RING-like zinc finger
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G04790 |
| fragaria_vesca | FvH4_4g00300 FvH4_4g00300 FvH4_4g00300 FvH4_4g00300 FvH4_4g00300 FvH4_4g00300 FvH4_4g00300 FvH4_4g00300 FvH4_4g00300 FvH4_4g00300 FvH4_4g00300 FvH4_4g00300 FvH4_4g00300 |
| malus_domestica | MD04G1003700.v1.1 |
| prunus_persica | Prupe.1G003200_v2.0.a1 Prupe.1G003200_v2.0.a1 Prupe.1G003200_v2.0.a1 Prupe.1G003200_v2.0.a1 Prupe.1G003200_v2.0.a1 |
| pyrus_communis | pycom04g00380 |
| rosa_chinensis | RchiOBHm_Chr4g0385131 |
| rosa_laevigata | RLG00000010255 |
| rosa_multiflora | Rmu_co8075098.1_g000001 Rmu_sc0003086.1_g000006 Rmu_sc0008734.1_g000019 |
| rosa_roxburghii | Rroxscaffold_5G00333050 |
| rosa_rugosa | Rorug03G0299700 Rorug03G0299800 |
| rosa_samantha | Rh4AG003000 Rh4BG002400 Rh4CG003200 Rh4DG002700 |
| rosa_wichuraiana | Rw4G000630 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 1648 |
| Acc36I | ACCTGC | 2 cut(s) | 1648, 2509 |
| Acc65I | GGTACC | 1 cut(s) | 127 |
| AccB1I | GGYRCC | 2 cut(s) | 127, 1765 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 2356 |
| AccI | GTMKAC | 1 cut(s) | 999 |
| AccIII | TCCGGA | 1 cut(s) | 393 |
| AciI | CCGC | 1 cut(s) | 2099 |
| AclWI | GGATC | 8 cut(s) | 678, 691, 767, 779, 1573, 1586, 2067, 2407 |
| AcoI | YGGCCR | 1 cut(s) | 847 |
| AcuI | CTGAAG | 4 cut(s) | 66, 1041, 1371, 1374 |
| AdeI | CACNNNGTG | 1 cut(s) | 587 |
| AfaI | GTAC | 7 cut(s) | 129, 442, 864, 1114, 2019, 2369, 2458 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 393, 1646, 1775, 2027, 2356, 2422 |
| AflIII | ACRYGT | 1 cut(s) | 1202 |
| AhlI | ACTAGT | 1 cut(s) | 292 |
| AjnI | CCWGG | 2 cut(s) | 1259, 1325 |
| Alw26I | GTCTC | 5 cut(s) | 151, 1436, 1579, 1959, 2319 |
| AlwI | GGATC | 8 cut(s) | 678, 691, 767, 779, 1573, 1586, 2067, 2407 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1915 |
| Ama87I | CYCGRG | 3 cut(s) | 1611, 1956, 1962 |
| Aor13HI | TCCGGA | 1 cut(s) | 393 |
| AoxI | GGCC | 4 cut(s) | 257, 847, 1411, 1424 |
| ApeKI | GCWGC | 6 cut(s) | 645, 1122, 1436, 1643, 1816, 1819 |
| AseI | ATTAAT | 1 cut(s) | 2241 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 1937, 2433 |
| Asp718I | GGTACC | 1 cut(s) | 127 |
| AspLEI | GCGC | 1 cut(s) | 2506 |
| AspS9I | GGNCC | 2 cut(s) | 257, 1424 |
| AsuC2I | CCSGG | 2 cut(s) | 1957, 1958 |
| AsuHPI | GGTGA | 4 cut(s) | 599, 978, 1529, 1629 |
| AsuII | TTCGAA | 1 cut(s) | 2531 |
| AvaI | CYCGRG | 3 cut(s) | 1611, 1956, 1962 |
