pycom03g01040

Protein kinase domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr3
OG0011667
Physical Location & Seq
Forward (+)
837731 .. 842589
4859 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom03g01040.15

Sequence Viewer

Length: 2097 bp
ATGCCGGAGCTTCGCAGAGGAGTACGCCGAGGCCGCGCTAGGGTAGCAAGCAAGCCCTCCGACCTACCGCCGCGGTCGCGGAGGACCCGTGCCACCGTTGCCCGAGAAGCCGCCGCCGAGGCCGTGGTGAGGCCCAGGACGAGGTTGGCCGTGAGGAAATTGAAAGAAGAGGAGAAGCAGGAGCCGGATCCGGAGGAAGACCCTGTGATTGTGATATCGGTGAAAGACTCCGATTCGGAGGGCAGTAAGGAAGAAGAAAAAGTCGAGGAAGATAAGAAAGCTGTGATGGCTGACGATAGTGGTGGCCTGAGTGCTAATAAGGCTGCTGGGCAAGAAGAAGAGGGCAGTACTGCCCCTTTCCCCGAAAAGGTTCAAGTAGGAGGGTCACCACTCTATAAGGTAGAGAGGAAGCTGGGGAAAGGTGGCTTTGGTCAAGTGTTTGTTGGCCGTCGTGTTACAGGTGGAGTTGATCGTCTAAGTGGTGCTGGTGCCATTGAGGTAGCACTTAAATTCGAGCACAGAAATAGCAAAGGATGTACTTATGGTCCTCCATATGAGTGGCAAGTTTACAATACCCTTGGTGGTAGTCATGGAGTGCCAAAAGTACATTATAAAGGAAAGCAAGGAGACTATTATGTTATGGTTATGGACATGCTAGGGCCTAGTTTATGGGATGTATGGAATTCTTCAGGGCAAGCGATGTCTGCAGAAATGGTAGCTTGTATAGCTGTCGAGTCTTTATCAATTCTAGAGAAGATGCACTCAAGAGGCTATGTGCATGGAGATGTAAAGCCCGAAAATTTTTTACTTGGTCAGCCATCTACAGCTCAAGAGAAGAAGTTGTTTCTTGTTGACCTTGGACTAGGTCGACAAAGTGGAAAGACACTAGTGGGGGGCATGTTGATTATGATCAACGACCTGATATGTTTAGAGGAACTGTGCGATATGCTAGTGTTCATGCTCATCTGGGAAGAACTGCTAGCAGAAGAGATCGATCTTGAATCTCTTGCTTACACACTTATATTTCTCCACCGAGGCAGGTTACCATGGCAAGGCTATCAGGGTGATAACAAATCTTTCCTAGTTTGCAAAAAAAAGATGGCAACATCTCCTGAAATGCTGTGTTGCTTCTGCCCTCCACCTCTAAGACAATTTCTTGAGGTCGTGGTGAACATGAAATTTGATGAAGAGCCTAACTATTCGAAGTTAATCTCGTTGTTTGAGGGTTTGATAGGATCAAATCCTGCTGTAAGGCCAATCAAAACTGATGGGGCTCAAAAGATTATTAGTCAAGTTGGCCAGAAACGGGGTAGATTGAATATCGAGGAAGATGATGATGGGCAGCCAAGGAAGAAGGTTAGGCTAGGAGTACCTGCCACCCAATGGATTTCAATTTACAATGCTAGGATGCCGATGAAACAGAGGTATCATTACAATGTCGCTGATGCAAGGTTGGCACAACATGTGGAGAGAGGGATTGCAGATGGTCTGCTTATAAGTTGTGTGTCATCTTGTTCTAATCTCTGGGCACTTATTATGGACGCTGGAACCGGTTTTACAAACCAAGTTTATGAGCTCTCCCCCTTCTTCTTGCACAAGGAATGGATCATGGAACAATGGGAGAAGAACTATTACATTAGTTCTATTGCCGGTGCTACCAATGGAAGTTCCCTTGTAGTGATGTCCAAAGGAACCCAGTATACGCAACAGTCTTACAAAGTCAGTGATTCTTTCCCCTTCAAGTGGATAAATAAGAAGTGGAGAGAAGGATTTCATGTGACCTCAATGGCAACTGCTGGGAGCAGGTGGGGTGTTGTTATGTCTCGCAATGCGGGCTTCAGTGATCAGGTTGTGGAACTTGATTTTCTCTATCCAAGTGAAGGCATCCACAGACGTTGGGATAATGGTTTCCGCATAACATCGACAGCTGCAACTTGGGATCGAACAGATCTTATCTTGAGTGTTCCGAAGCGCAAACCTGGTGACGAAACTCAGGAGACGCTGCGCACATCTCAATTTCCAAGCACACATGTGAAGGAAAAATGGGCGAAGAATCTGTATCTCGCTTGTTTGTGTTACGGGCGCACTGTATCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04011 ko04392 map04011 map04392
Pfam Domains
Protein Families
Pkinase

Protein Analysis

699

Amino Acids

78.17

Weight (kDa)

8.5

Isoelectric Point (pI)

50.14

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0011667)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G13670
fragaria_vesca FvH4_3g44690
malus_domestica MD03G1011500.v1.1 MD11G1014200.v1.1
prunus_persica Prupe.6G011900_v2.0.a1 Prupe.6G011900_v2.0.a1 Prupe.6G011900_v2.0.a1
pyrus_communis pycom03g01040 pycom11g00960
rosa_chinensis RchiOBHm_Chr5g0081361
rosa_laevigata RLG00000036927
rosa_multiflora Rmu_sc0007768.1_g000010 Rmu_sc0009187.1_g000017
rosa_roxburghii Rroxscaffold_1G00002180
rosa_rugosa Rorug05G0476000
rosa_samantha Rh5AG527400 Rh5BG551600 Rh5CG574400
rosa_wichuraiana Rw5G049050

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 612, 1496
AarI CACCTGC 1 cut(s) 1794
Acc16I TGCGCA 1 cut(s) 2006
Acc36I ACCTGC 3 cut(s) 1029, 1381, 1794
AccB1I GGYRCC 1 cut(s) 488
AccB7I CCANNNNNTGG 1 cut(s) 1383
AccI GTMKAC 2 cut(s) 868, 1700
AccII CGCG 3 cut(s) 36, 73, 79
AccIII TCCGGA 1 cut(s) 190
AciI CCGC 9 cut(s) 34, 68, 71, 73, 79, 111, 114, 1832, 1912
AclWI GGATC 5 cut(s) 182, 195, 1243, 1613, 1947
AcoI YGGCCR 3 cut(s) 147, 445, 1297
AcsI RAATTY 4 cut(s) 509, 682, 799, 1178
AcuI CTGAAG 2 cut(s) 672, 1822
AfaI GTAC 5 cut(s) 24, 349, 538, 606, 1371
AfiI CCNNNNNNNGG 9 cut(s) 40, 129, 141, 367, 1052, 1306, 1383, 1743, 1880
AflIII ACRYGT 2 cut(s) 1462, 2029
AgeI ACCGGT 1 cut(s) 1550
AgsI TTSAA 6 cut(s) 163, 374, 1001, 1318, 1392, 1741
AhlI ACTAGT 1 cut(s) 886
AjnI CCWGG 2 cut(s) 134, 1978
AleI CACNNNNGTG 1 cut(s) 2030
AluBI AGCT 8 cut(s) 10, 281, 412, 719, 728, 827, 1576, 1928
