTAAG	2 cut(s)	746, 925
BfuAI	ACCTGC	2 cut(s)	70, 1100
BisI	GCNGC	5 cut(s)	1170, 1253, 1488, 1572, 1701
BlsI	GCNGC	5 cut(s)	1171, 1254, 1489, 1573, 1702
Bme1390I	CCNGG	3 cut(s)	1176, 1509, 1685
Bme18I	GGWCC	2 cut(s)	469, 991
BmgT120I	GGNCC	3 cut(s)	469, 991, 1692
BmiI	GGNNCC	4 cut(s)	508, 585, 993, 1693
BmrFI	CCNGG	3 cut(s)	1176, 1509, 1685
BmsI	GCATC	5 cut(s)	550, 871, 1366, 1474, 1597
BpiI	GAAGAC	2 cut(s)	76, 135
BpmI	CTGGAG	1 cut(s)	1197
BpuEI	CTTGAG	2 cut(s)	143, 1442
BsaAI	YACGTR	1 cut(s)	806
BsaHI	GRCGYC	1 cut(s)	1199
BsaI	GGTCTC	2 cut(s)	107, 256
BsaJI	CCNNGG	3 cut(s)	246, 1216, 1683
BsaWI	WCCGGW	2 cut(s)	729, 1546
BsaXI	ACNNNNNCTCC	4 cut(s)	588, 618, 1506, 1536
Bsc4I	CCNNNNNNNGG	9 cut(s)	41, 203, 238, 516, 1142, 1222, 1388, 1689, 1690
Bse118I	RCCGGY	1 cut(s)	120
Bse1I	ACTGG	2 cut(s)	22, 489
BseAI	TCCGGA	2 cut(s)	729, 1546
BseBI	CCWGG	3 cut(s)	1176, 1509, 1685
BseDI	CCNNGG	3 cut(s)	246, 1216, 1683
BseGI	GGATG	9 cut(s)	182, 585, 667, 829, 846, 1105, 1381, 1588, 1693
BseLI	CCNNNNNNNGG	9 cut(s)	41, 203, 238, 516, 1142, 1222, 1388, 1689, 1690
BseMII	CTCAG	2 cut(s)	1247, 1597
BseNI	ACTGG	2 cut(s)	22, 489
BsePI	GCGCGC	1 cut(s)	28
BseRI	GAGGAG	1 cut(s)	309
BseXI	GCAGC	4 cut(s)	1156, 1499, 1558, 1687
BsgI	GTGCAG	2 cut(s)	177, 1128
Bsh1236I	CGCG	2 cut(s)	30, 474
BshFI	GGCC	3 cut(s)	124, 1215, 1694
BshNI	GGYRCC	1 cut(s)	506
BsiHKAI	GWGCWC	3 cut(s)	65, 811, 1458
BsiSI	CCGG	3 cut(s)	121, 730, 1547
BslFI	GGGAC	2 cut(s)	882, 977
BslI	CCNNNNNNNGG	9 cut(s)	41, 203, 238, 516, 1142, 1222, 1388, 1689, 1690
BsmAI	GTCTC	4 cut(s)	107, 256, 337, 1206
BsmBI	CGTCTC	1 cut(s)	1206
BsmFI	GGGAC	2 cut(s)	882, 977
BsnI	GGCC	3 cut(s)	124, 1215, 1694
Bso31I	GGTCTC	2 cut(s)	107, 256
Bsp1286I	GDGCHC	4 cut(s)	65, 407, 811, 1458
Bsp13I	TCCGGA	2 cut(s)	729, 1546
BspACI	CCGC	3 cut(s)	329, 472, 1252
BspANI	GGCC	3 cut(s)	124, 1215, 1694
BspCNI	CTCAG	2 cut(s)	1248, 1596
BspEI	TCCGGA	2 cut(s)	729, 1546
BspFNI	CGCG	2 cut(s)	30, 474
BspLI	GGNNCC	4 cut(s)	508, 585, 993, 1693
BspMAI	CTGCAG	1 cut(s)	112
BspMI	ACCTGC	2 cut(s)	70, 1100
BspPI	GGATC	5 cut(s)	905, 1127, 1479, 1538, 1601
BspQI	GCTCTTC	1 cut(s)	1446
BspT107I	GGYRCC	1 cut(s)	506
BspTI	CTTAAG	2 cut(s)	746, 925
BspTNI	GGTCTC	2 cut(s)	107, 256
BsrBI	CCGCTC	1 cut(s)	329
BsrFI	RCCGGY	1 cut(s)	120
BsrI	ACTGG	2 cut(s)	22, 489
BssAI	RCCGGY	1 cut(s)	120
BssECI	CCNNGG	3 cut(s)	246, 1216, 1683
BssHII	GCGCGC	1 cut(s)	28
BssNAI	GTATAC	2 cut(s)	1228, 1525
