starch synthase
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_4g00200 FvH4_4g00200 FvH4_4g00200 FvH4_4g00200 FvH4_4g00200 |
| malus_domestica | MD13G1285500.v1.1 |
| prunus_persica | Prupe.6G144700_v2.0.a1 Prupe.6G144700_v2.0.a1 Prupe.6G144700_v2.0.a1 |
| pyrus_communis | pycom420g00570 |
| rosa_chinensis | RchiOBHm_Chr4g0384801 |
| rosa_laevigata | RLG00000010268 |
| rosa_multiflora | Rmu_sc0003822.1_g000027 |
| rosa_roxburghii | Rroxscaffold_5G00332870 |
| rosa_rugosa | Rorug03G0297900 Rorug03G0298000 |
| rosa_samantha | Rh4AG001600 Rh4BG001400 Rh4CG001300 Rh4DG001400 |
| rosa_wichuraiana | Rw0G012850 Rw4G000750 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 649 |
| Acc36I | ACCTGC | 2 cut(s) | 649, 694 |
| AccB1I | GGYRCC | 1 cut(s) | 325 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 790, 1501 |
| AccI | GTMKAC | 2 cut(s) | 811, 936 |
| AccII | CGCG | 1 cut(s) | 393 |
| AciI | CCGC | 1 cut(s) | 393 |
| AclWI | GGATC | 5 cut(s) | 496, 509, 840, 853, 1248 |
| AcoI | YGGCCR | 2 cut(s) | 194, 394 |
| AcsI | RAATTY | 5 cut(s) | 101, 160, 1102, 1259, 1546 |
| AdeI | CACNNNGTG | 1 cut(s) | 403 |
| AfaI | GTAC | 3 cut(s) | 1009, 1034, 1661 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 244, 790, 1302, 1501 |
| AflII | CTTAAG | 1 cut(s) | 755 |
| AflIII | ACRYGT | 1 cut(s) | 735 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1452 |
| AjiI | CACGTC | 1 cut(s) | 132 |
| AleI | CACNNNNGTG | 1 cut(s) | 801 |
| AluBI | AGCT | 8 cut(s) | 79, 116, 317, 613, 915, 1330, 1538, 1638 |
| AluI | AGCT | 8 cut(s) | 79, 116, 317, 613, 915, 1330, 1538, 1638 |
| Alw21I | GWGCWC | 2 cut(s) | 798, 1332 |
| Alw26I | GTCTC | 2 cut(s) | 974, 1187 |
| AlwI | GGATC | 5 cut(s) | 496, 509, 840, 853, 1248 |
| Ama87I | CYCGRG | 1 cut(s) | 375 |
| AoxI | GGCC | 4 cut(s) | 194, 394, 618, 1398 |
| ApeKI | GCWGC | 3 cut(s) | 1349, 1352, 1685 |
| ApoI | RAATTY | 5 cut(s) | 101, 160, 1102, 1259, 1546 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 877, 909, 1550, 1582 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 233 |
| AspS9I | GGNCC | 2 cut(s) | 1292, 1399 |
| AsuC2I | CCSGG | 1 cut(s) | 1247 |
| AsuHPI | GGTGA | 5 cut(s) | 365, 673, 815, 1235, 1630 |
| AvaI | CYCGRG | 1 cut(s) | 375 |
| AvaII | GGWCC | 1 cut(s) | 1292 |
| AxyI | CCTNAGG | 1 cut(s) | 1174 |
| BalI | TGGCCA | 1 cut(s) | 196 |
| BamHI | GGATCC | 2 cut(s) | 501, 845 |
| BanI | GGYRCC | 1 cut(s) | 325 |
| BanII | GRGCYC | 1 cut(s) | 1332 |
| BbsI | GAAGAC | 1 cut(s) | 1272 |
| Bbv12I | GWGCWC | 2 cut(s) | 798, 1332 |
| BbvI | GCAGC | 2 cut(s) | 1336, 1339 |
