FvH4_3g44690

Protein kinase domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
OG0011667
Physical Location & Seq
Reverse (-)
37224780 .. 37230511
5732 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g44690.t1

Sequence Viewer

Length: 2196 bp
ATGCCGGAGCTTCGAAAAGGTGTCCGCCGTGGTCGTGCTAGGGTAGAAGCTCACAAGCCTTCGGTCCCGCCTCCGCCGCCGCCGCCGCCGTCGAGGAGGACGCGTGCCGCCGTCGCGAGGGAGGCTGCTGTGGCTGTGGTGAGGCCGAGGACGAGGTCGGCCGTGAAGAAGCTGAAGGAGGAGGAAGACGTGCCGGAGCCGGTGAAGGAGGTTGAGAAGGAGAACGTGATTGTGATTTCGGAGAAGGAGGAGTCCGATTCAGAGGGCGAAAAGGAAGAAGAACAAGTCGAAGAAGAAGAGGAAGAAGAAGAAGAAGAAGAAGAGGAGGAAGAAGAAGAAGAGGAGGAGGAGGAAGAAGAAGAAGAGGAGGACGAAAAAGCTGAGATGGCTGACGATAGTGGTGGCCTGAGCGCTAATAAGGTTACCGGGGCAGAAGAAGAGGGCAGTACGGCGCCGTTTCCCGAAAAGGTTCAAGTAGGAGGATCGCCGCAATATAAGGTGGAAAGGAAGCTGGGCAAAGGTGGTTTTGGTCAGGTGTTTGTTGGTCGTCGCGTTACAGGTGGAGTTGATCGCACAAGTGGTCCTGGTGCTATCGAGGTAGCATTAAAATTCGAGCACAGAAACAGTAAAGGCTGCAGCTATGGTCCTCCGTATGAGTGGCAAGTTTACAACACTCTTGGTGGTAGTCATGGAGTTCCCAGAGTACATTATAAGGGAAAGCAAGGGGACTATTATGTTATGGTTATGGACATGCTAGGACCCAGCTTATGGGATGTATGGAATACTTCAGGGCAAGCGATGTCTGCAGAAATGGTAGCTTGTATAGCTGTTGAATCTTTATCAATTCTGGAGAAGATGCACTCTAGAGGGTATGTGCATGGAGATGTAAAGCCAGAGAACTTTTTGCTTGGTCAGCCAAATACCGCTCAAGAGAAGAAGTTATACCTTGTTGATCTTGGACTAGCAACAAAGTGGAAAGATAGCTCAAGTGGGCTTCATGTTGATTATGATCAACGTCCTGATATGTTTAGAGGAACCGTTCGATATGCTAGTGTTCATGCTCACCTGGGAAGAACCGCAAGTAGACGAGATGACCTCGAATCACTTGCTTATACACTTATCTTTCTCCATCGAGGAAGGTTGCCATGGCAGGGCTATCAGGGTGATAACAAATCTTTCCTAGTTTGTAAAAAGAAGATGGCAACATCACCTGAAATGCTGTGCTGTTTCTGCCCTGCAGCCCTAAGGCAATTTCTTGAGATTGTAGTGAACATGAAATTTGATGAAGAGCCTAACTATTCGAAATTGATATCACTGTTTGAGGGATTGATAGGAACAAATCCTGCTGTAAGGCCATTAAAAATTGATGGTGCTCAGAAGATTATTAGCCAGGTTGGTCAGAAACGGGGCAGATTGAATATTGAGGAAGATGATGATGGGCAGCCAAGGAAGAAAGTTCGGCTAGGAGTACCCGCTACGCAATGGATTTCAATTTACAATGCTCGGATGCCTATGAAACAAAGGTATCACTACAACGTCGCTGATGCAAGGTTGGCACAACATGTGGAGAGAGGGATTGCAGATGGTCTGCTTATAAGTTGCGTGTCTTCGTGCTCTAATCTGTGGGCACTTATTATGGATGCTGGAACTGGTTTTTCAAACCAAGTTTATGAGCTTTCTCCCTTTTTCTTGCACAAGGAATGGATCATGGAACAATGGGAGAAGAATTATTACATCAGTTCTATTGCTGGTGCTAACAATGGAAGTTCCCTTGTGGTGATGTCCAAAGGAACCCAGTATACTCAACAGTCCTACAAGGTGAGTGATTCTTTCCCGTTCAAGTGGATAAACAAAAAGTGGAGGGAAGGTTTTCATGTAACTTCAATGGCAACTGCTGGGAGCCGGTGGGGTGTTGTAATGTCTCGGAATGCTGGCTTCAGTGATCAGGTGGTGGAGCTGGATTTTCTTTATCCAAGTGAAGGCATCCACAGACGCTGGGACAATGGTTTCCGGATAACATCAACAGCTGCAACCTGGGACCAAGCGGCTCTTATCTTGAGTGTTCCCAAGCGCAAACCTGGTGACGAAACACAGGAGACCCTGCGTACATCACAATTTCCTAGCACACATGTCAAGGAAAAATGGGCAAAAAATCTGTATCTTGCATGTTTGTGCTATGGACGCACTGTATCTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04011 ko04392 map04011 map04392
Pfam Domains
Protein Families
Pkinase

Protein Analysis

732

Amino Acids

82.27

Weight (kDa)

5.67

Isoelectric Point (pI)

58.52

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 165 - 400 1.9e-17 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 166 - 437 5.2e-07 Protein tyrosine and serine/threonine kinase
Pkinase_fungal PF17667 271 - 375 2.7e-07 Fungal protein kinase
DUF7477 PF24289 464 - 731 1.9e-162 Domain of unknown function (DUF7477)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0011667)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G13670
fragaria_vesca FvH4_3g44690
malus_domestica MD03G1011500.v1.1 MD11G1014200.v1.1
prunus_persica Prupe.6G011900_v2.0.a1 Prupe.6G011900_v2.0.a1 Prupe.6G011900_v2.0.a1
pyrus_communis pycom03g01040 pycom11g00960
rosa_chinensis RchiOBHm_Chr5g0081361
rosa_laevigata RLG00000036927
rosa_multiflora Rmu_sc0007768.1_g000010 Rmu_sc0009187.1_g000017
rosa_roxburghii Rroxscaffold_1G00002180
rosa_rugosa Rorug05G0476000
rosa_samantha Rh5AG527400 Rh5BG551600 Rh5CG574400
rosa_wichuraiana Rw5G049050

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 711, 1595
AccB1I GGYRCC 1 cut(s) 451
AccB7I CCANNNNNTGG 1 cut(s) 768
AccBSI CCGCTC 1 cut(s) 926
AccI GTMKAC 2 cut(s) 1084, 1799
AccII CGCG 3 cut(s) 103, 116, 552
AccIII TCCGGA 1 cut(s) 2010
AclWI GGATC 2 cut(s) 490, 1712
AcoI YGGCCR 1 cut(s) 159
AcsI RAATTY 2 cut(s) 608, 1277
AcuI CTGAAG 3 cut(s) 194, 771, 1921
AcyI GRCGYC 1 cut(s) 452
AfaI GTAC 4 cut(s) 448, 705, 1470, 2107
AfeI AGCGCT 1 cut(s) 412
AfiI CCNNNNNNNGG 4 cut(s) 117, 768, 1151, 1979
AflIII ACRYGT 3 cut(s) 101, 1561, 2128
AgsI TTSAA 7 cut(s) 473, 833, 1417, 1491, 1659, 1840, 1884
AjiI CACGTC 1 cut(s) 190
AjnI CCWGG 5 cut(s) 583, 1065, 1389, 2033, 2077