AluI AGCT 8 cut(s) 10, 281, 412, 719, 728, 827, 1576, 1928
Alw21I GWGCWC 2 cut(s) 519, 1578
Alw26I GTCTC 3 cut(s) 621, 1827, 1991
AlwI GGATC 5 cut(s) 182, 195, 1243, 1613, 1947
Ama87I CYCGRG 1 cut(s) 102
Aor13HI TCCGGA 1 cut(s) 190
AoxI GGCC 9 cut(s) 31, 120, 131, 147, 304, 445, 659, 1253, 1297
ApeKI GCWGC 4 cut(s) 323, 1342, 1928, 2002
ApoI RAATTY 4 cut(s) 509, 682, 799, 1178
AsiGI ACCGGT 1 cut(s) 1550
Asp700I GAANNNNTTC 2 cut(s) 369, 1770
AspLEI GCGC 4 cut(s) 38, 1974, 2007, 2085
AspS9I GGNCC 4 cut(s) 84, 132, 545, 659
AsuHPI GGTGA 6 cut(s) 139, 232, 378, 1076, 1180, 1994
AsuII TTCGAA 1 cut(s) 1202
AsuNHI GCTAGC 1 cut(s) 979
AvaI CYCGRG 1 cut(s) 102
AvaII GGWCC 2 cut(s) 84, 545
BaeGI GKGCMC 1 cut(s) 1531
BaeI ACNNNNGTAYC 2 cut(s) 1409, 1442
BalI TGGCCA 1 cut(s) 1299
BamHI GGATCC 1 cut(s) 187
BanI GGYRCC 1 cut(s) 488
BanII GRGCYC 2 cut(s) 1276, 1578
BarI GAAGNNNNNNTAC 2 cut(s) 1616, 1648
BbsI GAAGAC 1 cut(s) 204
Bbv12I GWGCWC 2 cut(s) 519, 1578
BbvI GCAGC 4 cut(s) 310, 1354, 1915, 1989
BccI CCATC 6 cut(s) 280, 826, 1093, 1262, 1331, 1478
BceAI ACGGC 3 cut(s) 107, 134, 432
BciT130I CCWGG 2 cut(s) 136, 1980
BclI TGATCA 2 cut(s) 909, 1843
BcoDI GTCTC 3 cut(s) 621, 1827, 1991
BcuI ACTAGT 1 cut(s) 886
BfmI CTRYAG 2 cut(s) 705, 822
BfuAI ACCTGC 3 cut(s) 1029, 1381, 1794
BglI GCCNNNNNGGC 1 cut(s) 119
BglII AGATCT 1 cut(s) 1948
BisI GCNGC 8 cut(s) 34, 71, 111, 114, 324, 1343, 1929, 2003
BlsI GCNGC 8 cut(s) 35, 72, 112, 115, 325, 1344, 1930, 2004
BmcAI AGTACT 1 cut(s) 349
Bme1390I CCNGG 2 cut(s) 136, 1980
Bme18I GGWCC 2 cut(s) 84, 545
BmeT110I CYCGRG 1 cut(s) 102
BmgT120I GGNCC 4 cut(s) 84, 132, 545, 659
BmiI GGNNCC 6 cut(s) 86, 183, 189, 490, 1549, 1693
BmrFI CCNGG 2 cut(s) 136, 1980
BmrI ACTGGG 1 cut(s) 1690
BmsI GCATC 4 cut(s) 747, 1398, 1435, 1893
BmtI GCTAGC 1 cut(s) 983
BmuI ACTGGG 1 cut(s) 1690
BpiI GAAGAC 1 cut(s) 204
Bpu14I TTCGAA 1 cut(s) 1202
BpuEI CTTGAG 4 cut(s) 748, 813, 1178, 1978
Bsa29I ATCGAT 1 cut(s) 993
BsaBI GATNNNNATC 1 cut(s) 908
BsaWI WCCGGW 2 cut(s) 190, 1550
BsaXI ACNNNNNCTCC 2 cut(s) 73, 103