| BccI | CCATC | 9 cut(s) | 10, 132, 205, 485, 568, 836, 990, 1495, 1621 |
| BceAI | ACGGC | 1 cut(s) | 1665 |
| BciVI | GTATCC | 1 cut(s) | 443 |
| BclI | TGATCA | 1 cut(s) | 1483 |
| BcnI | CCSGG | 1 cut(s) | 1247 |
| BcoDI | GTCTC | 2 cut(s) | 974, 1187 |
| BfaI | CTAG | 1 cut(s) | 1367 |
| BfmI | CTRYAG | 2 cut(s) | 937, 1576 |
| BfrI | CTTAAG | 1 cut(s) | 755 |
| BfuAI | ACCTGC | 2 cut(s) | 649, 694 |
| BfuI | GTATCC | 1 cut(s) | 443 |
| BisI | GCNGC | 4 cut(s) | 394, 1350, 1353, 1686 |
| BlsI | GCNGC | 4 cut(s) | 395, 1351, 1354, 1687 |
| BmcAI | AGTACT | 2 cut(s) | 1009, 1034 |
| Bme1390I | CCNGG | 1 cut(s) | 1247 |
| Bme18I | GGWCC | 1 cut(s) | 1292 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1452 |
| BmeT110I | CYCGRG | 1 cut(s) | 375 |
| BmgBI | CACGTC | 1 cut(s) | 132 |
| BmgT120I | GGNCC | 2 cut(s) | 1292, 1399 |
| BmiI | GGNNCC | 6 cut(s) | 12, 327, 503, 847, 1073, 1294 |
| BmrFI | CCNGG | 1 cut(s) | 1247 |
| BmrI | ACTGGG | 2 cut(s) | 536, 1235 |
| BmsI | GCATC | 3 cut(s) | 153, 451, 645 |
| BmuI | ACTGGG | 2 cut(s) | 536, 1235 |
| BpiI | GAAGAC | 1 cut(s) | 1272 |
| BpmI | CTGGAG | 1 cut(s) | 635 |
| BpuEI | CTTGAG | 2 cut(s) | 959, 1187 |
| BpuMI | CCSGG | 1 cut(s) | 1247 |
| BsaJI | CCNNGG | 4 cut(s) | 68, 279, 1236, 1288 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 946, 976 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 244, 790, 1302, 1501 |
| Bse1I | ACTGG | 7 cut(s) | 370, 503, 542, 1230, 1401, 1433, 1453 |
| Bse21I | CCTNAGG | 1 cut(s) | 1174 |
| Bse3DI | GCAATG | 1 cut(s) | 949 |
| BseDI | CCNNGG | 4 cut(s) | 68, 279, 1236, 1288 |
| BseGI | GGATG | 4 cut(s) | 253, 560, 660, 1001 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 244, 790, 1302, 1501 |
| BseMI | GCAATG | 1 cut(s) | 949 |
| BseMII | CTCAG | 2 cut(s) | 1113, 1188 |
| BseNI | ACTGG | 7 cut(s) | 370, 503, 542, 1230, 1401, 1433, 1453 |
| BseRI | GAGGAG | 1 cut(s) | 85 |
| BseXI | GCAGC | 2 cut(s) | 1336, 1339 |
| BseYI | CCCAGC | 1 cut(s) | 1295 |
| Bsh1236I | CGCG | 1 cut(s) | 393 |
| BshFI | GGCC | 4 cut(s) | 196, 396, 620, 1400 |
| BshNI | GGYRCC | 1 cut(s) | 325 |
| BsiHKAI | GWGCWC | 2 cut(s) | 798, 1332 |
| BsiHKCI | CYCGRG | 1 cut(s) | 375 |
| BsiSI | CCGG | 1 cut(s) | 1246 |
| BslFI | GGGAC | 4 cut(s) | 594, 746, 1173, 1278 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 244, 790, 1302, 1501 |
| BsmAI | GTCTC | 2 cut(s) | 974, 1187 |
| BsmFI | GGGAC | 4 cut(s) | 594, 746, 1173, 1278 |
| BsmI | GAATGC | 1 cut(s) | 1299 |
| BsnI | GGCC | 4 cut(s) | 196, 396, 620, 1400 |