Alw21I GWGCWC 3 cut(s) 618, 1375, 1616
Alw26I GTCTC 2 cut(s) 1926, 2090
AlwI GGATC 2 cut(s) 490, 1712
AlwNI CAGNNNCTG 1 cut(s) 1995
Aor13HI TCCGGA 1 cut(s) 2010
Aor51HI AGCGCT 1 cut(s) 412
AoxI GGCC 4 cut(s) 143, 159, 403, 1352
ApeKI GCWGC 6 cut(s) 125, 633, 636, 1238, 1441, 2027
ApoI RAATTY 2 cut(s) 608, 1277
Asp700I GAANNNNTTC 2 cut(s) 468, 1869
AspLEI GCGC 3 cut(s) 413, 454, 2073
AspS9I GGNCC 5 cut(s) 64, 581, 644, 758, 2038
AsuC2I CCSGG 1 cut(s) 427
AsuHPI GGTGA 8 cut(s) 151, 214, 1055, 1175, 1200, 1789, 1831, 2093
AsuII TTCGAA 2 cut(s) 13, 1301
AvaII GGWCC 5 cut(s) 64, 581, 644, 758, 2038
AxyI CCTNAGG 1 cut(s) 1244
BaeGI GKGCMC 1 cut(s) 1630
BaeI ACNNNNGTAYC 2 cut(s) 1508, 1541
BanI GGYRCC 1 cut(s) 451
BarI GAAGNNNNNNTAC 4 cut(s) 926, 958, 1715, 1747
BbsI GAAGAC 2 cut(s) 192, 1599
Bbv12I GWGCWC 3 cut(s) 618, 1375, 1616
BbvI GCAGC 6 cut(s) 112, 620, 648, 1250, 1453, 2014
BccI CCATC 6 cut(s) 379, 1137, 1192, 1361, 1430, 1577
BceAI ACGGC 6 cut(s) 12, 73, 95, 146, 439, 465
BcgI CGANNNNNNTGC 2 cut(s) 1088, 1122
BciT130I CCWGG 5 cut(s) 585, 1067, 1391, 2035, 2079
BclI TGATCA 2 cut(s) 1009, 1942
BcnI CCSGG 1 cut(s) 427
BcoDI GTCTC 2 cut(s) 1926, 2090
BfaI CTAG 8 cut(s) 39, 755, 864, 962, 1050, 1181, 1463, 2121
BfmI CTRYAG 3 cut(s) 634, 804, 1236
BfoI RGCGCY 2 cut(s) 414, 455
Bme1390I CCNGG 6 cut(s) 427, 585, 1067, 1391, 2035, 2079
Bme18I GGWCC 5 cut(s) 64, 581, 644, 758, 2038
BmgBI CACGTC 1 cut(s) 190
BmgT120I GGNCC 5 cut(s) 64, 581, 644, 758, 2038
BmiI GGNNCC 8 cut(s) 66, 198, 453, 760, 1036, 1792, 1901, 2039
BmrFI CCNGG 6 cut(s) 427, 585, 1067, 1391, 2035, 2079
BmrI ACTGGG 1 cut(s) 1789
BmsI GCATC 5 cut(s) 846, 1497, 1534, 1630, 1992
BmuI ACTGGG 1 cut(s) 1789
BpiI GAAGAC 2 cut(s) 192, 1599
BplI GAGNNNNNCTC 2 cut(s) 1080, 1112
BpmI CTGGAG 1 cut(s) 869
Bpu10I CCTNAGC 1 cut(s) 407
Bpu14I TTCGAA 2 cut(s) 13, 1301
BpuEI CTTGAG 4 cut(s) 912, 970, 1277, 2077
BpuMI CCSGG 1 cut(s) 427
BsaBI GATNNNNATC 1 cut(s) 1008
BsaHI GRCGYC 1 cut(s) 452
BsaI GGTCTC 1 cut(s) 2090
BsaJI CCNNGG 7 cut(s) 28, 146, 426, 1066, 1145, 1445, 2034
BsaWI WCCGGW 1 cut(s) 2010
BsaXI ACNNNNNCTCC 4 cut(s) 88, 118, 1852, 1882
Bsc4I CCNNNNNNNGG 4 cut(s) 117, 768, 1151, 1979
