RchiOBHm_Chr5g0081361

Protein kinase domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
OG0011667
Physical Location & Seq
Reverse (-)
87327009 .. 87333520
6512 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ35561

Sequence Viewer

Length: 2154 bp
ATGCCGGAGCTTCGAAAAGGTGTCCGCCGAGGTCGTGCTAGGGTAGCTCACAAGCCGTCGGACCCCCCGCCGCCGCCGCCTCCGTCTCGAAGGACGCGTGCCACGGTCGCGAGGCAGGTAGCTGAGGCTGTGGTCAGGCCGAGGACGAGATTGGCTGTGAAAAAGCTGAAGGAGGAGGAGGTGCTGCCGGAGCCGGAGAAGGAGAACGAGAAGGACCGCGTGATTGTGATTTCGGAGAAGGAAGACTCCGATTCGGAGGGTGAAAGGGAGGAAGAAGAAGTAGAAGAAGAGGAGGAGGAGGAGGAGGAGGAGGAAGAAGAAGAAGAAGAGAACAAAGCTGTGATGGCTGACGATAGTGGTGGCTTGAGTGCTAATAAGGCTGCTGGGCAAGAAGAAGAGGGCAGTACGGCGCCGTTTCCTGAAAAGGTTCAAGTAGGAGGATCGCCGCAATATAAGGTGGAAAGGAAGCTTGGCAAAGGTGGCTTTGGTCAGGTGTTCGTTGGTCGTCGTGTTACAGGTGGAGTTGACCGAACAAGTGGTCCTGGTGCTATCGAGGTAGCACTGAAATTCGAGCACAGAAATAGTAAAGGCTGCAGCTATGGTCCTCCATATGAGTGGCAAGTTTACAACACTCTTGGTGGTAGTCATGGAGTTCCCAGAGTACATTATAAAGGAAAGCAAGGGGACTATTATGTAATGGTTATGGACATGCTAGGACCTAGTTTATGGGATGTATGGAATACTTCAGGGCAAGCGATGTCTGCAGAAATGGTAGCTTGTATAGCTGTTGAGTCTTTATCGATTCTGGAGAAGATGCACTCTAGAGGGTATGTGCATGGAGATGTAAAGCCAGAGAACTTTTTGCTTGGTCAGCCATCTACCGCTCAAGAGAAGAAATTGTATCTTGTTGACCTCGGATTAGCAACAAAGTGGAAAGACAGCTCAAGTGGGCTTCATGTTGAATATGATCAACGTCCTGATATGTTTAGAGGAACTGTTCGATATGCTAGTGTTCATGCTCACTTGGGAAGAACTGCTAGTAGACGAGATGACCTCGAATCACTTGCTTATACACTTATTTTTCTCCATCGAGGAAGGTTGCCATGGCAGGGGTATCAGGGTGATAACAAATCTTTCCTAGTTTGTAAAAAGAAGATGGCAACATCACCTGAAATGCTGTGCTGTTTCTGCCCCGCAGCTCTAAGGCAATTTCTTGAGATCGTGGTGAACATGAAATTTGATGAAGAGCCTAACTATTCAAAATTAATATCACTGTTTGAGGGATTGATAGGAACAAATCCTGCTGTAAGACCATTAAAAATTGATGGTGCTCAGAAGATTATTAGCCAGGTTGGCCAGAAACGGGGTAGATTGAATATTGAGGAAGATGATGACGGGCAGCCAAGGAAGAAGGTTCGGCTAGGAGTACCCGCTACACAATGGATTTCAATTTACAATGCTCGGATGCCAATGAAACAAAGGTATCATTACAACGTCGCTGATGCAAGGTTGGCACAACATGTGGAGAGAGGAATTGCAGATGGTCTGCTTATAAGTTGCGTGTCTTCGTGTTCTAATCTCTGGGCACTTATTATGGATGCTGGAACTGGTTTTTCAAACCAAGTTTATGAGCTTTCTCCCTTCTTCTTGCACAAGGAATGGATAATGGAACAATGGGAAAAGAATTATTACATTAGTTCTATTGCTGGTGCTAACAATGGGAGTTCCCTTGTGGTGATGTCCAAAGGAACCCAGTATACTCAACAGTCTTACAAAGTGAGCGATTCTTTCCCCTTCAAGTGGATAAACAAAAAGTGGAGGGAAGGTTTTCATGTAACTTCAATGGCAACTGCTGGGAGCCGGTGGGGTGTTGTAATGTCTCGGAATGCTGGCTTCAGTGATCAGGTTGTGGAGCTTGATTTTCTCTATCCAAGTGAAGGCATCCACAGGCGTTGGGATAATGGTTTCCGGATAACATCAACAGCTGCAACCTGGGATCAAGCGGCTCTTATCTTGAGTGTTCCCAAGCGCAAACCTGGTGATGAAACACAGGAGACCCTGCGTACATCACAATTTCCTAGCACACATGTCAAGGAAAAATGGGCAAAGAATCTGTATCTTGCTTGTTTGTGCTATGGACGTACCGTATCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04011 ko04392 map04011 map04392
Pfam Domains
Protein Families
Pkinase