| BsoBI | CYCGRG | 1 cut(s) | 375 |
| Bsp1286I | GDGCHC | 2 cut(s) | 798, 1332 |
| Bsp143I | GATC | 6 cut(s) | 447, 501, 845, 880, 1240, 1483 |
| BspACI | CCGC | 1 cut(s) | 393 |
| BspANI | GGCC | 4 cut(s) | 196, 396, 620, 1400 |
| BspCNI | CTCAG | 2 cut(s) | 1114, 1187 |
| BspFNI | CGCG | 1 cut(s) | 393 |
| BspHI | TCATGA | 3 cut(s) | 487, 1024, 1691 |
| BspLI | GGNNCC | 6 cut(s) | 12, 327, 503, 847, 1073, 1294 |
| BspMI | ACCTGC | 2 cut(s) | 649, 694 |
| BspPI | GGATC | 5 cut(s) | 496, 509, 840, 853, 1248 |
| BspQI | GCTCTTC | 1 cut(s) | 1320 |
| BspT107I | GGYRCC | 1 cut(s) | 325 |
| BspTI | CTTAAG | 1 cut(s) | 755 |
| BsrDI | GCAATG | 1 cut(s) | 949 |
| BsrI | ACTGG | 7 cut(s) | 370, 503, 542, 1230, 1401, 1433, 1453 |
| BssECI | CCNNGG | 4 cut(s) | 68, 279, 1236, 1288 |
| BssMI | GATC | 6 cut(s) | 447, 501, 845, 880, 1240, 1483 |
| BssT1I | CCWWGG | 2 cut(s) | 279, 1288 |
| Bst4CI | ACNGT | 5 cut(s) | 403, 889, 958, 1468, 1562 |
| Bst6I | CTCTTC | 1 cut(s) | 1320 |
| BstAFI | CTTAAG | 1 cut(s) | 755 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 412 |
| BstC8I | GCNNGC | 4 cut(s) | 643, 1415, 1573, 1654 |
| BstDEI | CTNAG | 4 cut(s) | 824, 1016, 1122, 1174 |
| BstF5I | GGATG | 4 cut(s) | 253, 560, 660, 1001 |
| BstFNI | CGCG | 1 cut(s) | 393 |
| BstKTI | GATC | 6 cut(s) | 450, 504, 848, 883, 1243, 1486 |
| BstMAI | GTCTC | 2 cut(s) | 974, 1187 |
| BstMBI | GATC | 6 cut(s) | 447, 501, 845, 880, 1240, 1483 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 323, 332, 412 |
| BstNSI | RCATGY | 4 cut(s) | 384, 739, 832, 1417 |
| BstSCI | CCNGG | 1 cut(s) | 1245 |
| BstSFI | CTRYAG | 2 cut(s) | 937, 1576 |
| BstUI | CGCG | 1 cut(s) | 393 |
| BstV1I | GCAGC | 2 cut(s) | 1336, 1339 |
| BstV2I | GAAGAC | 1 cut(s) | 1272 |
| BstX2I | RGATCY | 2 cut(s) | 501, 845 |
| BstXI | CCANNNNNNTGG | 3 cut(s) | 295, 1409, 1596 |
| BstYI | RGATCY | 2 cut(s) | 501, 845 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1174 |
| BsuI | GTATCC | 1 cut(s) | 443 |
| BsuRI | GGCC | 4 cut(s) | 196, 396, 620, 1400 |
| BtgZI | GCGATG | 2 cut(s) | 110, 130 |
| BtrI | CACGTC | 1 cut(s) | 132 |
| BtsCI | GGATG | 4 cut(s) | 253, 560, 660, 1001 |
| BtsIMutI | CAGTG | 1 cut(s) | 408 |
| BveI | ACCTGC | 2 cut(s) | 649, 694 |
| Cac8I | GCNNGC | 4 cut(s) | 643, 1415, 1573, 1654 |
| CciI | TCATGA | 3 cut(s) | 487, 1024, 1691 |
| Cfr13I | GGNCC | 2 cut(s) | 1292, 1399 |
| Csp6I | GTAC | 3 cut(s) | 1008, 1033, 1660 |
| CviQI | GTAC | 3 cut(s) | 1008, 1033, 1660 |
| DdeI | CTNAG | 4 cut(s) | 824, 1016, 1122, 1174 |
| DpnI | GATC | 6 cut(s) | 449, 503, 847, 882, 1242, 1485 |
