Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5C

Orthogroup ID

OG0010493

Physical Location & Seq

Genomic Coordinates Forward (+)

76689452 .. 76695133

Gene Structure 5682 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5CG550400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1407 bp

ATGTCACAGGTCCTGTCTTTCCATGTTCTTCTATCTGCAGAGACCCACAGGCCTTCTTCTTCTTCCTCCAAGTCACTCAAGTTGGAGCAGAGAACAAAGACATCCAGAAAAGGTAATTTCAATCCCTCACGCAAAACCCAGAAGCTGAATACCGAGGTTTCTACCTACAGAGGTGGTCAGTTCAATCCGGCACGCAAAACCCAGAAGCTGAATTTGGAGATTTCTCCTCACAGAGCTGTTTCTGCGGTGAGATTGATGAGAATAGAGATGGGAGGTGCTTTTGCTGATCTTCTCAATGAGAAAGGGAAGGGCTCTGGTGAAAATGAGATGGGATATGTTGAAAGAACTCTCGGGTTTCGCACACGGGATCTAGAGGATCGTGATCTTAGACTGGTCACTGAAATTGTTGGAGGCACCATACGTTGGAAGCGATATCTTGATCATTTGATCAGTTCGATATGTCGTGATGCAAACACATTTAGCAGGATGGAACCACTTCTTTTACAGATTCTCCGAATTGGTTTCTATGAGATTGTCAAGCTTAATATGCCACCGTATGCTGTTGTGGATGAGAATGTGAGGCTTGCGAAGATTGCCCTTAGACATGGTGCTGGCAACATGGTCAATGGGATTCTCCGGAAGCTTGTTCTACTTAAGGAAAGTAACTCTCTTCCTCTACCCAAAGTAGAGGGTGATGATCGCACACAAGCACGTGCTCTTGCCACTCTGTACTCTCATCCTGTATGGATGATAAGGCGATGGACAAAGCATCTGGGACAAGAAGAAGCAATTAGATTGATGGCATGGAATAATAGTGATCCTAGTTTCAGCTTAAGGGCAAACAGTGGGAAAGGTATTTCAAGAGCTGACCTTGTGACAAAGCTTAATTTATTGGAGGTCCCACATGAGCTCTCTTTGCATTTGAATGATTTTGTCCGTATGAAAAAAGGGTTGCAGACTGTAATTCAAGCTGGTTTGCTAAAAGAAGGTTTATGTTCTGTACAGGACGAGAGTGCAGGTCTGGTAGTTTCTGTTGTAGATCCGCAACAGGGTGAAAGCATTATTGATTGTTGTGCTGCTCCTGGAGGAAAGACTCTTTACATAGCGTCCCTTTTGAGTGGCCAAGGTATGGTATATGCAATTGACATAAATGAAGGGCGGTTGAGAATCCTCAAAGAAACGGCTAAGTTGCACCAAGTAGATAGTGTCGTCACCACTATCCATGCTGATATGCGTAGTTATGCTGACAATAATACTATGAAGTGTGATAAAGTTCTGTTGGATGCTCCATGTTCTGGACTGGGTGTTCTCTCCAAGAGGGCAGACTTGCGTTGGAACAGGAGATTAGAGGATATGGAGGAGCTTAAGAATTTGCAGGATGAGCTCCTTGATGCAGCTTCTCAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000154 GO:0001510 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006139 GO:0006364 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008168 GO:0008169 GO:0008173 GO:0008649 GO:0008757 GO:0009383 GO:0009451 GO:0009987 GO:0010467 GO:0016070 GO:0016072 GO:0016434 GO:0016740 GO:0016741 GO:0022613 GO:0031167 GO:0032259 GO:0034470 GO:0034641 GO:0034660 GO:0042254 GO:0043170 GO:0043412 GO:0043414 GO:0044085 GO:0044237 GO:0044238 GO:0044260 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0070475 GO:0071704 GO:0071840 GO:0090304 GO:0140098 GO:0140102 GO:1901360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Methyltr_RsmB-F NusB

Protein Analysis

468

Amino Acids

52.34

Weight (kDa)

9.34

Isoelectric Point (pI)

