Rroxscaffold_1G00002180

Protein kinase domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
OG0011667
Physical Location & Seq
Forward (+)
2614037 .. 2623772
9736 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00002180.1

Sequence Viewer

Length: 2163 bp
ATGCCGGAGCTTCGAAAAGGTGTCCGCCGAGGTCGTGCTAGGGTAGCTCACAAGCCGTCGGACCCCCCGCCGCCTCCGTCTCGAAGGACGCGTGCCACGGTCGCGAGGCAGGTAGCTGAGGCTGTGGTCAGGCCGAGGACGAGGTTGGCCGTGAAAAAGCTGAAGGAGGAGGAGGTGCTGCCGGAGCCGGAGAAGGAGAAGGAGAAGGACCGCGTGATTGTGATTTCGGAGAAGGAAGACTCCGATTCGGAGGGTGAAAGGGAGGAAGAAGAAGTAGAAGAAGAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAAGAAGAAGAAGAAGAAGAAGAAGAGAACAAAGCTGTGATGGCTGACGATAGTGGTGGCTTGAGTGCTAACAAGGCTGCTGGGCAAGAAGAAGAGGGCAGTACGGCGCCGTTTCCTGAAAAGGTTCAAGTAGGAGGATCGCCGCAATATAAGGTGGAAAGGAAGCTTGGCAAAGGTGGCTTTGGTCAGGTGTTTGTTGGTCGTCGCGTTACAGGTGGAGTTGACCGAACAAGTGGTCCTGGTGCTATTGAGGTAGCACTGAAATTCGAGCACAGAAATAGTAAAGGCTGCAGCTATGGTCCTCCATATGAGTGGCAAGTTTACAACACTCTTGGTGGTAGTCATGGAGTTCCCAGAGTCCATTATAAAGGAAAGCAAGGGGACTATTATGTAATGGTTATGGACATGCTAGGACCTAGTTTATGGGATGTATGGAATACTTCAGGGCAAGCGATGTCTGCAGAAATGGTAGCTTGTATAGCTGTTGAGTCTTTATCGATTCTGGAGAAGATGCACTCTAGAGGGTATGTGCATGGAGATGTAAAGCCAGAGAACTTTTTGCTTGGTCAGCCATCTACTGCTCAAGAGAAGAAATTGTATCTTGTTGACCTCGGATTAGCAACAAAGTGGAAAGACAGCTCAAGTGGGCTTCATGTTGAATATGATCAACGTCCTGATATGTTTAGAGGAACTGTTCGATATGCTAGTGTTCATGCTCACTTGGGAAGAACTGCTAGTAGACGAGATGACCTCGAATCACTTGCTTATACACTTATTTTTCTCCATCGAGGAAGGTTGCCATGGCAGGGGTATCAGGGTGATAACAAATCTTTCCTAGTTTGTAAAAAGAAGATGGCAACATCACCTGAAATGCTGTGCTGTTTCTGCCCCGCAGCTCTAAGACAATTTCTTGAGATCGTGGTGAACATGAAATTTGATGAAGAGCCTAACTATTCAAAATTAATATCACTGTTTGAGGGATTGATAGGAACAAATCCTGCTGTAAGACCATTAAAAATTGATGGTGCTCAGAAGATTATTAGCCAGGTTGGCCAGAAACGGGGTAGATTGAATATTGAGGAAGATGATGACGGGCAGCCAAGGAAGAAGGTTCGGCTAGGAGTACCTGCTACACAATGGATTTCAATTTACAATGCTCGGATGCCAATGAAACAAAGGTATCATTACAACGTCGCTGATGCAAGGTTGGCACAACATGTGGAGAGAGGAATTGCAGATGGTCTGCTTATAAGTTGCGTGTCTTCGTGTTCTAATCTCTGGGCACTTATTATGGATGCTGGAACGGGTTTTTCAAACCAAGTTTATGAGCTTTCTCCCTTCTTCTTGCACAAGGAATGGATAATGGAACAGTGGGAAAAGAATTATTACATTAGTTCTATTGCTGGTGCTAACAATGGGAGTTCCCTTGTGGTGATGTCCAAAGGAACCCAGTACACTCAACAGTCTTACAAAGTGAGCGATTCTTTCCCCTTCAAGTGGATAAACAAAAAGTGGAGGGAAGGTTTTCATGTAACTTCAATGGCAACTGCTGGGAGCCGGTGGGGTGTTGTAATGTCTAGGAATGCTGGCTTCAGTGATCAGGTTGTGGAGCTTGATTTTCTCTATCCAAGTGAAGGCATCCACAGGCGTTGGGATAATGGTTTCCGGATAACATCAACAGCTGCAACCTGGGATCAAGCGGCTCTTATCTTGAGTGTTCCCAAGCGCAAACCTGGTGATGAAACACAGGAGACCCTGCGTACATCACAATTTCCTAGCACACATGTCAAGGAAAAATGGGCAAAGAATCTGTATCTTGCTTGTTTGTGCTATGGACGTACCGTATCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04011 ko04392 map04011 map04392
Pfam Domains
Protein Families
Pkinase

