Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000003

Orthogroup ID

OG0003873

Physical Location & Seq

Genomic Coordinates Forward (+)

31311123 .. 31313201

Gene Structure 2079 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug03G0299700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2079 bp

ATGTGTCCCCAAGCTCCCACTTTGCATCACTTATTCTTTGCAGATGATAGTCTCTTATTTGGGGCAGCCACTGCTGTTGAATGTCACACTTACAGACATATTTTGACCACTTATGAGAGGGCTTCTGGTCAGAAGATTAACTTCCAAAAAAGCAGTGTTGTTTTTAGCCGTAATGTACATGCAGAGACCCAAGCTGATTTGGCTGCCATATTGGAAGTCAAGTGTGAAACGGAGCATGACAGGTACTTGGGCCTCCCATTACGTGTTGGAAAATCCAAAACTCAAATTTTCCAATATATCAAGGAAAAACTGTCAACGAAATTGGAGAATTGGAAGTCCAAGATACTAAGCTGTGCAGGTAAAGAGATTCTGATAAAAGCGGTGGCTCAAACTATGCCGCTATATGCTATGAATTGTTACTTGCTCCCTAAGAGTTTATGTGATGATGTACATAAGATGTGTGCGTCTTTCTTTTGGGGGGACACAAATGAAAAAAAGAAAATTCACTGGAGAAGCTGGGAACGTCTATGTCTCACAAAGCAAGAAGGAGGTATGAGTTTTAAAAATATTTATGCATATAACCTTGCTATGTTGGCTAAGCAAGGCTGGAGGATTGTCACAAACCCCACTTCACTTATTGCTAGATTGTACAAAGCTAGGTACTTTCCAAACTGTGACTTTTGGAATGCAGACCTCGGTGATGCGCCTTCTTTCTCTTGGAGAAGTATTCTTGCAGGAAGACCTGTTTTAAAAGCGGGCTGTAGATGGCGAATTGGTGATGGTCTGAGTGTGATTATCTGGCAAGATCAATGGGTTTTCAACTGTTCACAATATCTCATTCAGCGCCCTATGCCTTCTCCGGTTGAGGTAGTAGCTGATCTCATTGATGCATCGACGAGAACATGGCTTCCAAATATGGTACACTCTGTTTTTCACCCTACAGTTGCTACTAAAGTGCTCAACATCCCACTTAGTCAACATAGCACTCGTGATAGACATTATTGGCGCTTAGAACGAAGGGGCTGGTTCACAGTTAAAAGCCCGTACTGGATTGCTCGTGGACAAGTTTTAGGTAATGCTCTTGCATCTTCATCTATTGGAGATCCTTTTAAGGAGTTGTGGAGAAAACTTTGGAAGGCTAATGTTCCTGGGAAGGTCCGGATTTTTGTGTGGAGGGCCTGCTGCAATTTGTTACCTACACGAGAACGGTTAATGACTAAGGGATATGAAGGTGACCTTCAATGCCTCTTGTGCAATCATCCAATTGAAGATGCAGCTCATCTTTTTTGTAAGTGTCCTACGGCCTCCATCTTGCTTTCTCAGCTTCCTTTTCACCTTCAACACTCACTGCTTCCTCAACTCCACTTCAAAGAATGGATGTTGGAGCAGGCTATGCATCTTAAAGGAGAAGTCTTTGACAGACTATTGATGCTCATTTGGGGTCTATGGAATAATAGAAACACTAAATTATGGGAGAATAATGAGCGCAGTTCCTCAGATATTCTACTCGGATGTATGACCTGGTTGGAAGAGTTCCAAAGGTCGAGAGCTTCTAATGCAGCACTGAAACACTCTATCACCAAGATTTGGAAGCCAGCAGAGGCACCTATGCTTAAACTGAATGTGGATGGTGCATTTGTGCCTCACCTAACTAAGGGTGGAATTGGCGGTATTCTTCGAACCTCCAGTGGAGCAGTTTGTGCTGCTTTTCAGAAGACTGCTCAATATGTTAGCTCTGCTGTCCATATTGAGCTCCTTGCTATACAGTCTGGTTTGGAATTCATAAAGCAACACAATTATCAGTCAGTATGTATTGAAACCGATTGCCAACTTGCAGTCCACGACATCACCAGTTTATGTCCAGTTCTCAATGAGTATGGGCCTTTGATTGACGACATTCAACACACCTGGAAAAGCTTGCAGCAGGTTCAAATATGTTTTGCTCCCCGAACTTGTAATCGAATTGCTCATAGACTAGCTAGTTTGGCATTCGAGTTTGAGCAGTGTGTTGACTGGTTCAACCACACTCCAGAATGTATCTGTGATCTTGTAAACAAGGAGCTACCACCTCCCACTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