BssNI	GRCGYC	1 cut(s)	1199
BssT1I	CCWWGG	1 cut(s)	1216
Bst1107I	GTATAC	2 cut(s)	1228, 1525
Bst2UI	CCWGG	3 cut(s)	1176, 1509, 1685
Bst6I	CTCTTC	5 cut(s)	768, 1012, 1446, 1545, 1554
BstACI	GRCGYC	1 cut(s)	1199
BstAFI	CTTAAG	2 cut(s)	746, 925
BstAPI	GCANNNNNTGC	1 cut(s)	686
BstBAI	YACGTR	1 cut(s)	806
BstC8I	GCNNGC	3 cut(s)	30, 678, 706
BstDEI	CTNAG	5 cut(s)	479, 692, 1256, 1278, 1583
BstF5I	GGATG	9 cut(s)	182, 585, 667, 829, 846, 1105, 1381, 1588, 1693
BstFNI	CGCG	2 cut(s)	30, 474
BstHHI	GCGC	3 cut(s)	30, 32, 79
BstMAI	GTCTC	4 cut(s)	107, 256, 337, 1206
BstMWI	GCNNNNNNNGC	6 cut(s)	74, 335, 640, 686, 1474, 1700
BstNI	CCWGG	3 cut(s)	1176, 1509, 1685
BstSCI	CCNGG	3 cut(s)	1174, 1507, 1683
BstSFI	CTRYAG	1 cut(s)	108
BstUI	CGCG	2 cut(s)	30, 474
BstV1I	GCAGC	4 cut(s)	1156, 1499, 1558, 1687
BstV2I	GAAGAC	2 cut(s)	76, 135
BstX2I	RGATCY	3 cut(s)	1132, 1543, 1606
BstXI	CCANNNNNNTGG	1 cut(s)	1295
BstYI	RGATCY	3 cut(s)	1132, 1543, 1606
BstZ17I	GTATAC	2 cut(s)	1228, 1525
BsuRI	GGCC	3 cut(s)	124, 1215, 1694
BtgZI	GCGATG	1 cut(s)	865
BtsCI	GGATG	9 cut(s)	182, 585, 667, 829, 846, 1105, 1381, 1588, 1693
BtsIMutI	CAGTG	1 cut(s)	489
BveI	ACCTGC	2 cut(s)	70, 1100
Cac8I	GCNNGC	3 cut(s)	30, 678, 706
CaiI	CAGNNNCTG	1 cut(s)	238
CfoI	GCGC	3 cut(s)	30, 32, 79
Cfr10I	RCCGGY	1 cut(s)	120
Cfr13I	GGNCC	3 cut(s)	469, 991, 1692
CseI	GACGC	1 cut(s)	1188
Csp6I	GTAC	3 cut(s)	823, 1094, 1400
CspCI	CAANNNNNGTGG	2 cut(s)	1492, 1527
CviQI	GTAC	3 cut(s)	823, 1094, 1400
DdeI	CTNAG	5 cut(s)	479, 692, 1256, 1278, 1583
EaeI	YGGCCR	1 cut(s)	1213
Eam1104I	CTCTTC	5 cut(s)	768, 1012, 1446, 1545, 1554
EarI	CTCTTC	5 cut(s)	768, 1012, 1446, 1545, 1554
Ecl136II	GAGCTC	1 cut(s)	1456
Eco130I	CCWWGG	1 cut(s)	1216
Eco24I	GRGCYC	2 cut(s)	407, 1458
Eco31I	GGTCTC	2 cut(s)	107, 256
Eco32I	GATATC	1 cut(s)	527
Eco47I	GGWCC	2 cut(s)	469, 991
Eco53kI	GAGCTC	1 cut(s)	1456
Eco72I	CACGTG	1 cut(s)	806
EcoICRI	GAGCTC	1 cut(s)	1456
EcoO109I	RGGNCCY	2 cut(s)	991, 1692
EcoRI	GAATTC	1 cut(s)	1634
EcoRII	CCWGG	3 cut(s)	1174, 1507, 1683
EcoRV	GATATC	1 cut(s)	527
EcoT14I	CCWWGG	1 cut(s)	1216
EcoT38I	GRGCYC	2 cut(s)	407, 1458
ErhI	CCWWGG	1 cut(s)	1216
Esp3I	CGTCTC	1 cut(s)	1206
FalI	AAGNNNNNCTT	1 cut(s)	1702
FaqI	GGGAC	2 cut(s)	882, 977
FauNDI	CATATG	1 cut(s)	649
FbaI	TGATCA	2 cut(s)	532, 540
FblI	GTMKAC	2 cut(s)	1227, 1524
Fnu4HI	GCNGC	5 cut(s)	1170, 1253, 1488, 1572, 1701
FokI	GGATG	9 cut(s)	169, 592, 674, 816, 853, 1112, 1388, 1575, 1700