Protein Analysis

720

Amino Acids

81.13

Weight (kDa)

6.31

Isoelectric Point (pI)

56.17

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 154 - 389 2.5e-17 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 155 - 426 5.2e-07 Protein tyrosine and serine/threonine kinase
Pkinase_fungal PF17667 267 - 364 4.1e-07 Fungal protein kinase
DUF7477 PF24289 453 - 720 1.8e-162 Domain of unknown function (DUF7477)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0011667)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G13670
fragaria_vesca FvH4_3g44690
malus_domestica MD03G1011500.v1.1 MD11G1014200.v1.1
prunus_persica Prupe.6G011900_v2.0.a1 Prupe.6G011900_v2.0.a1 Prupe.6G011900_v2.0.a1
pyrus_communis pycom03g01040 pycom11g00960
rosa_chinensis RchiOBHm_Chr5g0081361
rosa_laevigata RLG00000036927
rosa_multiflora Rmu_sc0007768.1_g000010 Rmu_sc0009187.1_g000017
rosa_roxburghii Rroxscaffold_1G00002180
rosa_rugosa Rorug05G0476000
rosa_samantha Rh5AG527400 Rh5BG551600 Rh5CG574400
rosa_wichuraiana Rw5G049050

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 678, 1562
Acc36I ACCTGC 2 cut(s) 100, 1447
AccB1I GGYRCC 1 cut(s) 418
AccI GTMKAC 1 cut(s) 1051
AccII CGCG 4 cut(s) 91, 104, 213, 519
AccIII TCCGGA 1 cut(s) 1977
AciI CCGC 7 cut(s) 25, 68, 71, 211, 455, 1203, 2012
AclWI GGATC 2 cut(s) 457, 2013
AcoI YGGCCR 2 cut(s) 147, 1363
AcsI RAATTY 2 cut(s) 575, 1244
AcuI CTGAAG 3 cut(s) 182, 738, 1888
AcyI GRCGYC 1 cut(s) 419
AfaI GTAC 5 cut(s) 415, 1437, 1766, 2074, 2152
AfiI CCNNNNNNNGG 4 cut(s) 1118, 1372, 1809, 1946
AflIII ACRYGT 3 cut(s) 89, 1528, 2095
AgsI TTSAA 8 cut(s) 440, 971, 1269, 1384, 1458, 1626, 1807, 1851
AjnI CCWGG 4 cut(s) 550, 1356, 2000, 2044
AjuI GAANNNNNNNTTGG 2 cut(s) 462, 494
AloI GAACNNNNNNTCC 2 cut(s) 532, 564
Alw21I GWGCWC 2 cut(s) 585, 1342
Alw26I GTCTC 2 cut(s) 84, 2057
AlwI GGATC 2 cut(s) 457, 2013
Aor13HI TCCGGA 1 cut(s) 1977
AoxI GGCC 3 cut(s) 131, 147, 1363
ApeKI GCWGC 7 cut(s) 178, 389, 600, 603, 1205, 1408, 1994
ApoI RAATTY 2 cut(s) 575, 1244
ArsI GACNNNNNNTTYG 2 cut(s) 532, 564
AseI ATTAAT 1 cut(s) 1274
Asp700I GAANNNNTTC 2 cut(s) 435, 1836
AspLEI GCGC 2 cut(s) 421, 2040
AspS9I GGNCC 5 cut(s) 61, 208, 548, 611, 725
