Rroxscaffold_5G00333050

RING-like zinc finger

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000005
OG0003873
Physical Location & Seq
Forward (+)
502493 .. 510865
8373 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_5G00333050.1

Sequence Viewer

Length: 1647 bp
ATGGCTCTTCATTCTTTTACCCTGCCAAGAGTCAGTGGCCAGAAAAGGTTGGTAAGGAATGGTTGTATTTCCCCACATAACATAGCAACAAGGTCTAAACAATTAGATGTAGAGAATAATACGAGTTCCAAGAATATTGAACACAGCCATGCTATCGATGCGGTTTCCAGTGGTTCACCATATGTCATAGGTACAAGTGATGTGGTCACTGAAGAGAATAAAAGGGAAAGAGCGAAAGGGAAAGGGGTAATGGTTCAACCTTCTACACCAAAGGAGAATAATGCAAGAATTGTTCATACATCAAGCAGTCTTCTGAATGATAATATTGAAGCTAATAGAACCAGACATGTTGGCAAAGATATATCTGGATGCTCTGAACGAATAGGTGGCTGGAGAAGTACGCGTAATCGTTCAAGGACATTTGATCCTCTCTTGTCTGATTCAACTGAGCATCTTCCCAGAATAATTAACGGTGCCGGAAACTTTGTAAATCAACATGGAAACAGAGTAGAGAGGGAGGATACTGGGAGGGAAGGAAACTTTGTAAACTTTGCAGATGATCTGAATTCAACTCAAACAGCTTCAACAGTTGTATCTGAGCCAGGCTGGATGGCTGGACAACGTCGTGAAGGAAGGAGAGTTAGTAAAAGGGAGAAGAAACGGGGACTGAATATGGGAAATCATGGTGAATGCTCTACGTTGGATAATGGTGACTCCGACATTATGTTTCTTGGTTCATCTGAGACATCTGAAAGTTCAAAATCATCCAGGATTCACAGACCTCAGTTTCAGGGAATGTTGAGGCCAATTATTGAAGTTGATGAGTTGTCACCTGCTGCAGGTCCATCTGACCCCCAAGGTATCAATTCCATGAATGATGATTCAGAGGCTACAGAGGCTAAGGCAAGGCAACTAGAAGCCGATGAGATGTTGGCACGTGAACTGCAGGAACAATTGTATCATGAGGTTCCTGCTTTTGGTGGTGGCGAGCATTTTGATGAACATCTAGCTTGGGCACTGCAGCGGGAGGAGAATGCTTTTGTTACGTCATCTAGTGGAAGGCACAATATGCCTCATAGTAGAGGCTCCACAATATTGCATTCTCATAGACAGCCCCAGTCACAATCGTCTCAAAATCCTTCAACAAGGAGAGGAGCCCAGGCTCGAGTTCCCAGCCATTCTACAATGGCACAGTTAAGGAGTCGCCTTCGCAACCAGGCTCCTAGAGTATCAAATAGAAGAAGGAATCTGCGAGTTCCTTTTCCTTCGGACATGGATCTAGACATGAGACTTAATATACTTGAAGCTTTAGAGACTGCTGTTGGGGATGTTGGAGATGTGGGATTGAATAATCACATGTTTCGACTTCAGCGGGATTTCAATGCCGATGATTATGAGATGTTATTGTCACTTGATGAGAACAATCATCAACTTGGCGGTGCAACAGCTAATCAAATTAATAATTTGCCTCAATCTACAGTACAGACTGATGCCTCTGAAGAAGCTTGTGCAATCTGTCTTGAAACTCCAACACTTGGAGAAACAGTTCGTCATCTTCCGTGCTTGCACAGATTTCACAAAGATTGTATCGATCCATGGCTCAACAGAAAAACTTCGTGCCCAGTTTGCAAGTGTTCGATCAGTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
zf-RING_2

Protein Analysis

548

Amino Acids

60.85

Weight (kDa)

6.65

Isoelectric Point (pI)