| BaeGI | GKGCMC | 3 cut(s) | 1653, 1770, 1813 |
| BalI | TGGCCA | 1 cut(s) | 849 |
| BamHI | GGATCC | 2 cut(s) | 683, 1578 |
| BanI | GGYRCC | 2 cut(s) | 127, 1765 |
| BanII | GRGCYC | 1 cut(s) | 1963 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 2418, 2450 |
| BauI | CACGAG | 1 cut(s) | 1734 |
| BbsI | GAAGAC | 3 cut(s) | 105, 618, 1029 |
| BbvI | GCAGC | 6 cut(s) | 657, 1134, 1448, 1630, 1828, 1831 |
| BccI | CCATC | 5 cut(s) | 16, 508, 635, 1435, 2381 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1676, 1710 |
| BciT130I | CCWGG | 2 cut(s) | 1261, 1327 |
| BciVI | GTATCC | 1 cut(s) | 1315 |
| BcnI | CCSGG | 2 cut(s) | 1957, 1958 |
| BcoDI | GTCTC | 5 cut(s) | 151, 1436, 1579, 1959, 2319 |
| BcuI | ACTAGT | 1 cut(s) | 292 |
| BfaI | CTAG | 9 cut(s) | 293, 1409, 1575, 1712, 1802, 1851, 2013, 2025, 2063 |
| BfmI | CTRYAG | 5 cut(s) | 402, 1644, 1742, 1814, 2259 |
| BfuAI | ACCTGC | 2 cut(s) | 1648, 2509 |
| BfuI | GTATCC | 1 cut(s) | 1315 |
| BglII | AGATCT | 1 cut(s) | 1366 |
| BisI | GCNGC | 7 cut(s) | 646, 1123, 1437, 1644, 1817, 1820, 2100 |
| BlsI | GCNGC | 7 cut(s) | 647, 1124, 1438, 1645, 1818, 1821, 2101 |
| Bme1390I | CCNGG | 4 cut(s) | 1261, 1327, 1957, 1958 |
| BmeT110I | CYCGRG | 3 cut(s) | 1611, 1956, 1962 |
| BmgT120I | GGNCC | 2 cut(s) | 257, 1424 |
| BmiI | GGNNCC | 5 cut(s) | 129, 685, 1580, 1767, 1954 |
| BmrFI | CCNGG | 4 cut(s) | 1261, 1327, 1957, 1958 |
| BmrI | ACTGGG | 1 cut(s) | 2437 |
| BmsI | GCATC | 3 cut(s) | 1562, 1613, 1684 |
| BmuI | ACTGGG | 1 cut(s) | 2437 |
| BpiI | GAAGAC | 3 cut(s) | 105, 618, 1029 |
| BpmI | CTGGAG | 3 cut(s) | 403, 1213, 1797 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1885 |
| Bpu14I | TTCGAA | 1 cut(s) | 2531 |
| BpuEI | CTTGAG | 3 cut(s) | 238, 683, 1647 |
| BpuMI | CCSGG | 2 cut(s) | 1957, 1958 |
| Bsa29I | ATCGAT | 1 cut(s) | 111 |
| BsaAI | YACGTR | 1 cut(s) | 1205 |
| BsaBI | GATNNNNATC | 2 cut(s) | 61, 1797 |
| BsaI | GGTCTC | 1 cut(s) | 1579 |
| BsaJI | CCNNGG | 6 cut(s) | 511, 939, 1259, 1548, 1956, 2416 |
| BsaWI | WCCGGW | 1 cut(s) | 393 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 2268, 2298, 2351, 2381 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 393, 1646, 1775, 2027, 2356, 2422 |
| Bse118I | RCCGGY | 1 cut(s) | 2219 |
| Bse1I | ACTGG | 4 cut(s) | 420, 843, 2008, 2443 |
| Bse3DI | GCAATG | 1 cut(s) | 1770 |
| Bse8I | GATNNNNATC | 2 cut(s) | 61, 1797 |
| BseAI | TCCGGA | 1 cut(s) | 393 |
| BseBI | CCWGG | 2 cut(s) | 1261, 1327 |