AsuHPI GGTGA 6 cut(s) 266, 1142, 1167, 1246, 1756, 2060
AsuII TTCGAA 1 cut(s) 13
AvaII GGWCC 5 cut(s) 61, 208, 548, 611, 725
BaeGI GKGCMC 1 cut(s) 1597
BaeI ACNNNNGTAYC 2 cut(s) 1475, 1508
BalI TGGCCA 1 cut(s) 1365
BanI GGYRCC 1 cut(s) 418
BbsI GAAGAC 2 cut(s) 243, 1566
Bbv12I GWGCWC 2 cut(s) 585, 1342
BbvCI CCTCAGC 1 cut(s) 117
BbvI GCAGC 7 cut(s) 165, 376, 587, 615, 1217, 1420, 1981
BccI CCATC 6 cut(s) 346, 892, 1104, 1159, 1328, 1544
BceAI ACGGC 4 cut(s) 40, 134, 406, 432
BcgI CGANNNNNNTGC 2 cut(s) 1055, 1089
BciT130I CCWGG 4 cut(s) 552, 1358, 2002, 2046
BclI TGATCA 2 cut(s) 976, 1909
BcoDI GTCTC 2 cut(s) 84, 2057
BfmI CTRYAG 2 cut(s) 601, 771
BfoI RGCGCY 1 cut(s) 422
BfuAI ACCTGC 2 cut(s) 100, 1447
BglI GCCNNNNNGGC 1 cut(s) 1362
Bme1390I CCNGG 4 cut(s) 552, 1358, 2002, 2046
Bme18I GGWCC 5 cut(s) 61, 208, 548, 611, 725
BmgT120I GGNCC 5 cut(s) 61, 208, 548, 611, 725
BmiI GGNNCC 5 cut(s) 63, 186, 420, 1759, 1868
BmrFI CCNGG 4 cut(s) 552, 1358, 2002, 2046
BmrI ACTGGG 1 cut(s) 1756
BmsI GCATC 5 cut(s) 813, 1464, 1501, 1597, 1959
BmuI ACTGGG 1 cut(s) 1756
BpiI GAAGAC 2 cut(s) 243, 1566
BplI GAGNNNNNCTC 2 cut(s) 1047, 1079
BpmI CTGGAG 1 cut(s) 836
Bpu10I CCTNAGC 1 cut(s) 117
Bpu14I TTCGAA 1 cut(s) 13
BpuEI CTTGAG 5 cut(s) 394, 879, 937, 1244, 2044
Bsa29I ATCGAT 1 cut(s) 809
BsaHI GRCGYC 1 cut(s) 419
BsaI GGTCTC 1 cut(s) 2057
BsaJI CCNNGG 7 cut(s) 28, 96, 134, 922, 1112, 1412, 2001
BsaWI WCCGGW 1 cut(s) 1977
BsaXI ACNNNNNCTCC 2 cut(s) 1819, 1849
Bsc4I CCNNNNNNNGG 4 cut(s) 1118, 1372, 1809, 1946
Bse118I RCCGGY 1 cut(s) 1869
Bse1I ACTGG 1 cut(s) 1762
BseAI TCCGGA 1 cut(s) 1977
BseBI CCWGG 4 cut(s) 552, 1358, 2002, 2046
BseCI ATCGAT 1 cut(s) 809
BseDI CCNNGG 7 cut(s) 28, 96, 134, 922, 1112, 1412, 2001
BseGI GGATG 4 cut(s) 745, 1479, 1612, 1950
BseLI CCNNNNNNNGG 4 cut(s) 1118, 1372, 1809, 1946
BseMII CTCAG 2 cut(s) 108, 1355
BseNI ACTGG 1 cut(s) 1762
BseSI GKGCMC 1 cut(s) 1597
BseXI GCAGC 7 cut(s) 165, 376, 587, 615, 1217, 1420, 1981
BseYI CCCAGC 2 cut(s) 392, 1862
Bsh1236I CGCG 4 cut(s) 91, 104, 213, 519
Bsh1285I CGRYCG 1 cut(s) 102
BshFI GGCC 3 cut(s) 133, 149, 1365
BshNI GGYRCC 1 cut(s) 418
BshVI ATCGAT 1 cut(s) 809
BsiEI CGRYCG 1 cut(s) 102