38.55

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
NusB	PF01029	107 - 215	3.3e-23	NusB family
RsmF-B_ferredox	PF22458	246 - 316	2.2e-08	Methyltr_RsmF/B-like, ferredoxin-like domain
Methyltr_RsmB-F	PF01189	345 - 466	1.1e-33	16S rRNA methyltransferase RsmB/F
TRM5-TYW2_MTfase	PF02475	349 - 432	5.4e-07	TRM5/TYW2 methyltransferase domain
FtsJ	PF01728	350 - 429	8e-06	FtsJ-like methyltransferase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010493)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G13180
fragaria_vesca	FvH4_3g42960 FvH4_3g42960 FvH4_3g42960 FvH4_3g42960 FvH4_3g42960 FvH4_3g43190
malus_domestica	MD03G1027000.v1.1
prunus_persica	Prupe.6G024300_v2.0.a1 Prupe.6G024300_v2.0.a1
rosa_chinensis	RchiOBHm_Chr5g0077011
rosa_multiflora	Rmu_sc0003323.1_g000006 Rmu_sc0038050.1_g000001
rosa_roxburghii	Rroxscaffold_1G00005130
rosa_rugosa	Rorug05G0450200 Rorug05G0450300.1
rosa_samantha	Rh5AG504900 Rh5BG526600 Rh5CG550400 Rh5DG538800
rosa_wichuraiana	Rw5G047150