| BseCI | ATCGAT | 1 cut(s) | 111 |
| BseDI | CCNNGG | 6 cut(s) | 511, 939, 1259, 1548, 1956, 2416 |
| BseGI | GGATG | 3 cut(s) | 244, 949, 1544 |
| BseJI | GATNNNNATC | 2 cut(s) | 61, 1797 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 393, 1646, 1775, 2027, 2356, 2422 |
| BseMI | GCAATG | 1 cut(s) | 1770 |
| BseMII | CTCAG | 5 cut(s) | 1395, 1536, 1604, 1899, 2309 |
| BseNI | ACTGG | 4 cut(s) | 420, 843, 2008, 2443 |
| BseRI | GAGGAG | 1 cut(s) | 1841 |
| BseSI | GKGCMC | 3 cut(s) | 1653, 1770, 1813 |
| BseXI | GCAGC | 6 cut(s) | 657, 1134, 1448, 1630, 1828, 1831 |
| BseYI | CCCAGC | 1 cut(s) | 1421 |
| BshFI | GGCC | 4 cut(s) | 259, 849, 1413, 1426 |
| BshNI | GGYRCC | 2 cut(s) | 127, 1765 |
| BshVI | ATCGAT | 1 cut(s) | 111 |
| BsiHKCI | CYCGRG | 3 cut(s) | 1611, 1956, 1962 |
| BsiSI | CCGG | 5 cut(s) | 140, 394, 1414, 1957, 2220 |
| BslFI | GGGAC | 2 cut(s) | 763, 2139 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 393, 1646, 1775, 2027, 2356, 2422 |
| BsmAI | GTCTC | 5 cut(s) | 151, 1436, 1579, 1959, 2319 |
| BsmFI | GGGAC | 2 cut(s) | 763, 2139 |
| BsmI | GAATGC | 4 cut(s) | 663, 1502, 1897, 2137 |
| BsnI | GGCC | 4 cut(s) | 259, 849, 1413, 1426 |
| Bso31I | GGTCTC | 1 cut(s) | 1579 |
| BsoBI | CYCGRG | 3 cut(s) | 1611, 1956, 1962 |
| Bsp119I | TTCGAA | 1 cut(s) | 2531 |
| Bsp1286I | GDGCHC | 4 cut(s) | 1653, 1770, 1813, 1963 |
| Bsp13I | TCCGGA | 1 cut(s) | 393 |
| Bsp19I | CCATGG | 1 cut(s) | 2416 |
| BspACI | CCGC | 1 cut(s) | 2099 |
| BspANI | GGCC | 4 cut(s) | 259, 849, 1413, 1426 |
| BspCNI | CTCAG | 5 cut(s) | 1396, 1535, 1603, 1898, 2310 |
| BspDI | ATCGAT | 1 cut(s) | 111 |
| BspEI | TCCGGA | 1 cut(s) | 393 |
| BspHI | TCATGA | 2 cut(s) | 211, 424 |
| BspLI | GGNNCC | 5 cut(s) | 129, 685, 1580, 1767, 1954 |
| BspMAI | CTGCAG | 2 cut(s) | 1648, 1818 |
| BspMI | ACCTGC | 2 cut(s) | 1648, 2509 |
| BspPI | GGATC | 8 cut(s) | 678, 691, 767, 779, 1573, 1586, 2067, 2407 |
| BspQI | GCTCTTC | 1 cut(s) | 1507 |
| BspT104I | TTCGAA | 1 cut(s) | 2531 |
| BspT107I | GGYRCC | 2 cut(s) | 127, 1765 |
| BspTNI | GGTCTC | 1 cut(s) | 1579 |
| BsrDI | GCAATG | 1 cut(s) | 1770 |
| BsrFI | RCCGGY | 1 cut(s) | 2219 |
| BsrI | ACTGG | 4 cut(s) | 420, 843, 2008, 2443 |
| BssAI | RCCGGY | 1 cut(s) | 2219 |
| BssECI | CCNNGG | 6 cut(s) | 511, 939, 1259, 1548, 1956, 2416 |
| BssSI | CACGAG | 1 cut(s) | 1734 |
| BssT1I | CCWWGG | 3 cut(s) | 511, 939, 2416 |
| Bst2BI | CACGAG | 1 cut(s) | 1734 |