BsiHKAI GWGCWC 2 cut(s) 585, 1342
BsiSI CCGG 5 cut(s) 5, 182, 188, 1870, 1978
BslFI GGGAC 1 cut(s) 707
BslI CCNNNNNNNGG 4 cut(s) 1118, 1372, 1809, 1946
BsmAI GTCTC 2 cut(s) 84, 2057
BsmBI CGTCTC 1 cut(s) 84
BsmFI GGGAC 1 cut(s) 707
BsmI GAATGC 1 cut(s) 1900
BsnI GGCC 3 cut(s) 133, 149, 1365
Bso31I GGTCTC 1 cut(s) 2057
Bsp119I TTCGAA 1 cut(s) 13
Bsp1286I GDGCHC 3 cut(s) 585, 1342, 1597
Bsp13I TCCGGA 1 cut(s) 1977
Bsp143I GATC 5 cut(s) 449, 976, 1227, 1909, 2005
Bsp19I CCATGG 1 cut(s) 1112
Bsp68I TCGCGA 1 cut(s) 104
BspACI CCGC 7 cut(s) 25, 68, 71, 211, 455, 1203, 2012
BspANI GGCC 3 cut(s) 133, 149, 1365
BspCNI CTCAG 2 cut(s) 109, 1354
BspDI ATCGAT 1 cut(s) 809
BspEI TCCGGA 1 cut(s) 1977
BspFNI CGCG 4 cut(s) 91, 104, 213, 519
BspLI GGNNCC 5 cut(s) 63, 186, 420, 1759, 1868
BspMAI CTGCAG 2 cut(s) 605, 775
BspMI ACCTGC 2 cut(s) 100, 1447
BspPI GGATC 2 cut(s) 457, 2013
BspQI GCTCTTC 1 cut(s) 1248
BspT104I TTCGAA 1 cut(s) 13
BspT107I GGYRCC 1 cut(s) 418
BspTNI GGTCTC 1 cut(s) 2057
BsrFI RCCGGY 1 cut(s) 1869
BsrI ACTGG 1 cut(s) 1762
BssAI RCCGGY 1 cut(s) 1869
BssECI CCNNGG 7 cut(s) 28, 96, 134, 922, 1112, 1412, 2001
BssMI GATC 5 cut(s) 449, 976, 1227, 1909, 2005
BssNI GRCGYC 1 cut(s) 419
BssT1I CCWWGG 2 cut(s) 1112, 1412
Bst2UI CCWGG 4 cut(s) 552, 1358, 2002, 2046
Bst4CI ACNGT 6 cut(s) 100, 1006, 1284, 1683, 1776, 2155
Bst6I CTCTTC 4 cut(s) 279, 330, 399, 1248
BstACI GRCGYC 1 cut(s) 419
BstBI TTCGAA 1 cut(s) 13
BstC8I GCNNGC 3 cut(s) 93, 762, 1900
BstDEI CTNAG 3 cut(s) 117, 1211, 1341
BstDSI CCRYGG 2 cut(s) 96, 1112
BstF5I GGATG 4 cut(s) 745, 1479, 1612, 1950
BstFNI CGCG 4 cut(s) 91, 104, 213, 519
BstH2I RGCGCY 1 cut(s) 422
BstHHI GCGC 2 cut(s) 421, 2040
BstKTI GATC 5 cut(s) 452, 979, 1230, 1912, 2008
BstMAI GTCTC 2 cut(s) 84, 2057
BstMBI GATC 5 cut(s) 449, 976, 1227, 1909, 2005
BstMCI CGRYCG 1 cut(s) 102
BstNI CCWGG 4 cut(s) 552, 1358, 2002, 2046
BstNSI RCATGY 3 cut(s) 721, 1532, 2099
BstSCI CCNGG 4 cut(s) 550, 1356, 2000, 2044
BstSFI CTRYAG 2 cut(s) 601, 771
BstSLI GKGCMC 1 cut(s) 1597
BstUI CGCG 4 cut(s) 91, 104, 213, 519
BstV1I GCAGC 7 cut(s) 165, 376, 587, 615, 1217, 1420, 1981
BstV2I GAAGAC 2 cut(s) 243, 1566
BstXI CCANNNNNNTGG 1 cut(s) 624