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1007
AccB1I	GGYRCC	1 cut(s)	413
AccB7I	CCANNNNNTGG	3 cut(s)	423, 1129, 1295
AccIII	TCCGGA	1 cut(s)	636
AciI	CCGC	3 cut(s)	245, 1043, 1159
AclWI	GGATC	4 cut(s)	375, 384, 812, 1034
AcoI	YGGCCR	1 cut(s)	1120
AcsI	RAATTY	2 cut(s)	211, 1369
AcvI	CACGTG	1 cut(s)	713
AfaI	GTAC	2 cut(s)	731, 1002
AfiI	CCNNNNNNNGG	4 cut(s)	423, 1049, 1129, 1295
AflII	CTTAAG	3 cut(s)	653, 832, 1364
AgsI	TTSAA	6 cut(s)	121, 184, 341, 861, 925, 968
AjnI	CCWGG	1 cut(s)	1081
AjuI	GAANNNNNNNTTGG	2 cut(s)	197, 229
AloI	GAACNNNNNNTCC	2 cut(s)	1290, 1322
Alw21I	GWGCWC	3 cut(s)	718, 912, 1386
Alw26I	GTCTC	1 cut(s)	35
AlwI	GGATC	4 cut(s)	375, 384, 812, 1034
AlwNI	CAGNNNCTG	3 cut(s)	13, 145, 208
Ama87I	CYCGRG	1 cut(s)	350
Aor13HI	TCCGGA	1 cut(s)	636
AoxI	GGCC	2 cut(s)	50, 1120
ApeKI	GCWGC	2 cut(s)	1076, 1394
ApoI	RAATTY	2 cut(s)	211, 1369
Asp700I	GAANNNNTTC	1 cut(s)	495
AspS9I	GGNCC	2 cut(s)	10, 898
AsuHPI	GGTGA	5 cut(s)	259, 329, 704, 1064, 1204
AvaI	CYCGRG	1 cut(s)	350
AvaII	GGWCC	2 cut(s)	10, 898
BalI	TGGCCA	1 cut(s)	1122
BanI	GGYRCC	1 cut(s)	413
BanII	GRGCYC	3 cut(s)	314, 912, 1386
BbrPI	CACGTG	1 cut(s)	713
Bbv12I	GWGCWC	3 cut(s)	718, 912, 1386
BbvI	GCAGC	1 cut(s)	1063
BccI	CCATC	5 cut(s)	262, 322, 481, 753, 793
BceAI	ACGGC	1 cut(s)	1197
BciT130I	CCWGG	1 cut(s)	1083
BclI	TGATCA	2 cut(s)	439, 447
BcoDI	GTCTC	1 cut(s)	35
BfaI	CTAG	2 cut(s)	371, 822
BfmI	CTRYAG	2 cut(s)	36, 166
BfrI	CTTAAG	3 cut(s)	653, 832, 1364
BfuAI	ACCTGC	1 cut(s)	1007
BisI	GCNGC	2 cut(s)	1077, 1395
BlsI	GCNGC	2 cut(s)	1078, 1396
Bme1390I	CCNGG	1 cut(s)	1083
Bme18I	GGWCC	2 cut(s)	10, 898
BmeT110I	CYCGRG	1 cut(s)	350
BmgT120I	GGNCC	2 cut(s)	10, 898
BmiI	GGNNCC	3 cut(s)	415, 492, 900
BmrFI	CCNGG	1 cut(s)	1083
BmrI	ACTGGG	1 cut(s)	1310
BmsI	GCATC	4 cut(s)	457, 778, 1273, 1381
BmuI	ACTGGG	1 cut(s)	1310
BpmI	CTGGAG	1 cut(s)	1104
BpuEI	CTTGAG	1 cut(s)	62
BsaAI	YACGTR	1 cut(s)	713
BsaBI	GATNNNNATC	1 cut(s)	381
BsaI	GGTCTC	1 cut(s)	35
BsaJI	CCNNGG	2 cut(s)	153, 1123
BsaWI	WCCGGW	1 cut(s)	636
BsaXI	ACNNNNNCTCC	2 cut(s)	495, 525
Bsc4I	CCNNNNNNNGG	4 cut(s)	423, 1049, 1129, 1295
Bse1I	ACTGG	2 cut(s)	396, 1305
Bse8I	GATNNNNATC	1 cut(s)	381
BseAI	TCCGGA	1 cut(s)	636
BseBI	CCWGG	1 cut(s)	1083
BseDI	CCNNGG	2 cut(s)	153, 1123
BseGI	GGATG	7 cut(s)	101, 492, 574, 736, 753, 1288, 1384
BseJI	GATNNNNATC	1 cut(s)	381
BseLI	CCNNNNNNNGG	4 cut(s)	423, 1049, 1129, 1295
BseNI	ACTGG	2 cut(s)	396, 1305
BseRI	GAGGAG	2 cut(s)	216, 1373
BseXI	GCAGC	1 cut(s)	1063
BsgI	GTGCAG	1 cut(s)	1035
BshFI	GGCC	2 cut(s)	52, 1122
BshNI	GGYRCC	1 cut(s)	413
BsiHKAI	GWGCWC	3 cut(s)	718, 912, 1386
BsiHKCI	CYCGRG	1 cut(s)	350
