FvH4_4g00300

RING-like zinc finger

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
OG0003873
Physical Location & Seq
Forward (+)
293342 .. 300077
6736 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_4g00300.t3

Sequence Viewer

Length: 2364 bp
ATGGAGGACATGGACATCGATCACATGGTCATACCTGACACGCCCCCACCTGAAAGATATGCTGCCAGACATGGTGTTTCCAGGGAACCTGCCAGTAAAGTCTTTAATTCTCCATTAACTAACAAGTTGAATAATTCAGACTTTGTTGATGAGAAATCACTGAATGGTTCAGGGGTCAAGGATAGATTCATCTATGAGAATGGTCACTGTAAAAGAGTTGTTATTCGTCCTCCGAGAAATCCCATCAATCTTGCAATTCAAAATGGCTCTGCAGAGGCTAATTCATCGGCTTCCGAGAATGCTCACCTCTTTAGGAGACCCGCAGTTGGCAGAAATTCCAGTTGTGAGAACAAACATTCTTCTGGGACCGAAAACTTGGACAGAGGAAAGTCCATAAGAATTAAAGCATTGTCTAAATCTTCTGCATATCCAGAAAACACAGAAGTTCTTGATTTAACTGAACAGAATGGTCAATCCCAGTTGCACCGAAAGGTATTTCCACATGGAAAATTAGATGATGTTGTTCAAGGCACAAGAAACCGGCAGATAATATCAGATGGCAGTTTTACAGATTGCTCTATAAATTATTTGGAGAGATCGAGATATGCCAATAATGCTAAAGAAAAAACAGTTGACAGTACATATACTGGTGTGGGTTTGCCGGTGCCTATGGGGAAAAGGATTGATCTGCCTACTGAGCCTCAACATAAAACAGAGCATCAAAAGCCCATGGCGCTTCATTCTTTTACCCTGCCAAGAGTCAGTGGCCAGAAAAGATTGGTAAGGAATGGTTGTATATCCCCACATAATATAGCAACAAGGTCTAAACAATTAGATGTAGAGAATAATACAAGTTCCAAGAATAATGACCACAGTCATGCTGTTGATGCGGTTTCCAGTGGTCCACCATATGTCATAGATGCAAATGATGTGGTCAATGAAGACAATATAAGGGAAAGAGCGAAAGGGAAAGGGGTAATGGTTCAACCTTCTAGACCAAGAGAGAATAATGCAAGAATTGTTGAAACATCAACCAGTCTTCTGAATGATAATATCGAAGCTAATATAACCAGATATGTTGGCAAAGATATATCTGTATGCTCTGAAGGTGGCTGGAGAAGTACGCGTAATCATTCAAGGACATTAGATCCACTTTTATCTGACTCAGCTGAGCATCTTCCCAGAATAATTAGTGGTGCTGGAAACTTTGTAAATCAACATGGAAGCAGAGTAGGGAGGAAGGATACTTGGAAGGAAGGAAACTTTGTAAATTTTGCAGACGATTTGAATTCAAATCAATCAACAGTTGTATCTGAGCCAGGCCGGATGGCTGGACAACATCGTGAAGGAAAGAGAGTTATTAGAAGGGAGAAGAAACGGGGATTAAGTATGGGAAATCATGGTGAAGGCTCTACATTGGATATTATGGGAAATAATGTTGACTCCGACATTATGTTTCTTGGTTCATCTGATACATCTGAAAGTTCAAAATCATCTAGGATTCACAGACCTCAGTTTCAGGGAATGTTGAGGCCAGTTATTGAAGTTGATGAGTTGTCACCTGCCGCAGGTCCCTCTGACCCCCAAGGTATCAATTCAATGAGTGATGATTCAGAGGCCAAGGCAAGGCAGCTAGAAGCTGATGAGATGTTAGCACGTGAACTGCAGGAACAATTGTATCATGAGATGCCTGCTTTTGGTGGTGGCGAGATTGATGAACATCTAGCTTGGGCACTTCAGCGGGAGGAGAATGCTTTTACTACCTCATCTAGTGGAAGGCATAATATACCTGATAGTAGAGGCTCCACGATATTGCATTCTCATAGACGGCCCCAGTCACAGCCTTCTCAAAATCCTTCAACTAGGAGAGGAGCCCAGGGTCGAGTTCCTAGCTCTTCTGCAGTGGCACAGTTAAGGAATCGCCTTCGCAACCAGGCTCCTAGAGTATCAAATAGAAGAAGGAATCTGCAAGGTCCTTTTCCTTCTGACATGGATCTAGACATGAGACTGAATATACTTGAAGCTTTGGAGACTGCTGTTGGGGATGTCGGAGATGTGGGATTGAATAATCACATGTTTCAACTTCAGCGAGATTTCACCGCCAATGACTATGAGATGTTATTGGCACTTGATGAGAACAATCATCAACTTGGTGGTGCGACAGCTAATCAAATTAATAATTTGCCTCAGTCTACAGTACAGACTGATGCCTCGGAAGAAGCTTGTGCAATCTGTCTTGAAACACCAACACTTGGAGAAACAGTTCGGCATCTTCCTTGCTTGCACAGATTTCACAAAGATTGTATTGATCCGTGGCTCAACAGAAAAACTTCATGCCCAGTCTGCAAATGTTCGATCAGTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
zf-RING_2

