Prupe.6G024300_v2.0.a1
ERF Family

Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB NOP family

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
Physical Location & Seq
Reverse (-)
1942739 .. 1949178
6440 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G024300.1

Sequence Viewer

Length: 1578 bp
ATGGCACAAGTGCTCTCTCTCGGTGTGCTTCTCTCTGCGGAGACCAACAGAAGTTCTTTTTCTTCTAAGTCCCTGAAATTGGATAAGAGAACAAAGACATCCATTTCTGCTCCTAGGAAAGGTAAGTTGAATCCCTCACACAAAACCCAGAAGGTGAATTTGGAGATTTCTCCTCACAGAGCTGTTTCTGCAGTGAGATTGATGAGAATAGAGATGGGAGGTGCTTTTGCTGATCTTCTCAATGAGAAAGGCAAGGGTTCTGGTGCAAATGAGATGGGATATGTAGGAAGAACTCTTGGGTTTCGCACACGGGATTTAGAGGATCGTGATCTTAGATTGGTCACTGATATTGTTGGAGGTACAATCCGCTGGAAGAGATATCTTGATCATTTGATTAGTTCACTGTGTCATGATGCAAACACATTTACCAGGATGGAACCACTTCTTTTGCAGATTCTCCGGATTGGTTTCTATGAGATTATTAAGCTGGATATGCCACCATATGCTGTTGTAGATGAGAATGTGAGGCTTGCAAAAGTTGCCCTTAGACATGGTGCTGGCAACATGGTCAATGCAATTCTCAGGAAGCTTGTTCTTCATATGGAAAATAGCTCTCTTCCTCTACCCAAATTGGAGGGTGATGATCGCACACAAGCACGTGCTCTTGCCACTCTGCACTCTCATCCAGTTTGGATGGTAAGGCGGTGGACAAAGCATCTTGGACAAGAAGAAGCAATTAGATTAATGATGTGGAATAACAGTGATCCTAGTTTCAGCTTAAGGGCAAACAGTGGGAAAGGTGTTTCAAGAGCTGACCTTGTGACGAAGCTTGATGTGTTAAAGGTTCCGCACGAGCTCTCTTTTTATTTGAATGATTTCGTCCGTATGAAAACAGGGTTGCAGATGGTCATACAAGCTGGTCTATTGAAAGAAGGTTTATGCTCAGTTCAGGATGAGAGTGCAGGTCTGGTAGTTTCTGTTGTAGATCCTCAACCGGGTGAAAGCATTGTTGATTGTTGTGCTGCTCCTGGAGGAAAGACTCTTTACATGGCATCCCTTTTGAGTGGCAAAGGTATGGTACATGCAGTTGACATAAATGAAGGCCGGTTGAGAATCCTCAAAGAGACCGCTAAGTTGCACCAAGTAGATGATGTCATCACCACTATCCATGCAGATTTCCGTACTTTTTCTGACAATAATACTATGAAGTGTGATAAAGTTCTGTTGGATGCTCCATGCTCTGGATTGGGTGTTCTCTCTAAGAGAGCAGACTTGCGTTGGAACAGGAAATTAGAGGATATGGAGCAGCTTAAGAATTTGCAGGATGAGCTCCTTGATGCAGCTTCCCTATTGGTCAAGCCTGGTGGAGTTTTAGTATACAGTACCTGCTCTATAGATCCAGAAGAGAATGAAGAGAGGATAGCTGCATTTCTTCTCAGGCATCCAGATTTTTGCATAGATCCTATTGGCAGATATGTTCCACCTGATTTTGTAACGGAGCATGGTTTCTATTTCTCCAACCCTGTAAAGCATTTCCTTGATGGGGCATTTGCTGCTCGTTTAAGCCGAGCTATATAA

Protein Analysis

526

Amino Acids

58.4

Weight (kDa)

8.85

Isoelectric Point (pI)