FriOI	GRGCYC	2 cut(s)	407, 1458
Fsp4HI	GCNGC	5 cut(s)	1170, 1253, 1488, 1572, 1701
FspBI	CTAG	1 cut(s)	915
GlaI	GCGC	3 cut(s)	29, 31, 78
GluI	GCNGC	5 cut(s)	1170, 1253, 1488, 1572, 1701
GsuI	CTGGAG	1 cut(s)	1197
HaeIII	GGCC	3 cut(s)	124, 1215, 1694
HapII	CCGG	3 cut(s)	121, 730, 1547
HgaI	GACGC	1 cut(s)	1188
HhaI	GCGC	3 cut(s)	30, 32, 79
Hin1I	GRCGYC	1 cut(s)	1199
Hin6I	GCGC	3 cut(s)	28, 30, 77
HinP1I	GCGC	3 cut(s)	28, 30, 77
HindIII	AAGCTT	3 cut(s)	632, 734, 974
HinfI	GANTC	6 cut(s)	242, 601, 724, 1186, 1260, 1392
HpaII	CCGG	3 cut(s)	121, 730, 1547
HphI	GGTGA	3 cut(s)	422, 797, 1157
Hpy166II	GTNNAC	3 cut(s)	1228, 1400, 1525
Hpy188I	TCNGA	4 cut(s)	247, 310, 608, 1633
Hpy188III	TCNNGA	8 cut(s)	285, 530, 557, 730, 954, 1389, 1459, 1547
Hpy8I	GTNNAC	3 cut(s)	1228, 1400, 1525
HpyAV	CCTTC	5 cut(s)	135, 228, 394, 982, 1241
HpyCH4IV	ACGT	3 cut(s)	55, 514, 805
HpyF10VI	GCNNNNNNNGC	6 cut(s)	74, 335, 640, 686, 1474, 1700
HpyF3I	CTNAG	5 cut(s)	479, 692, 1256, 1278, 1583
HpySE526I	ACGT	3 cut(s)	55, 514, 805
Hsp92I	GRCGYC	1 cut(s)	1199
HspAI	GCGC	3 cut(s)	28, 30, 77
Kpn2I	TCCGGA	2 cut(s)	729, 1546
Ksp22I	TGATCA	2 cut(s)	532, 540
LguI	GCTCTTC	1 cut(s)	1446
LmnI	GCTCC	6 cut(s)	37, 1177, 1384, 1482, 1541, 1645
Lsp1109I	GCAGC	4 cut(s)	1156, 1499, 1558, 1687
LweI	GCATC	5 cut(s)	550, 871, 1366, 1474, 1597
MaeI	CTAG	1 cut(s)	915
MaeII	ACGT	3 cut(s)	55, 514, 805
MaeIII	GTNAC	6 cut(s)	153, 487, 755, 967, 1358, 1639
MbiI	CCGCTC	1 cut(s)	329
MfeI	CAATTG	2 cut(s)	1233, 1496
MflI	RGATCY	3 cut(s)	1132, 1543, 1606
MhlI	GDGCHC	4 cut(s)	65, 407, 811, 1458
MlsI	TGGCCA	1 cut(s)	1215
MluNI	TGGCCA	1 cut(s)	1215
MlyI	GAGTC	2 cut(s)	1180, 1386
MmeI	TCCRAC	5 cut(s)	481, 497, 1353, 1406, 1689
Mox20I	TGGCCA	1 cut(s)	1215
MroI	TCCGGA	2 cut(s)	729, 1546
MroXI	GAANNNNTTC	2 cut(s)	13, 588
MscI	TGGCCA	1 cut(s)	1215
MseI	TTAA	6 cut(s)	213, 636, 747, 926, 978, 1709
MslI	CAYNNNNRTG	2 cut(s)	264, 1017
Msp20I	TGGCCA	1 cut(s)	1215
MspCI	CTTAAG	2 cut(s)	746, 925
MspI	CCGG	3 cut(s)	121, 730, 1547
MspR9I	CCNGG	3 cut(s)	1176, 1509, 1685
MunI	CAATTG	2 cut(s)	1233, 1496
MvaI	CCWGG	3 cut(s)	1176, 1509, 1685
MvnI	CGCG	2 cut(s)	30, 474
MwoI	GCNNNNNNNGC	6 cut(s)	74, 335, 640, 686, 1474, 1700
NdeI	CATATG	1 cut(s)	649
NlaIV	GGNNCC	4 cut(s)	508, 585, 993, 1693
NmuCI	GTSAC	4 cut(s)	153, 487, 967, 1358
OliI	CACNNNNGTG	1 cut(s)	264
PauI	GCGCGC	1 cut(s)	28
PciSI	GCTCTTC	1 cut(s)	1446