Protein Analysis

788

Amino Acids

87.14

Weight (kDa)

6.87

Isoelectric Point (pI)

51.07

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-rbx1 PF12678 738 - 782 1.8e-07 RING-H2 zinc finger domain
zf-RING_2 PF13639 740 - 782 6.1e-12 Ring finger domain
zf-C3HC4_2 PF13923 741 - 781 2.1e-08 Zinc finger, C3HC4 type (RING finger)
zf-RING_11 PF17123 741 - 768 4.1e-08 RING-like zinc finger
zf-C3HC4 PF00097 741 - 781 7.6e-08 Zinc finger, C3HC4 type (RING finger)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1570
Acc36I ACCTGC 3 cut(s) 97, 1559, 1570
AccB1I GGYRCC 1 cut(s) 664
AccB7I CCANNNNNTGG 1 cut(s) 2252
AccI GTMKAC 1 cut(s) 2192
AccII CGCG 1 cut(s) 1126
AciI CCGC 5 cut(s) 321, 890, 1566, 1741, 2100
AclWI GGATC 3 cut(s) 1142, 2001, 2303
AcoI YGGCCR 1 cut(s) 766
AcsI RAATTY 3 cut(s) 334, 1270, 1288
AcuI CTGAAG 3 cut(s) 1125, 1721, 2069
AcvI CACGTG 1 cut(s) 1658
AfaI GTAC 3 cut(s) 640, 1123, 2199
AfiI CCNNNNNNNGG 5 cut(s) 326, 1568, 1626, 1697, 2252
AflIII ACRYGT 2 cut(s) 1124, 2073
AjnI CCWGG 4 cut(s) 80, 1318, 1875, 1932
AloI GAACNNNNNNTCC 2 cut(s) 2247, 2279
AluBI AGCT 9 cut(s) 1061, 1169, 1633, 1640, 1727, 1893, 2024, 2165, 2222
AluI AGCT 9 cut(s) 1061, 1169, 1633, 1640, 1727, 1893, 2024, 2165, 2222
Alw26I GTCTC 3 cut(s) 310, 1999, 2024
AlwI GGATC 3 cut(s) 1142, 2001, 2303
AoxI GGCC 5 cut(s) 766, 1321, 1532, 1617, 1829
ApeKI GCWGC 2 cut(s) 62, 1630
ApoI RAATTY 3 cut(s) 334, 1270, 1288
AseI ATTAAT 1 cut(s) 2175
Asp700I GAANNNNTTC 2 cut(s) 2262, 2329
AspLEI GCGC 1 cut(s) 736
AspS9I GGNCC 5 cut(s) 366, 902, 1571, 1830, 1973
AsuHPI GGTGA 4 cut(s) 296, 1415, 1551, 2089
AvaII GGWCC 4 cut(s) 366, 902, 1571, 1973
BaeGI GKGCMC 1 cut(s) 1735
BaeI ACNNNNGTAYC 4 cut(s) 1293, 1326, 1661, 1694
BalI TGGCCA 1 cut(s) 768
BanI GGYRCC 1 cut(s) 664
BanII GRGCYC 1 cut(s) 1876
BbrPI CACGTG 1 cut(s) 1658
BbsI GAAGAC 2 cut(s) 948, 1031
BbvI GCAGC 2 cut(s) 49, 1642
BccI CCATC 3 cut(s) 251, 551, 1321
BceAI ACGGC 1 cut(s) 1844
BciT130I CCWGG 4 cut(s) 82, 1320, 1877, 1934
BciVI GTATCC 1 cut(s) 1237
BcoDI GTCTC 3 cut(s) 310, 1999, 2024
BfaI CTAG 9 cut(s) 993, 1497, 1634, 1724, 1770, 1863, 1890, 1941, 1997
BfmI CTRYAG 4 cut(s) 270, 1664, 1899, 2193