33.73

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 953, 1394
AccB7I CCANNNNNTGG 1 cut(s) 1241
AccI GTMKAC 1 cut(s) 1377
AccIII TCCGGA 1 cut(s) 459
AciI CCGC 5 cut(s) 38, 367, 703, 848, 1128
AclWI GGATC 5 cut(s) 330, 758, 980, 1391, 1454
AcsI RAATTY 2 cut(s) 157, 1315
AcvI CACGTG 1 cut(s) 659
AfaI GTAC 4 cut(s) 361, 1080, 1183, 1384
AfiI CCNNNNNNNGG 5 cut(s) 79, 119, 995, 1241, 1543
AflII CTTAAG 2 cut(s) 778, 1310
AgsI TTSAA 4 cut(s) 130, 807, 871, 928
AjnI CCWGG 3 cut(s) 428, 1027, 1360
AjuI GAANNNNNNNTTGG 2 cut(s) 143, 175
AloI GAACNNNNNNTCC 2 cut(s) 1236, 1268
Alw21I GWGCWC 4 cut(s) 15, 664, 858, 1332
Alw26I GTCTC 2 cut(s) 35, 1118
AlwI GGATC 5 cut(s) 330, 758, 980, 1391, 1454
AlwNI CAGNNNCTG 1 cut(s) 1386
Aor13HI TCCGGA 1 cut(s) 459
AoxI GGCC 1 cut(s) 1102
ApeKI GCWGC 5 cut(s) 1022, 1306, 1340, 1424, 1553
ApoI RAATTY 2 cut(s) 157, 1315
AseI ATTAAT 1 cut(s) 743
Asp700I GAANNNNTTC 2 cut(s) 441, 875
AspA2I CCTAGG 1 cut(s) 113
AsuC2I CCSGG 1 cut(s) 996
AsuHPI GGTGA 4 cut(s) 166, 650, 1010, 1150
AvrII CCTAGG 1 cut(s) 113
BanII GRGCYC 2 cut(s) 858, 1332
BauI CACGAG 1 cut(s) 851
BbrPI CACGTG 1 cut(s) 659
Bbv12I GWGCWC 4 cut(s) 15, 664, 858, 1332
BbvI GCAGC 5 cut(s) 1009, 1318, 1352, 1411, 1540
BccI CCATC 6 cut(s) 208, 268, 427, 688, 898, 1535
BciT130I CCWGG 3 cut(s) 430, 1029, 1362
BclI TGATCA 1 cut(s) 385
BcnI CCSGG 1 cut(s) 996
BcoDI GTCTC 2 cut(s) 35, 1118
BfaI CTAG 2 cut(s) 114, 768
BfmI CTRYAG 2 cut(s) 189, 1392
BfrI CTTAAG 2 cut(s) 778, 1310
BfuAI ACCTGC 2 cut(s) 953, 1394
BisI GCNGC 5 cut(s) 1023, 1307, 1341, 1425, 1554
BlnI CCTAGG 1 cut(s) 113
BlsI GCNGC 5 cut(s) 1024, 1308, 1342, 1426, 1555
Bme1390I CCNGG 4 cut(s) 430, 996, 1029, 1362
BmiI GGNNCC 2 cut(s) 438, 846
BmrFI CCNGG 4 cut(s) 430, 996, 1029, 1362
BmsI GCATC 6 cut(s) 403, 724, 1061, 1219, 1327, 1450
BpmI CTGGAG 1 cut(s) 1050
BpuMI CCSGG 1 cut(s) 996
BsaAI YACGTR 1 cut(s) 659
BsaBI GATNNNNATC 1 cut(s) 327
BsaI GGTCTC 2 cut(s) 35, 1118
BsaJI CCNNGG 1 cut(s) 113
BsaWI WCCGGW 1 cut(s) 459
BsaXI ACNNNNNCTCC 2 cut(s) 1359, 1389
Bsc4I CCNNNNNNNGG 5 cut(s) 79, 119, 995, 1241, 1543
Bse118I RCCGGY 1 cut(s) 1104
Bse1I ACTGG 1 cut(s) 686
Bse8I GATNNNNATC 1 cut(s) 327