Bse118I RCCGGY 2 cut(s) 199, 1902
Bse1I ACTGG 2 cut(s) 1654, 1795
Bse21I CCTNAGG 1 cut(s) 1244
Bse3DI GCAATG 1 cut(s) 1487
Bse8I GATNNNNATC 1 cut(s) 1008
BseAI TCCGGA 1 cut(s) 2010
BseBI CCWGG 5 cut(s) 585, 1067, 1391, 2035, 2079
BseDI CCNNGG 7 cut(s) 28, 146, 426, 1066, 1145, 1445, 2034
BseGI GGATG 4 cut(s) 778, 1512, 1645, 1983
BseJI GATNNNNATC 1 cut(s) 1008
BseLI CCNNNNNNNGG 4 cut(s) 117, 768, 1151, 1979
BseMI GCAATG 1 cut(s) 1487
BseMII CTCAG 3 cut(s) 372, 398, 1388
BseNI ACTGG 2 cut(s) 1654, 1795
BseRI GAGGAG 8 cut(s) 109, 194, 263, 338, 356, 359, 362, 380
BseSI GKGCMC 1 cut(s) 1630
BseX3I CGGCCG 1 cut(s) 159
BseXI GCAGC 6 cut(s) 112, 620, 648, 1250, 1453, 2014
BseYI CCCAGC 4 cut(s) 511, 761, 1895, 1995
Bsh1236I CGCG 3 cut(s) 103, 116, 552
Bsh1285I CGRYCG 1 cut(s) 162
BshFI GGCC 4 cut(s) 145, 161, 405, 1354
BshNI GGYRCC 1 cut(s) 451
BsiEI CGRYCG 1 cut(s) 162
BsiHKAI GWGCWC 3 cut(s) 618, 1375, 1616
BsiSI CCGG 6 cut(s) 5, 194, 200, 426, 1903, 2011
BslFI GGGAC 4 cut(s) 50, 740, 2012, 2051
BslI CCNNNNNNNGG 4 cut(s) 117, 768, 1151, 1979
BsmAI GTCTC 2 cut(s) 1926, 2090
BsmFI GGGAC 4 cut(s) 50, 740, 2012, 2051
BsmI GAATGC 1 cut(s) 1933
BsnI GGCC 4 cut(s) 145, 161, 405, 1354
Bso31I GGTCTC 1 cut(s) 2090
Bsp119I TTCGAA 2 cut(s) 13, 1301
Bsp1286I GDGCHC 4 cut(s) 618, 1375, 1616, 1630
Bsp13I TCCGGA 1 cut(s) 2010
Bsp143I GATC 6 cut(s) 482, 568, 952, 1009, 1704, 1942
Bsp19I CCATGG 1 cut(s) 1145
Bsp68I TCGCGA 1 cut(s) 116
BspANI GGCC 4 cut(s) 145, 161, 405, 1354
BspCNI CTCAG 3 cut(s) 373, 399, 1387
BspEI TCCGGA 1 cut(s) 2010
BspFNI CGCG 3 cut(s) 103, 116, 552
BspLI GGNNCC 8 cut(s) 66, 198, 453, 760, 1036, 1792, 1901, 2039
BspMAI CTGCAG 3 cut(s) 638, 808, 1240
BspPI GGATC 2 cut(s) 490, 1712
BspQI GCTCTTC 1 cut(s) 1281
BspT104I TTCGAA 2 cut(s) 13, 1301
BspT107I GGYRCC 1 cut(s) 451
BspTNI GGTCTC 1 cut(s) 2090
BsrBI CCGCTC 1 cut(s) 926
BsrDI GCAATG 1 cut(s) 1487
BsrFI RCCGGY 2 cut(s) 199, 1902
BsrI ACTGG 2 cut(s) 1654, 1795
BssAI RCCGGY 2 cut(s) 199, 1902
BssECI CCNNGG 7 cut(s) 28, 146, 426, 1066, 1145, 1445, 2034
BssMI GATC 6 cut(s) 482, 568, 952, 1009, 1704, 1942
BssNAI GTATAC 1 cut(s) 1800