| Bst2UI | CCWGG | 2 cut(s) | 1261, 1327 |
| Bst4CI | ACNGT | 8 cut(s) | 332, 406, 912, 1447, 1865, 1986, 2263, 2367 |
| Bst6I | CTCTTC | 6 cut(s) | 24, 36, 496, 822, 1507, 1975 |
| BstBAI | YACGTR | 1 cut(s) | 1205 |
| BstBI | TTCGAA | 1 cut(s) | 2531 |
| BstC8I | GCNNGC | 7 cut(s) | 508, 1895, 2137, 2141, 2217, 2386, 2488 |
| BstDEI | CTNAG | 8 cut(s) | 317, 1404, 1522, 1590, 1885, 2305, 2318, 2551 |
| BstDSI | CCRYGG | 1 cut(s) | 2416 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1644 |
| BstF5I | GGATG | 3 cut(s) | 244, 949, 1544 |
| BstHHI | GCGC | 1 cut(s) | 2506 |
| BstMAI | GTCTC | 5 cut(s) | 151, 1436, 1579, 1959, 2319 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 1890, 2096 |
| BstNI | CCWGG | 2 cut(s) | 1261, 1327 |
| BstNSI | RCATGY | 3 cut(s) | 1400, 2143, 2219 |
| BstSCI | CCNGG | 4 cut(s) | 1259, 1325, 1955, 1956 |
| BstSFI | CTRYAG | 5 cut(s) | 402, 1644, 1742, 1814, 2259 |
| BstSLI | GKGCMC | 3 cut(s) | 1653, 1770, 1813 |
| BstV1I | GCAGC | 6 cut(s) | 657, 1134, 1448, 1630, 1828, 1831 |
| BstV2I | GAAGAC | 3 cut(s) | 105, 618, 1029 |
| BstX2I | RGATCY | 4 cut(s) | 683, 1366, 1578, 2059 |
| BstYI | RGATCY | 4 cut(s) | 683, 1366, 1578, 2059 |
| Bsu15I | ATCGAT | 1 cut(s) | 111 |
| BsuI | GTATCC | 1 cut(s) | 1315 |
| BsuRI | GGCC | 4 cut(s) | 259, 849, 1413, 1426 |
| BsuTUI | ATCGAT | 1 cut(s) | 111 |
| BtgI | CCRYGG | 1 cut(s) | 2416 |
| BtsCI | GGATG | 3 cut(s) | 244, 949, 1544 |
| BtsI | GCAGTG | 1 cut(s) | 1811 |
| BtsIMutI | CAGTG | 4 cut(s) | 411, 850, 1168, 1811 |
| BveI | ACCTGC | 2 cut(s) | 1648, 2509 |
| Cac8I | GCNNGC | 7 cut(s) | 508, 1895, 2137, 2141, 2217, 2386, 2488 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1915 |
| CciI | TCATGA | 2 cut(s) | 211, 424 |
| CfoI | GCGC | 1 cut(s) | 2506 |
| Cfr10I | RCCGGY | 1 cut(s) | 2219 |
| Cfr13I | GGNCC | 2 cut(s) | 257, 1424 |
| Cfr9I | CCCGGG | 1 cut(s) | 1956 |
| ClaI | ATCGAT | 1 cut(s) | 111 |
| Csp6I | GTAC | 7 cut(s) | 128, 441, 863, 1113, 2018, 2368, 2457 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 216, 251 |
| CviQI | GTAC | 7 cut(s) | 128, 441, 863, 1113, 2018, 2368, 2457 |
| DdeI | CTNAG | 8 cut(s) | 317, 1404, 1522, 1590, 1885, 2305, 2318, 2551 |
| DraI | TTTAAA | 2 cut(s) | 1566, 1839 |
| DraIII | CACNNNGTG | 1 cut(s) | 587 |
| EaeI | YGGCCR | 1 cut(s) | 847 |
| Eam1104I | CTCTTC | 6 cut(s) | 24, 36, 496, 822, 1507, 1975 |
| EarI | CTCTTC | 6 cut(s) | 24, 36, 496, 822, 1507, 1975 |
| Eco130I | CCWWGG | 3 cut(s) | 511, 939, 2416 |