Protein Analysis

717

Amino Acids

80.67

Weight (kDa)

6.79

Isoelectric Point (pI)

54.63

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 151 - 386 2.4e-17 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 152 - 423 5.2e-07 Protein tyrosine and serine/threonine kinase
Pkinase_fungal PF17667 264 - 361 4.8e-07 Fungal protein kinase
DUF7477 PF24289 450 - 717 1.8e-162 Domain of unknown function (DUF7477)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0011667)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G13670
fragaria_vesca FvH4_3g44690
malus_domestica MD03G1011500.v1.1 MD11G1014200.v1.1
prunus_persica Prupe.6G011900_v2.0.a1 Prupe.6G011900_v2.0.a1 Prupe.6G011900_v2.0.a1
pyrus_communis pycom03g01040 pycom11g00960
rosa_chinensis RchiOBHm_Chr5g0081361
rosa_laevigata RLG00000036927
rosa_multiflora Rmu_sc0007768.1_g000010 Rmu_sc0009187.1_g000017
rosa_roxburghii Rroxscaffold_1G00002180
rosa_rugosa Rorug05G0476000
rosa_samantha Rh5AG527400 Rh5BG551600 Rh5CG574400
rosa_wichuraiana Rw5G049050

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 669, 1553
Acc36I ACCTGC 1 cut(s) 106
AccB1I GGYRCC 1 cut(s) 409
AccBSI CCGCTC 1 cut(s) 884
AccI GTMKAC 2 cut(s) 1042, 1757
AccII CGCG 3 cut(s) 97, 110, 219
AccIII TCCGGA 1 cut(s) 1968
AclWI GGATC 2 cut(s) 448, 2004
AcoI YGGCCR 1 cut(s) 1354
AcsI RAATTY 2 cut(s) 566, 1235
AcuI CTGAAG 3 cut(s) 188, 729, 1879
AcyI GRCGYC 1 cut(s) 410
AfaI GTAC 5 cut(s) 406, 663, 1428, 2065, 2143
AfiI CCNNNNNNNGG 4 cut(s) 1109, 1363, 1800, 1937
AflIII ACRYGT 3 cut(s) 95, 1519, 2086
AgsI TTSAA 8 cut(s) 431, 962, 1260, 1375, 1449, 1617, 1798, 1842
AjnI CCWGG 4 cut(s) 541, 1347, 1991, 2035
AjuI GAANNNNNNNTTGG 2 cut(s) 453, 485
AloI GAACNNNNNNTCC 2 cut(s) 523, 555
Alw21I GWGCWC 2 cut(s) 576, 1333
Alw26I GTCTC 3 cut(s) 90, 1884, 2048
AlwI GGATC 2 cut(s) 448, 2004
Aor13HI TCCGGA 1 cut(s) 1968
AoxI GGCC 2 cut(s) 137, 1354
ApeKI GCWGC 7 cut(s) 184, 380, 591, 594, 1196, 1399, 1985
ApoI RAATTY 2 cut(s) 566, 1235
ArsI GACNNNNNNTTYG 2 cut(s) 523, 555
AseI ATTAAT 1 cut(s) 1265
Asp700I GAANNNNTTC 2 cut(s) 426, 1827
AspLEI GCGC 2 cut(s) 412, 2031
AspS9I GGNCC 5 cut(s) 61, 214, 539, 602, 716
AsuHPI GGTGA 6 cut(s) 272, 1133, 1158, 1237, 1747, 2051
AsuII TTCGAA 1 cut(s) 13
