Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0003873

Physical Location & Seq

Genomic Coordinates Forward (+)

343325 .. 352419

Gene Structure 9095 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G003200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2373 bp

ATGGAGGACATGGACATCGATCAGGTAGTGGATGTACCTGACACACCTGATAGATTGGCTTCCAGACACATTACTGGCAGGGAATCTGTTGGTAAAGTCTGTAATTCACCATTAGCTTGTGACTTGAGTAATCCAGATGTTGTGGATGAAAACTATGTGAATGGACTGAAGGTCAGGGGAAGGTTCGTCAGTGAAAATGGGCATAATAGAAGAATTGTTATACATCCTCCGACAAATCTTAGCAATCTTGATATTAAGAGTTGCAGCAACTCAAATGTTGATAATTCATCTGCTTCCCATAATGCTCACATCTTTCGGAGAGCAACAGTGGGCAAAAGCTCCAGTCGTGAAGCCAAATATTCTACTGGAATTGAAAATATGGACGAAGGAAAGGCTATGACCATCAAAGTTCCTTCTAAATCATCTGCTTGCCATGAAAATGCTAAATTTTTTGATTTAACCAAACACAATGGTCACACCCAATTAACGAAAAAGGTTTTTCCACATGTTGAATTGGAAGATAATGTTGCTGAAGACAAAAGAAAAGGGCAAGTTGCGTTAATTGGCAGTTCTTCTGTAGATTGCATTTCAAGTCATGCGGAGAGATCCAGAAATGCTCCCAAGGGGAAAGAAAAAATAGATGGTAGTACAAAGGGTTTTGGGTTAGCTGTGGCTCTTGACAAGGGGGTTGGTCTGTCCATTGATCCTGAACATAAAATGGGGCAACAAATGCCCGTTCCTCTTCATTCTGTTATGCAGCCAAGAGTCAGTGGCCAAAAAAGGTTGGTACGAAATGGGTGTATTTCCCCCCATAATATAGCAACAAGGACTAAACAGTTAGCTGAACAGCGTAGCAATAGTTCCAAGGATATTGAACAAAGTCACACAGGGAATGCAGATTCCAATGGTTCACCATATGTCATAGACATAAATGACATAGTTACTGAAGGCAATAATAGTGAAAGACTGAAAGGGAAGGGGAAAGGTGTAATAATTCATTCTCCTACACCTAAGGCAAATAATGCAAGAATTATTCGTACATCAGGCAGCGGTCTTGTGAATAATAATAAAGAAGCTAATGGAATAAGGGATGTCAGTAGCAATATTTCTGGACGCTCTGAAGGACTAGGTGGCTGGAGAACCACACGTAATCGTTCAAGTCAAATAGATTATTTCTTGCCTGATTCCACTGAGCCTCTTCCCAGGAGAACTAATGGTGTTGGGAACTTTGTCAATCAACATCAAAACAGAGTACAGAGGAGAGATACCAGGAGTCGAGGAAATCGAAGGACTGAAGATGATGTGGCAGAAGAACTGAATGCAACTCAAAAAGCTTCTGGACTTGTGTCTGAGCTGGACCGGATACCTGGGTCATGTCATGCAGCAAAGACAGTTACTAAAAGGCAGAGGAAACAGGGATTAAGTTTGGGAAATCATGCTGAATGCTCTACCTCGGTGTCCGGGGACTCAGATATTGCTTTTCTTGGTTCATCTGAAAATTCAAAATCATCTAGGATCCAGAGACCTCAATTTCAGGGAAGGTCAAGTCGAGTTATTGAGGTTGATGACTTATCACCTGCTGCAGGGCACTCTGTGCCCCAAGGTTTTGATTCCATGAATGATGATTCCAATGCTAGGGCAAGACAACTAGAAGCAGATGAGATATTGGCTCGTGAACTCCAGGAGCAATTATATCATGAGGTGCCTATCAGTGGAGGTGGCGAGCAGATTGATGAACATCTGGCGTGGGCACTGCAGCAGGAGGAGAATGCTTCAAATACTTCTAGAGGAAGTCACAATTTATCACATCGTAGAGGCTCAACAATCTTGCATTCGAATAGACAATCGCGGCCAGAGTCTTTTCAAAACCATTCCAATAGGAGAGGAACCCAGGCTCGAGTTGCTACCTCGTCTAGAATGGCACAGTTGAGGACTCGCTTTCGCAACCAGTCTCCTAGAGTATCAACTAGAGGAAGAAATATGCGATTTCCTTTGGACATGGATCTAGACATGAGACTTAATATATTAGAAGCTATCGAGGCAGCATTTGATGACCTTGGTGAGGTGGGACTGGATAATCGCATGCTTCGAGTTCAGAGGGATTTTAATGACAATGACTATGAGATGTTGTTGGCACTTGATGATAATAATCATCAGCATGCTGGTGCAACAGTTCATCAAATTAATAATTTGCCACAATCTACGGTACAGAGTGATGCCTCAGAAGAAGCCTGTGCAATTTGTCTTGAAACTCCAACAATTGGAGAAACAGTTCGCCATCTTCCTTGCTTGCACAGATTTCACAAAGATTGCATTGATCCATGGCTCGGTAGAAGAACTTCGTGCCCAATTTGTAAGTGTTCGATCACGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