| DpnII | GATC | 6 cut(s) | 447, 501, 845, 880, 1240, 1483 |
| DraIII | CACNNNGTG | 1 cut(s) | 403 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1452 |
| EaeI | YGGCCR | 2 cut(s) | 194, 394 |
| Eam1104I | CTCTTC | 1 cut(s) | 1320 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1452 |
| EarI | CTCTTC | 1 cut(s) | 1320 |
| Ecl136II | GAGCTC | 1 cut(s) | 1330 |
| Eco130I | CCWWGG | 2 cut(s) | 279, 1288 |
| Eco147I | AGGCCT | 1 cut(s) | 620 |
| Eco24I | GRGCYC | 1 cut(s) | 1332 |
| Eco32I | GATATC | 1 cut(s) | 682 |
| Eco47I | GGWCC | 1 cut(s) | 1292 |
| Eco53kI | GAGCTC | 1 cut(s) | 1330 |
| Eco81I | CCTNAGG | 1 cut(s) | 1174 |
| Eco88I | CYCGRG | 1 cut(s) | 375 |
| EcoICRI | GAGCTC | 1 cut(s) | 1330 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1292 |
| EcoRV | GATATC | 1 cut(s) | 682 |
| EcoT14I | CCWWGG | 2 cut(s) | 279, 1288 |
| EcoT22I | ATGCAT | 1 cut(s) | 517 |
| EcoT38I | GRGCYC | 1 cut(s) | 1332 |
| ErhI | CCWWGG | 2 cut(s) | 279, 1288 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 807, 839 |
| FaqI | GGGAC | 4 cut(s) | 594, 746, 1173, 1278 |
| FbaI | TGATCA | 1 cut(s) | 1483 |
| FblI | GTMKAC | 2 cut(s) | 811, 936 |
| Fnu4HI | GCNGC | 4 cut(s) | 394, 1350, 1353, 1686 |
| FokI | GGATG | 4 cut(s) | 260, 547, 667, 1008 |
| FriOI | GRGCYC | 1 cut(s) | 1332 |
| Fsp4HI | GCNGC | 4 cut(s) | 394, 1350, 1353, 1686 |
| FspBI | CTAG | 1 cut(s) | 1367 |
| GluI | GCNGC | 4 cut(s) | 394, 1350, 1353, 1686 |
| GsaI | CCCAGC | 1 cut(s) | 1299 |
| GsuI | CTGGAG | 1 cut(s) | 635 |
| HaeIII | GGCC | 4 cut(s) | 196, 396, 620, 1400 |
| HapII | CCGG | 1 cut(s) | 1246 |
| HincII | GTYRAC | 2 cut(s) | 253, 777 |
| HindII | GTYRAC | 2 cut(s) | 253, 777 |
| HindIII | AAGCTT | 3 cut(s) | 77, 913, 1536 |
| HinfI | GANTC | 6 cut(s) | 64, 166, 284, 537, 1277, 1676 |
| HpaI | GTTAAC | 1 cut(s) | 777 |
| HpaII | CCGG | 1 cut(s) | 1246 |
| HphI | GGTGA | 5 cut(s) | 365, 673, 815, 1235, 1630 |
| Hpy166II | GTNNAC | 6 cut(s) | 253, 777, 812, 937, 1211, 1394 |
| Hpy188I | TCNGA | 9 cut(s) | 15, 69, 84, 107, 259, 447, 1123, 1240, 1305 |
| Hpy8I | GTNNAC | 6 cut(s) | 253, 777, 812, 937, 1211, 1394 |
| HpyAV | CCTTC | 6 cut(s) | 249, 1086, 1107, 1383, 1517, 1609 |
| HpyCH4III | ACNGT | 5 cut(s) | 403, 889, 958, 1468, 1562 |
| HpyCH4IV | ACGT | 2 cut(s) | 131, 461 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 323, 332, 412 |
| HpyF3I | CTNAG | 4 cut(s) | 824, 1016, 1122, 1174 |
| HpySE526I | ACGT | 2 cut(s) | 131, 461 |
| Ksp22I | TGATCA | 1 cut(s) | 1483 |
| KspAI | GTTAAC | 1 cut(s) | 777 |