Bsc4I CCNNNNNNNGG 9 cut(s) 40, 129, 141, 367, 1052, 1306, 1383, 1743, 1880
Bse118I RCCGGY 2 cut(s) 1550, 1649
Bse1I ACTGG 1 cut(s) 1696
Bse3DI GCAATG 1 cut(s) 1834
Bse8I GATNNNNATC 1 cut(s) 908
BseAI TCCGGA 1 cut(s) 190
BseBI CCWGG 2 cut(s) 136, 1980
BseCI ATCGAT 1 cut(s) 993
BseGI GGATG 4 cut(s) 539, 679, 1413, 1884
BseJI GATNNNNATC 1 cut(s) 908
BseLI CCNNNNNNNGG 9 cut(s) 40, 129, 141, 367, 1052, 1306, 1383, 1743, 1880
BseMI GCAATG 1 cut(s) 1834
BseMII CTCAG 2 cut(s) 299, 2006
BseNI ACTGG 1 cut(s) 1696
BseRI GAGGAG 2 cut(s) 33, 185
BseSI GKGCMC 1 cut(s) 1531
BseXI GCAGC 4 cut(s) 310, 1354, 1915, 1989
BseYI CCCAGC 3 cut(s) 326, 412, 1796
Bsh1236I CGCG 3 cut(s) 36, 73, 79
Bsh1285I CGRYCG 1 cut(s) 77
BshFI GGCC 9 cut(s) 33, 122, 133, 149, 306, 447, 661, 1255, 1299
BshNI GGYRCC 1 cut(s) 488
BshTI ACCGGT 1 cut(s) 1550
BshVI ATCGAT 1 cut(s) 993
BsiEI CGRYCG 1 cut(s) 77
BsiHKAI GWGCWC 2 cut(s) 519, 1578
BsiHKCI CYCGRG 1 cut(s) 102
BsiSI CCGG 5 cut(s) 5, 185, 191, 1551, 1650
BslI CCNNNNNNNGG 9 cut(s) 40, 129, 141, 367, 1052, 1306, 1383, 1743, 1880
BsmAI GTCTC 3 cut(s) 621, 1827, 1991
BsmBI CGTCTC 1 cut(s) 1991
BsnI GGCC 9 cut(s) 33, 122, 133, 149, 306, 447, 661, 1255, 1299
BsoBI CYCGRG 1 cut(s) 102
Bsp119I TTCGAA 1 cut(s) 1202
Bsp1286I GDGCHC 4 cut(s) 519, 1276, 1531, 1578
Bsp13I TCCGGA 1 cut(s) 190
Bsp19I CCATGG 1 cut(s) 1046
BspACI CCGC 9 cut(s) 34, 68, 71, 73, 79, 111, 114, 1832, 1912
BspANI GGCC 9 cut(s) 33, 122, 133, 149, 306, 447, 661, 1255, 1299
BspCNI CTCAG 2 cut(s) 300, 2005
BspDI ATCGAT 1 cut(s) 993
BspEI TCCGGA 1 cut(s) 190
BspFNI CGCG 3 cut(s) 36, 73, 79
BspLI GGNNCC 6 cut(s) 86, 183, 189, 490, 1549, 1693
BspMAI CTGCAG 1 cut(s) 709
BspMI ACCTGC 3 cut(s) 1029, 1381, 1794
BspOI GCTAGC 1 cut(s) 983
BspPI GGATC 5 cut(s) 182, 195, 1243, 1613, 1947
BspQI GCTCTTC 1 cut(s) 1182
BspT104I TTCGAA 1 cut(s) 1202
BspT107I GGYRCC 1 cut(s) 488
BsrDI GCAATG 1 cut(s) 1834
BsrFI RCCGGY 2 cut(s) 1550, 1649
BsrI ACTGG 1 cut(s) 1696
BssAI RCCGGY 2 cut(s) 1550, 1649
BssNAI GTATAC 1 cut(s) 1701
BssT1I CCWWGG 4 cut(s) 577, 856, 1046, 1346