BseAI TCCGGA 1 cut(s) 459
BseBI CCWGG 3 cut(s) 430, 1029, 1362
BseDI CCNNGG 1 cut(s) 113
BseGI GGATG 9 cut(s) 98, 438, 682, 699, 958, 1052, 1234, 1330, 1441
BseJI GATNNNNATC 1 cut(s) 327
BseLI CCNNNNNNNGG 5 cut(s) 79, 119, 995, 1241, 1543
BseMII CTCAG 3 cut(s) 595, 957, 1450
BseNI ACTGG 1 cut(s) 686
BseRI GAGGAG 1 cut(s) 162
BseXI GCAGC 5 cut(s) 1009, 1318, 1352, 1411, 1540
BsgI GTGCAG 2 cut(s) 659, 981
BshFI GGCC 1 cut(s) 1104
BsiHKAI GWGCWC 4 cut(s) 15, 664, 858, 1332
BsiSI CCGG 3 cut(s) 460, 995, 1105
BslFI GGGAC 1 cut(s) 55
BslI CCNNNNNNNGG 5 cut(s) 79, 119, 995, 1241, 1543
BsmAI GTCTC 2 cut(s) 35, 1118
BsmFI GGGAC 1 cut(s) 55
BsnI GGCC 1 cut(s) 1104
Bso31I GGTCTC 2 cut(s) 35, 1118
Bsp1286I GDGCHC 4 cut(s) 15, 664, 858, 1332
Bsp13I TCCGGA 1 cut(s) 459
Bsp143I GATC 9 cut(s) 232, 322, 328, 385, 643, 763, 985, 1396, 1459
BspACI CCGC 5 cut(s) 38, 367, 703, 848, 1128
BspANI GGCC 1 cut(s) 1104
BspCNI CTCAG 3 cut(s) 594, 956, 1449
BspEI TCCGGA 1 cut(s) 459
BspHI TCATGA 1 cut(s) 409
BspLI GGNNCC 2 cut(s) 438, 846
BspMAI CTGCAG 1 cut(s) 193
BspMI ACCTGC 2 cut(s) 953, 1394
BspPI GGATC 5 cut(s) 330, 758, 980, 1391, 1454
BspTI CTTAAG 2 cut(s) 778, 1310
BspTNI GGTCTC 2 cut(s) 35, 1118
BsrFI RCCGGY 1 cut(s) 1104
BsrI ACTGG 1 cut(s) 686
BssAI RCCGGY 1 cut(s) 1104
BssECI CCNNGG 1 cut(s) 113
BssMI GATC 9 cut(s) 232, 322, 328, 385, 643, 763, 985, 1396, 1459
BssNAI GTATAC 1 cut(s) 1378
BssSI CACGAG 1 cut(s) 851
BssT1I CCWWGG 1 cut(s) 113
Bst1107I GTATAC 1 cut(s) 1378
Bst2BI CACGAG 1 cut(s) 851
Bst2UI CCWGG 3 cut(s) 430, 1029, 1362
Bst4CI ACNGT 4 cut(s) 405, 761, 791, 1382
Bst6I CTCTTC 4 cut(s) 368, 621, 1398, 1407
BstAFI CTTAAG 2 cut(s) 778, 1310
BstAPI GCANNNNNTGC 2 cut(s) 539, 1553
BstBAI YACGTR 1 cut(s) 659
BstC8I GCNNGC 2 cut(s) 531, 559
BstDEI CTNAG 8 cut(s) 66, 332, 545, 581, 943, 1131, 1260, 1436
BstENI CCTNNNNNAGG 1 cut(s) 117
BstF5I GGATG 9 cut(s) 98, 438, 682, 699, 958, 1052, 1234, 1330, 1441
BstKTI GATC 9 cut(s) 235, 325, 331, 388, 646, 766, 988, 1399, 1462
BstMAI GTCTC 2 cut(s) 35, 1118
BstMBI GATC 9 cut(s) 232, 322, 328, 385, 643, 763, 985, 1396, 1459
BstMWI GCNNNNNNNGC 5 cut(s) 188, 493, 539, 1327, 1553