AvaII GGWCC 5 cut(s) 61, 214, 539, 602, 716
BaeGI GKGCMC 1 cut(s) 1588
BaeI ACNNNNGTAYC 2 cut(s) 1466, 1499
BalI TGGCCA 1 cut(s) 1356
BanI GGYRCC 1 cut(s) 409
BbsI GAAGAC 2 cut(s) 249, 1557
Bbv12I GWGCWC 2 cut(s) 576, 1333
BbvCI CCTCAGC 1 cut(s) 123
BbvI GCAGC 7 cut(s) 171, 367, 578, 606, 1208, 1411, 1972
BccI CCATC 6 cut(s) 337, 883, 1095, 1150, 1319, 1535
BceAI ACGGC 3 cut(s) 40, 397, 423
BcgI CGANNNNNNTGC 2 cut(s) 1046, 1080
BciT130I CCWGG 4 cut(s) 543, 1349, 1993, 2037
BclI TGATCA 2 cut(s) 967, 1900
BcoDI GTCTC 3 cut(s) 90, 1884, 2048
BfaI CTAG 9 cut(s) 39, 713, 720, 822, 1008, 1038, 1139, 1421, 2079
BfmI CTRYAG 2 cut(s) 592, 762
BfoI RGCGCY 1 cut(s) 413
BfuAI ACCTGC 1 cut(s) 106
BglI GCCNNNNNGGC 1 cut(s) 1353
Bme1390I CCNGG 4 cut(s) 543, 1349, 1993, 2037
Bme18I GGWCC 5 cut(s) 61, 214, 539, 602, 716
BmgT120I GGNCC 5 cut(s) 61, 214, 539, 602, 716
BmiI GGNNCC 5 cut(s) 63, 192, 411, 1750, 1859
BmrFI CCNGG 4 cut(s) 543, 1349, 1993, 2037
BmrI ACTGGG 1 cut(s) 1747
BmsI GCATC 5 cut(s) 804, 1455, 1492, 1588, 1950
BmuI ACTGGG 1 cut(s) 1747
BpiI GAAGAC 2 cut(s) 249, 1557
BplI GAGNNNNNCTC 2 cut(s) 1038, 1070
BpmI CTGGAG 1 cut(s) 827
Bpu10I CCTNAGC 1 cut(s) 123
Bpu14I TTCGAA 1 cut(s) 13
BpuEI CTTGAG 5 cut(s) 385, 870, 928, 1235, 2035
Bsa29I ATCGAT 1 cut(s) 800
BsaHI GRCGYC 1 cut(s) 410
BsaI GGTCTC 1 cut(s) 2048
BsaJI CCNNGG 7 cut(s) 28, 102, 140, 913, 1103, 1403, 1992
BsaWI WCCGGW 1 cut(s) 1968
BsaXI ACNNNNNCTCC 2 cut(s) 1810, 1840
Bsc4I CCNNNNNNNGG 4 cut(s) 1109, 1363, 1800, 1937
Bse118I RCCGGY 1 cut(s) 1860
Bse1I ACTGG 2 cut(s) 1612, 1753
BseAI TCCGGA 1 cut(s) 1968
BseBI CCWGG 4 cut(s) 543, 1349, 1993, 2037
BseCI ATCGAT 1 cut(s) 800
BseDI CCNNGG 7 cut(s) 28, 102, 140, 913, 1103, 1403, 1992
BseGI GGATG 4 cut(s) 736, 1470, 1603, 1941
BseLI CCNNNNNNNGG 4 cut(s) 1109, 1363, 1800, 1937
BseMII CTCAG 2 cut(s) 114, 1346
BseNI ACTGG 2 cut(s) 1612, 1753
BseRI GAGGAG 9 cut(s) 188, 191, 305, 308, 311, 314, 317, 320, 323
BseSI GKGCMC 1 cut(s) 1588
BseXI GCAGC 7 cut(s) 171, 367, 578, 606, 1208, 1411, 1972
BseYI CCCAGC 2 cut(s) 383, 1853
Bsh1236I CGCG 3 cut(s) 97, 110, 219
Bsh1285I CGRYCG 1 cut(s) 108
BshFI GGCC 2 cut(s) 139, 1356
BshNI GGYRCC 1 cut(s) 409
BshVI ATCGAT 1 cut(s) 800
BsiEI CGRYCG 1 cut(s) 108
BsiHKAI GWGCWC 2 cut(s) 576, 1333