Bst1107I GTATAC 1 cut(s) 1701
Bst2UI CCWGG 2 cut(s) 136, 1980
Bst4CI ACNGT 4 cut(s) 97, 939, 1710, 2089
Bst6I CTCTTC 4 cut(s) 162, 333, 981, 1182
BstBI TTCGAA 1 cut(s) 1202
BstC8I GCNNGC 5 cut(s) 49, 53, 696, 981, 1834
BstDEI CTNAG 4 cut(s) 308, 476, 1145, 1992
BstDSI CCRYGG 3 cut(s) 71, 123, 1046
BstEII GGTNACC 2 cut(s) 384, 1041
BstF5I GGATG 4 cut(s) 539, 679, 1413, 1884
BstFNI CGCG 3 cut(s) 36, 73, 79
BstHHI GCGC 4 cut(s) 38, 1974, 2007, 2085
BstMAI GTCTC 3 cut(s) 621, 1827, 1991
BstMCI CGRYCG 1 cut(s) 77
BstNI CCWGG 2 cut(s) 136, 1980
BstNSI RCATGY 4 cut(s) 655, 901, 1466, 2033
BstPI GGTNACC 2 cut(s) 384, 1041
BstSCI CCNGG 2 cut(s) 134, 1978
BstSFI CTRYAG 2 cut(s) 705, 822
BstSLI GKGCMC 1 cut(s) 1531
BstUI CGCG 3 cut(s) 36, 73, 79
BstV1I GCAGC 4 cut(s) 310, 1354, 1915, 1989
BstV2I GAAGAC 1 cut(s) 204
BstX2I RGATCY 2 cut(s) 187, 1948
BstXI CCANNNNNNTGG 1 cut(s) 558
BstYI RGATCY 2 cut(s) 187, 1948
BstZ17I GTATAC 1 cut(s) 1701
Bsu15I ATCGAT 1 cut(s) 993
BsuRI GGCC 9 cut(s) 33, 122, 133, 149, 306, 447, 661, 1255, 1299
BsuTUI ATCGAT 1 cut(s) 993
BtgI CCRYGG 3 cut(s) 71, 123, 1046
BtgZI GCGATG 1 cut(s) 713
BtsCI GGATG 4 cut(s) 539, 679, 1413, 1884
BtsIMutI CAGTG 3 cut(s) 1729, 1846, 2085
BveI ACCTGC 3 cut(s) 1029, 1381, 1794
Cac8I GCNNGC 5 cut(s) 49, 53, 696, 981, 1834
CfoI GCGC 4 cut(s) 38, 1974, 2007, 2085
Cfr10I RCCGGY 2 cut(s) 1550, 1649
Cfr13I GGNCC 4 cut(s) 84, 132, 545, 659
Cfr42I CCGCGG 1 cut(s) 74
ClaI ATCGAT 1 cut(s) 993
CseI GACGC 2 cut(s) 1550, 2008
CsiI ACCWGGT 1 cut(s) 1978
Csp6I GTAC 5 cut(s) 23, 348, 537, 605, 1370
CspAI ACCGGT 1 cut(s) 1550
CspCI CAANNNNNGTGG 2 cut(s) 1877, 1912
CviQI GTAC 5 cut(s) 23, 348, 537, 605, 1370
DdeI CTNAG 4 cut(s) 308, 476, 1145, 1992
EaeI YGGCCR 3 cut(s) 147, 445, 1297
Eam1104I CTCTTC 4 cut(s) 162, 333, 981, 1182
EarI CTCTTC 4 cut(s) 162, 333, 981, 1182
Ecl136II GAGCTC 1 cut(s) 1576
Eco130I CCWWGG 4 cut(s) 577, 856, 1046, 1346
Eco24I GRGCYC 2 cut(s) 1276, 1578
Eco32I GATATC 1 cut(s) 216
Eco47I GGWCC 2 cut(s) 84, 545
Eco53kI GAGCTC 1 cut(s) 1576
Eco57I CTGAAG 2 cut(s) 672, 1822