60.08

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-rbx1 PF12678 500 - 544 1.1e-07 RING-H2 zinc finger domain
zf-RING_2 PF13639 502 - 544 3.9e-12 Ring finger domain
zf-C3HC4_2 PF13923 503 - 543 1.3e-08 Zinc finger, C3HC4 type (RING finger)
zf-RING_11 PF17123 503 - 530 2.7e-08 RING-like zinc finger
zf-C3HC4 PF00097 503 - 543 4.9e-08 Zinc finger, C3HC4 type (RING finger)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 841
Acc36I ACCTGC 2 cut(s) 830, 841
AccB1I GGYRCC 1 cut(s) 473
AccB7I CCANNNNNTGG 1 cut(s) 1535
AccII CGCG 1 cut(s) 403
AciI CCGC 4 cut(s) 161, 1024, 1372, 1437
AclWI GGATC 3 cut(s) 419, 1284, 1586
AcoI YGGCCR 1 cut(s) 37
AcsI RAATTY 1 cut(s) 565
AcuI CTGAAG 3 cut(s) 231, 1352, 1518
AcvI CACGTG 1 cut(s) 938
AfaI GTAC 3 cut(s) 193, 400, 1482
AfiI CCNNNNNNNGG 3 cut(s) 839, 977, 1535
AflIII ACRYGT 3 cut(s) 346, 401, 1356
AjnI CCWGG 4 cut(s) 601, 767, 1158, 1215
AloI GAACNNNNNNTCC 2 cut(s) 1530, 1562
AluBI AGCT 6 cut(s) 332, 581, 1010, 1307, 1448, 1505
AluI AGCT 6 cut(s) 332, 581, 1010, 1307, 1448, 1505
Alw26I GTCTC 4 cut(s) 737, 1134, 1282, 1307
AlwI GGATC 3 cut(s) 419, 1284, 1586
Ama87I CYCGRG 1 cut(s) 1164
AoxI GGCC 2 cut(s) 37, 803
ApeKI GCWGC 2 cut(s) 836, 1021
ApoI RAATTY 1 cut(s) 565
AseI ATTAAT 1 cut(s) 1458
Asp700I GAANNNNTTC 2 cut(s) 1545, 1612
AspS9I GGNCC 1 cut(s) 842
AsuHPI GGTGA 4 cut(s) 168, 698, 722, 822
AvaI CYCGRG 1 cut(s) 1164
AvaII GGWCC 1 cut(s) 842
BaeGI GKGCMC 2 cut(s) 1018, 1622
BaeI ACNNNNGTAYC 4 cut(s) 576, 609, 941, 974
BalI TGGCCA 1 cut(s) 39
BanI GGYRCC 1 cut(s) 473
BanII GRGCYC 1 cut(s) 1159
BbrPI CACGTG 1 cut(s) 938
BbsI GAAGAC 1 cut(s) 302
BbvI GCAGC 2 cut(s) 823, 1033
BccI CCATC 2 cut(s) 604, 853
BciT130I CCWGG 4 cut(s) 603, 769, 1160, 1217
BciVI GTATCC 1 cut(s) 514
BcoDI GTCTC 4 cut(s) 737, 1134, 1282, 1307
BfaI CTAG 5 cut(s) 914, 1007, 1053, 1224, 1280
BfmI CTRYAG 5 cut(s) 837, 891, 944, 1019, 1476
BfuAI ACCTGC 2 cut(s) 830, 841
BfuI GTATCC 1 cut(s) 514
BisI GCNGC 2 cut(s) 837, 1022
BlsI GCNGC 2 cut(s) 838, 1023
Bme1390I CCNGG 4 cut(s) 603, 769, 1160, 1217
Bme18I GGWCC 1 cut(s) 842
BmeT110I CYCGRG 1 cut(s) 1164
BmgT120I GGNCC 1 cut(s) 842
BmiI GGNNCC 5 cut(s) 475, 969, 1087, 1156, 1221
BmrFI CCNGG 4 cut(s) 603, 769, 1160, 1217
BmrI ACTGGG 3 cut(s) 534, 1111, 1616
BmsI GCATC 4 cut(s) 148, 359, 460, 1480
BmuI ACTGGG 3 cut(s) 534, 1111, 1616