Bsu15I ATCGAT 1 cut(s) 809
BsuRI GGCC 3 cut(s) 133, 149, 1365
BsuTUI ATCGAT 1 cut(s) 809
BtgI CCRYGG 2 cut(s) 96, 1112
BtgZI GCGATG 1 cut(s) 779
BtsCI GGATG 4 cut(s) 745, 1479, 1612, 1950
BtsIMutI CAGTG 4 cut(s) 569, 1280, 1688, 1912
BtuMI TCGCGA 1 cut(s) 104
BveI ACCTGC 2 cut(s) 100, 1447
Cac8I GCNNGC 3 cut(s) 93, 762, 1900
CfoI GCGC 2 cut(s) 421, 2040
Cfr10I RCCGGY 1 cut(s) 1869
Cfr13I GGNCC 5 cut(s) 61, 208, 548, 611, 725
ClaI ATCGAT 1 cut(s) 809
CseI GACGC 1 cut(s) 97
CsiI ACCWGGT 1 cut(s) 2044
Csp6I GTAC 5 cut(s) 414, 1436, 1765, 2073, 2151
CspCI CAANNNNNGTGG 2 cut(s) 1943, 1978
CviQI GTAC 5 cut(s) 414, 1436, 1765, 2073, 2151
DdeI CTNAG 3 cut(s) 117, 1211, 1341
DinI GGCGCC 1 cut(s) 420
DpnI GATC 5 cut(s) 451, 978, 1229, 1911, 2007
DpnII GATC 5 cut(s) 449, 976, 1227, 1909, 2005
EaeI YGGCCR 2 cut(s) 147, 1363
Eam1104I CTCTTC 4 cut(s) 279, 330, 399, 1248
EarI CTCTTC 4 cut(s) 279, 330, 399, 1248
EciI GGCGGA 1 cut(s) 14
Eco130I CCWWGG 2 cut(s) 1112, 1412
Eco31I GGTCTC 1 cut(s) 2057
Eco47I GGWCC 5 cut(s) 61, 208, 548, 611, 725
Eco57I CTGAAG 3 cut(s) 182, 738, 1888
EcoO109I RGGNCCY 1 cut(s) 725
EcoRII CCWGG 4 cut(s) 550, 1356, 2000, 2044
EcoT14I CCWWGG 2 cut(s) 1112, 1412
EgeI GGCGCC 1 cut(s) 420
EheI GGCGCC 1 cut(s) 420
ErhI CCWWGG 2 cut(s) 1112, 1412
Esp3I CGTCTC 1 cut(s) 84
FalI AAGNNNNNCTT 2 cut(s) 2001, 2033
FaqI GGGAC 1 cut(s) 707
FauI CCCGC 2 cut(s) 75, 1210
FauNDI CATATG 1 cut(s) 619
FbaI TGATCA 2 cut(s) 976, 1909
FblI GTMKAC 1 cut(s) 1051
FokI GGATG 4 cut(s) 752, 1486, 1619, 1937
GlaI GCGC 2 cut(s) 420, 2039
GsaI CCCAGC 2 cut(s) 396, 1866
GsuI CTGGAG 1 cut(s) 836
HaeII RGCGCY 1 cut(s) 422
HaeIII GGCC 3 cut(s) 133, 149, 1365
HapII CCGG 5 cut(s) 5, 182, 188, 1870, 1978
HgaI GACGC 1 cut(s) 97
HhaI GCGC 2 cut(s) 421, 2040
Hin1I GRCGYC 1 cut(s) 419
Hin6I GCGC 2 cut(s) 419, 2038
HinP1I GCGC 2 cut(s) 419, 2038
HincII GTYRAC 2 cut(s) 535, 919
HindII GTYRAC 2 cut(s) 535, 919
HindIII AAGCTT 1 cut(s) 476
HinfI GANTC 8 cut(s) 239, 245, 669, 800, 811, 1067, 1793, 2119
HpaII CCGG 5 cut(s) 5, 182, 188, 1870, 1978
HphI GGTGA 6 cut(s) 266, 1142, 1167, 1246, 1756, 2060
Hpy166II GTNNAC 6 cut(s) 535, 634, 919, 1052, 1237, 1767
Hpy188I TCNGA 7 cut(s) 61, 229, 244, 250, 926, 1344, 1473