BfoI RGCGCY 1 cut(s) 737
BfuAI ACCTGC 3 cut(s) 97, 1559, 1570
BfuI GTATCC 1 cut(s) 1237
BisI GCNGC 3 cut(s) 63, 1566, 1631
BlpI GCTNAGC 1 cut(s) 1170
BlsI GCNGC 3 cut(s) 64, 1567, 1632
Bme1390I CCNGG 4 cut(s) 82, 1320, 1877, 1934
Bme18I GGWCC 4 cut(s) 366, 902, 1571, 1973
BmgT120I GGNCC 5 cut(s) 366, 902, 1571, 1830, 1973
BmiI GGNNCC 8 cut(s) 87, 367, 666, 1573, 1804, 1832, 1873, 1938
BmrFI CCNGG 4 cut(s) 82, 1320, 1877, 1934
BmrI ACTGGG 3 cut(s) 472, 1828, 2333
BmsI GCATC 7 cut(s) 727, 877, 910, 1183, 1677, 2197, 2278
BmuI ACTGGG 3 cut(s) 472, 1828, 2333
BoxI GACNNNNGTC 1 cut(s) 873
BpiI GAAGAC 2 cut(s) 948, 1031
BpmI CTGGAG 1 cut(s) 1135
Bpu1102I GCTNAGC 1 cut(s) 1170
Bsa29I ATCGAT 1 cut(s) 18
BsaAI YACGTR 1 cut(s) 1658
BsaBI GATNNNNATC 1 cut(s) 1719
BsaI GGTCTC 1 cut(s) 310
BsaJI CCNNGG 8 cut(s) 81, 729, 1585, 1620, 1875, 1876, 2211, 2312
BsaXI ACNNNNNCTCC 2 cut(s) 2247, 2277
Bsc4I CCNNNNNNNGG 5 cut(s) 326, 1568, 1626, 1697, 2252
Bse118I RCCGGY 2 cut(s) 540, 661
Bse1I ACTGG 9 cut(s) 93, 339, 478, 652, 897, 1035, 1535, 1834, 2339
Bse8I GATNNNNATC 1 cut(s) 1719
BseBI CCWGG 4 cut(s) 82, 1320, 1877, 1934
BseCI ATCGAT 1 cut(s) 18
BseDI CCNNGG 8 cut(s) 81, 729, 1585, 1620, 1875, 1876, 2211, 2312
BseGI GGATG 2 cut(s) 1332, 2050
BseJI GATNNNNATC 1 cut(s) 1719
BseLI CCNNNNNNNGG 5 cut(s) 326, 1568, 1626, 1697, 2252
BseMII CTCAG 6 cut(s) 687, 1161, 1179, 1305, 1526, 2201
BseNI ACTGG 9 cut(s) 93, 339, 478, 652, 897, 1035, 1535, 1834, 2339
BseRI GAGGAG 2 cut(s) 1760, 1884
BseSI GKGCMC 1 cut(s) 1735
BseXI GCAGC 2 cut(s) 49, 1642
Bsh1236I CGCG 1 cut(s) 1126
BshFI GGCC 5 cut(s) 768, 1323, 1534, 1619, 1831
BshNI GGYRCC 1 cut(s) 664
BshVI ATCGAT 1 cut(s) 18
BsiSI CCGG 3 cut(s) 541, 662, 1324
BslFI GGGAC 2 cut(s) 379, 1557
BslI CCNNNNNNNGG 5 cut(s) 326, 1568, 1626, 1697, 2252
BsmAI GTCTC 3 cut(s) 310, 1999, 2024
BsmFI GGGAC 2 cut(s) 379, 1557
BsmI GAATGC 3 cut(s) 304, 1756, 1816
BsnI GGCC 5 cut(s) 768, 1323, 1534, 1619, 1831
Bso31I GGTCTC 1 cut(s) 310
Bsp1286I GDGCHC 2 cut(s) 1735, 1876
Bsp143I GATC 7 cut(s) 19, 596, 685, 1147, 1993, 2308, 2355
Bsp1720I GCTNAGC 1 cut(s) 1170
Bsp19I CCATGG 1 cut(s) 729