zf-RING_2

Protein Analysis

791

Amino Acids

87.12

Weight (kDa)

8.42

Isoelectric Point (pI)

54.46

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003873)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G04790
fragaria_vesca	FvH4_4g00300 FvH4_4g00300 FvH4_4g00300 FvH4_4g00300 FvH4_4g00300 FvH4_4g00300 FvH4_4g00300 FvH4_4g00300 FvH4_4g00300 FvH4_4g00300 FvH4_4g00300 FvH4_4g00300 FvH4_4g00300
malus_domestica	MD04G1003700.v1.1
prunus_persica	Prupe.1G003200_v2.0.a1 Prupe.1G003200_v2.0.a1 Prupe.1G003200_v2.0.a1 Prupe.1G003200_v2.0.a1 Prupe.1G003200_v2.0.a1
pyrus_communis	pycom04g00380
rosa_chinensis	RchiOBHm_Chr4g0385131
rosa_laevigata	RLG00000010255
rosa_multiflora	Rmu_co8075098.1_g000001 Rmu_sc0003086.1_g000006 Rmu_sc0008734.1_g000019
rosa_roxburghii	Rroxscaffold_5G00333050
rosa_rugosa	Rorug03G0299700 Rorug03G0299800
rosa_samantha	Rh4AG003000 Rh4BG002400 Rh4CG003200 Rh4DG002700
rosa_wichuraiana	Rw4G000630