BsiSI CCGG 5 cut(s) 5, 188, 194, 1861, 1969
BslFI GGGAC 1 cut(s) 698
BslI CCNNNNNNNGG 4 cut(s) 1109, 1363, 1800, 1937
BsmAI GTCTC 3 cut(s) 90, 1884, 2048
BsmBI CGTCTC 1 cut(s) 90
BsmFI GGGAC 1 cut(s) 698
BsmI GAATGC 1 cut(s) 1891
BsnI GGCC 2 cut(s) 139, 1356
Bso31I GGTCTC 1 cut(s) 2048
Bsp119I TTCGAA 1 cut(s) 13
Bsp1286I GDGCHC 3 cut(s) 576, 1333, 1588
Bsp13I TCCGGA 1 cut(s) 1968
Bsp143I GATC 5 cut(s) 440, 967, 1218, 1900, 1996
Bsp19I CCATGG 1 cut(s) 1103
Bsp68I TCGCGA 1 cut(s) 110
BspANI GGCC 2 cut(s) 139, 1356
BspCNI CTCAG 2 cut(s) 115, 1345
BspDI ATCGAT 1 cut(s) 800
BspEI TCCGGA 1 cut(s) 1968
BspFNI CGCG 3 cut(s) 97, 110, 219
BspLI GGNNCC 5 cut(s) 63, 192, 411, 1750, 1859
BspMAI CTGCAG 2 cut(s) 596, 766
BspMI ACCTGC 1 cut(s) 106
BspPI GGATC 2 cut(s) 448, 2004
BspQI GCTCTTC 1 cut(s) 1239
BspT104I TTCGAA 1 cut(s) 13
BspT107I GGYRCC 1 cut(s) 409
BspTNI GGTCTC 1 cut(s) 2048
BsrBI CCGCTC 1 cut(s) 884
BsrFI RCCGGY 1 cut(s) 1860
BsrI ACTGG 2 cut(s) 1612, 1753
BssAI RCCGGY 1 cut(s) 1860
BssECI CCNNGG 7 cut(s) 28, 102, 140, 913, 1103, 1403, 1992
BssMI GATC 5 cut(s) 440, 967, 1218, 1900, 1996
BssNAI GTATAC 1 cut(s) 1758
BssNI GRCGYC 1 cut(s) 410
BssT1I CCWWGG 2 cut(s) 1103, 1403
Bst1107I GTATAC 1 cut(s) 1758
Bst2UI CCWGG 4 cut(s) 543, 1349, 1993, 2037
Bst4CI ACNGT 5 cut(s) 106, 997, 1275, 1767, 2146
Bst6I CTCTTC 4 cut(s) 282, 321, 390, 1239
BstACI GRCGYC 1 cut(s) 410
BstBI TTCGAA 1 cut(s) 13
BstC8I GCNNGC 3 cut(s) 99, 753, 1891
BstDEI CTNAG 3 cut(s) 123, 1202, 1332
BstDSI CCRYGG 2 cut(s) 102, 1103
BstF5I GGATG 4 cut(s) 736, 1470, 1603, 1941
BstFNI CGCG 3 cut(s) 97, 110, 219
BstH2I RGCGCY 1 cut(s) 413
BstHHI GCGC 2 cut(s) 412, 2031
BstKTI GATC 5 cut(s) 443, 970, 1221, 1903, 1999
BstMAI GTCTC 3 cut(s) 90, 1884, 2048
BstMBI GATC 5 cut(s) 440, 967, 1218, 1900, 1996
BstMCI CGRYCG 1 cut(s) 108
BstNI CCWGG 4 cut(s) 543, 1349, 1993, 2037
BstNSI RCATGY 3 cut(s) 712, 1523, 2090
BstSCI CCNGG 4 cut(s) 541, 1347, 1991, 2035
BstSFI CTRYAG 2 cut(s) 592, 762
BstSLI GKGCMC 1 cut(s) 1588
BstUI CGCG 3 cut(s) 97, 110, 219
BstV1I GCAGC 7 cut(s) 171, 367, 578, 606, 1208, 1411, 1972
BstV2I GAAGAC 2 cut(s) 249, 1557
BstXI CCANNNNNNTGG 1 cut(s) 615
BstZ17I GTATAC 1 cut(s) 1758
Bsu15I ATCGAT 1 cut(s) 800
BsuRI GGCC 2 cut(s) 139, 1356