BpiI GAAGAC 1 cut(s) 302
BpmI CTGGAG 1 cut(s) 412
Bpu10I CCTNAGC 1 cut(s) 900
Bsa29I ATCGAT 2 cut(s) 156, 1590
BsaAI YACGTR 1 cut(s) 938
BsaBI GATNNNNATC 1 cut(s) 1002
BsaJI CCNNGG 3 cut(s) 856, 1158, 1595
BsaXI ACNNNNNCTCC 4 cut(s) 628, 658, 1530, 1560
Bsc4I CCNNNNNNNGG 3 cut(s) 839, 977, 1535
Bse1I ACTGG 4 cut(s) 168, 529, 1117, 1622
Bse8I GATNNNNATC 1 cut(s) 1002
BseBI CCWGG 4 cut(s) 603, 769, 1160, 1217
BseCI ATCGAT 2 cut(s) 156, 1590
BseDI CCNNGG 3 cut(s) 856, 1158, 1595
BseGI GGATG 4 cut(s) 374, 615, 764, 1333
BseJI GATNNNNATC 1 cut(s) 1002
BseLI CCNNNNNNNGG 3 cut(s) 839, 977, 1535
BseMII CTCAG 4 cut(s) 438, 588, 732, 797
BseNI ACTGG 4 cut(s) 168, 529, 1117, 1622
BseRI GAGGAG 2 cut(s) 1043, 1167
BseSI GKGCMC 2 cut(s) 1018, 1622
BseXI GCAGC 2 cut(s) 823, 1033
BseYI CCCAGC 1 cut(s) 1172
Bsh1236I CGCG 1 cut(s) 403
BshFI GGCC 2 cut(s) 39, 805
BshNI GGYRCC 1 cut(s) 473
BshVI ATCGAT 2 cut(s) 156, 1590
BsiHKCI CYCGRG 1 cut(s) 1164
BsiSI CCGG 1 cut(s) 477
BslFI GGGAC 1 cut(s) 678
BslI CCNNNNNNNGG 3 cut(s) 839, 977, 1535
BsmAI GTCTC 4 cut(s) 737, 1134, 1282, 1307
BsmBI CGTCTC 1 cut(s) 1134
BsmFI GGGAC 1 cut(s) 678
BsmI GAATGC 3 cut(s) 695, 1039, 1099
BsnI GGCC 2 cut(s) 39, 805
BsoBI CYCGRG 1 cut(s) 1164
Bsp1286I GDGCHC 3 cut(s) 1018, 1159, 1622
Bsp143I GATC 5 cut(s) 424, 559, 1276, 1591, 1638
Bsp19I CCATGG 1 cut(s) 1595
BspACI CCGC 4 cut(s) 161, 1024, 1372, 1437
BspANI GGCC 2 cut(s) 39, 805
BspCNI CTCAG 4 cut(s) 439, 589, 733, 796
BspDI ATCGAT 2 cut(s) 156, 1590
BspFNI CGCG 1 cut(s) 403
BspHI TCATGA 1 cut(s) 961
BspLI GGNNCC 5 cut(s) 475, 969, 1087, 1156, 1221
BspMAI CTGCAG 3 cut(s) 841, 948, 1023
BspMI ACCTGC 2 cut(s) 830, 841
BspPI GGATC 3 cut(s) 419, 1284, 1586
BspQI GCTCTTC 1 cut(s) 12
BspT107I GGYRCC 1 cut(s) 473
BsrI ACTGG 4 cut(s) 168, 529, 1117, 1622
BssECI CCNNGG 3 cut(s) 856, 1158, 1595
BssMI GATC 5 cut(s) 424, 559, 1276, 1591, 1638
BssT1I CCWWGG 2 cut(s) 856, 1595
Bst2UI CCWGG 4 cut(s) 603, 769, 1160, 1217
Bst4CI ACNGT 5 cut(s) 473, 589, 1194, 1480, 1546
Bst6I CTCTTC 2 cut(s) 12, 207
BstAPI GCANNNNNTGC 1 cut(s) 1069
BstBAI YACGTR 1 cut(s) 938
BstC8I GCNNGC 2 cut(s) 989, 1565
BstDEI CTNAG 5 cut(s) 447, 597, 741, 783, 900
BstDSI CCRYGG 1 cut(s) 1595
BstENI CCTNNNNNAGG 1 cut(s) 837
BstF5I GGATG 4 cut(s) 374, 615, 764, 1333
BstFNI CGCG 1 cut(s) 403