zf-RING_2

Protein Analysis

692

Amino Acids

79.19

Weight (kDa)

8.89

Isoelectric Point (pI)

43.39

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-RVT	PF13966	372 - 436	8.4e-16	zinc-binding in reverse transcriptase
RVT_3	PF13456	541 - 662	1.3e-22	Reverse transcriptase-like

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003873)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G04790
fragaria_vesca	FvH4_4g00300 FvH4_4g00300 FvH4_4g00300 FvH4_4g00300 FvH4_4g00300 FvH4_4g00300 FvH4_4g00300 FvH4_4g00300 FvH4_4g00300 FvH4_4g00300 FvH4_4g00300 FvH4_4g00300 FvH4_4g00300
malus_domestica	MD04G1003700.v1.1
prunus_persica	Prupe.1G003200_v2.0.a1 Prupe.1G003200_v2.0.a1 Prupe.1G003200_v2.0.a1 Prupe.1G003200_v2.0.a1 Prupe.1G003200_v2.0.a1
pyrus_communis	pycom04g00380
rosa_chinensis	RchiOBHm_Chr4g0385131
rosa_laevigata	RLG00000010255
rosa_multiflora	Rmu_co8075098.1_g000001 Rmu_sc0003086.1_g000006 Rmu_sc0008734.1_g000019
rosa_roxburghii	Rroxscaffold_5G00333050
rosa_rugosa	Rorug03G0299700 Rorug03G0299800
rosa_samantha	Rh4AG003000 Rh4BG002400 Rh4CG003200 Rh4DG002700
rosa_wichuraiana	Rw4G000630