| Eco24I | GRGCYC | 1 cut(s) | 1963 |
| Eco31I | GGTCTC | 1 cut(s) | 1579 |
| Eco57I | CTGAAG | 4 cut(s) | 66, 1041, 1371, 1374 |
| Eco88I | CYCGRG | 3 cut(s) | 1611, 1956, 1962 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1644 |
| EcoRII | CCWGG | 2 cut(s) | 1259, 1325 |
| EcoT14I | CCWWGG | 3 cut(s) | 511, 939, 2416 |
| EcoT38I | GRGCYC | 1 cut(s) | 1963 |
| ErhI | CCWWGG | 3 cut(s) | 511, 939, 2416 |
| FaqI | GGGAC | 2 cut(s) | 763, 2139 |
| FauNDI | CATATG | 1 cut(s) | 991 |
| FblI | GTMKAC | 1 cut(s) | 999 |
| Fnu4HI | GCNGC | 7 cut(s) | 646, 1123, 1437, 1644, 1817, 1820, 2100 |
| FokI | GGATG | 3 cut(s) | 251, 956, 1531 |
| FriOI | GRGCYC | 1 cut(s) | 1963 |
| Fsp4HI | GCNGC | 7 cut(s) | 646, 1123, 1437, 1644, 1817, 1820, 2100 |
| FspBI | CTAG | 9 cut(s) | 293, 1409, 1575, 1712, 1802, 1851, 2013, 2025, 2063 |
| GlaI | GCGC | 1 cut(s) | 2505 |
| GluI | GCNGC | 7 cut(s) | 646, 1123, 1437, 1644, 1817, 1820, 2100 |
| GsaI | CCCAGC | 1 cut(s) | 1425 |
| GsuI | CTGGAG | 3 cut(s) | 403, 1213, 1797 |
| HaeIII | GGCC | 4 cut(s) | 259, 849, 1413, 1426 |
| HapII | CCGG | 5 cut(s) | 140, 394, 1414, 1957, 2220 |
| HhaI | GCGC | 1 cut(s) | 2506 |
| Hin6I | GCGC | 1 cut(s) | 2504 |
| HinP1I | GCGC | 1 cut(s) | 2504 |
| HincII | GTYRAC | 1 cut(s) | 358 |
| HindII | GTYRAC | 1 cut(s) | 358 |
| HindIII | AAGCTT | 2 cut(s) | 1891, 2088 |
| HpaII | CCGG | 5 cut(s) | 140, 394, 1414, 1957, 2220 |
| HphI | GGTGA | 4 cut(s) | 599, 978, 1529, 1629 |
| Hpy166II | GTNNAC | 5 cut(s) | 358, 460, 986, 1000, 1739 |
| Hpy8I | GTNNAC | 5 cut(s) | 358, 460, 986, 1000, 1739 |
| HpyAV | CCTTC | 7 cut(s) | 33, 700, 842, 1346, 2058, 2423, 2550 |
| HpyCH4III | ACNGT | 8 cut(s) | 332, 406, 912, 1447, 1865, 1986, 2263, 2367 |
| HpyCH4IV | ACGT | 2 cut(s) | 301, 1204 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 1890, 2096 |
| HpyF3I | CTNAG | 8 cut(s) | 317, 1404, 1522, 1590, 1885, 2305, 2318, 2551 |
| HpySE526I | ACGT | 2 cut(s) | 301, 1204 |
| HspAI | GCGC | 1 cut(s) | 2504 |
| Kpn2I | TCCGGA | 1 cut(s) | 393 |
| KpnI | GGTACC | 1 cut(s) | 131 |
| LguI | GCTCTTC | 1 cut(s) | 1507 |
| LmnI | GCTCC | 1 cut(s) | 422 |
| Lsp1109I | GCAGC | 6 cut(s) | 657, 1134, 1448, 1630, 1828, 1831 |
| LweI | GCATC | 3 cut(s) | 1562, 1613, 1684 |
| MaeI | CTAG | 9 cut(s) | 293, 1409, 1575, 1712, 1802, 1851, 2013, 2025, 2063 |
| MaeII | ACGT | 2 cut(s) | 301, 1204 |
| MaeIII | GTNAC | 7 cut(s) | 344, 551, 826, 1007, 1517, 1635, 1859 |
| MflI | RGATCY | 4 cut(s) | 683, 1366, 1578, 2059 |
