Rh4BG002400

RING-like zinc finger

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4B
OG0003873
Physical Location & Seq
Forward (+)
545992 .. 577939
31948 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4BG002400.1

Sequence Viewer

Length: 2484 bp
ATGGGCTCTGAGATTGAGAGAGAGAATTTGGGGGAGGAGAAGAGCGTGGAGATGAAGATGGGTTTAGCTTTGTTGGGGGTTTGGATTTTGAGAAATCATCATCTCGTTCCTCAATTCAACTTCTGGGCTCCTCTTCTCTTCGCTCTTCAACAACAACGAAATCATCAGATTATGGAGGACATGGACATCGATGATGTGGTTATACCTGACACGCCACCTACCAGACATGGTGTTTGCAGGGAATCTGTTGGTAAAGCCTGTAGTTCACCATTAGCTCACAAGTTGAATAATTCAGACTTTGTTGATGAGAAATCTGGGAATGGGCCAAGGGTCAAGGAGAGATTCTTCTATGAAAATGGTCAAAATAAAAGAATTGTTATTCTCCCTCCGAGAAATCCTAGCAATCTTGCAATTAAGAATGGCTCCTCAGGAACCAATTCATCTGCTTCCCAGAATGCTCACCTCTTTAGAAGACCAGCAGTGGGCAGAAACTCTAGTTGTGAGACCAAACATTCATCTGGGACCGGAAGCTTGGACAAAGGAAAGTCTATAAGCATTAAAGCGTCGTCTAAATCTTCTGCTTTCCCAGAAAACATGGAAGTTCTTGATTTAACTGAACAGAATGGTCACTCCCAGTTACACAGAAAGGTTTTCCCACATGGAAAATTAGAAGATGTTGCTCAAGGCACAAAAAACCGGCAGATAATGTCAGTTGGCAGTTCTACAGATTGCTCTGCAAATTACTTGGAGAGATCCAGAAATGCCGACAAGGCTAAGGAAAAAATAGATGACAGTACATATAATGGTGTGGGTTTAGCTGTGCCCCTGGGAAAAAGGATTGATCTGCCTACTGAGCCTCAACATAAAACAGAGCATCAAAAGCCCATGGCTCTCCATTCTTTTACCCTGCCAAGAGTCAGTGGCCAGAAAAGGTTGGTAAGGAATGGTTGTATTTCCCCACATAACATAGCAACAAGGTCTAAACAATTAGATGTAGAGAATAATACAAGTTCCAAGAATATTGAACACAGTCATGCTGTCGACGCGGTTTCCAGTGGTTCACCATATGTCATAGGTACAAGTGATGTGGTCACTGAAGAGAATAAAAGGGAAAGAGTGAAAGGGAAAGGGGTAATGGTTCAACCTTCTACACCAAAGGAGAATAATGAAAGAATTGTTCATACATCAAGCAGTCTTCTGAATGATAATATTGAAGCTAATAGAACCAGACATGTTGGCAAAGATATATCTGGATGCTCCGAACGAATAGGTGGCTGGAGAAGTACGCGTAATCGTTCAAGGACATTAGATCCTCTTTTGTCTGATTCAACTGAGCATCTTCCCAGAATAATTAACGGTGCCGGAAACTTTGTAAATCAACATGGAAACAGAGTAGAGAGGGAGGATACTGGGAGGGAAGGAAACTTTGTAAACTTTGCAGACGATCTGAATTCAACTCAAACAGCTTCAACAGTTGTATCTGAGCCAGGCTGGATGGCTGGACAACGTCGTGAAGGAAGGAGAGTTAGTAAAAGGGAGAAGAAACGGGGATTGAATATGGGAAATCATGGTGAATGCTCTACGTTGGATAATGGTGATTCAGACATTATGTTTCTCGGTTCATCTGAGACATCTGAAAGTTCAAAATCATCCAGGATTCACAGACCTCAGTTTCAGGGAATGTTGAGGCCAATTATTGAAGTTGATGAGTTGTCACCTGCTGCAGGTCCCTCTGACCCCCAAGGTATCAATTCCATGAATGATGATTCAGAGGCTAGGGCAAGGCAACTAGAAGCCGATGAGATGTTGGCACGTGAACTGCAGGAACAATTGTATCATGAGGTTCCTGCTTTTGGTGGTGGCGAGCATTTTGATGAACATCTAGCTTGGGCACTGCAGCGGGAGGAGAATGCTTTTACTACGTCATCTAGTGGAAGGCACAATATGCCTCATAGTAGAGGCTCCACAATATTGCATTCTCATAGACAGCCCCCATCACAATCGTCTCAAAATCCTTCAACAAGGAGAGGAGCCCAGGCTCGAGTTCCCAGCCATTCTACAATGGCACAGTTAAGGAGTCGCCTTCGCAATCAGGCTCCTAGAGTGTCAAATAGAAGAAGGAATCTGCGAGTTCCTTTTCCTTCGGACATGGATCTAGACATGTTGTTTCTTTTCAAAAAAAAAAAAGAGACTGCTGTTGGGGATGTTGGAGATGTGGGATTGAATAATCACATGTTTCGACTTCAGCGGGATTTCAATGCTGATGATTATGAGATGTTATTGGCACTTGATGAGAACAATCATCAACTTGGCGGTGCAACAGCTAATCAAATTAATAATTTGCCTCAATCTACAGTACAGACTGATGCCTCTGAAGAAGCTTGTGCAATCTGTCTTGAAACTCCAACACTTGGAGAAACAGTTCGTCATCTTCCTTGCTTGCACAGATTTCACAAAGATGTAGGGACTTGCACTCTTCTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
zf-RING_2