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	347, 1915
AccB1I	GGYRCC	1 cut(s)	1603
AccB7I	CCANNNNNTGG	1 cut(s)	1587
AccIII	TCCGGA	1 cut(s)	1158
AciI	CCGC	4 cut(s)	380, 398, 755, 1668
AclWI	GGATC	1 cut(s)	1097
AcsI	RAATTY	3 cut(s)	285, 501, 1778
AfaI	GTAC	7 cut(s)	177, 245, 450, 650, 662, 921, 1046
AfiI	CCNNNNNNNGG	2 cut(s)	1587, 1654
AflIII	ACRYGT	1 cut(s)	262
AjnI	CCWGG	3 cut(s)	1147, 1520, 1907
AloI	GAACNNNNNNTCC	2 cut(s)	892, 924
Alw21I	GWGCWC	2 cut(s)	960, 1755
Alw26I	GTCTC	3 cut(s)	56, 179, 536
AlwI	GGATC	1 cut(s)	1097
AlwNI	CAGNNNCTG	1 cut(s)	71
Aor13HI	TCCGGA	1 cut(s)	1158
AoxI	GGCC	4 cut(s)	250, 1176, 1302, 1880
ApeKI	GCWGC	7 cut(s)	65, 203, 1182, 1274, 1559, 1703, 1921
ApoI	RAATTY	3 cut(s)	285, 501, 1778
AspLEI	GCGC	4 cut(s)	706, 846, 1008, 1488
AspS9I	GGNCC	4 cut(s)	250, 1156, 1176, 1880
AsuHPI	GGTGA	8 cut(s)	710, 788, 926, 1244, 1325, 1570, 1637, 1840
AsuII	TTCGAA	1 cut(s)	1678
AvaII	GGWCC	1 cut(s)	1156
BanI	GGYRCC	1 cut(s)	1603
BanII	GRGCYC	1 cut(s)	1755
BauI	CACGAG	3 cut(s)	987, 1056, 1200
BbsI	GAAGAC	2 cut(s)	745, 1721
Bbv12I	GWGCWC	2 cut(s)	960, 1755
BbvI	GCAGC	7 cut(s)	77, 190, 1169, 1286, 1571, 1690, 1933
BccI	CCATC	4 cut(s)	759, 773, 1316, 1622
BceAI	ACGGC	2 cut(s)	153, 1317
BciT130I	CCWGG	3 cut(s)	1149, 1522, 1909
BcoDI	GTCTC	3 cut(s)	56, 179, 536
BfaI	CTAG	4 cut(s)	642, 657, 1976, 1980
BfmI	CTRYAG	2 cut(s)	760, 939
BfoI	RGCGCY	2 cut(s)	847, 1009
BfuAI	ACCTGC	2 cut(s)	347, 1915
BisI	GCNGC	8 cut(s)	66, 204, 398, 1183, 1275, 1560, 1704, 1922
BlpI	GCTNAGC	1 cut(s)	597
BlsI	GCNGC	8 cut(s)	67, 205, 399, 1184, 1276, 1561, 1705, 1923
Bme1390I	CCNGG	3 cut(s)	1149, 1522, 1909
Bme18I	GGWCC	1 cut(s)	1156
BmgT120I	GGNCC	4 cut(s)	250, 1156, 1176, 1880
BmiI	GGNNCC	1 cut(s)	1605
BmrFI	CCNGG	3 cut(s)	1149, 1522, 1909
BmsI	GCATC	8 cut(s)	34, 691, 877, 899, 1094, 1261, 1405, 1419
BpiI	GAAGAC	2 cut(s)	745, 1721
BpmI	CTGGAG	4 cut(s)	529, 628, 1669, 2013
Bpu1102I	GCTNAGC	1 cut(s)	597
Bpu14I	TTCGAA	1 cut(s)	1678
BsaAI	YACGTR	1 cut(s)	263
BsaI	GGTCTC	1 cut(s)	179
BsaJI	CCNNGG	2 cut(s)	694, 1148
BsaWI	WCCGGW	2 cut(s)	859, 1158
Bsc4I	CCNNNNNNNGG	2 cut(s)	1587, 1654
Bse1I	ACTGG	6 cut(s)	512, 1052, 1686, 1851, 1862, 2018