| MhlI | GDGCHC | 4 cut(s) | 1653, 1770, 1813, 1963 |
| MlsI | TGGCCA | 1 cut(s) | 849 |
| MluNI | TGGCCA | 1 cut(s) | 849 |
| MlyI | GAGTC | 6 cut(s) | 13, 964, 1339, 1514, 1961, 1987 |
| MmeI | TCCRAC | 3 cut(s) | 1258, 2076, 2521 |
| Mox20I | TGGCCA | 1 cut(s) | 849 |
| MroI | TCCGGA | 1 cut(s) | 393 |
| MroXI | GAANNNNTTC | 2 cut(s) | 1937, 2433 |
| MscI | TGGCCA | 1 cut(s) | 849 |
| MseI | TTAA | 8 cut(s) | 732, 1452, 1475, 1565, 1838, 2076, 2115, 2241 |
| MslI | CAYNNNNRTG | 2 cut(s) | 2214, 2220 |
| Msp20I | TGGCCA | 1 cut(s) | 849 |
| MspI | CCGG | 5 cut(s) | 140, 394, 1414, 1957, 2220 |
| MspR9I | CCNGG | 4 cut(s) | 1261, 1327, 1957, 1958 |
| Mva1269I | GAATGC | 4 cut(s) | 663, 1502, 1897, 2137 |
| MvaI | CCWGG | 2 cut(s) | 1261, 1327 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 1890, 2096 |
| NciI | CCSGG | 2 cut(s) | 1957, 1958 |
| NcoI | CCATGG | 1 cut(s) | 2416 |
| NdeI | CATATG | 1 cut(s) | 991 |
| NlaIV | GGNNCC | 5 cut(s) | 129, 685, 1580, 1767, 1954 |
| NmuCI | GTSAC | 4 cut(s) | 1007, 1517, 1635, 1859 |
| NspI | RCATGY | 3 cut(s) | 1400, 2143, 2219 |
| NspV | TTCGAA | 1 cut(s) | 2531 |
| PaeI | GCATGC | 2 cut(s) | 2143, 2219 |
| PaeR7I | CTCGAG | 2 cut(s) | 1611, 1962 |
| PagI | TCATGA | 2 cut(s) | 211, 424 |
| PaqCI | CACCTGC | 1 cut(s) | 1648 |
| PciSI | GCTCTTC | 1 cut(s) | 1507 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 2143 |
| PctI | GAATGC | 4 cut(s) | 663, 1502, 1897, 2137 |
| PdmI | GAANNNNTTC | 2 cut(s) | 1937, 2433 |
| PfeI | GAWTC | 8 cut(s) | 62, 176, 480, 590, 974, 1158, 1922, 2533 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 2356 |
| PkrI | GCNGC | 7 cut(s) | 647, 1124, 1438, 1645, 1818, 1821, 2101 |
| PleI | GAGTC | 6 cut(s) | 12, 963, 1338, 1514, 1961, 1987 |
| PpsI | GAGTC | 6 cut(s) | 12, 963, 1338, 1514, 1961, 1987 |
| Ppu21I | YACGTR | 1 cut(s) | 1205 |
| PshBI | ATTAAT | 1 cut(s) | 2241 |
| Psp6I | CCWGG | 2 cut(s) | 1259, 1325 |
| PspFI | CCCAGC | 1 cut(s) | 1421 |
| PspGI | CCWGG | 2 cut(s) | 1259, 1325 |
| PspN4I | GGNNCC | 5 cut(s) | 129, 685, 1580, 1767, 1954 |
| PspPI | GGNCC | 2 cut(s) | 257, 1424 |
| PspXI | VCTCGAGB | 1 cut(s) | 1611 |
| PstI | CTGCAG | 2 cut(s) | 1648, 1818 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1915 |
| PsuI | RGATCY | 4 cut(s) | 683, 1366, 1578, 2059 |
| RsaI | GTAC | 7 cut(s) | 129, 442, 864, 1114, 2019, 2369, 2458 |
| RsaNI | GTAC | 7 cut(s) | 128, 441, 863, 1113, 2018, 2368, 2457 |