Hpy8I GTNNAC 6 cut(s) 535, 634, 919, 1052, 1237, 1767
Hpy99I CGWCG 3 cut(s) 61, 519, 1508
HpyCH4III ACNGT 6 cut(s) 100, 1006, 1284, 1683, 1776, 2155
HpyCH4IV ACGT 3 cut(s) 982, 1503, 2149
HpyCH4V TGCA 8 cut(s) 603, 773, 826, 844, 1514, 1547, 1660, 1997
HpyF3I CTNAG 3 cut(s) 117, 1211, 1341
HpySE526I ACGT 3 cut(s) 982, 1503, 2149
Hsp92I GRCGYC 1 cut(s) 419
HspAI GCGC 2 cut(s) 419, 2038
KasI GGCGCC 1 cut(s) 418
Kpn2I TCCGGA 1 cut(s) 1977
Ksp22I TGATCA 2 cut(s) 976, 1909
Kzo9I GATC 5 cut(s) 449, 976, 1227, 1909, 2005
LguI GCTCTTC 1 cut(s) 1248
LmnI GCTCC 4 cut(s) 7, 184, 1866, 1921
Lsp1109I GCAGC 7 cut(s) 165, 376, 587, 615, 1217, 1420, 1981
LweI GCATC 5 cut(s) 813, 1464, 1501, 1597, 1959
MabI ACCWGGT 1 cut(s) 2044
MaeII ACGT 3 cut(s) 982, 1503, 2149
MaeIII GTNAC 2 cut(s) 520, 1843
MalI GATC 5 cut(s) 451, 978, 1229, 1911, 2007
MboI GATC 5 cut(s) 449, 976, 1227, 1909, 2005
MhlI GDGCHC 3 cut(s) 585, 1342, 1597
MlsI TGGCCA 1 cut(s) 1365
MluI ACGCGT 1 cut(s) 89
MluNI TGGCCA 1 cut(s) 1365
Mly113I GGCGCC 1 cut(s) 419
MlyI GAGTC 3 cut(s) 233, 678, 809
MmeI TCCRAC 1 cut(s) 39
Mox20I TGGCCA 1 cut(s) 1365
MroI TCCGGA 1 cut(s) 1977
MroXI GAANNNNTTC 2 cut(s) 435, 1836
MscI TGGCCA 1 cut(s) 1365
MseI TTAA 3 cut(s) 1274, 1325, 2161
MslI CAYNNNNRTG 2 cut(s) 622, 849
Msp20I TGGCCA 1 cut(s) 1365
MspA1I CMGCKG 1 cut(s) 1994
MspI CCGG 5 cut(s) 5, 182, 188, 1870, 1978
MspR9I CCNGG 4 cut(s) 552, 1358, 2002, 2046
Mva1269I GAATGC 1 cut(s) 1900
MvaI CCWGG 4 cut(s) 552, 1358, 2002, 2046
MvnI CGCG 4 cut(s) 91, 104, 213, 519
NarI GGCGCC 1 cut(s) 419
NcoI CCATGG 1 cut(s) 1112
NdeI CATATG 1 cut(s) 619
NdeII GATC 5 cut(s) 449, 976, 1227, 1909, 2005
NlaIV GGNNCC 5 cut(s) 63, 186, 420, 1759, 1868
NmeAIII GCCGAG 2 cut(s) 53, 159
NruI TCGCGA 1 cut(s) 104
NspI RCATGY 3 cut(s) 721, 1532, 2099
NspV TTCGAA 1 cut(s) 13
PciI ACATGT 2 cut(s) 1528, 2095
PciSI GCTCTTC 1 cut(s) 1248
PcsI WCGNNNNNNNCGW 1 cut(s) 88
PctI GAATGC 1 cut(s) 1900
PdmI GAANNNNTTC 2 cut(s) 435, 1836
PfeI GAWTC 5 cut(s) 245, 811, 1067, 1793, 2119
PleI GAGTC 3 cut(s) 233, 677, 808
PluTI GGCGCC 1 cut(s) 422
PpsI GAGTC 3 cut(s) 233, 677, 808
PpuMI RGGWCCY 1 cut(s) 725
PscI ACATGT 2 cut(s) 1528, 2095