BspACI CCGC 5 cut(s) 321, 890, 1566, 1741, 2100
BspANI GGCC 5 cut(s) 768, 1323, 1534, 1619, 1831
BspCNI CTCAG 6 cut(s) 688, 1162, 1178, 1306, 1525, 2200
BspDI ATCGAT 1 cut(s) 18
BspFNI CGCG 1 cut(s) 1126
BspHI TCATGA 1 cut(s) 1681
BspLI GGNNCC 8 cut(s) 87, 367, 666, 1573, 1804, 1832, 1873, 1938
BspMAI CTGCAG 3 cut(s) 274, 1668, 1903
BspMI ACCTGC 3 cut(s) 97, 1559, 1570
BspPI GGATC 3 cut(s) 1142, 2001, 2303
BspQI GCTCTTC 1 cut(s) 1900
BspT107I GGYRCC 1 cut(s) 664
BspTNI GGTCTC 1 cut(s) 310
BsrFI RCCGGY 2 cut(s) 540, 661
BsrI ACTGG 9 cut(s) 93, 339, 478, 652, 897, 1035, 1535, 1834, 2339
BssAI RCCGGY 2 cut(s) 540, 661
BssECI CCNNGG 8 cut(s) 81, 729, 1585, 1620, 1875, 1876, 2211, 2312
BssMI GATC 7 cut(s) 19, 596, 685, 1147, 1993, 2308, 2355
BssT1I CCWWGG 3 cut(s) 729, 1585, 1620
Bst2UI CCWGG 4 cut(s) 82, 1320, 1877, 1934
Bst4CI ACNGT 8 cut(s) 209, 631, 638, 875, 1306, 1911, 2197, 2263
Bst6I CTCTTC 1 cut(s) 1900
BstBAI YACGTR 1 cut(s) 1658
BstC8I GCNNGC 2 cut(s) 1692, 2282
BstDEI CTNAG 6 cut(s) 696, 1165, 1170, 1314, 1512, 2187
BstDSI CCRYGG 2 cut(s) 729, 2312
BstENI CCTNNNNNAGG 1 cut(s) 1566
BstF5I GGATG 2 cut(s) 1332, 2050
BstFNI CGCG 1 cut(s) 1126
BstH2I RGCGCY 1 cut(s) 737
BstHHI GCGC 1 cut(s) 736
BstKTI GATC 7 cut(s) 22, 599, 688, 1150, 1996, 2311, 2358
BstMAI GTCTC 3 cut(s) 310, 1999, 2024
BstMBI GATC 7 cut(s) 19, 596, 685, 1147, 1993, 2308, 2355
BstMWI GCNNNNNNNGC 6 cut(s) 614, 697, 724, 733, 887, 2343
BstNI CCWGG 4 cut(s) 82, 1320, 1877, 1934
BstNSI RCATGY 1 cut(s) 2077
BstPAI GACNNNNGTC 1 cut(s) 873
BstSCI CCNGG 4 cut(s) 80, 1318, 1875, 1932
BstSFI CTRYAG 4 cut(s) 270, 1664, 1899, 2193
BstSLI GKGCMC 1 cut(s) 1735
BstUI CGCG 1 cut(s) 1126
BstV1I GCAGC 2 cut(s) 49, 1642
BstV2I GAAGAC 2 cut(s) 948, 1031
BstX2I RGATCY 2 cut(s) 1147, 1993
BstYI RGATCY 2 cut(s) 1147, 1993
Bsu15I ATCGAT 1 cut(s) 18
BsuI GTATCC 1 cut(s) 1237
BsuRI GGCC 5 cut(s) 768, 1323, 1534, 1619, 1831
BsuTUI ATCGAT 1 cut(s) 18
BtgI CCRYGG 2 cut(s) 729, 2312
BtsCI GGATG 2 cut(s) 1332, 2050
BtsI GCAGTG 1 cut(s) 1908
BtsIMutI CAGTG 5 cut(s) 158, 205, 769, 904, 1908
BveI ACCTGC 3 cut(s) 97, 1559, 1570
Cac8I GCNNGC 2 cut(s) 1692, 2282
CciI TCATGA 1 cut(s) 1681
CfoI GCGC 1 cut(s) 736