BssNI GRCGYC 1 cut(s) 452
BssT1I CCWWGG 2 cut(s) 1145, 1445
Bst1107I GTATAC 1 cut(s) 1800
Bst2UI CCWGG 5 cut(s) 585, 1067, 1391, 2035, 2079
Bst4CI ACNGT 5 cut(s) 626, 1039, 1317, 1809, 2188
Bst6I CTCTTC 6 cut(s) 291, 315, 333, 357, 432, 1281
BstACI GRCGYC 1 cut(s) 452
BstBI TTCGAA 2 cut(s) 13, 1301
BstC8I GCNNGC 3 cut(s) 105, 795, 1933
BstDEI CTNAG 5 cut(s) 381, 407, 1244, 1374, 2193
BstDSI CCRYGG 2 cut(s) 28, 1145
BstEII GGTNACC 1 cut(s) 421
BstF5I GGATG 4 cut(s) 778, 1512, 1645, 1983
BstFNI CGCG 3 cut(s) 103, 116, 552
BstH2I RGCGCY 2 cut(s) 414, 455
BstHHI GCGC 3 cut(s) 413, 454, 2073
BstKTI GATC 6 cut(s) 485, 571, 955, 1012, 1707, 1945
BstMAI GTCTC 2 cut(s) 1926, 2090
BstMBI GATC 6 cut(s) 482, 568, 952, 1009, 1704, 1942
BstMCI CGRYCG 1 cut(s) 162
BstNI CCWGG 5 cut(s) 585, 1067, 1391, 2035, 2079
BstNSI RCATGY 4 cut(s) 754, 1565, 2132, 2169
BstPI GGTNACC 1 cut(s) 421
BstSCI CCNGG 6 cut(s) 425, 583, 1065, 1389, 2033, 2077
BstSFI CTRYAG 3 cut(s) 634, 804, 1236
BstSLI GKGCMC 1 cut(s) 1630
BstUI CGCG 3 cut(s) 103, 116, 552
BstV1I GCAGC 6 cut(s) 112, 620, 648, 1250, 1453, 2014
BstV2I GAAGAC 2 cut(s) 192, 1599
BstZ17I GTATAC 1 cut(s) 1800
BstZI CGGCCG 1 cut(s) 159
Bsu36I CCTNAGG 1 cut(s) 1244
BsuRI GGCC 4 cut(s) 145, 161, 405, 1354
BtgI CCRYGG 2 cut(s) 28, 1145
BtgZI GCGATG 1 cut(s) 812
BtrI CACGTC 1 cut(s) 190
BtsCI GGATG 4 cut(s) 778, 1512, 1645, 1983
BtsIMutI CAGTG 3 cut(s) 1313, 1945, 2184
BtuMI TCGCGA 1 cut(s) 116
Cac8I GCNNGC 3 cut(s) 105, 795, 1933
CaiI CAGNNNCTG 1 cut(s) 1995
CfoI GCGC 3 cut(s) 413, 454, 2073
Cfr10I RCCGGY 2 cut(s) 199, 1902
Cfr13I GGNCC 5 cut(s) 64, 581, 644, 758, 2038
CseI GACGC 3 cut(s) 109, 2001, 2190
CsiI ACCWGGT 1 cut(s) 2077
Csp6I GTAC 4 cut(s) 447, 704, 1469, 2106
CviQI GTAC 4 cut(s) 447, 704, 1469, 2106
DdeI CTNAG 5 cut(s) 381, 407, 1244, 1374, 2193
DinI GGCGCC 1 cut(s) 453
DpnI GATC 6 cut(s) 484, 570, 954, 1011, 1706, 1944
DpnII GATC 6 cut(s) 482, 568, 952, 1009, 1704, 1942
EaeI YGGCCR 1 cut(s) 159
EagI CGGCCG 1 cut(s) 159
Eam1104I CTCTTC 6 cut(s) 291, 315, 333, 357, 432, 1281
EarI CTCTTC 6 cut(s) 291, 315, 333, 357, 432, 1281
EciI GGCGGA 2 cut(s) 14, 63
EclXI CGGCCG 1 cut(s) 159