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1585
Acc36I	ACCTGC	1 cut(s)	1585
AccB1I	GGYRCC	1 cut(s)	1702
AccB7I	CCANNNNNTGG	1 cut(s)	2261
AccII	CGCG	1 cut(s)	1849
AciI	CCGC	3 cut(s)	599, 1050, 1849
AclWI	GGATC	6 cut(s)	600, 698, 1510, 1523, 2010, 2312
AcoI	YGGCCR	2 cut(s)	772, 1850
AcsI	RAATTY	2 cut(s)	446, 1498
AcuI	CTGAAG	5 cut(s)	188, 552, 966, 1140, 1314
AdeI	CACNNNGTG	1 cut(s)	1594
AfaI	GTAC	6 cut(s)	36, 649, 789, 1039, 1254, 2208
AfiI	CCNNNNNNNGG	6 cut(s)	1583, 1635, 1712, 2062, 2261, 2327
AflIII	ACRYGT	2 cut(s)	505, 1145
AgsI	TTSAA	9 cut(s)	374, 512, 591, 875, 1158, 1503, 1776, 1865, 2249
AhdI	GACNNNNNGTC	1 cut(s)	170
AjnI	CCWGG	5 cut(s)	1202, 1268, 1366, 1680, 1890
AloI	GAACNNNNNNTCC	2 cut(s)	2256, 2288
AluBI	AGCT	8 cut(s)	116, 339, 668, 842, 1076, 1334, 1354, 2033
AluI	AGCT	8 cut(s)	116, 339, 668, 842, 1076, 1334, 1354, 2033
Alw26I	GTCTC	3 cut(s)	1516, 1956, 2008
AlwI	GGATC	6 cut(s)	600, 698, 1510, 1523, 2010, 2312
Ama87I	CYCGRG	1 cut(s)	1896
AoxI	GGCC	2 cut(s)	772, 1850
ApeKI	GCWGC	7 cut(s)	264, 757, 1047, 1382, 1580, 1756, 2042
ApoI	RAATTY	2 cut(s)	446, 1498
AseI	ATTAAT	1 cut(s)	2184
Asp700I	GAANNNNTTC	2 cut(s)	2271, 2338
AspS9I	GGNCC	1 cut(s)	1357
AsuC2I	CCSGG	1 cut(s)	1462
AsuHPI	GGTGA	4 cut(s)	99, 903, 1566, 2072
AsuII	TTCGAA	1 cut(s)	1835
AvaI	CYCGRG	1 cut(s)	1896
AvaII	GGWCC	1 cut(s)	1357
AxyI	CCTNAGG	1 cut(s)	1011
BaeGI	GKGCMC	4 cut(s)	1590, 1599, 1753, 2348
BaeI	ACNNNNGTAYC	2 cut(s)	1355, 1388
BalI	TGGCCA	1 cut(s)	774
BamHI	GGATCC	1 cut(s)	1515
BanI	GGYRCC	1 cut(s)	1702
BarI	GAAGNNNNNNTAC	2 cut(s)	2323, 2355
BauI	CACGAG	1 cut(s)	1671
BbsI	GAAGAC	1 cut(s)	540
BbvI	GCAGC	7 cut(s)	276, 769, 1059, 1394, 1567, 1768, 2054
BccI	CCATC	3 cut(s)	410, 635, 2286
BciT130I	CCWGG	5 cut(s)	1204, 1270, 1368, 1682, 1892
BciVI	GTATCC	1 cut(s)	1356
BcnI	CCSGG	1 cut(s)	1462
BcoDI	GTCTC	3 cut(s)	1516, 1956, 2008
BfaI	CTAG	9 cut(s)	1127, 1512, 1635, 1649, 1785, 1914, 1956, 1968, 2006
BfmI	CTRYAG	3 cut(s)	576, 1581, 1754
BfuAI	ACCTGC	1 cut(s)	1585
BfuI	GTATCC	1 cut(s)	1356
BisI	GCNGC	8 cut(s)	265, 758, 1048, 1383, 1581, 1757, 1850, 2043
BlsI	GCNGC	8 cut(s)	266, 759, 1049, 1384, 1582, 1758, 1851, 2044