BsuTUI ATCGAT 1 cut(s) 800
BtgI CCRYGG 2 cut(s) 102, 1103
BtgZI GCGATG 1 cut(s) 770
BtsCI GGATG 4 cut(s) 736, 1470, 1603, 1941
BtsIMutI CAGTG 3 cut(s) 560, 1271, 1903
BtuMI TCGCGA 1 cut(s) 110
BveI ACCTGC 1 cut(s) 106
Cac8I GCNNGC 3 cut(s) 99, 753, 1891
CfoI GCGC 2 cut(s) 412, 2031
Cfr10I RCCGGY 1 cut(s) 1860
Cfr13I GGNCC 5 cut(s) 61, 214, 539, 602, 716
ClaI ATCGAT 1 cut(s) 800
CseI GACGC 1 cut(s) 103
CsiI ACCWGGT 1 cut(s) 2035
Csp6I GTAC 5 cut(s) 405, 662, 1427, 2064, 2142
CspCI CAANNNNNGTGG 2 cut(s) 1934, 1969
CviQI GTAC 5 cut(s) 405, 662, 1427, 2064, 2142
DdeI CTNAG 3 cut(s) 123, 1202, 1332
DinI GGCGCC 1 cut(s) 411
DpnI GATC 5 cut(s) 442, 969, 1220, 1902, 1998
DpnII GATC 5 cut(s) 440, 967, 1218, 1900, 1996
EaeI YGGCCR 1 cut(s) 1354
Eam1104I CTCTTC 4 cut(s) 282, 321, 390, 1239
EarI CTCTTC 4 cut(s) 282, 321, 390, 1239
EciI GGCGGA 1 cut(s) 14
Eco130I CCWWGG 2 cut(s) 1103, 1403
Eco31I GGTCTC 1 cut(s) 2048
Eco47I GGWCC 5 cut(s) 61, 214, 539, 602, 716
Eco57I CTGAAG 3 cut(s) 188, 729, 1879
EcoO109I RGGNCCY 1 cut(s) 716
EcoRII CCWGG 4 cut(s) 541, 1347, 1991, 2035
EcoT14I CCWWGG 2 cut(s) 1103, 1403
EgeI GGCGCC 1 cut(s) 411
EheI GGCGCC 1 cut(s) 411
ErhI CCWWGG 2 cut(s) 1103, 1403
Esp3I CGTCTC 1 cut(s) 90
FalI AAGNNNNNCTT 2 cut(s) 1992, 2024
FaqI GGGAC 1 cut(s) 698
FauI CCCGC 3 cut(s) 75, 1201, 1438
FauNDI CATATG 1 cut(s) 610
FbaI TGATCA 2 cut(s) 967, 1900
FblI GTMKAC 2 cut(s) 1042, 1757
FokI GGATG 4 cut(s) 743, 1477, 1610, 1928
FspBI CTAG 9 cut(s) 39, 713, 720, 822, 1008, 1038, 1139, 1421, 2079
GlaI GCGC 2 cut(s) 411, 2030
GsaI CCCAGC 2 cut(s) 387, 1857
GsuI CTGGAG 1 cut(s) 827
HaeII RGCGCY 1 cut(s) 413
HaeIII GGCC 2 cut(s) 139, 1356
HapII CCGG 5 cut(s) 5, 188, 194, 1861, 1969
HgaI GACGC 1 cut(s) 103
HhaI GCGC 2 cut(s) 412, 2031
Hin1I GRCGYC 1 cut(s) 410
Hin6I GCGC 2 cut(s) 410, 2029
HinP1I GCGC 2 cut(s) 410, 2029
HincII GTYRAC 2 cut(s) 526, 910
HindII GTYRAC 2 cut(s) 526, 910
HindIII AAGCTT 1 cut(s) 467
HinfI GANTC 7 cut(s) 245, 251, 791, 802, 1058, 1784, 2110
HpaII CCGG 5 cut(s) 5, 188, 194, 1861, 1969
HphI GGTGA 6 cut(s) 272, 1133, 1158, 1237, 1747, 2051
Hpy166II GTNNAC 6 cut(s) 526, 625, 910, 1043, 1228, 1758
Hpy188I TCNGA 8 cut(s) 61, 235, 250, 256, 917, 1335, 1464, 1884
Hpy8I GTNNAC 6 cut(s) 526, 625, 910, 1043, 1228, 1758