BsiSI	CCGG	2 cut(s)	188, 637
BslFI	GGGAC	3 cut(s)	789, 884, 1093
BslI	CCNNNNNNNGG	4 cut(s)	423, 1049, 1129, 1295
BsmAI	GTCTC	1 cut(s)	35
BsmFI	GGGAC	3 cut(s)	789, 884, 1093
BsnI	GGCC	2 cut(s)	52, 1122
Bso31I	GGTCTC	1 cut(s)	35
BsoBI	CYCGRG	1 cut(s)	350
Bsp1286I	GDGCHC	4 cut(s)	314, 718, 912, 1386
Bsp13I	TCCGGA	1 cut(s)	636
Bsp1407I	TGTACA	1 cut(s)	1000
Bsp143I	GATC	9 cut(s)	286, 367, 376, 382, 439, 447, 697, 817, 1039
BspACI	CCGC	3 cut(s)	245, 1043, 1159
BspANI	GGCC	2 cut(s)	52, 1122
BspEI	TCCGGA	1 cut(s)	636
BspLI	GGNNCC	3 cut(s)	415, 492, 900
BspMAI	CTGCAG	1 cut(s)	40
BspMI	ACCTGC	1 cut(s)	1007
BspPI	GGATC	4 cut(s)	375, 384, 812, 1034
BspT107I	GGYRCC	1 cut(s)	413
BspTI	CTTAAG	3 cut(s)	653, 832, 1364
BspTNI	GGTCTC	1 cut(s)	35
BsrGI	TGTACA	1 cut(s)	1000
BsrI	ACTGG	2 cut(s)	396, 1305
BssECI	CCNNGG	2 cut(s)	153, 1123
BssMI	GATC	9 cut(s)	286, 367, 376, 382, 439, 447, 697, 817, 1039
BssT1I	CCWWGG	1 cut(s)	1123
Bst2UI	CCWGG	1 cut(s)	1083
Bst4CI	ACNGT	3 cut(s)	555, 845, 961
Bst6I	CTCTTC	1 cut(s)	675
BstAFI	CTTAAG	3 cut(s)	653, 832, 1364
BstAUI	TGTACA	1 cut(s)	1000
BstBAI	YACGTR	1 cut(s)	713
BstC8I	GCNNGC	3 cut(s)	193, 585, 613
BstDEI	CTNAG	4 cut(s)	386, 599, 1185, 1401
BstF5I	GGATG	7 cut(s)	101, 492, 574, 736, 753, 1288, 1384
BstKTI	GATC	9 cut(s)	289, 370, 379, 385, 442, 450, 700, 820, 1042
BstMAI	GTCTC	1 cut(s)	35
BstMBI	GATC	9 cut(s)	286, 367, 376, 382, 439, 447, 697, 817, 1039
BstMWI	GCNNNNNNNGC	5 cut(s)	242, 547, 593, 916, 1381
BstNI	CCWGG	1 cut(s)	1083
BstSCI	CCNGG	1 cut(s)	1081
BstSFI	CTRYAG	2 cut(s)	36, 166
BstV1I	GCAGC	1 cut(s)	1063
BstX2I	RGATCY	2 cut(s)	367, 1039
BstYI	RGATCY	2 cut(s)	367, 1039
BsuRI	GGCC	2 cut(s)	52, 1122
BtgZI	GCGATG	1 cut(s)	772
BtsCI	GGATG	7 cut(s)	101, 492, 574, 736, 753, 1288, 1384
BtsIMutI	CAGTG	2 cut(s)	396, 850
BveI	ACCTGC	1 cut(s)	1007
Cac8I	GCNNGC	3 cut(s)	193, 585, 613
CaiI	CAGNNNCTG	3 cut(s)	13, 145, 208
Cfr13I	GGNCC	2 cut(s)	10, 898
CseI	GACGC	1 cut(s)	1095
Csp6I	GTAC	2 cut(s)	730, 1001
CviAII	CATG	7 cut(s)	23, 605, 619, 804, 905, 1223, 1290
CviQI	GTAC	2 cut(s)	730, 1001
DdeI	CTNAG	4 cut(s)	386, 599, 1185, 1401
DpnI	GATC	9 cut(s)	288, 369, 378, 384, 441, 449, 699, 819, 1041
DpnII	GATC	9 cut(s)	286, 367, 376, 382, 439, 447, 697, 817, 1039
EaeI	YGGCCR	1 cut(s)	1120
Eam1104I	CTCTTC	1 cut(s)	675
EarI	CTCTTC	1 cut(s)	675
Ecl136II	GAGCTC	2 cut(s)	910, 1384
Eco130I	CCWWGG	1 cut(s)	1123
Eco147I	AGGCCT	1 cut(s)	52
Eco24I	GRGCYC	3 cut(s)	314, 912, 1386
Eco31I	GGTCTC	1 cut(s)	35
Eco32I	GATATC	1 cut(s)	434
Eco47I	GGWCC	2 cut(s)	10, 898
Eco53kI	GAGCTC	2 cut(s)	910, 1384
Eco72I	CACGTG	1 cut(s)	713
Eco88I	CYCGRG	1 cut(s)	350