Protein Analysis

827

Amino Acids

91.75

Weight (kDa)

8.0

Isoelectric Point (pI)

52.79

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-RING_11 PF17123 795 - 819 2.9e-06 RING-like zinc finger
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1726
Acc36I ACCTGC 2 cut(s) 1715, 1726
AccB1I GGYRCC 1 cut(s) 1358
AccB7I CCANNNNNTGG 1 cut(s) 2411
AccI GTMKAC 1 cut(s) 1041
AccII CGCG 2 cut(s) 1046, 1288
AciI CCGC 4 cut(s) 1046, 1900, 2248, 2313
AclWI GGATC 3 cut(s) 747, 1304, 2160
AcoI YGGCCR 1 cut(s) 922
AcsI RAATTY 2 cut(s) 25, 1450
AcuI CTGAAG 3 cut(s) 1116, 2228, 2394
AcvI CACGTG 1 cut(s) 1814
AfaI GTAC 4 cut(s) 796, 1078, 1285, 2358
AfiI CCNNNNNNNGG 4 cut(s) 482, 1724, 1853, 2411
AflIII ACRYGT 4 cut(s) 1231, 1286, 2160, 2232
AjnI CCWGG 4 cut(s) 825, 1486, 1652, 2034
AloI GAACNNNNNNTCC 2 cut(s) 2406, 2438
AluBI AGCT 9 cut(s) 68, 275, 531, 818, 1217, 1466, 1886, 2324, 2381
AluI AGCT 9 cut(s) 68, 275, 531, 818, 1217, 1466, 1886, 2324, 2381
Alw26I GTCTC 4 cut(s) 497, 1622, 2010, 2183
AlwI GGATC 3 cut(s) 747, 1304, 2160
Ama87I CYCGRG 1 cut(s) 2040
AoxI GGCC 3 cut(s) 323, 922, 1688
ApeKI GCWGC 2 cut(s) 1721, 1897
ApoI RAATTY 2 cut(s) 25, 1450
ArsI GACNNNNNNTTYG 2 cut(s) 216, 248
AseI ATTAAT 1 cut(s) 2334
Asp700I GAANNNNTTC 2 cut(s) 436, 2421
AspS9I GGNCC 3 cut(s) 323, 522, 1727
AsuHPI GGTGA 6 cut(s) 258, 452, 1053, 1583, 1607, 1707
AvaI CYCGRG 1 cut(s) 2040
AvaII GGWCC 2 cut(s) 522, 1727
AxyI CCTNAGG 1 cut(s) 427
BaeGI GKGCMC 2 cut(s) 825, 1894
BaeI ACNNNNGTAYC 4 cut(s) 1461, 1494, 1817, 1850
BalI TGGCCA 1 cut(s) 924
BanI GGYRCC 1 cut(s) 1358
BanII GRGCYC 3 cut(s) 8, 130, 2035
BbrPI CACGTG 1 cut(s) 1814
BbsI GAAGAC 2 cut(s) 478, 1187
BbvI GCAGC 2 cut(s) 1708, 1909
BccI CCATC 3 cut(s) 52, 1489, 2002
BciT130I CCWGG 4 cut(s) 827, 1488, 1654, 2036
BciVI GTATCC 1 cut(s) 1399
BcoDI GTCTC 4 cut(s) 497, 1622, 2010, 2183