BstNI CCWGG 3 cut(s) 430, 1029, 1362
BstNSI RCATGY 1 cut(s) 1085
BstSCI CCNGG 4 cut(s) 428, 994, 1027, 1360
BstSFI CTRYAG 2 cut(s) 189, 1392
BstV1I GCAGC 5 cut(s) 1009, 1318, 1352, 1411, 1540
BstX2I RGATCY 3 cut(s) 985, 1396, 1459
BstYI RGATCY 3 cut(s) 985, 1396, 1459
BstZ17I GTATAC 1 cut(s) 1378
BsuRI GGCC 1 cut(s) 1104
BtsCI GGATG 9 cut(s) 98, 438, 682, 699, 958, 1052, 1234, 1330, 1441
BtsI GCAGTG 1 cut(s) 198
BtsIMutI CAGTG 5 cut(s) 198, 342, 401, 766, 796
BveI ACCTGC 2 cut(s) 953, 1394
Cac8I GCNNGC 2 cut(s) 531, 559
CaiI CAGNNNCTG 1 cut(s) 1386
CciI TCATGA 1 cut(s) 409
Cfr10I RCCGGY 1 cut(s) 1104
Csp6I GTAC 4 cut(s) 360, 1079, 1182, 1383
CspCI CAANNNNNGTGG 4 cut(s) 429, 464, 1345, 1380
CviAII CATG 8 cut(s) 410, 551, 565, 1048, 1082, 1169, 1236, 1502
CviQI GTAC 4 cut(s) 360, 1079, 1182, 1383
DdeI CTNAG 8 cut(s) 66, 332, 545, 581, 943, 1131, 1260, 1436
DpnI GATC 9 cut(s) 234, 324, 330, 387, 645, 765, 987, 1398, 1461
DpnII GATC 9 cut(s) 232, 322, 328, 385, 643, 763, 985, 1396, 1459
Eam1104I CTCTTC 4 cut(s) 368, 621, 1398, 1407
EarI CTCTTC 4 cut(s) 368, 621, 1398, 1407
Ecl136II GAGCTC 2 cut(s) 856, 1330
Eco130I CCWWGG 1 cut(s) 113
Eco24I GRGCYC 2 cut(s) 858, 1332
Eco31I GGTCTC 2 cut(s) 35, 1118
Eco32I GATATC 1 cut(s) 380
Eco53kI GAGCTC 2 cut(s) 856, 1330
Eco72I CACGTG 1 cut(s) 659
EcoICRI GAGCTC 2 cut(s) 856, 1330
EcoNI CCTNNNNNAGG 1 cut(s) 117
EcoRII CCWGG 3 cut(s) 428, 1027, 1360
EcoRV GATATC 1 cut(s) 380
EcoT14I CCWWGG 1 cut(s) 113
EcoT38I GRGCYC 2 cut(s) 858, 1332
ErhI CCWWGG 1 cut(s) 113
FaeI CATG 8 cut(s) 413, 554, 568, 1051, 1085, 1172, 1239, 1505
FalI AAGNNNNNCTT 2 cut(s) 528, 560
FaqI GGGAC 1 cut(s) 55
FatI CATG 8 cut(s) 409, 550, 564, 1047, 1081, 1168, 1235, 1501
FauNDI CATATG 2 cut(s) 502, 600
FbaI TGATCA 1 cut(s) 385
FblI GTMKAC 1 cut(s) 1377
Fnu4HI GCNGC 5 cut(s) 1023, 1307, 1341, 1425, 1554
FokI GGATG 9 cut(s) 85, 445, 669, 706, 965, 1039, 1241, 1337, 1428
FriOI GRGCYC 2 cut(s) 858, 1332
Fsp4HI GCNGC 5 cut(s) 1023, 1307, 1341, 1425, 1554
FspBI CTAG 2 cut(s) 114, 768
GluI GCNGC 5 cut(s) 1023, 1307, 1341, 1425, 1554
GsuI CTGGAG 1 cut(s) 1050
HaeIII GGCC 1 cut(s) 1104
HapII CCGG 3 cut(s) 460, 995, 1105