BseAI	TCCGGA	1 cut(s)	1158
BseBI	CCWGG	3 cut(s)	1149, 1522, 1909
BseDI	CCNNGG	2 cut(s)	694, 1148
BseGI	GGATG	5 cut(s)	963, 1258, 1383, 1517, 1633
BseLI	CCNNNNNNNGG	2 cut(s)	1587, 1654
BseMII	CTCAG	3 cut(s)	776, 1334, 1509
BseNI	ACTGG	6 cut(s)	512, 1052, 1686, 1851, 1862, 2018
BseXI	GCAGC	7 cut(s)	77, 190, 1169, 1286, 1571, 1690, 1933
BseYI	CCCAGC	1 cut(s)	516
BsgI	GTGCAG	1 cut(s)	375
BshFI	GGCC	4 cut(s)	252, 1178, 1304, 1882
BshNI	GGYRCC	1 cut(s)	1603
BsiHKAI	GWGCWC	2 cut(s)	960, 1755
BsiSI	CCGG	2 cut(s)	860, 1159
BslFI	GGGAC	1 cut(s)	494
BslI	CCNNNNNNNGG	2 cut(s)	1587, 1654
BsmAI	GTCTC	3 cut(s)	56, 179, 536
BsmFI	GGGAC	1 cut(s)	494
BsmI	GAATGC	2 cut(s)	691, 1988
BsnI	GGCC	4 cut(s)	252, 1178, 1304, 1882
Bso31I	GGTCTC	1 cut(s)	179
Bsp119I	TTCGAA	1 cut(s)	1678
Bsp1286I	GDGCHC	2 cut(s)	960, 1755
Bsp13I	TCCGGA	1 cut(s)	1158
Bsp1407I	TGTACA	3 cut(s)	175, 448, 648
Bsp143I	GATC	4 cut(s)	805, 877, 1102, 2044
Bsp1720I	GCTNAGC	1 cut(s)	597
BspACI	CCGC	4 cut(s)	380, 398, 755, 1668
BspANI	GGCC	4 cut(s)	252, 1178, 1304, 1882
BspCNI	CTCAG	3 cut(s)	777, 1333, 1508
BspEI	TCCGGA	1 cut(s)	1158
BspLI	GGNNCC	1 cut(s)	1605
BspMI	ACCTGC	2 cut(s)	347, 1915
BspPI	GGATC	1 cut(s)	1097
BspT104I	TTCGAA	1 cut(s)	1678
BspT107I	GGYRCC	1 cut(s)	1603
BspTNI	GGTCTC	1 cut(s)	179
BsrGI	TGTACA	3 cut(s)	175, 448, 648
BsrI	ACTGG	6 cut(s)	512, 1052, 1686, 1851, 1862, 2018
BssECI	CCNNGG	2 cut(s)	694, 1148
BssMI	GATC	4 cut(s)	805, 877, 1102, 2044
BssSI	CACGAG	3 cut(s)	987, 1056, 1200
Bst2BI	CACGAG	3 cut(s)	987, 1056, 1200
Bst2UI	CCWGG	3 cut(s)	1149, 1522, 1909
Bst4CI	ACNGT	7 cut(s)	312, 674, 824, 943, 1033, 1209, 1767
Bst6I	CTCTTC	1 cut(s)	1524
BstAPI	GCANNNNNTGC	3 cut(s)	71, 1393, 1700
BstAUI	TGTACA	3 cut(s)	175, 448, 648
BstBAI	YACGTR	1 cut(s)	263
BstBI	TTCGAA	1 cut(s)	1678
BstC8I	GCNNGC	5 cut(s)	757, 1180, 1389, 1596, 1919
BstEII	GGTNACC	1 cut(s)	1232
BstENI	CCTNNNNNAGG	1 cut(s)	1652
BstF5I	GGATG	5 cut(s)	963, 1258, 1383, 1517, 1633
BstH2I	RGCGCY	2 cut(s)	847, 1009
BstHHI	GCGC	4 cut(s)	706, 846, 1008, 1488
BstKTI	GATC	4 cut(s)	808, 880, 1105, 2047
BstMAI	GTCTC	3 cut(s)	56, 179, 536
BstMBI	GATC	4 cut(s)	805, 877, 1102, 2044
BstNI	CCWGG	3 cut(s)	1149, 1522, 1909