BfaI CTAG 8 cut(s) 399, 495, 1776, 1790, 1883, 1929, 2100, 2156
BfmI CTRYAG 6 cut(s) 259, 723, 1722, 1820, 1895, 2352
BfuAI ACCTGC 2 cut(s) 1715, 1726
BfuI GTATCC 1 cut(s) 1399
BglI GCCNNNNNGGC 1 cut(s) 770
BisI GCNGC 2 cut(s) 1722, 1898
BlsI GCNGC 2 cut(s) 1723, 1899
Bme1390I CCNGG 4 cut(s) 827, 1488, 1654, 2036
Bme18I GGWCC 2 cut(s) 522, 1727
BmeT110I CYCGRG 1 cut(s) 2040
BmgT120I GGNCC 3 cut(s) 323, 522, 1727
BmrFI CCNGG 4 cut(s) 827, 1488, 1654, 2036
BmrI ACTGGG 2 cut(s) 628, 1419
BmsI GCATC 4 cut(s) 883, 1244, 1345, 2356
BmuI ACTGGG 2 cut(s) 628, 1419
BpiI GAAGAC 2 cut(s) 478, 1187
BpmI CTGGAG 1 cut(s) 1297
Bpu10I CCTNAGC 1 cut(s) 774
BpuEI CTTGAG 1 cut(s) 666
Bsa29I ATCGAT 1 cut(s) 189
BsaAI YACGTR 1 cut(s) 1814
BsaBI GATNNNNATC 1 cut(s) 1878
BsaI GGTCTC 1 cut(s) 497
BsaJI CCNNGG 6 cut(s) 326, 825, 826, 885, 1741, 2034
BsaWI WCCGGW 1 cut(s) 524
BsaXI ACNNNNNCTCC 4 cut(s) 1513, 1543, 2406, 2436
Bsc4I CCNNNNNNNGG 4 cut(s) 482, 1724, 1853, 2411
Bse118I RCCGGY 1 cut(s) 696
Bse1I ACTGG 3 cut(s) 634, 1053, 1414
Bse21I CCTNAGG 1 cut(s) 427
Bse8I GATNNNNATC 1 cut(s) 1878
BseBI CCWGG 4 cut(s) 827, 1488, 1654, 2036
BseCI ATCGAT 1 cut(s) 189
BseDI CCNNGG 6 cut(s) 326, 825, 826, 885, 1741, 2034
BseGI GGATG 4 cut(s) 1259, 1500, 1649, 2209
BseJI GATNNNNATC 1 cut(s) 1878
BseLI CCNNNNNNNGG 4 cut(s) 482, 1724, 1853, 2411
BseMII CTCAG 6 cut(s) 441, 843, 1323, 1473, 1617, 1682
BseNI ACTGG 3 cut(s) 634, 1053, 1414
BseRI GAGGAG 5 cut(s) 50, 120, 415, 1919, 2043
BseSI GKGCMC 2 cut(s) 825, 1894
BseXI GCAGC 2 cut(s) 1708, 1909
BseYI CCCAGC 1 cut(s) 2048
Bsh1236I CGCG 2 cut(s) 1046, 1288
BshFI GGCC 3 cut(s) 325, 924, 1690
BshNI GGYRCC 1 cut(s) 1358
BshVI ATCGAT 1 cut(s) 189
BsiHKCI CYCGRG 1 cut(s) 2040
BsiSI CCGG 3 cut(s) 525, 697, 1362
BslFI GGGAC 3 cut(s) 535, 1713, 2479
BslI CCNNNNNNNGG 4 cut(s) 482, 1724, 1853, 2411
BsmAI GTCTC 4 cut(s) 497, 1622, 2010, 2183