Eco88I CYCGRG 1 cut(s) 102
Eco91I GGTNACC 2 cut(s) 384, 1041
EcoICRI GAGCTC 1 cut(s) 1576
EcoO109I RGGNCCY 2 cut(s) 84, 659
EcoO65I GGTNACC 2 cut(s) 384, 1041
EcoRI GAATTC 1 cut(s) 682
EcoRII CCWGG 2 cut(s) 134, 1978
EcoRV GATATC 1 cut(s) 216
EcoT14I CCWWGG 4 cut(s) 577, 856, 1046, 1346
EcoT38I GRGCYC 2 cut(s) 1276, 1578
ErhI CCWWGG 4 cut(s) 577, 856, 1046, 1346
Esp3I CGTCTC 1 cut(s) 1991
FauI CCCGC 1 cut(s) 1825
FauNDI CATATG 1 cut(s) 553
FbaI TGATCA 2 cut(s) 909, 1843
FblI GTMKAC 2 cut(s) 868, 1700
Fnu4HI GCNGC 8 cut(s) 34, 71, 111, 114, 324, 1343, 1929, 2003
FokI GGATG 4 cut(s) 546, 686, 1420, 1871
FriOI GRGCYC 2 cut(s) 1276, 1578
Fsp4HI GCNGC 8 cut(s) 34, 71, 111, 114, 324, 1343, 1929, 2003
FspI TGCGCA 1 cut(s) 2006
GlaI GCGC 4 cut(s) 37, 1973, 2006, 2084
GluI GCNGC 8 cut(s) 34, 71, 111, 114, 324, 1343, 1929, 2003
GsaI CCCAGC 3 cut(s) 330, 416, 1800
HaeIII GGCC 9 cut(s) 33, 122, 133, 149, 306, 447, 661, 1255, 1299
HapII CCGG 5 cut(s) 5, 185, 191, 1551, 1650
HgaI GACGC 2 cut(s) 1550, 2008
HhaI GCGC 4 cut(s) 38, 1974, 2007, 2085
Hin6I GCGC 4 cut(s) 36, 1972, 2005, 2083
HinP1I GCGC 4 cut(s) 36, 1972, 2005, 2083
HincII GTYRAC 2 cut(s) 853, 869
HindII GTYRAC 2 cut(s) 853, 869
HinfI GANTC 6 cut(s) 227, 233, 734, 1001, 1727, 2053
HpaII CCGG 5 cut(s) 5, 185, 191, 1551, 1650
HphI GGTGA 6 cut(s) 139, 232, 378, 1076, 1180, 1994
Hpy166II GTNNAC 5 cut(s) 568, 853, 869, 1171, 1701
Hpy188I TCNGA 4 cut(s) 61, 232, 238, 1968
Hpy8I GTNNAC 5 cut(s) 568, 853, 869, 1171, 1701
Hpy99I CGWCG 1 cut(s) 453
HpyAV CCTTC 6 cut(s) 1348, 1594, 1747, 1760, 1874, 2029
HpyCH4III ACNGT 4 cut(s) 97, 939, 1710, 2089
HpyCH4IV ACGT 1 cut(s) 1894
HpyCH4V TGCA 8 cut(s) 707, 760, 778, 1089, 1448, 1481, 1594, 1931
HpyF3I CTNAG 4 cut(s) 308, 476, 1145, 1992
HpySE526I ACGT 1 cut(s) 1894
HspAI GCGC 4 cut(s) 36, 1972, 2005, 2083
Kpn2I TCCGGA 1 cut(s) 190
Ksp22I TGATCA 2 cut(s) 909, 1843
KspI CCGCGG 1 cut(s) 74
LguI GCTCTTC 1 cut(s) 1182
LmnI GCTCC 3 cut(s) 7, 181, 1800
Lsp1109I GCAGC 4 cut(s) 310, 1354, 1915, 1989
LweI GCATC 4 cut(s) 747, 1398, 1435, 1893