Hin1II CATG 8 cut(s) 413, 554, 568, 1051, 1085, 1172, 1239, 1505
HincII GTYRAC 1 cut(s) 1090
HindII GTYRAC 1 cut(s) 1090
HindIII AAGCTT 2 cut(s) 587, 827
HinfI GANTC 4 cut(s) 130, 454, 1039, 1113
HpaII CCGG 3 cut(s) 460, 995, 1105
HphI GGTGA 4 cut(s) 166, 650, 1010, 1150
Hpy166II GTNNAC 4 cut(s) 401, 708, 1090, 1378
Hpy188I TCNGA 1 cut(s) 1192
Hpy8I GTNNAC 4 cut(s) 401, 708, 1090, 1378
HpyAV CCTTC 3 cut(s) 145, 926, 1094
HpyCH4III ACNGT 4 cut(s) 405, 761, 791, 1382
HpyCH4IV ACGT 1 cut(s) 658
HpyF10VI GCNNNNNNNGC 5 cut(s) 188, 493, 539, 1327, 1553
HpyF3I CTNAG 8 cut(s) 66, 332, 545, 581, 943, 1131, 1260, 1436
HpySE526I ACGT 1 cut(s) 658
Hsp92II CATG 8 cut(s) 413, 554, 568, 1051, 1085, 1172, 1239, 1505
Kpn2I TCCGGA 1 cut(s) 459
Ksp22I TGATCA 1 cut(s) 385
Kzo9I GATC 9 cut(s) 232, 322, 328, 385, 643, 763, 985, 1396, 1459
LmnI GCTCC 6 cut(s) 115, 1030, 1237, 1303, 1335, 1498
Lsp1109I GCAGC 5 cut(s) 1009, 1318, 1352, 1411, 1540
LweI GCATC 6 cut(s) 403, 724, 1061, 1219, 1327, 1450
MaeI CTAG 2 cut(s) 114, 768
MaeII ACGT 1 cut(s) 658
MaeIII GTNAC 3 cut(s) 340, 820, 1492
MalI GATC 9 cut(s) 234, 324, 330, 387, 645, 765, 987, 1398, 1461
MboI GATC 9 cut(s) 232, 322, 328, 385, 643, 763, 985, 1396, 1459
MflI RGATCY 3 cut(s) 985, 1396, 1459
MhlI GDGCHC 4 cut(s) 15, 664, 858, 1332
MluCI AATT 7 cut(s) 77, 157, 576, 629, 735, 1289, 1315
MlyI GAGTC 1 cut(s) 1033
MmeI TCCRAC 4 cut(s) 334, 1206, 1259, 1542
MroI TCCGGA 1 cut(s) 459
MroXI GAANNNNTTC 2 cut(s) 441, 875
MseI TTAA 6 cut(s) 483, 743, 779, 839, 1311, 1562
MspA1I CMGCKG 1 cut(s) 369
MspCI CTTAAG 2 cut(s) 778, 1310
MspI CCGG 3 cut(s) 460, 995, 1105
MspR9I CCNGG 4 cut(s) 430, 996, 1029, 1362
MvaI CCWGG 3 cut(s) 430, 1029, 1362
MwoI GCNNNNNNNGC 5 cut(s) 188, 493, 539, 1327, 1553
NciI CCSGG 1 cut(s) 996
NdeI CATATG 2 cut(s) 502, 600
NdeII GATC 9 cut(s) 232, 322, 328, 385, 643, 763, 985, 1396, 1459
NlaIII CATG 8 cut(s) 413, 554, 568, 1051, 1085, 1172, 1239, 1505
NlaIV GGNNCC 2 cut(s) 438, 846
NmuCI GTSAC 2 cut(s) 340, 820
NspI RCATGY 1 cut(s) 1085
PagI TCATGA 1 cut(s) 409
PcsI WCGNNNNNNNCGW 1 cut(s) 1564
PdmI GAANNNNTTC 2 cut(s) 441, 875
PfeI GAWTC 3 cut(s) 130, 454, 1113
PflMI CCANNNNNTGG 1 cut(s) 1241