BsmBI CGTCTC 1 cut(s) 2010
BsmFI GGGAC 3 cut(s) 535, 1713, 2479
BsmI GAATGC 4 cut(s) 460, 1580, 1915, 1975
BsnI GGCC 3 cut(s) 325, 924, 1690
Bso31I GGTCTC 1 cut(s) 497
BsoBI CYCGRG 1 cut(s) 2040
Bsp1286I GDGCHC 5 cut(s) 8, 130, 825, 1894, 2035
Bsp143I GATC 5 cut(s) 752, 841, 1309, 1444, 2152
Bsp19I CCATGG 1 cut(s) 885
BspACI CCGC 4 cut(s) 1046, 1900, 2248, 2313
BspANI GGCC 3 cut(s) 325, 924, 1690
BspCNI CTCAG 6 cut(s) 440, 844, 1324, 1474, 1618, 1681
BspDI ATCGAT 1 cut(s) 189
BspFNI CGCG 2 cut(s) 1046, 1288
BspHI TCATGA 1 cut(s) 1837
BspMAI CTGCAG 3 cut(s) 1726, 1824, 1899
BspMI ACCTGC 2 cut(s) 1715, 1726
BspPI GGATC 3 cut(s) 747, 1304, 2160
BspQI GCTCTTC 2 cut(s) 35, 150
BspT107I GGYRCC 1 cut(s) 1358
BspTNI GGTCTC 1 cut(s) 497
BsrFI RCCGGY 1 cut(s) 696
BsrI ACTGG 3 cut(s) 634, 1053, 1414
BssAI RCCGGY 1 cut(s) 696
BssECI CCNNGG 6 cut(s) 326, 825, 826, 885, 1741, 2034
BssMI GATC 5 cut(s) 752, 841, 1309, 1444, 2152
BssT1I CCWWGG 3 cut(s) 326, 885, 1741
Bst2UI CCWGG 4 cut(s) 827, 1488, 1654, 2036
Bst4CI ACNGT 7 cut(s) 794, 1031, 1358, 1474, 2070, 2356, 2422
Bst6I CTCTTC 6 cut(s) 35, 138, 143, 150, 1092, 2481
BstAPI GCANNNNNTGC 1 cut(s) 1945
BstBAI YACGTR 1 cut(s) 1814
BstC8I GCNNGC 2 cut(s) 1865, 2441
BstDEI CTNAG 8 cut(s) 9, 427, 774, 852, 1332, 1482, 1626, 1668
BstDSI CCRYGG 1 cut(s) 885
BstENI CCTNNNNNAGG 1 cut(s) 1722
BstF5I GGATG 4 cut(s) 1259, 1500, 1649, 2209
BstFNI CGCG 2 cut(s) 1046, 1288
BstKTI GATC 5 cut(s) 755, 844, 1312, 1447, 2155
BstMAI GTCTC 4 cut(s) 497, 1622, 2010, 2183
BstMBI GATC 5 cut(s) 752, 841, 1309, 1444, 2152
BstMWI GCNNNNNNNGC 5 cut(s) 770, 853, 880, 1043, 1945
BstNI CCWGG 4 cut(s) 827, 1488, 1654, 2036
BstNSI RCATGY 3 cut(s) 1235, 2164, 2236
BstSCI CCNGG 4 cut(s) 825, 1486, 1652, 2034
BstSFI CTRYAG 6 cut(s) 259, 723, 1722, 1820, 1895, 2352
BstSLI GKGCMC 2 cut(s) 825, 1894
BstUI CGCG 2 cut(s) 1046, 1288