Bme1390I	CCNGG	6 cut(s)	1204, 1270, 1368, 1462, 1682, 1892
Bme18I	GGWCC	1 cut(s)	1357
BmeRI	GACNNNNNGTC	1 cut(s)	170
BmeT110I	CYCGRG	1 cut(s)	1896
BmgT120I	GGNCC	1 cut(s)	1357
BmiI	GGNNCC	3 cut(s)	1517, 1704, 1888
BmrFI	CCNGG	6 cut(s)	1204, 1270, 1368, 1462, 1682, 1892
BmsI	GCATC	1 cut(s)	2206
BoxI	GACNNNNGTC	1 cut(s)	1345
BpiI	GAAGAC	1 cut(s)	540
BpmI	CTGGAG	3 cut(s)	325, 1156, 1664
Bpu14I	TTCGAA	1 cut(s)	1835
BpuEI	CTTGAG	1 cut(s)	145
BpuMI	CCSGG	1 cut(s)	1462
Bsa29I	ATCGAT	1 cut(s)	18
BsaAI	YACGTR	2 cut(s)	1148, 2370
BsaBI	GATNNNNATC	2 cut(s)	1737, 2148
BsaI	GGTCTC	1 cut(s)	1516
BsaWI	WCCGGW	1 cut(s)	1359
BsaXI	ACNNNNNCTCC	2 cut(s)	2256, 2286
Bsc4I	CCNNNNNNNGG	6 cut(s)	1583, 1635, 1712, 2062, 2261, 2327
Bse1I	ACTGG	5 cut(s)	79, 342, 370, 1948, 2076
Bse21I	CCTNAGG	1 cut(s)	1011
Bse8I	GATNNNNATC	2 cut(s)	1737, 2148
BseBI	CCWGG	5 cut(s)	1204, 1270, 1368, 1682, 1892
BseCI	ATCGAT	1 cut(s)	18
BseGI	GGATG	4 cut(s)	37, 151, 223, 1096
BseJI	GATNNNNATC	2 cut(s)	1737, 2148
BseLI	CCNNNNNNNGG	6 cut(s)	1583, 1635, 1712, 2062, 2261, 2327
BseMII	CTCAG	4 cut(s)	1182, 1341, 1482, 2235
BseNI	ACTGG	5 cut(s)	79, 342, 370, 1948, 2076
BseRI	GAGGAG	2 cut(s)	1273, 1778
BseSI	GKGCMC	4 cut(s)	1590, 1599, 1753, 2348
BseXI	GCAGC	7 cut(s)	276, 769, 1059, 1394, 1567, 1768, 2054
Bsh1236I	CGCG	1 cut(s)	1849
BshFI	GGCC	2 cut(s)	774, 1852
BshNI	GGYRCC	1 cut(s)	1702
BshVI	ATCGAT	1 cut(s)	18
BsiHKCI	CYCGRG	1 cut(s)	1896
BsiSI	CCGG	2 cut(s)	1360, 1461
BslFI	GGGAC	2 cut(s)	1478, 2082
BslI	CCNNNNNNNGG	6 cut(s)	1583, 1635, 1712, 2062, 2261, 2327
BsmAI	GTCTC	3 cut(s)	1516, 1956, 2008
BsmFI	GGGAC	2 cut(s)	1478, 2082
BsmI	GAATGC	5 cut(s)	898, 1324, 1448, 1774, 1831
BsnI	GGCC	2 cut(s)	774, 1852
Bso31I	GGTCTC	1 cut(s)	1516
BsoBI	CYCGRG	1 cut(s)	1896
Bsp119I	TTCGAA	1 cut(s)	1835
Bsp1286I	GDGCHC	4 cut(s)	1590, 1599, 1753, 2348
Bsp143I	GATC	7 cut(s)	19, 605, 703, 1515, 2002, 2317, 2364
Bsp19I	CCATGG	1 cut(s)	2321
BspACI	CCGC	3 cut(s)	599, 1050, 1849
BspANI	GGCC	2 cut(s)	774, 1852
BspCNI	CTCAG	4 cut(s)	1183, 1342, 1481, 2234
BspDI	ATCGAT	1 cut(s)	18
BspFNI	CGCG	1 cut(s)	1849
BspHI	TCATGA	1 cut(s)	1696
BspLI	GGNNCC	3 cut(s)	1517, 1704, 1888