| RseI | CAYNNNNRTG | 2 cut(s) | 2214, 2220 |
| SapI | GCTCTTC | 1 cut(s) | 1507 |
| SaqAI | TTAA | 8 cut(s) | 732, 1452, 1475, 1565, 1838, 2076, 2115, 2241 |
| SatI | GCNGC | 7 cut(s) | 646, 1123, 1437, 1644, 1817, 1820, 2100 |
| Sau96I | GGNCC | 2 cut(s) | 257, 1424 |
| SchI | GAGTC | 6 cut(s) | 13, 964, 1339, 1514, 1961, 1987 |
| ScrFI | CCNGG | 4 cut(s) | 1261, 1327, 1957, 1958 |
| SduI | GDGCHC | 4 cut(s) | 1653, 1770, 1813, 1963 |
| SfaNI | GCATC | 3 cut(s) | 1562, 1613, 1684 |
| SfcI | CTRYAG | 5 cut(s) | 402, 1644, 1742, 1814, 2259 |
| Sfr274I | CTCGAG | 2 cut(s) | 1611, 1962 |
| SfuI | TTCGAA | 1 cut(s) | 2531 |
| SlaI | CTCGAG | 2 cut(s) | 1611, 1962 |
| SmaI | CCCGGG | 1 cut(s) | 1958 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 2214, 2220 |
| SmlI | CTYRAG | 5 cut(s) | 217, 698, 1611, 1662, 1962 |
| SmoI | CTYRAG | 5 cut(s) | 217, 698, 1611, 1662, 1962 |
| SpeI | ACTAGT | 1 cut(s) | 292 |
| SphI | GCATGC | 2 cut(s) | 2143, 2219 |
| SsiI | CCGC | 1 cut(s) | 2099 |
| SspMI | CTAG | 9 cut(s) | 293, 1409, 1575, 1712, 1802, 1851, 2013, 2025, 2063 |
| StyD4I | CCNGG | 4 cut(s) | 1259, 1325, 1955, 1956 |
| StyI | CCWWGG | 3 cut(s) | 511, 939, 2416 |
| TaaI | ACNGT | 8 cut(s) | 332, 406, 912, 1447, 1865, 1986, 2263, 2367 |
| TaiI | ACGT | 2 cut(s) | 304, 1207 |
| TaqI | TCGA | 8 cut(s) | 111, 155, 1333, 1612, 1963, 2146, 2297, 2531 |
| TauI | GCSGC | 1 cut(s) | 2102 |
| TfiI | GAWTC | 8 cut(s) | 62, 176, 480, 590, 974, 1158, 1922, 2533 |
| Tru1I | TTAA | 8 cut(s) | 732, 1452, 1475, 1565, 1838, 2076, 2115, 2241 |
| Tru9I | TTAA | 8 cut(s) | 732, 1452, 1475, 1565, 1838, 2076, 2115, 2241 |
| TscAI | CASTG | 4 cut(s) | 411, 850, 1168, 1818 |
| TseFI | GTSAC | 4 cut(s) | 1007, 1517, 1635, 1859 |
| TseI | GCWGC | 6 cut(s) | 645, 1122, 1436, 1643, 1816, 1819 |
| Tsp45I | GTSAC | 4 cut(s) | 1007, 1517, 1635, 1859 |
| TspGWI | ACGGA | 3 cut(s) | 765, 880, 1287 |
| TspMI | CCCGGG | 1 cut(s) | 1956 |
| TspRI | CASTG | 4 cut(s) | 411, 850, 1168, 1818 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 2356 |
| VspI | ATTAAT | 1 cut(s) | 2241 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1644 |
| XbaI | TCTAGA | 3 cut(s) | 1850, 2012, 2062 |
| XceI | RCATGY | 3 cut(s) | 1400, 2143, 2219 |
| XhoI | CTCGAG | 2 cut(s) | 1611, 1962 |
| XmaI | CCCGGG | 1 cut(s) | 1956 |
| XmiI | GTMKAC | 1 cut(s) | 999 |
| XmnI | GAANNNNTTC | 2 cut(s) | 1937, 2433 |
| XspI | CTAG | 9 cut(s) | 293, 1409, 1575, 1712, 1802, 1851, 2013, 2025, 2063 |