Hpy99I CGWCG 3 cut(s) 61, 510, 1499
HpyCH4III ACNGT 5 cut(s) 106, 997, 1275, 1767, 2146
HpyCH4IV ACGT 3 cut(s) 973, 1494, 2140
HpyCH4V TGCA 8 cut(s) 594, 764, 817, 835, 1505, 1538, 1651, 1988
HpyF3I CTNAG 3 cut(s) 123, 1202, 1332
HpySE526I ACGT 3 cut(s) 973, 1494, 2140
Hsp92I GRCGYC 1 cut(s) 410
HspAI GCGC 2 cut(s) 410, 2029
KasI GGCGCC 1 cut(s) 409
Kpn2I TCCGGA 1 cut(s) 1968
Ksp22I TGATCA 2 cut(s) 967, 1900
Kzo9I GATC 5 cut(s) 440, 967, 1218, 1900, 1996
LguI GCTCTTC 1 cut(s) 1239
LmnI GCTCC 4 cut(s) 7, 190, 1857, 1912
Lsp1109I GCAGC 7 cut(s) 171, 367, 578, 606, 1208, 1411, 1972
LweI GCATC 5 cut(s) 804, 1455, 1492, 1588, 1950
MabI ACCWGGT 1 cut(s) 2035
MaeI CTAG 9 cut(s) 39, 713, 720, 822, 1008, 1038, 1139, 1421, 2079
MaeII ACGT 3 cut(s) 973, 1494, 2140
MaeIII GTNAC 2 cut(s) 511, 1834
MalI GATC 5 cut(s) 442, 969, 1220, 1902, 1998
MbiI CCGCTC 1 cut(s) 884
MboI GATC 5 cut(s) 440, 967, 1218, 1900, 1996
MhlI GDGCHC 3 cut(s) 576, 1333, 1588
MlsI TGGCCA 1 cut(s) 1356
MluI ACGCGT 1 cut(s) 95
MluNI TGGCCA 1 cut(s) 1356
Mly113I GGCGCC 1 cut(s) 410
MlyI GAGTC 2 cut(s) 239, 800
MmeI TCCRAC 1 cut(s) 39
Mox20I TGGCCA 1 cut(s) 1356
MroI TCCGGA 1 cut(s) 1968
MroXI GAANNNNTTC 2 cut(s) 426, 1827
MscI TGGCCA 1 cut(s) 1356
MseI TTAA 3 cut(s) 1265, 1316, 2152
MslI CAYNNNNRTG 2 cut(s) 613, 840
Msp20I TGGCCA 1 cut(s) 1356
MspA1I CMGCKG 1 cut(s) 1985
MspI CCGG 5 cut(s) 5, 188, 194, 1861, 1969
MspR9I CCNGG 4 cut(s) 543, 1349, 1993, 2037
Mva1269I GAATGC 1 cut(s) 1891
MvaI CCWGG 4 cut(s) 543, 1349, 1993, 2037
MvnI CGCG 3 cut(s) 97, 110, 219
NarI GGCGCC 1 cut(s) 410
NcoI CCATGG 1 cut(s) 1103
NdeI CATATG 1 cut(s) 610
NdeII GATC 5 cut(s) 440, 967, 1218, 1900, 1996
NlaIV GGNNCC 5 cut(s) 63, 192, 411, 1750, 1859
NmeAIII GCCGAG 2 cut(s) 53, 165
NruI TCGCGA 1 cut(s) 110
NspI RCATGY 3 cut(s) 712, 1523, 2090
NspV TTCGAA 1 cut(s) 13
PciI ACATGT 2 cut(s) 1519, 2086
PciSI GCTCTTC 1 cut(s) 1239
PcsI WCGNNNNNNNCGW 1 cut(s) 94
PctI GAATGC 1 cut(s) 1891
PdmI GAANNNNTTC 2 cut(s) 426, 1827
PfeI GAWTC 5 cut(s) 251, 802, 1058, 1784, 2110
PleI GAGTC 2 cut(s) 239, 799
PluTI GGCGCC 1 cut(s) 413
PpsI GAGTC 2 cut(s) 239, 799
PpuMI RGGWCCY 1 cut(s) 716
PscI ACATGT 2 cut(s) 1519, 2086
PshBI ATTAAT 1 cut(s) 1265
PsiI TTATAA 2 cut(s) 669, 1553