| Kzo9I | GATC | 6 cut(s) | 447, 501, 845, 880, 1240, 1483 |
| LguI | GCTCTTC | 1 cut(s) | 1320 |
| LmnI | GCTCC | 1 cut(s) | 793 |
| Lsp1109I | GCAGC | 2 cut(s) | 1336, 1339 |
| LweI | GCATC | 3 cut(s) | 153, 451, 645 |
| MaeI | CTAG | 1 cut(s) | 1367 |
| MaeII | ACGT | 2 cut(s) | 131, 461 |
| MaeIII | GTNAC | 6 cut(s) | 132, 310, 361, 661, 893, 952 |
| MalI | GATC | 6 cut(s) | 449, 503, 847, 882, 1242, 1485 |
| MboI | GATC | 6 cut(s) | 447, 501, 845, 880, 1240, 1483 |
| MboII | GAAGA | 5 cut(s) | 238, 1277, 1337, 1604, 1636 |
| MflI | RGATCY | 2 cut(s) | 501, 845 |
| MhlI | GDGCHC | 2 cut(s) | 798, 1332 |
| MlsI | TGGCCA | 1 cut(s) | 196 |
| MluNI | TGGCCA | 1 cut(s) | 196 |
| MlyI | GAGTC | 1 cut(s) | 160 |
| MmeI | TCCRAC | 2 cut(s) | 227, 989 |
| MnlI | CCTC | 7 cut(s) | 63, 66, 277, 610, 1117, 1183, 1246 |
| Mox20I | TGGCCA | 1 cut(s) | 196 |
| Mph1103I | ATGCAT | 1 cut(s) | 517 |
| MroXI | GAANNNNTTC | 1 cut(s) | 233 |
| MscI | TGGCCA | 1 cut(s) | 196 |
| MseI | TTAA | 8 cut(s) | 464, 576, 756, 776, 911, 1113, 1284, 1611 |
| MslI | CAYNNNNRTG | 3 cut(s) | 693, 801, 1064 |
| Msp20I | TGGCCA | 1 cut(s) | 196 |
| MspA1I | CMGCKG | 1 cut(s) | 317 |
| MspCI | CTTAAG | 1 cut(s) | 755 |
| MspI | CCGG | 1 cut(s) | 1246 |
| MspR9I | CCNGG | 1 cut(s) | 1247 |
| Mva1269I | GAATGC | 1 cut(s) | 1299 |
| MvnI | CGCG | 1 cut(s) | 393 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 323, 332, 412 |
| NciI | CCSGG | 1 cut(s) | 1247 |
| NdeII | GATC | 6 cut(s) | 447, 501, 845, 880, 1240, 1483 |
| NlaIV | GGNNCC | 6 cut(s) | 12, 327, 503, 847, 1073, 1294 |
| NmuCI | GTSAC | 3 cut(s) | 132, 661, 893 |
| NsiI | ATGCAT | 1 cut(s) | 517 |
| NspI | RCATGY | 4 cut(s) | 384, 739, 832, 1417 |
| OliI | CACNNNNGTG | 1 cut(s) | 801 |
| PaeI | GCATGC | 1 cut(s) | 1417 |
| PaeR7I | CTCGAG | 1 cut(s) | 375 |
| PagI | TCATGA | 3 cut(s) | 487, 1024, 1691 |
| PaqCI | CACCTGC | 1 cut(s) | 649 |
| PceI | AGGCCT | 1 cut(s) | 620 |
| PciI | ACATGT | 1 cut(s) | 735 |
| PciSI | GCTCTTC | 1 cut(s) | 1320 |
| PctI | GAATGC | 1 cut(s) | 1299 |
| PdmI | GAANNNNTTC | 1 cut(s) | 233 |
| PfeI | GAWTC | 5 cut(s) | 64, 284, 537, 1277, 1676 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 790, 1501 |
| PkrI | GCNGC | 4 cut(s) | 395, 1351, 1354, 1687 |
| PleI | GAGTC | 1 cut(s) | 160 |
| PpsI | GAGTC | 1 cut(s) | 160 |
| PpuMI | RGGWCCY | 1 cut(s) | 1292 |
| PscI | ACATGT | 1 cut(s) | 735 |
| Psp124BI | GAGCTC | 1 cut(s) | 1332 |
| Psp5II | RGGWCCY | 1 cut(s) | 1292 |
| PspFI | CCCAGC | 1 cut(s) | 1295 |
| PspN4I | GGNNCC | 6 cut(s) | 12, 327, 503, 847, 1073, 1294 |