PcsI	WCGNNNNNNNCGW	2 cut(s)	520, 1711
PdmI	GAANNNNTTC	2 cut(s)	13, 588
PfeI	GAWTC	4 cut(s)	242, 601, 724, 1260
PflMI	CCANNNNNTGG	4 cut(s)	238, 516, 1222, 1388
PfoI	TCCNGGA	1 cut(s)	1174
PkrI	GCNGC	5 cut(s)	1171, 1254, 1489, 1573, 1702
PleI	GAGTC	2 cut(s)	1180, 1386
PmaCI	CACGTG	1 cut(s)	806
PmlI	CACGTG	1 cut(s)	806
PpsI	GAGTC	2 cut(s)	1180, 1386
Ppu21I	YACGTR	1 cut(s)	806
PpuMI	RGGWCCY	1 cut(s)	991
Psp124BI	GAGCTC	1 cut(s)	1458
Psp5II	RGGWCCY	1 cut(s)	991
Psp6I	CCWGG	3 cut(s)	1174, 1507, 1683
PspCI	CACGTG	1 cut(s)	806
PspGI	CCWGG	3 cut(s)	1174, 1507, 1683
PspN4I	GGNNCC	4 cut(s)	508, 585, 993, 1693
PspPI	GGNCC	3 cut(s)	469, 991, 1692
PspPPI	RGGWCCY	1 cut(s)	991
PstI	CTGCAG	1 cut(s)	112
PstNI	CAGNNNCTG	1 cut(s)	238
PsuI	RGATCY	3 cut(s)	1132, 1543, 1606
PteI	GCGCGC	1 cut(s)	28
RsaI	GTAC	3 cut(s)	824, 1095, 1401
RsaNI	GTAC	3 cut(s)	823, 1094, 1400
RseI	CAYNNNNRTG	2 cut(s)	264, 1017
SacI	GAGCTC	1 cut(s)	1458
SapI	GCTCTTC	1 cut(s)	1446
SaqAI	TTAA	6 cut(s)	213, 636, 747, 926, 978, 1709
SatI	GCNGC	5 cut(s)	1170, 1253, 1488, 1572, 1701
Sau96I	GGNCC	3 cut(s)	469, 991, 1692
SchI	GAGTC	2 cut(s)	1180, 1386
ScrFI	CCNGG	3 cut(s)	1176, 1509, 1685
SduI	GDGCHC	4 cut(s)	65, 407, 811, 1458
SfaNI	GCATC	5 cut(s)	550, 871, 1366, 1474, 1597
SfcI	CTRYAG	1 cut(s)	108
SinI	GGWCC	2 cut(s)	469, 991
SmiMI	CAYNNNNRTG	2 cut(s)	264, 1017
SmlI	CTYRAG	4 cut(s)	158, 746, 925, 1457
SmoI	CTYRAG	4 cut(s)	158, 746, 925, 1457
SsiI	CCGC	3 cut(s)	329, 472, 1252
SspMI	CTAG	1 cut(s)	915
SstI	GAGCTC	1 cut(s)	1458
StyD4I	CCNGG	3 cut(s)	1174, 1507, 1683
StyI	CCWWGG	1 cut(s)	1216
TaiI	ACGT	3 cut(s)	58, 517, 808
TaqI	TCGA	1 cut(s)	1714
TatI	WGTACW	3 cut(s)	822, 1093, 1399
TauI	GCSGC	1 cut(s)	1255
TfiI	GAWTC	4 cut(s)	242, 601, 724, 1260
Tru1I	TTAA	6 cut(s)	213, 636, 747, 926, 978, 1709
Tru9I	TTAA	6 cut(s)	213, 636, 747, 926, 978, 1709
TscAI	CASTG	1 cut(s)	496
TseFI	GTSAC	4 cut(s)	153, 487, 967, 1358
TseI	GCWGC	4 cut(s)	1169, 1487, 1571, 1700
Tsp45I	GTSAC	4 cut(s)	153, 487, 967, 1358
TspDTI	ATGAA	6 cut(s)	120, 1014, 1049, 1260, 1367, 1572
TspGWI	ACGGA	2 cut(s)	1019, 1658
TspRI	CASTG	1 cut(s)	496
Van91I	CCANNNNNTGG	4 cut(s)	238, 516, 1222, 1388
Vha464I	CTTAAG	2 cut(s)	746, 925
VpaK11BI	GGWCC	2 cut(s)	469, 991
XapI	RAATTY	5 cut(s)	48, 304, 312, 1462, 1634
XmiI	GTMKAC	2 cut(s)	1227, 1524
XmnI	GAANNNNTTC	2 cut(s)	13, 588
XspI	CTAG	1 cut(s)	915

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.