BstKTI GATC 5 cut(s) 427, 562, 1279, 1594, 1641
BstMAI GTCTC 4 cut(s) 737, 1134, 1282, 1307
BstMBI GATC 5 cut(s) 424, 559, 1276, 1591, 1638
BstMWI GCNNNNNNNGC 4 cut(s) 158, 896, 1069, 1626
BstNI CCWGG 4 cut(s) 603, 769, 1160, 1217
BstNSI RCATGY 2 cut(s) 350, 1360
BstSCI CCNGG 4 cut(s) 601, 767, 1158, 1215
BstSFI CTRYAG 5 cut(s) 837, 891, 944, 1019, 1476
BstSLI GKGCMC 2 cut(s) 1018, 1622
BstUI CGCG 1 cut(s) 403
BstV1I GCAGC 2 cut(s) 823, 1033
BstV2I GAAGAC 1 cut(s) 302
BstX2I RGATCY 1 cut(s) 1276
BstYI RGATCY 1 cut(s) 1276
Bsu15I ATCGAT 2 cut(s) 156, 1590
BsuI GTATCC 1 cut(s) 514
BsuRI GGCC 2 cut(s) 39, 805
BsuTUI ATCGAT 2 cut(s) 156, 1590
BtgI CCRYGG 1 cut(s) 1595
BtsCI GGATG 4 cut(s) 374, 615, 764, 1333
BtsI GCAGTG 1 cut(s) 1016
BtsIMutI CAGTG 4 cut(s) 40, 175, 207, 1016
BveI ACCTGC 2 cut(s) 830, 841
Cac8I GCNNGC 2 cut(s) 989, 1565
CciI TCATGA 1 cut(s) 961
Cfr13I GGNCC 1 cut(s) 842
ClaI ATCGAT 2 cut(s) 156, 1590
Csp6I GTAC 3 cut(s) 192, 399, 1481
CspCI CAANNNNNGTGG 2 cut(s) 183, 218
CviQI GTAC 3 cut(s) 192, 399, 1481
DdeI CTNAG 5 cut(s) 447, 597, 741, 783, 900
DpnI GATC 5 cut(s) 426, 561, 1278, 1593, 1640
DpnII GATC 5 cut(s) 424, 559, 1276, 1591, 1638
EaeI YGGCCR 1 cut(s) 37
Eam1104I CTCTTC 2 cut(s) 12, 207
EarI CTCTTC 2 cut(s) 12, 207
Eco130I CCWWGG 2 cut(s) 856, 1595
Eco24I GRGCYC 1 cut(s) 1159
Eco47I GGWCC 1 cut(s) 842
Eco57I CTGAAG 3 cut(s) 231, 1352, 1518
Eco72I CACGTG 1 cut(s) 938
Eco88I CYCGRG 1 cut(s) 1164
EcoNI CCTNNNNNAGG 1 cut(s) 837
EcoRI GAATTC 1 cut(s) 565
EcoRII CCWGG 4 cut(s) 601, 767, 1158, 1215
EcoT14I CCWWGG 2 cut(s) 856, 1595
EcoT38I GRGCYC 1 cut(s) 1159
ErhI CCWWGG 2 cut(s) 856, 1595
Esp3I CGTCTC 1 cut(s) 1134
FaqI GGGAC 1 cut(s) 678
FauI CCCGC 2 cut(s) 1017, 1365
FauNDI CATATG 1 cut(s) 181
Fnu4HI GCNGC 2 cut(s) 837, 1022
FokI GGATG 4 cut(s) 381, 622, 751, 1340
FriOI GRGCYC 1 cut(s) 1159
Fsp4HI GCNGC 2 cut(s) 837, 1022
FspBI CTAG 5 cut(s) 914, 1007, 1053, 1224, 1280
GluI GCNGC 2 cut(s) 837, 1022
GsaI CCCAGC 1 cut(s) 1176
GsuI CTGGAG 1 cut(s) 412
HaeIII GGCC 2 cut(s) 39, 805
HapII CCGG 1 cut(s) 477
HindIII AAGCTT 2 cut(s) 1305, 1503
HinfI GANTC 7 cut(s) 30, 440, 713, 772, 881, 1201, 1246
HpaII CCGG 1 cut(s) 477
HphI GGTGA 4 cut(s) 168, 698, 722, 822
Hpy166II GTNNAC 3 cut(s) 176, 547, 941
Hpy188III TCNNGA 5 cut(s) 366, 626, 962, 1280, 1520
Hpy8I GTNNAC 3 cut(s) 176, 547, 941