EcoICRI	GAGCTC	2 cut(s)	910, 1384
EcoO109I	RGGNCCY	2 cut(s)	10, 898
EcoRII	CCWGG	1 cut(s)	1081
EcoRV	GATATC	1 cut(s)	434
EcoT14I	CCWWGG	1 cut(s)	1123
EcoT38I	GRGCYC	3 cut(s)	314, 912, 1386
ErhI	CCWWGG	1 cut(s)	1123
FaeI	CATG	7 cut(s)	26, 608, 622, 807, 908, 1226, 1293
FaqI	GGGAC	3 cut(s)	789, 884, 1093
FatI	CATG	7 cut(s)	22, 604, 618, 803, 904, 1222, 1289
FbaI	TGATCA	2 cut(s)	439, 447
Fnu4HI	GCNGC	2 cut(s)	1077, 1395
FokI	GGATG	7 cut(s)	88, 499, 581, 723, 760, 1295, 1391
FriOI	GRGCYC	3 cut(s)	314, 912, 1386
Fsp4HI	GCNGC	2 cut(s)	1077, 1395
FspBI	CTAG	2 cut(s)	371, 822
GluI	GCNGC	2 cut(s)	1077, 1395
GsuI	CTGGAG	1 cut(s)	1104
HaeIII	GGCC	2 cut(s)	52, 1122
HapII	CCGG	2 cut(s)	188, 637
HgaI	GACGC	1 cut(s)	1095
Hin1II	CATG	7 cut(s)	26, 608, 622, 807, 908, 1226, 1293
HindIII	AAGCTT	3 cut(s)	539, 641, 881
HinfI	GANTC	4 cut(s)	508, 631, 1093, 1167
HpaII	CCGG	2 cut(s)	188, 637
HphI	GGTGA	5 cut(s)	259, 329, 704, 1064, 1204
Hpy188I	TCNGA	1 cut(s)	515
Hpy188III	TCNNGA	8 cut(s)	105, 371, 380, 437, 464, 637, 861, 1296
HpyAV	CCTTC	4 cut(s)	63, 301, 980, 1148
HpyCH4III	ACNGT	3 cut(s)	555, 845, 961
HpyCH4IV	ACGT	2 cut(s)	421, 712
HpyCH4V	TGCA	9 cut(s)	38, 470, 919, 955, 1016, 1139, 1192, 1375, 1394
HpyF10VI	GCNNNNNNNGC	5 cut(s)	242, 547, 593, 916, 1381
HpyF3I	CTNAG	4 cut(s)	386, 599, 1185, 1401
HpySE526I	ACGT	2 cut(s)	421, 712
Hsp92II	CATG	7 cut(s)	26, 608, 622, 807, 908, 1226, 1293
Kpn2I	TCCGGA	1 cut(s)	636
Ksp22I	TGATCA	2 cut(s)	439, 447
Kzo9I	GATC	9 cut(s)	286, 367, 376, 382, 439, 447, 697, 817, 1039
LmnI	GCTCC	5 cut(s)	85, 1084, 1291, 1360, 1389
Lsp1109I	GCAGC	1 cut(s)	1063
LweI	GCATC	4 cut(s)	457, 778, 1273, 1381
MaeI	CTAG	2 cut(s)	371, 822
MaeII	ACGT	2 cut(s)	421, 712
MaeIII	GTNAC	6 cut(s)	3, 72, 394, 662, 874, 1210
MalI	GATC	9 cut(s)	288, 369, 378, 384, 441, 449, 699, 819, 1041
MboI	GATC	9 cut(s)	286, 367, 376, 382, 439, 447, 697, 817, 1039
MboII	GAAGA	8 cut(s)	20, 48, 51, 54, 281, 601, 662, 794
MfeI	CAATTG	1 cut(s)	1140
MflI	RGATCY	2 cut(s)	367, 1039
MhlI	GDGCHC	4 cut(s)	314, 718, 912, 1386
MlsI	TGGCCA	1 cut(s)	1122
MluCI	AATT	9 cut(s)	115, 211, 402, 516, 789, 886, 963, 1140, 1369
MluNI	TGGCCA	1 cut(s)	1122
MlyI	GAGTC	1 cut(s)	1087
MmeI	TCCRAC	5 cut(s)	63, 388, 404, 1260, 1313
Mox20I	TGGCCA	1 cut(s)	1122
MroI	TCCGGA	1 cut(s)	636
MroXI	GAANNNNTTC	1 cut(s)	495
MscI	TGGCCA	1 cut(s)	1122
MseI	TTAA	5 cut(s)	543, 654, 833, 885, 1365
MslI	CAYNNNNRTG	1 cut(s)	924
Msp20I	TGGCCA	1 cut(s)	1122
MspCI	CTTAAG	3 cut(s)	653, 832, 1364
MspI	CCGG	2 cut(s)	188, 637
MspR9I	CCNGG	1 cut(s)	1083
MunI	CAATTG	1 cut(s)	1140
MvaI	CCWGG	1 cut(s)	1083
MwoI	GCNNNNNNNGC	5 cut(s)	242, 547, 593, 916, 1381