Eco130I CCWWGG 2 cut(s) 1145, 1445
Eco31I GGTCTC 1 cut(s) 2090
Eco32I GATATC 1 cut(s) 1311
Eco47I GGWCC 5 cut(s) 64, 581, 644, 758, 2038
Eco47III AGCGCT 1 cut(s) 412
Eco52I CGGCCG 1 cut(s) 159
Eco57I CTGAAG 3 cut(s) 194, 771, 1921
Eco81I CCTNAGG 1 cut(s) 1244
Eco91I GGTNACC 1 cut(s) 421
EcoO109I RGGNCCY 1 cut(s) 758
EcoO65I GGTNACC 1 cut(s) 421
EcoRII CCWGG 5 cut(s) 583, 1065, 1389, 2033, 2077
EcoRV GATATC 1 cut(s) 1311
EcoT14I CCWWGG 2 cut(s) 1145, 1445
EgeI GGCGCC 1 cut(s) 453
EheI GGCGCC 1 cut(s) 453
ErhI CCWWGG 2 cut(s) 1145, 1445
FalI AAGNNNNNCTT 2 cut(s) 2034, 2066
FaqI GGGAC 4 cut(s) 50, 740, 2012, 2051
FauI CCCGC 2 cut(s) 75, 1480
FbaI TGATCA 2 cut(s) 1009, 1942
FblI GTMKAC 2 cut(s) 1084, 1799
FokI GGATG 4 cut(s) 785, 1519, 1652, 1970
FspBI CTAG 8 cut(s) 39, 755, 864, 962, 1050, 1181, 1463, 2121
GlaI GCGC 3 cut(s) 412, 453, 2072
GsaI CCCAGC 4 cut(s) 515, 765, 1899, 1999
GsuI CTGGAG 1 cut(s) 869
HaeII RGCGCY 2 cut(s) 414, 455
HaeIII GGCC 4 cut(s) 145, 161, 405, 1354
HapII CCGG 6 cut(s) 5, 194, 200, 426, 1903, 2011
HgaI GACGC 3 cut(s) 109, 2001, 2190
HhaI GCGC 3 cut(s) 413, 454, 2073
Hin1I GRCGYC 1 cut(s) 452
Hin6I GCGC 3 cut(s) 411, 452, 2071
HinP1I GCGC 3 cut(s) 411, 452, 2071
HinfI GANTC 5 cut(s) 251, 257, 833, 1100, 1826
HpaII CCGG 6 cut(s) 5, 194, 200, 426, 1903, 2011
HphI GGTGA 8 cut(s) 151, 214, 1055, 1175, 1200, 1789, 1831, 2093
Hpy166II GTNNAC 4 cut(s) 667, 1085, 1270, 1800
Hpy188I TCNGA 7 cut(s) 241, 256, 262, 1377, 1401, 1506, 1926
Hpy188III TCNNGA 9 cut(s) 115, 461, 848, 864, 929, 1019, 1256, 2011, 2056
Hpy8I GTNNAC 4 cut(s) 667, 1085, 1270, 1800
Hpy99I CGWCG 4 cut(s) 94, 116, 552, 1541
HpyAV CCTTC 8 cut(s) 69, 169, 199, 211, 238, 1131, 1859, 1973
HpyCH4III ACNGT 5 cut(s) 626, 1039, 1317, 1809, 2188
HpyCH4IV ACGT 4 cut(s) 189, 225, 1015, 1536
HpyF3I CTNAG 5 cut(s) 381, 407, 1244, 1374, 2193
HpySE526I ACGT 4 cut(s) 189, 225, 1015, 1536
Hsp92I GRCGYC 1 cut(s) 452
HspAI GCGC 3 cut(s) 411, 452, 2071
KasI GGCGCC 1 cut(s) 451
Kpn2I TCCGGA 1 cut(s) 2010
Ksp22I TGATCA 2 cut(s) 1009, 1942
Kzo9I GATC 6 cut(s) 482, 568, 952, 1009, 1704, 1942
LguI GCTCTTC 1 cut(s) 1281
LmnI GCTCC 4 cut(s) 7, 196, 1899, 1954