Cfr10I RCCGGY 2 cut(s) 540, 661
Cfr13I GGNCC 5 cut(s) 366, 902, 1571, 1830, 1973
ClaI ATCGAT 1 cut(s) 18
Csp6I GTAC 3 cut(s) 639, 1122, 2198
CspCI CAANNNNNGTGG 2 cut(s) 912, 947
CviQI GTAC 3 cut(s) 639, 1122, 2198
DdeI CTNAG 6 cut(s) 696, 1165, 1170, 1314, 1512, 2187
DpnI GATC 7 cut(s) 21, 598, 687, 1149, 1995, 2310, 2357
DpnII GATC 7 cut(s) 19, 596, 685, 1147, 1993, 2308, 2355
EaeI YGGCCR 1 cut(s) 766
Eam1104I CTCTTC 1 cut(s) 1900
EarI CTCTTC 1 cut(s) 1900
Eco130I CCWWGG 3 cut(s) 729, 1585, 1620
Eco24I GRGCYC 1 cut(s) 1876
Eco31I GGTCTC 1 cut(s) 310
Eco47I GGWCC 4 cut(s) 366, 902, 1571, 1973
Eco57I CTGAAG 3 cut(s) 1125, 1721, 2069
Eco72I CACGTG 1 cut(s) 1658
EcoNI CCTNNNNNAGG 1 cut(s) 1566
EcoO109I RGGNCCY 2 cut(s) 1571, 1973
EcoRI GAATTC 1 cut(s) 1288
EcoRII CCWGG 4 cut(s) 80, 1318, 1875, 1932
EcoT14I CCWWGG 3 cut(s) 729, 1585, 1620
EcoT38I GRGCYC 1 cut(s) 1876
ErhI CCWWGG 3 cut(s) 729, 1585, 1620
FaqI GGGAC 2 cut(s) 379, 1557
FauI CCCGC 2 cut(s) 328, 1734
FauNDI CATATG 1 cut(s) 910
FblI GTMKAC 1 cut(s) 2192
Fnu4HI GCNGC 3 cut(s) 63, 1566, 1631
FokI GGATG 2 cut(s) 1339, 2057
FriOI GRGCYC 1 cut(s) 1876
Fsp4HI GCNGC 3 cut(s) 63, 1566, 1631
FspBI CTAG 9 cut(s) 993, 1497, 1634, 1724, 1770, 1863, 1890, 1941, 1997
GlaI GCGC 1 cut(s) 735
GluI GCNGC 3 cut(s) 63, 1566, 1631
GsuI CTGGAG 1 cut(s) 1135
HaeII RGCGCY 1 cut(s) 737
HaeIII GGCC 5 cut(s) 768, 1323, 1534, 1619, 1831
HapII CCGG 3 cut(s) 541, 662, 1324
HhaI GCGC 1 cut(s) 736
Hin6I GCGC 1 cut(s) 734
HinP1I GCGC 1 cut(s) 734
HincII GTYRAC 2 cut(s) 634, 1441
HindII GTYRAC 2 cut(s) 634, 1441
HindIII AAGCTT 2 cut(s) 2022, 2220
HinfI GANTC 8 cut(s) 186, 759, 1163, 1442, 1501, 1610, 1918, 1963
HpaII CCGG 3 cut(s) 541, 662, 1324
HphI GGTGA 4 cut(s) 296, 1415, 1551, 2089
Hpy166II GTNNAC 5 cut(s) 634, 905, 1441, 1661, 2193
Hpy188III TCNNGA 8 cut(s) 431, 449, 600, 993, 1343, 1682, 1997, 2237
Hpy8I GTNNAC 5 cut(s) 634, 905, 1441, 1661, 2193
HpyCH4III ACNGT 8 cut(s) 209, 631, 638, 875, 1306, 1911, 2197, 2263
HpyCH4IV ACGT 1 cut(s) 1657
HpyF10VI GCNNNNNNNGC 6 cut(s) 614, 697, 724, 733, 887, 2343
HpyF3I CTNAG 6 cut(s) 696, 1165, 1170, 1314, 1512, 2187
HpySE526I ACGT 1 cut(s) 1657