BstNSI	RCATGY	1 cut(s)	182
BstPI	GGTNACC	1 cut(s)	1232
BstSCI	CCNGG	3 cut(s)	1147, 1520, 1907
BstSFI	CTRYAG	2 cut(s)	760, 939
BstV1I	GCAGC	7 cut(s)	77, 190, 1169, 1286, 1571, 1690, 1933
BstV2I	GAAGAC	2 cut(s)	745, 1721
BstX2I	RGATCY	1 cut(s)	1102
BstYI	RGATCY	1 cut(s)	1102
BsuRI	GGCC	4 cut(s)	252, 1178, 1304, 1882
BtsCI	GGATG	5 cut(s)	963, 1258, 1383, 1517, 1633
BtsI	GCAGTG	4 cut(s)	69, 160, 1346, 2009
BtsIMutI	CAGTG	7 cut(s)	69, 160, 505, 1346, 1562, 1693, 2009
BveI	ACCTGC	2 cut(s)	347, 1915
Cac8I	GCNNGC	5 cut(s)	757, 1180, 1389, 1596, 1919
CaiI	CAGNNNCTG	1 cut(s)	71
CfoI	GCGC	4 cut(s)	706, 846, 1008, 1488
Cfr13I	GGNCC	4 cut(s)	250, 1156, 1176, 1880
CseI	GACGC	1 cut(s)	453
CsiI	ACCWGGT	1 cut(s)	1520
Csp6I	GTAC	7 cut(s)	176, 244, 449, 649, 661, 920, 1045
CspCI	CAANNNNNGTGG	2 cut(s)	58, 93
CviAII	CATG	3 cut(s)	179, 236, 903
CviQI	GTAC	7 cut(s)	176, 244, 449, 649, 661, 920, 1045
DpnI	GATC	4 cut(s)	807, 879, 1104, 2046
DpnII	GATC	4 cut(s)	805, 877, 1102, 2044
DraI	TTTAAA	2 cut(s)	562, 750
Eam1104I	CTCTTC	1 cut(s)	1524
EarI	CTCTTC	1 cut(s)	1524
Ecl136II	GAGCTC	1 cut(s)	1753
Eco24I	GRGCYC	1 cut(s)	1755
Eco31I	GGTCTC	1 cut(s)	179
Eco47I	GGWCC	1 cut(s)	1156
Eco53kI	GAGCTC	1 cut(s)	1753
Eco91I	GGTNACC	1 cut(s)	1232
EcoICRI	GAGCTC	1 cut(s)	1753
EcoNI	CCTNNNNNAGG	1 cut(s)	1652
EcoO109I	RGGNCCY	1 cut(s)	1176
EcoO65I	GGTNACC	1 cut(s)	1232
EcoRI	GAATTC	1 cut(s)	1778
EcoRII	CCWGG	3 cut(s)	1147, 1520, 1907
EcoT22I	ATGCAT	3 cut(s)	577, 892, 1398
EcoT38I	GRGCYC	1 cut(s)	1755
FaeI	CATG	3 cut(s)	182, 239, 906
FalI	AAGNNNNNCTT	4 cut(s)	125, 157, 1221, 1253
FaqI	GGGAC	1 cut(s)	494
FatI	CATG	3 cut(s)	178, 235, 902
FauI	CCCGC	1 cut(s)	748
Fnu4HI	GCNGC	8 cut(s)	66, 204, 398, 1183, 1275, 1560, 1704, 1922
FokI	GGATG	5 cut(s)	950, 1245, 1390, 1524, 1640
FriOI	GRGCYC	1 cut(s)	1755
Fsp4HI	GCNGC	8 cut(s)	66, 204, 398, 1183, 1275, 1560, 1704, 1922
FspBI	CTAG	4 cut(s)	642, 657, 1976, 1980
GlaI	GCGC	4 cut(s)	705, 845, 1007, 1487
GluI	GCNGC	8 cut(s)	66, 204, 398, 1183, 1275, 1560, 1704, 1922
GsaI	CCCAGC	1 cut(s)	520
GsuI	CTGGAG	4 cut(s)	529, 628, 1669, 2013
HaeII	RGCGCY	2 cut(s)	847, 1009
HaeIII	GGCC	4 cut(s)	252, 1178, 1304, 1882
HapII	CCGG	2 cut(s)	860, 1159
HgaI	GACGC	1 cut(s)	453