Hpy99I CGWCG 1 cut(s) 627
HpyAV CCTTC 9 cut(s) 270, 527, 623, 627, 1053, 1149, 1217, 1236, 1275
HpyCH4III ACNGT 5 cut(s) 473, 589, 1194, 1480, 1546
HpyCH4IV ACGT 4 cut(s) 622, 698, 937, 1046
HpyF10VI GCNNNNNNNGC 4 cut(s) 158, 896, 1069, 1626
HpyF3I CTNAG 5 cut(s) 447, 597, 741, 783, 900
HpySE526I ACGT 4 cut(s) 622, 698, 937, 1046
Kzo9I GATC 5 cut(s) 424, 559, 1276, 1591, 1638
LguI GCTCTTC 1 cut(s) 12
LmnI GCTCC 3 cut(s) 1091, 1154, 1225
Lsp1109I GCAGC 2 cut(s) 823, 1033
LweI GCATC 4 cut(s) 148, 359, 460, 1480
MaeI CTAG 5 cut(s) 914, 1007, 1053, 1224, 1280
MaeII ACGT 4 cut(s) 622, 698, 937, 1046
MaeIII GTNAC 6 cut(s) 205, 710, 828, 1042, 1119, 1407
MalI GATC 5 cut(s) 426, 561, 1278, 1593, 1640
MboI GATC 5 cut(s) 424, 559, 1276, 1591, 1638
MboII GAAGA 7 cut(s) 224, 302, 446, 667, 1251, 1511, 1547
MfeI CAATTG 1 cut(s) 953
MflI RGATCY 1 cut(s) 1276
MhlI GDGCHC 3 cut(s) 1018, 1159, 1622
MlsI TGGCCA 1 cut(s) 39
MluCI AATT 9 cut(s) 101, 288, 465, 565, 807, 865, 953, 1455, 1462
MluI ACGCGT 1 cut(s) 401
MluNI TGGCCA 1 cut(s) 39
MlyI GAGTC 3 cut(s) 39, 707, 1210
MmeI TCCRAC 4 cut(s) 681, 741, 1312, 1553
Mox20I TGGCCA 1 cut(s) 39
MroXI GAANNNNTTC 2 cut(s) 1545, 1612
MscI TGGCCA 1 cut(s) 39
MseI TTAA 4 cut(s) 468, 1196, 1293, 1458
MslI CAYNNNNRTG 2 cut(s) 147, 996
Msp20I TGGCCA 1 cut(s) 39
MspA1I CMGCKG 2 cut(s) 1024, 1372
MspI CCGG 1 cut(s) 477
MspR9I CCNGG 4 cut(s) 603, 769, 1160, 1217
MunI CAATTG 1 cut(s) 953
Mva1269I GAATGC 3 cut(s) 695, 1039, 1099
MvaI CCWGG 4 cut(s) 603, 769, 1160, 1217
MvnI CGCG 1 cut(s) 403
MwoI GCNNNNNNNGC 4 cut(s) 158, 896, 1069, 1626
NcoI CCATGG 1 cut(s) 1595
NdeI CATATG 1 cut(s) 181
NdeII GATC 5 cut(s) 424, 559, 1276, 1591, 1638
NlaIV GGNNCC 5 cut(s) 475, 969, 1087, 1156, 1221
NmuCI GTSAC 5 cut(s) 205, 710, 828, 1119, 1407
NspI RCATGY 2 cut(s) 350, 1360
PaeR7I CTCGAG 1 cut(s) 1164
PagI TCATGA 1 cut(s) 961
PaqCI CACCTGC 1 cut(s) 841
PciI ACATGT 2 cut(s) 346, 1356
PciSI GCTCTTC 1 cut(s) 12
PctI GAATGC 3 cut(s) 695, 1039, 1099
PdmI GAANNNNTTC 2 cut(s) 1545, 1612
PfeI GAWTC 4 cut(s) 440, 772, 881, 1246
PflFI GACNNNGTC 1 cut(s) 621
PflMI CCANNNNNTGG 1 cut(s) 1535
PfoI TCCNGGA 1 cut(s) 767
PkrI GCNGC 2 cut(s) 838, 1023
PleI GAGTC 3 cut(s) 38, 707, 1209
PmaCI CACGTG 1 cut(s) 938
PmlI CACGTG 1 cut(s) 938
PpsI GAGTC 3 cut(s) 38, 707, 1209
Ppu21I YACGTR 1 cut(s) 938