MabI ACCWGGT 1 cut(s) 1978
MaeII ACGT 1 cut(s) 1894
MaeIII GTNAC 6 cut(s) 384, 454, 1041, 1777, 1982, 2075
MflI RGATCY 2 cut(s) 187, 1948
MhlI GDGCHC 4 cut(s) 519, 1276, 1531, 1578
MlsI TGGCCA 1 cut(s) 1299
MluCI AATT 9 cut(s) 158, 509, 682, 744, 799, 1151, 1178, 1392, 2015
MluNI TGGCCA 1 cut(s) 1299
MlyI GAGTC 2 cut(s) 221, 743
MmeI TCCRAC 1 cut(s) 84
Mox20I TGGCCA 1 cut(s) 1299
MroI TCCGGA 1 cut(s) 190
MroXI GAANNNNTTC 2 cut(s) 369, 1770
MscI TGGCCA 1 cut(s) 1299
MseI TTAA 2 cut(s) 507, 1208
MslI CAYNNNNRTG 4 cut(s) 556, 783, 1434, 2030
Msp20I TGGCCA 1 cut(s) 1299
MspA1I CMGCKG 2 cut(s) 73, 1928
MspI CCGG 5 cut(s) 5, 185, 191, 1551, 1650
MspR9I CCNGG 2 cut(s) 136, 1980
MvaI CCWGG 2 cut(s) 136, 1980
MvnI CGCG 3 cut(s) 36, 73, 79
NcoI CCATGG 1 cut(s) 1046
NdeI CATATG 1 cut(s) 553
NheI GCTAGC 1 cut(s) 979
NlaIV GGNNCC 6 cut(s) 86, 183, 189, 490, 1549, 1693
NmeAIII GCCGAG 2 cut(s) 53, 142
NmuCI GTSAC 3 cut(s) 384, 1777, 1982
NsbI TGCGCA 1 cut(s) 2006
NspI RCATGY 4 cut(s) 655, 901, 1466, 2033
NspV TTCGAA 1 cut(s) 1202
OliI CACNNNNGTG 1 cut(s) 2030
PaqCI CACCTGC 1 cut(s) 1794
PciI ACATGT 2 cut(s) 1462, 2029
PciSI GCTCTTC 1 cut(s) 1182
PdmI GAANNNNTTC 2 cut(s) 369, 1770
PfeI GAWTC 4 cut(s) 233, 1001, 1727, 2053
PflFI GACNNNGTC 1 cut(s) 864
PflMI CCANNNNNTGG 1 cut(s) 1383
PinAI ACCGGT 1 cut(s) 1550
PkrI GCNGC 8 cut(s) 35, 72, 112, 115, 325, 1344, 1930, 2004
PleI GAGTC 2 cut(s) 221, 742
PpsI GAGTC 2 cut(s) 221, 742
PpuMI RGGWCCY 1 cut(s) 84
PscI ACATGT 2 cut(s) 1462, 2029
PsiI TTATAA 2 cut(s) 612, 1496
Psp124BI GAGCTC 1 cut(s) 1578
Psp5II RGGWCCY 1 cut(s) 84
Psp6I CCWGG 2 cut(s) 134, 1978
PspEI GGTNACC 2 cut(s) 384, 1041
PspFI CCCAGC 3 cut(s) 326, 412, 1796
PspGI CCWGG 2 cut(s) 134, 1978
PspN4I GGNNCC 6 cut(s) 86, 183, 189, 490, 1549, 1693
PspPI GGNCC 4 cut(s) 84, 132, 545, 659
PspPPI RGGWCCY 1 cut(s) 84
PsrI GAACNNNNNNTAC 4 cut(s) 1540, 1572, 1684, 1716
PstI CTGCAG 1 cut(s) 709
PsuI RGATCY 2 cut(s) 187, 1948
PsyI GACNNNGTC 1 cut(s) 864
PvuII CAGCTG 1 cut(s) 1928
RsaI GTAC 5 cut(s) 24, 349, 538, 606, 1371