| PspPI | GGNCC | 2 cut(s) | 1292, 1399 |
| PspPPI | RGGWCCY | 1 cut(s) | 1292 |
| PspXI | VCTCGAGB | 1 cut(s) | 375 |
| PsuI | RGATCY | 2 cut(s) | 501, 845 |
| PvuII | CAGCTG | 1 cut(s) | 317 |
| RsaI | GTAC | 3 cut(s) | 1009, 1034, 1661 |
| RsaNI | GTAC | 3 cut(s) | 1008, 1033, 1660 |
| RseI | CAYNNNNRTG | 3 cut(s) | 693, 801, 1064 |
| SacI | GAGCTC | 1 cut(s) | 1332 |
| SapI | GCTCTTC | 1 cut(s) | 1320 |
| SaqAI | TTAA | 8 cut(s) | 464, 576, 756, 776, 911, 1113, 1284, 1611 |
| SatI | GCNGC | 4 cut(s) | 394, 1350, 1353, 1686 |
| Sau3AI | GATC | 6 cut(s) | 447, 501, 845, 880, 1240, 1483 |
| Sau96I | GGNCC | 2 cut(s) | 1292, 1399 |
| ScaI | AGTACT | 2 cut(s) | 1009, 1034 |
| SchI | GAGTC | 1 cut(s) | 160 |
| ScrFI | CCNGG | 1 cut(s) | 1247 |
| SduI | GDGCHC | 2 cut(s) | 798, 1332 |
| SfaNI | GCATC | 3 cut(s) | 153, 451, 645 |
| SfcI | CTRYAG | 2 cut(s) | 937, 1576 |
| Sfr274I | CTCGAG | 1 cut(s) | 375 |
| SinI | GGWCC | 1 cut(s) | 1292 |
| SlaI | CTCGAG | 1 cut(s) | 375 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 693, 801, 1064 |
| SmlI | CTYRAG | 4 cut(s) | 375, 755, 974, 1202 |
| SmoI | CTYRAG | 4 cut(s) | 375, 755, 974, 1202 |
| SphI | GCATGC | 1 cut(s) | 1417 |
| SseBI | AGGCCT | 1 cut(s) | 620 |
| SsiI | CCGC | 1 cut(s) | 393 |
| SspMI | CTAG | 1 cut(s) | 1367 |
| SstI | GAGCTC | 1 cut(s) | 1332 |
| StuI | AGGCCT | 1 cut(s) | 620 |
| StyD4I | CCNGG | 1 cut(s) | 1245 |
| StyI | CCWWGG | 2 cut(s) | 279, 1288 |
| TaaI | ACNGT | 5 cut(s) | 403, 889, 958, 1468, 1562 |
| TaiI | ACGT | 2 cut(s) | 134, 464 |
| TaqI | TCGA | 2 cut(s) | 376, 883 |
| TatI | WGTACW | 3 cut(s) | 1007, 1032, 1659 |
| TauI | GCSGC | 1 cut(s) | 396 |
| TfiI | GAWTC | 5 cut(s) | 64, 284, 537, 1277, 1676 |
| Tru1I | TTAA | 8 cut(s) | 464, 576, 756, 776, 911, 1113, 1284, 1611 |
| Tru9I | TTAA | 8 cut(s) | 464, 576, 756, 776, 911, 1113, 1284, 1611 |
| TscAI | CASTG | 1 cut(s) | 408 |
| TseFI | GTSAC | 3 cut(s) | 132, 661, 893 |
| TseI | GCWGC | 3 cut(s) | 1349, 1352, 1685 |
| Tsp45I | GTSAC | 3 cut(s) | 132, 661, 893 |
| TspRI | CASTG | 1 cut(s) | 408 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 790, 1501 |
| Vha464I | CTTAAG | 1 cut(s) | 755 |
| VpaK11BI | GGWCC | 1 cut(s) | 1292 |
| XapI | RAATTY | 5 cut(s) | 101, 160, 1102, 1259, 1546 |
| XceI | RCATGY | 4 cut(s) | 384, 739, 832, 1417 |
| XhoI | CTCGAG | 1 cut(s) | 375 |
| XmiI | GTMKAC | 2 cut(s) | 811, 936 |
| XmnI | GAANNNNTTC | 1 cut(s) | 233 |
| XspI | CTAG | 1 cut(s) | 1367 |
| ZrmI | AGTACT | 2 cut(s) | 1009, 1034 |
| Zsp2I | ATGCAT | 1 cut(s) | 517 |