Lsp1109I GCAGC 6 cut(s) 112, 620, 648, 1250, 1453, 2014
LweI GCATC 5 cut(s) 846, 1497, 1534, 1630, 1992
MabI ACCWGGT 1 cut(s) 2077
MaeI CTAG 8 cut(s) 39, 755, 864, 962, 1050, 1181, 1463, 2121
MaeII ACGT 4 cut(s) 189, 225, 1015, 1536
MaeIII GTNAC 4 cut(s) 421, 553, 1876, 2081
MalI GATC 6 cut(s) 484, 570, 954, 1011, 1706, 1944
MbiI CCGCTC 1 cut(s) 926
MboI GATC 6 cut(s) 482, 568, 952, 1009, 1704, 1942
MhlI GDGCHC 4 cut(s) 618, 1375, 1616, 1630
MluCI AATT 9 cut(s) 608, 843, 1250, 1277, 1304, 1362, 1491, 1726, 2114
MluI ACGCGT 1 cut(s) 101
Mly113I GGCGCC 1 cut(s) 452
MlyI GAGTC 1 cut(s) 260
MroI TCCGGA 1 cut(s) 2010
MroXI GAANNNNTTC 2 cut(s) 468, 1869
MseI TTAA 2 cut(s) 605, 1358
MslI CAYNNNNRTG 2 cut(s) 882, 2170
MspA1I CMGCKG 1 cut(s) 2027
MspI CCGG 6 cut(s) 5, 194, 200, 426, 1903, 2011
MspR9I CCNGG 6 cut(s) 427, 585, 1067, 1391, 2035, 2079
Mva1269I GAATGC 1 cut(s) 1933
MvaI CCWGG 5 cut(s) 585, 1067, 1391, 2035, 2079
MvnI CGCG 3 cut(s) 103, 116, 552
NarI GGCGCC 1 cut(s) 452
NciI CCSGG 1 cut(s) 427
NcoI CCATGG 1 cut(s) 1145
NdeII GATC 6 cut(s) 482, 568, 952, 1009, 1704, 1942
NlaIV GGNNCC 8 cut(s) 66, 198, 453, 760, 1036, 1792, 1901, 2039
NmeAIII GCCGAG 1 cut(s) 171
NmuCI GTSAC 1 cut(s) 2081
NruI TCGCGA 1 cut(s) 116
NspI RCATGY 4 cut(s) 754, 1565, 2132, 2169
NspV TTCGAA 2 cut(s) 13, 1301
PciI ACATGT 2 cut(s) 1561, 2128
PciSI GCTCTTC 1 cut(s) 1281
PctI GAATGC 1 cut(s) 1933
PdmI GAANNNNTTC 2 cut(s) 468, 1869
PfeI GAWTC 4 cut(s) 257, 833, 1100, 1826
PflFI GACNNNGTC 1 cut(s) 154
PflMI CCANNNNNTGG 1 cut(s) 768
PleI GAGTC 1 cut(s) 259
PluTI GGCGCC 1 cut(s) 455
PpsI GAGTC 1 cut(s) 259
PpuMI RGGWCCY 1 cut(s) 758
PscI ACATGT 2 cut(s) 1561, 2128
PsiI TTATAA 2 cut(s) 711, 1595
Psp5II RGGWCCY 1 cut(s) 758
Psp6I CCWGG 5 cut(s) 583, 1065, 1389, 2033, 2077
PspEI GGTNACC 1 cut(s) 421
PspFI CCCAGC 4 cut(s) 511, 761, 1895, 1995
PspGI CCWGG 5 cut(s) 583, 1065, 1389, 2033, 2077
PspN4I GGNNCC 8 cut(s) 66, 198, 453, 760, 1036, 1792, 1901, 2039
PspPI GGNCC 5 cut(s) 64, 581, 644, 758, 2038
PspPPI RGGWCCY 1 cut(s) 758
PsrI GAACNNNNNNTAC 2 cut(s) 1783, 1815
PstI CTGCAG 3 cut(s) 638, 808, 1240
PstNI CAGNNNCTG 1 cut(s) 1995