BspMAI	CTGCAG	2 cut(s)	1585, 1758
BspMI	ACCTGC	1 cut(s)	1585
BspPI	GGATC	6 cut(s)	600, 698, 1510, 1523, 2010, 2312
BspT104I	TTCGAA	1 cut(s)	1835
BspT107I	GGYRCC	1 cut(s)	1702
BspTNI	GGTCTC	1 cut(s)	1516
BsrI	ACTGG	5 cut(s)	79, 342, 370, 1948, 2076
BssMI	GATC	7 cut(s)	19, 605, 703, 1515, 2002, 2317, 2364
BssSI	CACGAG	1 cut(s)	1671
BssT1I	CCWWGG	5 cut(s)	621, 864, 1600, 2056, 2321
Bst2BI	CACGAG	1 cut(s)	1671
Bst2UI	CCWGG	5 cut(s)	1204, 1270, 1368, 1682, 1892
Bst4CI	ACNGT	7 cut(s)	328, 837, 1393, 1926, 2173, 2206, 2272
Bst6I	CTCTTC	2 cut(s)	747, 1203
BstAPI	GCANNNNNTGC	3 cut(s)	730, 1022, 1594
BstBAI	YACGTR	2 cut(s)	1148, 2370
BstBI	TTCGAA	1 cut(s)	1835
BstC8I	GCNNGC	5 cut(s)	430, 1724, 2084, 2160, 2291
BstDEI	CTNAG	6 cut(s)	239, 1011, 1191, 1350, 1468, 2221
BstDSI	CCRYGG	1 cut(s)	2321
BstENI	CCTNNNNNAGG	2 cut(s)	1581, 2060
BstF5I	GGATG	4 cut(s)	37, 151, 223, 1096
BstFNI	CGCG	1 cut(s)	1849
BstKTI	GATC	7 cut(s)	22, 608, 706, 1518, 2005, 2320, 2367
BstMAI	GTCTC	3 cut(s)	1516, 1956, 2008
BstMBI	GATC	7 cut(s)	19, 605, 703, 1515, 2002, 2317, 2364
BstMWI	GCNNNNNNNGC	5 cut(s)	730, 1022, 1594, 1901, 2039
BstNI	CCWGG	5 cut(s)	1204, 1270, 1368, 1682, 1892
BstNSI	RCATGY	3 cut(s)	509, 2086, 2162
BstPAI	GACNNNNGTC	1 cut(s)	1345
BstSCI	CCNGG	6 cut(s)	1202, 1268, 1366, 1460, 1680, 1890
BstSFI	CTRYAG	3 cut(s)	576, 1581, 1754
BstSLI	GKGCMC	4 cut(s)	1590, 1599, 1753, 2348
BstUI	CGCG	1 cut(s)	1849
BstV1I	GCAGC	7 cut(s)	276, 769, 1059, 1394, 1567, 1768, 2054
BstV2I	GAAGAC	1 cut(s)	540
BstX2I	RGATCY	3 cut(s)	605, 1515, 2002
BstYI	RGATCY	3 cut(s)	605, 1515, 2002
Bsu15I	ATCGAT	1 cut(s)	18
Bsu36I	CCTNAGG	1 cut(s)	1011
BsuI	GTATCC	1 cut(s)	1356
BsuRI	GGCC	2 cut(s)	774, 1852
BsuTUI	ATCGAT	1 cut(s)	18
BtgI	CCRYGG	1 cut(s)	2321
BtsCI	GGATG	4 cut(s)	37, 151, 223, 1096
BtsI	GCAGTG	1 cut(s)	1751
BtsIMutI	CAGTG	6 cut(s)	196, 333, 775, 1188, 1717, 1751
BveI	ACCTGC	1 cut(s)	1585
Cac8I	GCNNGC	5 cut(s)	430, 1724, 2084, 2160, 2291
CciI	TCATGA	1 cut(s)	1696
Cfr13I	GGNCC	1 cut(s)	1357
ClaI	ATCGAT	1 cut(s)	18
CseI	GACGC	1 cut(s)	1122
Csp6I	GTAC	6 cut(s)	35, 648, 788, 1038, 1253, 2207
CviQI	GTAC	6 cut(s)	35, 648, 788, 1038, 1253, 2207