NdeII	GATC	9 cut(s)	286, 367, 376, 382, 439, 447, 697, 817, 1039
NlaIII	CATG	7 cut(s)	26, 608, 622, 807, 908, 1226, 1293
NlaIV	GGNNCC	3 cut(s)	415, 492, 900
NmuCI	GTSAC	5 cut(s)	3, 72, 394, 874, 1210
PceI	AGGCCT	1 cut(s)	52
PcsI	WCGNNNNNNNCGW	1 cut(s)	427
PdmI	GAANNNNTTC	1 cut(s)	495
PfeI	GAWTC	3 cut(s)	508, 631, 1167
PflMI	CCANNNNNTGG	3 cut(s)	423, 1129, 1295
PfoI	TCCNGGA	1 cut(s)	1081
PkrI	GCNGC	2 cut(s)	1078, 1396
PleI	GAGTC	1 cut(s)	1087
PmaCI	CACGTG	1 cut(s)	713
PmlI	CACGTG	1 cut(s)	713
PpsI	GAGTC	1 cut(s)	1087
Ppu21I	YACGTR	1 cut(s)	713
PpuMI	RGGWCCY	2 cut(s)	10, 898
Psp124BI	GAGCTC	2 cut(s)	912, 1386
Psp5II	RGGWCCY	2 cut(s)	10, 898
Psp6I	CCWGG	1 cut(s)	1081
PspCI	CACGTG	1 cut(s)	713
PspGI	CCWGG	1 cut(s)	1081
PspN4I	GGNNCC	3 cut(s)	415, 492, 900
PspPI	GGNCC	2 cut(s)	10, 898
PspPPI	RGGWCCY	2 cut(s)	10, 898
PstI	CTGCAG	1 cut(s)	40
PstNI	CAGNNNCTG	3 cut(s)	13, 145, 208
PsuI	RGATCY	2 cut(s)	367, 1039
RsaI	GTAC	2 cut(s)	731, 1002
RsaNI	GTAC	2 cut(s)	730, 1001
RseI	CAYNNNNRTG	1 cut(s)	924
SacI	GAGCTC	2 cut(s)	912, 1386
SaqAI	TTAA	5 cut(s)	543, 654, 833, 885, 1365
SatI	GCNGC	2 cut(s)	1077, 1395
Sau3AI	GATC	9 cut(s)	286, 367, 376, 382, 439, 447, 697, 817, 1039
Sau96I	GGNCC	2 cut(s)	10, 898
SchI	GAGTC	1 cut(s)	1087
ScrFI	CCNGG	1 cut(s)	1083
SduI	GDGCHC	4 cut(s)	314, 718, 912, 1386
SfaNI	GCATC	4 cut(s)	457, 778, 1273, 1381
SfcI	CTRYAG	2 cut(s)	36, 166
SinI	GGWCC	2 cut(s)	10, 898
SmiMI	CAYNNNNRTG	1 cut(s)	924
SmlI	CTYRAG	4 cut(s)	77, 653, 832, 1364
SmoI	CTYRAG	4 cut(s)	77, 653, 832, 1364
Sse9I	AATT	9 cut(s)	115, 211, 402, 516, 789, 886, 963, 1140, 1369
SseBI	AGGCCT	1 cut(s)	52
SsiI	CCGC	3 cut(s)	245, 1043, 1159
SspMI	CTAG	2 cut(s)	371, 822
SstI	GAGCTC	2 cut(s)	912, 1386
StuI	AGGCCT	1 cut(s)	52
StyD4I	CCNGG	1 cut(s)	1081
StyI	CCWWGG	1 cut(s)	1123
TaaI	ACNGT	3 cut(s)	555, 845, 961
TaiI	ACGT	2 cut(s)	424, 715
TaqI	TCGA	1 cut(s)	455
TasI	AATT	9 cut(s)	115, 211, 402, 516, 789, 886, 963, 1140, 1369
TatI	WGTACW	2 cut(s)	729, 1000
TfiI	GAWTC	3 cut(s)	508, 631, 1167
Tru1I	TTAA	5 cut(s)	543, 654, 833, 885, 1365
Tru9I	TTAA	5 cut(s)	543, 654, 833, 885, 1365
TscAI	CASTG	2 cut(s)	403, 850
TseFI	GTSAC	5 cut(s)	3, 72, 394, 874, 1210
TseI	GCWGC	2 cut(s)	1076, 1394
Tsp45I	GTSAC	5 cut(s)	3, 72, 394, 874, 1210
TspDTI	ATGAA	3 cut(s)	956, 1167, 1274
TspGWI	ACGGA	1 cut(s)	926
TspRI	CASTG	2 cut(s)	403, 850
Van91I	CCANNNNNTGG	3 cut(s)	423, 1129, 1295
Vha464I	CTTAAG	3 cut(s)	653, 832, 1364
VpaK11BI	GGWCC	2 cut(s)	10, 898
XapI	RAATTY	2 cut(s)	211, 1369
XbaI	TCTAGA	1 cut(s)	370
XmnI	GAANNNNTTC	1 cut(s)	495
XspI	CTAG	2 cut(s)	371, 822

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.