HhaI	GCGC	4 cut(s)	706, 846, 1008, 1488
Hin1II	CATG	3 cut(s)	182, 239, 906
Hin6I	GCGC	4 cut(s)	704, 844, 1006, 1486
HinP1I	GCGC	4 cut(s)	704, 844, 1006, 1486
HincII	GTYRAC	3 cut(s)	315, 977, 2011
HindII	GTYRAC	3 cut(s)	315, 977, 2011
HindIII	AAGCTT	1 cut(s)	1915
HinfI	GANTC	1 cut(s)	367
HpaII	CCGG	2 cut(s)	860, 1159
HphI	GGTGA	8 cut(s)	710, 788, 926, 1244, 1325, 1570, 1637, 1840
Hpy166II	GTNNAC	9 cut(s)	315, 827, 922, 977, 1029, 1061, 1840, 2011, 2053
Hpy188I	TCNGA	6 cut(s)	132, 372, 786, 1498, 1511, 1713
Hpy188III	TCNNGA	4 cut(s)	989, 1159, 1545, 2030
Hpy8I	GTNNAC	9 cut(s)	315, 827, 922, 977, 1029, 1061, 1840, 2011, 2053
Hpy99I	CGWCG	1 cut(s)	898
HpyAV	CCTTC	9 cut(s)	539, 717, 864, 1011, 1129, 1147, 1223, 1247, 1346
HpyCH4III	ACNGT	7 cut(s)	312, 674, 824, 943, 1033, 1209, 1767
HpyCH4IV	ACGT	2 cut(s)	262, 523
HpySE526I	ACGT	2 cut(s)	262, 523
Hsp92II	CATG	3 cut(s)	182, 239, 906
HspAI	GCGC	4 cut(s)	704, 844, 1006, 1486
Kpn2I	TCCGGA	1 cut(s)	1158
Kzo9I	GATC	4 cut(s)	805, 877, 1102, 2044
LmnI	GCTCC	8 cut(s)	19, 232, 429, 1384, 1691, 1758, 1948, 2059
Lsp1109I	GCAGC	7 cut(s)	77, 190, 1169, 1286, 1571, 1690, 1933
LweI	GCATC	8 cut(s)	34, 691, 877, 899, 1094, 1261, 1405, 1419
MabI	ACCWGGT	1 cut(s)	1520
MaeI	CTAG	4 cut(s)	642, 657, 1976, 1980
MaeII	ACGT	2 cut(s)	262, 523
MaeIII	GTNAC	6 cut(s)	83, 416, 616, 674, 1191, 1232
MalI	GATC	4 cut(s)	807, 879, 1104, 2046
MboI	GATC	4 cut(s)	805, 877, 1102, 2044
MboII	GAAGA	7 cut(s)	145, 750, 1080, 1280, 1541, 1667, 1726
MfeI	CAATTG	1 cut(s)	1263
MflI	RGATCY	1 cut(s)	1102
MhlI	GDGCHC	2 cut(s)	960, 1755
MmeI	TCCRAC	3 cut(s)	247, 1362, 1506
Mph1103I	ATGCAT	3 cut(s)	577, 892, 1398
MroI	TCCGGA	1 cut(s)	1158
MseI	TTAA	9 cut(s)	138, 561, 749, 1035, 1110, 1211, 1401, 1614, 2077
MspI	CCGG	2 cut(s)	860, 1159
MspR9I	CCNGG	3 cut(s)	1149, 1522, 1909
MunI	CAATTG	1 cut(s)	1263
Mva1269I	GAATGC	2 cut(s)	691, 1988
MvaI	CCWGG	3 cut(s)	1149, 1522, 1909
NdeII	GATC	4 cut(s)	805, 877, 1102, 2044
NlaIII	CATG	3 cut(s)	182, 239, 906
NlaIV	GGNNCC	1 cut(s)	1605
NmuCI	GTSAC	4 cut(s)	83, 616, 674, 1232
NsiI	ATGCAT	3 cut(s)	577, 892, 1398
NspI	RCATGY	1 cut(s)	182
NspV	TTCGAA	1 cut(s)	1678
PctI	GAATGC	2 cut(s)	691, 1988