DdeI	CTNAG	6 cut(s)	239, 1011, 1191, 1350, 1468, 2221
DpnI	GATC	7 cut(s)	21, 607, 705, 1517, 2004, 2319, 2366
DpnII	GATC	7 cut(s)	19, 605, 703, 1515, 2002, 2317, 2364
DraIII	CACNNNGTG	1 cut(s)	1594
DriI	GACNNNNNGTC	1 cut(s)	170
EaeI	YGGCCR	2 cut(s)	772, 1850
Eam1104I	CTCTTC	2 cut(s)	747, 1203
Eam1105I	GACNNNNNGTC	1 cut(s)	170
EarI	CTCTTC	2 cut(s)	747, 1203
Eco130I	CCWWGG	5 cut(s)	621, 864, 1600, 2056, 2321
Eco31I	GGTCTC	1 cut(s)	1516
Eco47I	GGWCC	1 cut(s)	1357
Eco57I	CTGAAG	5 cut(s)	188, 552, 966, 1140, 1314
Eco81I	CCTNAGG	1 cut(s)	1011
Eco88I	CYCGRG	1 cut(s)	1896
EcoNI	CCTNNNNNAGG	2 cut(s)	1581, 2060
EcoRII	CCWGG	5 cut(s)	1202, 1268, 1366, 1680, 1890
EcoT14I	CCWWGG	5 cut(s)	621, 864, 1600, 2056, 2321
ErhI	CCWWGG	5 cut(s)	621, 864, 1600, 2056, 2321
FaqI	GGGAC	2 cut(s)	1478, 2082
FauNDI	CATATG	1 cut(s)	916
Fnu4HI	GCNGC	8 cut(s)	265, 758, 1048, 1383, 1581, 1757, 1850, 2043
FokI	GGATG	4 cut(s)	44, 158, 210, 1103
Fsp4HI	GCNGC	8 cut(s)	265, 758, 1048, 1383, 1581, 1757, 1850, 2043
FspBI	CTAG	9 cut(s)	1127, 1512, 1635, 1649, 1785, 1914, 1956, 1968, 2006
GluI	GCNGC	8 cut(s)	265, 758, 1048, 1383, 1581, 1757, 1850, 2043
GsuI	CTGGAG	3 cut(s)	325, 1156, 1664
HaeIII	GGCC	2 cut(s)	774, 1852
HapII	CCGG	2 cut(s)	1360, 1461
HgaI	GACGC	1 cut(s)	1122
HindIII	AAGCTT	1 cut(s)	1332
HpaII	CCGG	2 cut(s)	1360, 1461
HphI	GGTGA	4 cut(s)	99, 903, 1566, 2072
Hpy166II	GTNNAC	2 cut(s)	911, 1676
Hpy188I	TCNGA	8 cut(s)	231, 318, 1120, 1351, 1471, 1495, 2097, 2224
Hpy8I	GTNNAC	2 cut(s)	911, 1676
HpyAV	CCTTC	9 cut(s)	163, 174, 380, 423, 941, 970, 1115, 1281, 1533
HpyCH4III	ACNGT	7 cut(s)	328, 837, 1393, 1926, 2173, 2206, 2272
HpyCH4IV	ACGT	2 cut(s)	1147, 2369
HpyF10VI	GCNNNNNNNGC	5 cut(s)	730, 1022, 1594, 1901, 2039
HpyF3I	CTNAG	6 cut(s)	239, 1011, 1191, 1350, 1468, 2221
HpySE526I	ACGT	2 cut(s)	1147, 2369
Kzo9I	GATC	7 cut(s)	19, 605, 703, 1515, 2002, 2317, 2364
LmnI	GCTCC	3 cut(s)	344, 622, 1684
Lsp1109I	GCAGC	7 cut(s)	276, 769, 1059, 1394, 1567, 1768, 2054
LweI	GCATC	1 cut(s)	2206
MaeI	CTAG	9 cut(s)	1127, 1512, 1635, 1649, 1785, 1914, 1956, 1968, 2006
MaeII	ACGT	2 cut(s)	1147, 2369
MaeIII	GTNAC	6 cut(s)	119, 473, 881, 940, 1393, 1793