BstV1I GCAGC 2 cut(s) 1708, 1909
BstV2I GAAGAC 2 cut(s) 478, 1187
BstX2I RGATCY 3 cut(s) 752, 1309, 2152
BstYI RGATCY 3 cut(s) 752, 1309, 2152
Bsu15I ATCGAT 1 cut(s) 189
Bsu36I CCTNAGG 1 cut(s) 427
BsuI GTATCC 1 cut(s) 1399
BsuRI GGCC 3 cut(s) 325, 924, 1690
BsuTUI ATCGAT 1 cut(s) 189
BtgI CCRYGG 1 cut(s) 885
BtsCI GGATG 4 cut(s) 1259, 1500, 1649, 2209
BtsI GCAGTG 2 cut(s) 486, 1892
BtsIMutI CAGTG 5 cut(s) 486, 925, 1060, 1092, 1892
BveI ACCTGC 2 cut(s) 1715, 1726
Cac8I GCNNGC 2 cut(s) 1865, 2441
CciI TCATGA 1 cut(s) 1837
Cfr10I RCCGGY 1 cut(s) 696
Cfr13I GGNCC 3 cut(s) 323, 522, 1727
ClaI ATCGAT 1 cut(s) 189
CseI GACGC 2 cut(s) 552, 1052
Csp6I GTAC 4 cut(s) 795, 1077, 1284, 2357
CspCI CAANNNNNGTGG 2 cut(s) 1068, 1103
CviQI GTAC 4 cut(s) 795, 1077, 1284, 2357
DdeI CTNAG 8 cut(s) 9, 427, 774, 852, 1332, 1482, 1626, 1668
DpnI GATC 5 cut(s) 754, 843, 1311, 1446, 2154
DpnII GATC 5 cut(s) 752, 841, 1309, 1444, 2152
EaeI YGGCCR 1 cut(s) 922
Eam1104I CTCTTC 6 cut(s) 35, 138, 143, 150, 1092, 2481
EarI CTCTTC 6 cut(s) 35, 138, 143, 150, 1092, 2481
Eco130I CCWWGG 3 cut(s) 326, 885, 1741
Eco24I GRGCYC 3 cut(s) 8, 130, 2035
Eco31I GGTCTC 1 cut(s) 497
Eco47I GGWCC 2 cut(s) 522, 1727
Eco57I CTGAAG 3 cut(s) 1116, 2228, 2394
Eco72I CACGTG 1 cut(s) 1814
Eco81I CCTNAGG 1 cut(s) 427
Eco88I CYCGRG 1 cut(s) 2040
EcoNI CCTNNNNNAGG 1 cut(s) 1722
EcoO109I RGGNCCY 1 cut(s) 1727
EcoRI GAATTC 1 cut(s) 1450
EcoRII CCWGG 4 cut(s) 825, 1486, 1652, 2034
EcoT14I CCWWGG 3 cut(s) 326, 885, 1741
EcoT38I GRGCYC 3 cut(s) 8, 130, 2035
ErhI CCWWGG 3 cut(s) 326, 885, 1741
Esp3I CGTCTC 1 cut(s) 2010
FaqI GGGAC 3 cut(s) 535, 1713, 2479
FauI CCCGC 2 cut(s) 1893, 2241
FauNDI CATATG 1 cut(s) 1066
FblI GTMKAC 1 cut(s) 1041
Fnu4HI GCNGC 2 cut(s) 1722, 1898
FokI GGATG 4 cut(s) 1266, 1507, 1636, 2216
FriOI GRGCYC 3 cut(s) 8, 130, 2035
Fsp4HI GCNGC 2 cut(s) 1722, 1898