PscI ACATGT 2 cut(s) 346, 1356
PshBI ATTAAT 1 cut(s) 1458
Psp6I CCWGG 4 cut(s) 601, 767, 1158, 1215
PspCI CACGTG 1 cut(s) 938
PspFI CCCAGC 1 cut(s) 1172
PspGI CCWGG 4 cut(s) 601, 767, 1158, 1215
PspN4I GGNNCC 5 cut(s) 475, 969, 1087, 1156, 1221
PspPI GGNCC 1 cut(s) 842
PspXI VCTCGAGB 1 cut(s) 1164
PstI CTGCAG 3 cut(s) 841, 948, 1023
PsuI RGATCY 1 cut(s) 1276
PsyI GACNNNGTC 1 cut(s) 621
RsaI GTAC 3 cut(s) 193, 400, 1482
RsaNI GTAC 3 cut(s) 192, 399, 1481
RseI CAYNNNNRTG 2 cut(s) 147, 996
SapI GCTCTTC 1 cut(s) 12
SaqAI TTAA 4 cut(s) 468, 1196, 1293, 1458
SatI GCNGC 2 cut(s) 837, 1022
Sau3AI GATC 5 cut(s) 424, 559, 1276, 1591, 1638
Sau96I GGNCC 1 cut(s) 842
SchI GAGTC 3 cut(s) 39, 707, 1210
ScrFI CCNGG 4 cut(s) 603, 769, 1160, 1217
SduI GDGCHC 3 cut(s) 1018, 1159, 1622
SfaNI GCATC 4 cut(s) 148, 359, 460, 1480
SfcI CTRYAG 5 cut(s) 837, 891, 944, 1019, 1476
Sfr274I CTCGAG 1 cut(s) 1164
SinI GGWCC 1 cut(s) 842
SlaI CTCGAG 1 cut(s) 1164
SmiMI CAYNNNNRTG 2 cut(s) 147, 996
SmlI CTYRAG 1 cut(s) 1164
SmoI CTYRAG 1 cut(s) 1164
Sse9I AATT 9 cut(s) 101, 288, 465, 565, 807, 865, 953, 1455, 1462
SsiI CCGC 4 cut(s) 161, 1024, 1372, 1437
SspI AATATT 3 cut(s) 136, 325, 1095
SspMI CTAG 5 cut(s) 914, 1007, 1053, 1224, 1280
StyD4I CCNGG 4 cut(s) 601, 767, 1158, 1215
StyI CCWWGG 2 cut(s) 856, 1595
TaaI ACNGT 5 cut(s) 473, 589, 1194, 1480, 1546
TaiI ACGT 4 cut(s) 625, 701, 940, 1049
TaqI TCGA 5 cut(s) 156, 1165, 1363, 1590, 1637
TasI AATT 9 cut(s) 101, 288, 465, 565, 807, 865, 953, 1455, 1462
TatI WGTACW 1 cut(s) 1480
TfiI GAWTC 4 cut(s) 440, 772, 881, 1246
Tru1I TTAA 4 cut(s) 468, 1196, 1293, 1458
Tru9I TTAA 4 cut(s) 468, 1196, 1293, 1458
TscAI CASTG 4 cut(s) 40, 175, 214, 1023
TseFI GTSAC 5 cut(s) 205, 710, 828, 1119, 1407
TseI GCWGC 2 cut(s) 836, 1021
Tsp45I GTSAC 5 cut(s) 205, 710, 828, 1119, 1407
TspDTI ATGAA 4 cut(s) 284, 726, 887, 1014
TspGWI ACGGA 1 cut(s) 1548
TspRI CASTG 4 cut(s) 40, 175, 214, 1023
Tth111I GACNNNGTC 1 cut(s) 621
Van91I CCANNNNNTGG 1 cut(s) 1535
VpaK11BI GGWCC 1 cut(s) 842
VspI ATTAAT 1 cut(s) 1458
XagI CCTNNNNNAGG 1 cut(s) 837
XapI RAATTY 1 cut(s) 565
XbaI TCTAGA 1 cut(s) 1279
XceI RCATGY 2 cut(s) 350, 1360
XhoI CTCGAG 1 cut(s) 1164
XmnI GAANNNNTTC 2 cut(s) 1545, 1612
XspI CTAG 5 cut(s) 914, 1007, 1053, 1224, 1280
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.