MalI	GATC	7 cut(s)	21, 607, 705, 1517, 2004, 2319, 2366
MboI	GATC	7 cut(s)	19, 605, 703, 1515, 2002, 2317, 2364
MfeI	CAATTG	1 cut(s)	2259
MflI	RGATCY	3 cut(s)	605, 1515, 2002
MhlI	GDGCHC	4 cut(s)	1590, 1599, 1753, 2348
MlsI	TGGCCA	1 cut(s)	774
MluNI	TGGCCA	1 cut(s)	774
MlyI	GAGTC	5 cut(s)	774, 1282, 1460, 1865, 1927
MmeI	TCCRAC	2 cut(s)	254, 2279
Mox20I	TGGCCA	1 cut(s)	774
MroXI	GAANNNNTTC	2 cut(s)	2271, 2338
MscI	TGGCCA	1 cut(s)	774
MseI	TTAA	8 cut(s)	255, 458, 485, 560, 1421, 2019, 2106, 2184
MslI	CAYNNNNRTG	3 cut(s)	438, 2157, 2163
Msp20I	TGGCCA	1 cut(s)	774
MspA1I	CMGCKG	1 cut(s)	1050
MspI	CCGG	2 cut(s)	1360, 1461
MspR9I	CCNGG	6 cut(s)	1204, 1270, 1368, 1462, 1682, 1892
MunI	CAATTG	1 cut(s)	2259
Mva1269I	GAATGC	5 cut(s)	898, 1324, 1448, 1774, 1831
MvaI	CCWGG	5 cut(s)	1204, 1270, 1368, 1682, 1892
MvnI	CGCG	1 cut(s)	1849
MwoI	GCNNNNNNNGC	5 cut(s)	730, 1022, 1594, 1901, 2039
NciI	CCSGG	1 cut(s)	1462
NcoI	CCATGG	1 cut(s)	2321
NdeI	CATATG	1 cut(s)	916
NdeII	GATC	7 cut(s)	19, 605, 703, 1515, 2002, 2317, 2364
NlaIV	GGNNCC	3 cut(s)	1517, 1704, 1888
NmuCI	GTSAC	4 cut(s)	119, 473, 881, 1793
NspI	RCATGY	3 cut(s)	509, 2086, 2162
NspV	TTCGAA	1 cut(s)	1835
PaeI	GCATGC	2 cut(s)	2086, 2162
PaeR7I	CTCGAG	1 cut(s)	1896
PagI	TCATGA	1 cut(s)	1696
PaqCI	CACCTGC	1 cut(s)	1585
PciI	ACATGT	1 cut(s)	505
PcsI	WCGNNNNNNNCGW	2 cut(s)	1282, 2086
PctI	GAATGC	5 cut(s)	898, 1324, 1448, 1774, 1831
PdmI	GAANNNNTTC	2 cut(s)	2271, 2338
PfeI	GAWTC	5 cut(s)	83, 899, 1184, 1610, 1625
PflMI	CCANNNNNTGG	1 cut(s)	2261
PfoI	TCCNGGA	1 cut(s)	1680
PkrI	GCNGC	8 cut(s)	266, 759, 1049, 1384, 1582, 1758, 1851, 2044
PleI	GAGTC	5 cut(s)	773, 1281, 1460, 1864, 1927
PpsI	GAGTC	5 cut(s)	773, 1281, 1460, 1864, 1927
Ppu21I	YACGTR	2 cut(s)	1148, 2370
PscI	ACATGT	1 cut(s)	505
PshAI	GACNNNNGTC	1 cut(s)	1345
PshBI	ATTAAT	1 cut(s)	2184
Psp6I	CCWGG	5 cut(s)	1202, 1268, 1366, 1680, 1890
PspGI	CCWGG	5 cut(s)	1202, 1268, 1366, 1680, 1890
PspN4I	GGNNCC	3 cut(s)	1517, 1704, 1888
PspPI	GGNCC	1 cut(s)	1357
PspXI	VCTCGAGB	1 cut(s)	1896
PsrI	GAACNNNNNNTAC	2 cut(s)	844, 876
PstI	CTGCAG	2 cut(s)	1585, 1758
PsuI	RGATCY	3 cut(s)	605, 1515, 2002
RsaI	GTAC	6 cut(s)	36, 649, 789, 1039, 1254, 2208