PfeI	GAWTC	1 cut(s)	367
PflMI	CCANNNNNTGG	1 cut(s)	1587
PkrI	GCNGC	8 cut(s)	67, 205, 399, 1184, 1276, 1561, 1705, 1923
Ppu21I	YACGTR	1 cut(s)	263
Psp124BI	GAGCTC	1 cut(s)	1755
Psp6I	CCWGG	3 cut(s)	1147, 1520, 1907
PspEI	GGTNACC	1 cut(s)	1232
PspFI	CCCAGC	1 cut(s)	516
PspGI	CCWGG	3 cut(s)	1147, 1520, 1907
PspN4I	GGNNCC	1 cut(s)	1605
PspPI	GGNCC	4 cut(s)	250, 1156, 1176, 1880
PstNI	CAGNNNCTG	1 cut(s)	71
PsuI	RGATCY	1 cut(s)	1102
RsaI	GTAC	7 cut(s)	177, 245, 450, 650, 662, 921, 1046
RsaNI	GTAC	7 cut(s)	176, 244, 449, 649, 661, 920, 1045
SacI	GAGCTC	1 cut(s)	1755
SaqAI	TTAA	9 cut(s)	138, 561, 749, 1035, 1110, 1211, 1401, 1614, 2077
SatI	GCNGC	8 cut(s)	66, 204, 398, 1183, 1275, 1560, 1704, 1922
Sau3AI	GATC	4 cut(s)	805, 877, 1102, 2044
Sau96I	GGNCC	4 cut(s)	250, 1156, 1176, 1880
ScrFI	CCNGG	3 cut(s)	1149, 1522, 1909
SduI	GDGCHC	2 cut(s)	960, 1755
SexAI	ACCWGGT	1 cut(s)	1520
SfaNI	GCATC	8 cut(s)	34, 691, 877, 899, 1094, 1261, 1405, 1419
SfcI	CTRYAG	2 cut(s)	760, 939
SfuI	TTCGAA	1 cut(s)	1678
SinI	GGWCC	1 cut(s)	1156
SsiI	CCGC	4 cut(s)	380, 398, 755, 1668
SspI	AATATT	1 cut(s)	568
SspMI	CTAG	4 cut(s)	642, 657, 1976, 1980
SstI	GAGCTC	1 cut(s)	1755
StyD4I	CCNGG	3 cut(s)	1147, 1520, 1907
TaaI	ACNGT	7 cut(s)	312, 674, 824, 943, 1033, 1209, 1767
TaiI	ACGT	2 cut(s)	265, 526
TaqI	TCGA	5 cut(s)	893, 1544, 1678, 1960, 1992
TatI	WGTACW	3 cut(s)	175, 448, 648
TauI	GCSGC	1 cut(s)	400
TfiI	GAWTC	1 cut(s)	367
Tru1I	TTAA	9 cut(s)	138, 561, 749, 1035, 1110, 1211, 1401, 1614, 2077
Tru9I	TTAA	9 cut(s)	138, 561, 749, 1035, 1110, 1211, 1401, 1614, 2077
TscAI	CASTG	7 cut(s)	76, 160, 512, 1353, 1569, 1693, 2009
TseFI	GTSAC	4 cut(s)	83, 616, 674, 1232
TseI	GCWGC	7 cut(s)	65, 203, 1182, 1274, 1559, 1703, 1921
Tsp45I	GTSAC	4 cut(s)	83, 616, 674, 1232
TspDTI	ATGAA	5 cut(s)	425, 504, 1080, 1242, 1771
TspGWI	ACGGA	1 cut(s)	245
TspRI	CASTG	7 cut(s)	76, 160, 512, 1353, 1569, 1693, 2009
Van91I	CCANNNNNTGG	1 cut(s)	1587
VpaK11BI	GGWCC	1 cut(s)	1156
XagI	CCTNNNNNAGG	1 cut(s)	1652
XapI	RAATTY	3 cut(s)	285, 501, 1778
XceI	RCATGY	1 cut(s)	182
XspI	CTAG	4 cut(s)	642, 657, 1976, 1980
Zsp2I	ATGCAT	3 cut(s)	577, 892, 1398

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.