PshBI ATTAAT 1 cut(s) 1274
PsiI TTATAA 2 cut(s) 678, 1562
Psp5II RGGWCCY 1 cut(s) 725
Psp6I CCWGG 4 cut(s) 550, 1356, 2000, 2044
PspFI CCCAGC 2 cut(s) 392, 1862
PspGI CCWGG 4 cut(s) 550, 1356, 2000, 2044
PspN4I GGNNCC 5 cut(s) 63, 186, 420, 1759, 1868
PspPI GGNCC 5 cut(s) 61, 208, 548, 611, 725
PspPPI RGGWCCY 1 cut(s) 725
PstI CTGCAG 2 cut(s) 605, 775
PvuII CAGCTG 1 cut(s) 1994
RruI TCGCGA 1 cut(s) 104
RsaI GTAC 5 cut(s) 415, 1437, 1766, 2074, 2152
RsaNI GTAC 5 cut(s) 414, 1436, 1765, 2073, 2151
RseI CAYNNNNRTG 2 cut(s) 622, 849
SapI GCTCTTC 1 cut(s) 1248
SaqAI TTAA 3 cut(s) 1274, 1325, 2161
Sau3AI GATC 5 cut(s) 449, 976, 1227, 1909, 2005
Sau96I GGNCC 5 cut(s) 61, 208, 548, 611, 725
SchI GAGTC 3 cut(s) 233, 678, 809
ScrFI CCNGG 4 cut(s) 552, 1358, 2002, 2046
SduI GDGCHC 3 cut(s) 585, 1342, 1597
SexAI ACCWGGT 1 cut(s) 2044
SfaNI GCATC 5 cut(s) 813, 1464, 1501, 1597, 1959
SfcI CTRYAG 2 cut(s) 601, 771
SfoI GGCGCC 1 cut(s) 420
SfuI TTCGAA 1 cut(s) 13
SinI GGWCC 5 cut(s) 61, 208, 548, 611, 725
SmiMI CAYNNNNRTG 2 cut(s) 622, 849
SmlI CTYRAG 5 cut(s) 373, 894, 952, 1223, 2023
SmoI CTYRAG 5 cut(s) 373, 894, 952, 1223, 2023
SsiI CCGC 7 cut(s) 25, 68, 71, 211, 455, 1203, 2012
SspDI GGCGCC 1 cut(s) 418
SspI AATATT 1 cut(s) 1387
StyD4I CCNGG 4 cut(s) 550, 1356, 2000, 2044
StyI CCWWGG 2 cut(s) 1112, 1412
TaaI ACNGT 6 cut(s) 100, 1006, 1284, 1683, 1776, 2155
TaiI ACGT 3 cut(s) 985, 1506, 2152
TaqI TCGA 7 cut(s) 13, 82, 579, 809, 1009, 1065, 1099
TaqII GACCGA 1 cut(s) 552
TatI WGTACW 1 cut(s) 1764
TauI GCSGC 3 cut(s) 73, 457, 2015
TfiI GAWTC 5 cut(s) 245, 811, 1067, 1793, 2119
Tru1I TTAA 3 cut(s) 1274, 1325, 2161
Tru9I TTAA 3 cut(s) 1274, 1325, 2161
TscAI CASTG 4 cut(s) 576, 1287, 1688, 1912
TseI GCWGC 7 cut(s) 178, 389, 600, 603, 1205, 1408, 1994
TspDTI ATGAA 7 cut(s) 953, 1013, 1256, 1266, 1496, 1829, 2067
TspGWI ACGGA 1 cut(s) 66
TspRI CASTG 4 cut(s) 576, 1287, 1688, 1912
VpaK11BI GGWCC 5 cut(s) 61, 208, 548, 611, 725
VspI ATTAAT 1 cut(s) 1274
XapI RAATTY 2 cut(s) 575, 1244
XbaI TCTAGA 1 cut(s) 830
XceI RCATGY 3 cut(s) 721, 1532, 2099
XmiI GTMKAC 1 cut(s) 1051
XmnI GAANNNNTTC 2 cut(s) 435, 1836
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.