RsaNI	GTAC	6 cut(s)	35, 648, 788, 1038, 1253, 2207
RseI	CAYNNNNRTG	3 cut(s)	438, 2157, 2163
SaqAI	TTAA	8 cut(s)	255, 458, 485, 560, 1421, 2019, 2106, 2184
SatI	GCNGC	8 cut(s)	265, 758, 1048, 1383, 1581, 1757, 1850, 2043
Sau3AI	GATC	7 cut(s)	19, 605, 703, 1515, 2002, 2317, 2364
Sau96I	GGNCC	1 cut(s)	1357
SchI	GAGTC	5 cut(s)	774, 1282, 1460, 1865, 1927
ScrFI	CCNGG	6 cut(s)	1204, 1270, 1368, 1462, 1682, 1892
SduI	GDGCHC	4 cut(s)	1590, 1599, 1753, 2348
SfaNI	GCATC	1 cut(s)	2206
SfcI	CTRYAG	3 cut(s)	576, 1581, 1754
Sfr274I	CTCGAG	1 cut(s)	1896
SfuI	TTCGAA	1 cut(s)	1835
SinI	GGWCC	1 cut(s)	1357
SlaI	CTCGAG	1 cut(s)	1896
SmiMI	CAYNNNNRTG	3 cut(s)	438, 2157, 2163
SmlI	CTYRAG	2 cut(s)	124, 1896
SmoI	CTYRAG	2 cut(s)	124, 1896
SphI	GCATGC	2 cut(s)	2086, 2162
SsiI	CCGC	3 cut(s)	599, 1050, 1849
SspI	AATATT	2 cut(s)	359, 1105
SspMI	CTAG	9 cut(s)	1127, 1512, 1635, 1649, 1785, 1914, 1956, 1968, 2006
StyD4I	CCNGG	6 cut(s)	1202, 1268, 1366, 1460, 1680, 1890
StyI	CCWWGG	5 cut(s)	621, 864, 1600, 2056, 2321
TaaI	ACNGT	7 cut(s)	328, 837, 1393, 1926, 2173, 2206, 2272
TaiI	ACGT	2 cut(s)	1150, 2372
TaqI	TCGA	9 cut(s)	18, 1276, 1285, 1549, 1835, 1897, 2037, 2089, 2363
TatI	WGTACW	2 cut(s)	647, 1252
TauI	GCSGC	1 cut(s)	1852
TfiI	GAWTC	5 cut(s)	83, 899, 1184, 1610, 1625
Tru1I	TTAA	8 cut(s)	255, 458, 485, 560, 1421, 2019, 2106, 2184
Tru9I	TTAA	8 cut(s)	255, 458, 485, 560, 1421, 2019, 2106, 2184
TscAI	CASTG	6 cut(s)	196, 333, 775, 1195, 1717, 1758
TseFI	GTSAC	4 cut(s)	119, 473, 881, 1793
TseI	GCWGC	7 cut(s)	264, 757, 1047, 1382, 1580, 1756, 2042
Tsp45I	GTSAC	4 cut(s)	119, 473, 881, 1793
TspDTI	ATGAA	9 cut(s)	162, 276, 450, 734, 986, 1479, 1631, 1749, 2165
TspRI	CASTG	6 cut(s)	196, 333, 775, 1195, 1717, 1758
Van91I	CCANNNNNTGG	1 cut(s)	2261
VpaK11BI	GGWCC	1 cut(s)	1357
VspI	ATTAAT	1 cut(s)	2184
XagI	CCTNNNNNAGG	2 cut(s)	1581, 2060
XapI	RAATTY	2 cut(s)	446, 1498
XbaI	TCTAGA	3 cut(s)	1784, 1913, 2005
XceI	RCATGY	3 cut(s)	509, 2086, 2162
XhoI	CTCGAG	1 cut(s)	1896
XmnI	GAANNNNTTC	2 cut(s)	2271, 2338
XspI	CTAG	9 cut(s)	1127, 1512, 1635, 1649, 1785, 1914, 1956, 1968, 2006

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.