RsaNI GTAC 5 cut(s) 23, 348, 537, 605, 1370
RseI CAYNNNNRTG 4 cut(s) 556, 783, 1434, 2030
SacI GAGCTC 1 cut(s) 1578
SacII CCGCGG 1 cut(s) 74
SalI GTCGAC 1 cut(s) 867
SapI GCTCTTC 1 cut(s) 1182
SaqAI TTAA 2 cut(s) 507, 1208
SatI GCNGC 8 cut(s) 34, 71, 111, 114, 324, 1343, 1929, 2003
Sau96I GGNCC 4 cut(s) 84, 132, 545, 659
ScaI AGTACT 1 cut(s) 349
SchI GAGTC 2 cut(s) 221, 743
ScrFI CCNGG 2 cut(s) 136, 1980
SduI GDGCHC 4 cut(s) 519, 1276, 1531, 1578
SexAI ACCWGGT 1 cut(s) 1978
SfaNI GCATC 4 cut(s) 747, 1398, 1435, 1893
SfcI CTRYAG 2 cut(s) 705, 822
Sfr303I CCGCGG 1 cut(s) 74
SfuI TTCGAA 1 cut(s) 1202
SgrBI CCGCGG 1 cut(s) 74
SinI GGWCC 2 cut(s) 84, 545
SmiMI CAYNNNNRTG 4 cut(s) 556, 783, 1434, 2030
SmlI CTYRAG 4 cut(s) 763, 828, 1157, 1957
SmoI CTYRAG 4 cut(s) 763, 828, 1157, 1957
SpeI ACTAGT 1 cut(s) 886
Sse9I AATT 9 cut(s) 158, 509, 682, 744, 799, 1151, 1178, 1392, 2015
SsiI CCGC 9 cut(s) 34, 68, 71, 73, 79, 111, 114, 1832, 1912
SstI GAGCTC 1 cut(s) 1578
StyD4I CCNGG 2 cut(s) 134, 1978
StyI CCWWGG 4 cut(s) 577, 856, 1046, 1346
TaaI ACNGT 4 cut(s) 97, 939, 1710, 2089
TaiI ACGT 1 cut(s) 1897
TaqI TCGA 9 cut(s) 264, 513, 732, 868, 993, 1202, 1323, 1922, 1942
TasI AATT 9 cut(s) 158, 509, 682, 744, 799, 1151, 1178, 1392, 2015
TatI WGTACW 3 cut(s) 347, 536, 604
TauI GCSGC 4 cut(s) 36, 73, 113, 116
TfiI GAWTC 4 cut(s) 233, 1001, 1727, 2053
Tru1I TTAA 2 cut(s) 507, 1208
Tru9I TTAA 2 cut(s) 507, 1208
TscAI CASTG 3 cut(s) 1729, 1846, 2092
TseFI GTSAC 3 cut(s) 384, 1777, 1982
TseI GCWGC 4 cut(s) 323, 1342, 1928, 2002
Tsp45I GTSAC 3 cut(s) 384, 1777, 1982
TspDTI ATGAA 5 cut(s) 946, 1190, 1200, 1430, 1763
TspRI CASTG 3 cut(s) 1729, 1846, 2092
Tth111I GACNNNGTC 1 cut(s) 864
Van91I CCANNNNNTGG 1 cut(s) 1383
VpaK11BI GGWCC 2 cut(s) 84, 545
XapI RAATTY 4 cut(s) 509, 682, 799, 1178
XbaI TCTAGA 1 cut(s) 748
XceI RCATGY 4 cut(s) 655, 901, 1466, 2033
XcmI CCANNNNNNNNNTGG 1 cut(s) 142
XmiI GTMKAC 2 cut(s) 868, 1700
XmnI GAANNNNTTC 2 cut(s) 369, 1770
ZrmI AGTACT 1 cut(s) 349
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.