HspAI GCGC 1 cut(s) 734
Kzo9I GATC 7 cut(s) 19, 596, 685, 1147, 1993, 2308, 2355
LguI GCTCTTC 1 cut(s) 1900
LmnI GCTCC 3 cut(s) 1808, 1871, 1942
Lsp1109I GCAGC 2 cut(s) 49, 1642
LweI GCATC 7 cut(s) 727, 877, 910, 1183, 1677, 2197, 2278
MaeI CTAG 9 cut(s) 993, 1497, 1634, 1724, 1770, 1863, 1890, 1941, 1997
MaeII ACGT 1 cut(s) 1657
MaeIII GTNAC 3 cut(s) 203, 1557, 1836
MalI GATC 7 cut(s) 21, 598, 687, 1149, 1995, 2310, 2357
MboI GATC 7 cut(s) 19, 596, 685, 1147, 1993, 2308, 2355
MfeI CAATTG 1 cut(s) 1673
MflI RGATCY 2 cut(s) 1147, 1993
MhlI GDGCHC 2 cut(s) 1735, 1876
MlsI TGGCCA 1 cut(s) 768
MluI ACGCGT 1 cut(s) 1124
MluNI TGGCCA 1 cut(s) 768
MlyI GAGTC 3 cut(s) 768, 1157, 1436
MmeI TCCRAC 2 cut(s) 1470, 2029
Mox20I TGGCCA 1 cut(s) 768
MroXI GAANNNNTTC 2 cut(s) 2262, 2329
MscI TGGCCA 1 cut(s) 768
MseI TTAA 7 cut(s) 105, 116, 402, 455, 1385, 1913, 2175
MslI CAYNNNNRTG 1 cut(s) 876
Msp20I TGGCCA 1 cut(s) 768
MspA1I CMGCKG 2 cut(s) 1169, 1741
MspI CCGG 3 cut(s) 541, 662, 1324
MspR9I CCNGG 4 cut(s) 82, 1320, 1877, 1934
MunI CAATTG 1 cut(s) 1673
Mva1269I GAATGC 3 cut(s) 304, 1756, 1816
MvaI CCWGG 4 cut(s) 82, 1320, 1877, 1934
MvnI CGCG 1 cut(s) 1126
MwoI GCNNNNNNNGC 6 cut(s) 614, 697, 724, 733, 887, 2343
NcoI CCATGG 1 cut(s) 729
NdeI CATATG 1 cut(s) 910
NdeII GATC 7 cut(s) 19, 596, 685, 1147, 1993, 2308, 2355
NlaIV GGNNCC 8 cut(s) 87, 367, 666, 1573, 1804, 1832, 1873, 1938
NmuCI GTSAC 3 cut(s) 203, 1557, 1836
NspI RCATGY 1 cut(s) 2077
PagI TCATGA 1 cut(s) 1681
PaqCI CACCTGC 1 cut(s) 1570
PasI CCCWGGG 1 cut(s) 1876
PciI ACATGT 1 cut(s) 2073
PciSI GCTCTTC 1 cut(s) 1900
PctI GAATGC 3 cut(s) 304, 1756, 1816
PdmI GAANNNNTTC 2 cut(s) 2262, 2329
PfeI GAWTC 5 cut(s) 186, 1501, 1610, 1918, 1963
PflMI CCANNNNNTGG 1 cut(s) 2252
PkrI GCNGC 3 cut(s) 64, 1567, 1632
PleI GAGTC 3 cut(s) 767, 1157, 1436
PmaCI CACGTG 1 cut(s) 1658
PmlI CACGTG 1 cut(s) 1658
PpsI GAGTC 3 cut(s) 767, 1157, 1436
Ppu21I YACGTR 1 cut(s) 1658
PpuMI RGGWCCY 2 cut(s) 1571, 1973
PscI ACATGT 1 cut(s) 2073
PshAI GACNNNNGTC 1 cut(s) 873
PshBI ATTAAT 1 cut(s) 2175
Psp5II RGGWCCY 2 cut(s) 1571, 1973
Psp6I CCWGG 4 cut(s) 80, 1318, 1875, 1932
PspCI CACGTG 1 cut(s) 1658