Psp5II RGGWCCY 1 cut(s) 716
Psp6I CCWGG 4 cut(s) 541, 1347, 1991, 2035
PspFI CCCAGC 2 cut(s) 383, 1853
PspGI CCWGG 4 cut(s) 541, 1347, 1991, 2035
PspN4I GGNNCC 5 cut(s) 63, 192, 411, 1750, 1859
PspPI GGNCC 5 cut(s) 61, 214, 539, 602, 716
PspPPI RGGWCCY 1 cut(s) 716
PsrI GAACNNNNNNTAC 2 cut(s) 1741, 1773
PstI CTGCAG 2 cut(s) 596, 766
PvuII CAGCTG 1 cut(s) 1985
RruI TCGCGA 1 cut(s) 110
RsaI GTAC 5 cut(s) 406, 663, 1428, 2065, 2143
RsaNI GTAC 5 cut(s) 405, 662, 1427, 2064, 2142
RseI CAYNNNNRTG 2 cut(s) 613, 840
SapI GCTCTTC 1 cut(s) 1239
SaqAI TTAA 3 cut(s) 1265, 1316, 2152
Sau3AI GATC 5 cut(s) 440, 967, 1218, 1900, 1996
Sau96I GGNCC 5 cut(s) 61, 214, 539, 602, 716
SchI GAGTC 2 cut(s) 239, 800
ScrFI CCNGG 4 cut(s) 543, 1349, 1993, 2037
SduI GDGCHC 3 cut(s) 576, 1333, 1588
SexAI ACCWGGT 1 cut(s) 2035
SfaNI GCATC 5 cut(s) 804, 1455, 1492, 1588, 1950
SfcI CTRYAG 2 cut(s) 592, 762
SfoI GGCGCC 1 cut(s) 411
SfuI TTCGAA 1 cut(s) 13
SinI GGWCC 5 cut(s) 61, 214, 539, 602, 716
SmiMI CAYNNNNRTG 2 cut(s) 613, 840
SmlI CTYRAG 5 cut(s) 364, 885, 943, 1214, 2014
SmoI CTYRAG 5 cut(s) 364, 885, 943, 1214, 2014
SspDI GGCGCC 1 cut(s) 409
SspI AATATT 1 cut(s) 1378
SspMI CTAG 9 cut(s) 39, 713, 720, 822, 1008, 1038, 1139, 1421, 2079
StyD4I CCNGG 4 cut(s) 541, 1347, 1991, 2035
StyI CCWWGG 2 cut(s) 1103, 1403
TaaI ACNGT 5 cut(s) 106, 997, 1275, 1767, 2146
TaiI ACGT 3 cut(s) 976, 1497, 2143
TaqI TCGA 8 cut(s) 13, 88, 552, 570, 800, 1000, 1056, 1090
TaqII GACCGA 1 cut(s) 543
TatI WGTACW 1 cut(s) 661
TauI GCSGC 5 cut(s) 73, 76, 79, 448, 2006
TfiI GAWTC 5 cut(s) 251, 802, 1058, 1784, 2110
Tru1I TTAA 3 cut(s) 1265, 1316, 2152
Tru9I TTAA 3 cut(s) 1265, 1316, 2152
TscAI CASTG 3 cut(s) 567, 1278, 1903
TseI GCWGC 7 cut(s) 184, 380, 591, 594, 1196, 1399, 1985
TspDTI ATGAA 7 cut(s) 944, 1004, 1247, 1257, 1487, 1820, 2058
TspGWI ACGGA 1 cut(s) 72
TspRI CASTG 3 cut(s) 567, 1278, 1903
VpaK11BI GGWCC 5 cut(s) 61, 214, 539, 602, 716
VspI ATTAAT 1 cut(s) 1265
XapI RAATTY 2 cut(s) 566, 1235
XbaI TCTAGA 1 cut(s) 821
XceI RCATGY 3 cut(s) 712, 1523, 2090
XmiI GTMKAC 2 cut(s) 1042, 1757
XmnI GAANNNNTTC 2 cut(s) 426, 1827
XspI CTAG 9 cut(s) 39, 713, 720, 822, 1008, 1038, 1139, 1421, 2079
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.