PsyI GACNNNGTC 1 cut(s) 154
PvuII CAGCTG 1 cut(s) 2027
RruI TCGCGA 1 cut(s) 116
RsaI GTAC 4 cut(s) 448, 705, 1470, 2107
RsaNI GTAC 4 cut(s) 447, 704, 1469, 2106
RseI CAYNNNNRTG 2 cut(s) 882, 2170
SapI GCTCTTC 1 cut(s) 1281
SaqAI TTAA 2 cut(s) 605, 1358
Sau3AI GATC 6 cut(s) 482, 568, 952, 1009, 1704, 1942
Sau96I GGNCC 5 cut(s) 64, 581, 644, 758, 2038
SchI GAGTC 1 cut(s) 260
ScrFI CCNGG 6 cut(s) 427, 585, 1067, 1391, 2035, 2079
SduI GDGCHC 4 cut(s) 618, 1375, 1616, 1630
SexAI ACCWGGT 1 cut(s) 2077
SfaNI GCATC 5 cut(s) 846, 1497, 1534, 1630, 1992
SfcI CTRYAG 3 cut(s) 634, 804, 1236
SfoI GGCGCC 1 cut(s) 453
SfuI TTCGAA 2 cut(s) 13, 1301
SinI GGWCC 5 cut(s) 64, 581, 644, 758, 2038
SmiMI CAYNNNNRTG 2 cut(s) 882, 2170
SmlI CTYRAG 4 cut(s) 927, 985, 1256, 2056
SmoI CTYRAG 4 cut(s) 927, 985, 1256, 2056
Sse9I AATT 9 cut(s) 608, 843, 1250, 1277, 1304, 1362, 1491, 1726, 2114
SspDI GGCGCC 1 cut(s) 451
SspI AATATT 1 cut(s) 1420
SspMI CTAG 8 cut(s) 39, 755, 864, 962, 1050, 1181, 1463, 2121
StyD4I CCNGG 6 cut(s) 425, 583, 1065, 1389, 2033, 2077
StyI CCWWGG 2 cut(s) 1145, 1445
TaaI ACNGT 5 cut(s) 626, 1039, 1317, 1809, 2188
TaiI ACGT 4 cut(s) 192, 228, 1018, 1539
TaqI TCGA 9 cut(s) 13, 92, 288, 594, 612, 1042, 1098, 1132, 1301
TaqII GACCGA 1 cut(s) 52
TasI AATT 9 cut(s) 608, 843, 1250, 1277, 1304, 1362, 1491, 1726, 2114
TatI WGTACW 1 cut(s) 703
TauI GCSGC 7 cut(s) 79, 82, 85, 88, 110, 490, 2048
TfiI GAWTC 4 cut(s) 257, 833, 1100, 1826
Tru1I TTAA 2 cut(s) 605, 1358
Tru9I TTAA 2 cut(s) 605, 1358
TscAI CASTG 3 cut(s) 1320, 1945, 2191
TseFI GTSAC 1 cut(s) 2081
TseI GCWGC 6 cut(s) 125, 633, 636, 1238, 1441, 2027
Tsp45I GTSAC 1 cut(s) 2081
TspDTI ATGAA 6 cut(s) 986, 1046, 1289, 1299, 1529, 1862
TspGWI ACGGA 1 cut(s) 639
TspRI CASTG 3 cut(s) 1320, 1945, 2191
Tth111I GACNNNGTC 1 cut(s) 154
Van91I CCANNNNNTGG 1 cut(s) 768
VpaK11BI GGWCC 5 cut(s) 64, 581, 644, 758, 2038
XapI RAATTY 2 cut(s) 608, 1277
XbaI TCTAGA 1 cut(s) 863
XceI RCATGY 4 cut(s) 754, 1565, 2132, 2169
XmiI GTMKAC 2 cut(s) 1084, 1799
XmnI GAANNNNTTC 2 cut(s) 468, 1869
XspI CTAG 8 cut(s) 39, 755, 864, 962, 1050, 1181, 1463, 2121
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.