PspGI CCWGG 4 cut(s) 80, 1318, 1875, 1932
PspN4I GGNNCC 8 cut(s) 87, 367, 666, 1573, 1804, 1832, 1873, 1938
PspPI GGNCC 5 cut(s) 366, 902, 1571, 1830, 1973
PspPPI RGGWCCY 2 cut(s) 1571, 1973
PstI CTGCAG 3 cut(s) 274, 1668, 1903
PsuI RGATCY 2 cut(s) 1147, 1993
PvuII CAGCTG 1 cut(s) 1169
RsaI GTAC 3 cut(s) 640, 1123, 2199
RsaNI GTAC 3 cut(s) 639, 1122, 2198
RseI CAYNNNNRTG 1 cut(s) 876
SapI GCTCTTC 1 cut(s) 1900
SaqAI TTAA 7 cut(s) 105, 116, 402, 455, 1385, 1913, 2175
SatI GCNGC 3 cut(s) 63, 1566, 1631
Sau3AI GATC 7 cut(s) 19, 596, 685, 1147, 1993, 2308, 2355
Sau96I GGNCC 5 cut(s) 366, 902, 1571, 1830, 1973
SchI GAGTC 3 cut(s) 768, 1157, 1436
ScrFI CCNGG 4 cut(s) 82, 1320, 1877, 1934
SduI GDGCHC 2 cut(s) 1735, 1876
SfaNI GCATC 7 cut(s) 727, 877, 910, 1183, 1677, 2197, 2278
SfcI CTRYAG 4 cut(s) 270, 1664, 1899, 2193
SinI GGWCC 4 cut(s) 366, 902, 1571, 1973
SmiMI CAYNNNNRTG 1 cut(s) 876
SsiI CCGC 5 cut(s) 321, 890, 1566, 1741, 2100
SspMI CTAG 9 cut(s) 993, 1497, 1634, 1724, 1770, 1863, 1890, 1941, 1997
StyD4I CCNGG 4 cut(s) 80, 1318, 1875, 1932
StyI CCWWGG 3 cut(s) 729, 1585, 1620
TaaI ACNGT 8 cut(s) 209, 631, 638, 875, 1306, 1911, 2197, 2263
TaiI ACGT 1 cut(s) 1660
TaqI TCGA 5 cut(s) 18, 599, 1056, 1882, 2354
TaqII GACCGA 1 cut(s) 383
TatI WGTACW 2 cut(s) 638, 2197
TauI GCSGC 1 cut(s) 1568
TfiI GAWTC 5 cut(s) 186, 1501, 1610, 1918, 1963
Tru1I TTAA 7 cut(s) 105, 116, 402, 455, 1385, 1913, 2175
Tru9I TTAA 7 cut(s) 105, 116, 402, 455, 1385, 1913, 2175
TscAI CASTG 5 cut(s) 165, 212, 769, 904, 1908
TseFI GTSAC 3 cut(s) 203, 1557, 1836
TseI GCWGC 2 cut(s) 62, 1630
Tsp45I GTSAC 3 cut(s) 203, 1557, 1836
TspDTI ATGAA 7 cut(s) 178, 273, 728, 954, 1455, 1731, 2322
TspGWI ACGGA 1 cut(s) 2301
TspRI CASTG 5 cut(s) 165, 212, 769, 904, 1908
Van91I CCANNNNNTGG 1 cut(s) 2252
VpaK11BI GGWCC 4 cut(s) 366, 902, 1571, 1973
VspI ATTAAT 1 cut(s) 2175
XagI CCTNNNNNAGG 1 cut(s) 1566
XapI RAATTY 3 cut(s) 334, 1270, 1288
XbaI TCTAGA 2 cut(s) 992, 1996
XceI RCATGY 1 cut(s) 2077
XmiI GTMKAC 1 cut(s) 2192
XmnI GAANNNNTTC 2 cut(s) 2262, 2329
XspI CTAG 9 cut(s) 993, 1497, 1634, 1724, 1770, 1863, 1890, 1941, 1997
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.