PfoI TCCNGGA 1 cut(s) 1027
PkrI GCNGC 5 cut(s) 1024, 1308, 1342, 1426, 1555
PleI GAGTC 1 cut(s) 1033
PmaCI CACGTG 1 cut(s) 659
PmlI CACGTG 1 cut(s) 659
PpsI GAGTC 1 cut(s) 1033
Ppu21I YACGTR 1 cut(s) 659
PshBI ATTAAT 1 cut(s) 743
Psp124BI GAGCTC 2 cut(s) 858, 1332
Psp6I CCWGG 3 cut(s) 428, 1027, 1360
PspCI CACGTG 1 cut(s) 659
PspGI CCWGG 3 cut(s) 428, 1027, 1360
PspN4I GGNNCC 2 cut(s) 438, 846
PstI CTGCAG 1 cut(s) 193
PstNI CAGNNNCTG 1 cut(s) 1386
PsuI RGATCY 3 cut(s) 985, 1396, 1459
RsaI GTAC 4 cut(s) 361, 1080, 1183, 1384
RsaNI GTAC 4 cut(s) 360, 1079, 1182, 1383
SacI GAGCTC 2 cut(s) 858, 1332
SaqAI TTAA 6 cut(s) 483, 743, 779, 839, 1311, 1562
SatI GCNGC 5 cut(s) 1023, 1307, 1341, 1425, 1554
Sau3AI GATC 9 cut(s) 232, 322, 328, 385, 643, 763, 985, 1396, 1459
SchI GAGTC 1 cut(s) 1033
ScrFI CCNGG 4 cut(s) 430, 996, 1029, 1362
SduI GDGCHC 4 cut(s) 15, 664, 858, 1332
SfaNI GCATC 6 cut(s) 403, 724, 1061, 1219, 1327, 1450
SfcI CTRYAG 2 cut(s) 189, 1392
SmlI CTYRAG 2 cut(s) 778, 1310
SmoI CTYRAG 2 cut(s) 778, 1310
Sse9I AATT 7 cut(s) 77, 157, 576, 629, 735, 1289, 1315
SsiI CCGC 5 cut(s) 38, 367, 703, 848, 1128
SspMI CTAG 2 cut(s) 114, 768
SstI GAGCTC 2 cut(s) 858, 1332
StyD4I CCNGG 4 cut(s) 428, 994, 1027, 1360
StyI CCWWGG 1 cut(s) 113
TaaI ACNGT 4 cut(s) 405, 761, 791, 1382
TaiI ACGT 1 cut(s) 661
TasI AATT 7 cut(s) 77, 157, 576, 629, 735, 1289, 1315
TfiI GAWTC 3 cut(s) 130, 454, 1113
Tru1I TTAA 6 cut(s) 483, 743, 779, 839, 1311, 1562
Tru9I TTAA 6 cut(s) 483, 743, 779, 839, 1311, 1562
TscAI CASTG 5 cut(s) 198, 349, 408, 766, 796
TseFI GTSAC 2 cut(s) 340, 820
TseI GCWGC 5 cut(s) 1022, 1306, 1340, 1424, 1553
Tsp45I GTSAC 2 cut(s) 340, 820
TspDTI ATGAA 5 cut(s) 587, 902, 1113, 1220, 1425
TspGWI ACGGA 3 cut(s) 872, 1169, 1511
TspRI CASTG 5 cut(s) 198, 349, 408, 766, 796
Van91I CCANNNNNTGG 1 cut(s) 1241
Vha464I CTTAAG 2 cut(s) 778, 1310
VspI ATTAAT 1 cut(s) 743
XagI CCTNNNNNAGG 1 cut(s) 117
XapI RAATTY 2 cut(s) 157, 1315
XceI RCATGY 1 cut(s) 1085
XmaJI CCTAGG 1 cut(s) 113
XmiI GTMKAC 1 cut(s) 1377
XmnI GAANNNNTTC 2 cut(s) 441, 875
XspI CTAG 2 cut(s) 114, 768
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.