FspBI CTAG 8 cut(s) 399, 495, 1776, 1790, 1883, 1929, 2100, 2156
GluI GCNGC 2 cut(s) 1722, 1898
GsaI CCCAGC 1 cut(s) 2052
GsuI CTGGAG 1 cut(s) 1297
HaeIII GGCC 3 cut(s) 325, 924, 1690
HapII CCGG 3 cut(s) 525, 697, 1362
HgaI GACGC 2 cut(s) 552, 1052
HincII GTYRAC 1 cut(s) 1042
HindII GTYRAC 1 cut(s) 1042
HindIII AAGCTT 2 cut(s) 529, 2379
HinfI GANTC 9 cut(s) 242, 342, 915, 1325, 1598, 1657, 1766, 2077, 2122
HpaII CCGG 3 cut(s) 525, 697, 1362
HphI GGTGA 6 cut(s) 258, 452, 1053, 1583, 1607, 1707
Hpy166II GTNNAC 5 cut(s) 266, 1042, 1061, 1432, 1817
Hpy188III TCNNGA 8 cut(s) 429, 605, 756, 1251, 1511, 1838, 2156, 2396
Hpy8I GTNNAC 5 cut(s) 266, 1042, 1061, 1432, 1817
Hpy99I CGWCG 3 cut(s) 568, 1046, 1512
HpyAV CCTTC 9 cut(s) 1155, 1412, 1508, 1512, 1929, 2025, 2093, 2112, 2151
HpyCH4III ACNGT 7 cut(s) 794, 1031, 1358, 1474, 2070, 2356, 2422
HpyCH4IV ACGT 4 cut(s) 1507, 1583, 1813, 1922
HpyF10VI GCNNNNNNNGC 5 cut(s) 770, 853, 880, 1043, 1945
HpyF3I CTNAG 8 cut(s) 9, 427, 774, 852, 1332, 1482, 1626, 1668
HpySE526I ACGT 4 cut(s) 1507, 1583, 1813, 1922
Kzo9I GATC 5 cut(s) 752, 841, 1309, 1444, 2152
LguI GCTCTTC 2 cut(s) 35, 150
LmnI GCTCC 6 cut(s) 133, 428, 1262, 1967, 2030, 2101
Lsp1109I GCAGC 2 cut(s) 1708, 1909
LweI GCATC 4 cut(s) 883, 1244, 1345, 2356
MaeI CTAG 8 cut(s) 399, 495, 1776, 1790, 1883, 1929, 2100, 2156
MaeII ACGT 4 cut(s) 1507, 1583, 1813, 1922
MaeIII GTNAC 4 cut(s) 626, 636, 1090, 1713
MalI GATC 5 cut(s) 754, 843, 1311, 1446, 2154
MboI GATC 5 cut(s) 752, 841, 1309, 1444, 2152
MfeI CAATTG 1 cut(s) 1829
MflI RGATCY 3 cut(s) 752, 1309, 2152
MhlI GDGCHC 5 cut(s) 8, 130, 825, 1894, 2035
MlsI TGGCCA 1 cut(s) 924
MluI ACGCGT 1 cut(s) 1286
MluNI TGGCCA 1 cut(s) 924
MlyI GAGTC 2 cut(s) 924, 2086
MmeI TCCRAC 3 cut(s) 1566, 2188, 2429
Mox20I TGGCCA 1 cut(s) 924
MroXI GAANNNNTTC 2 cut(s) 436, 2421
MscI TGGCCA 1 cut(s) 924
MseI TTAA 6 cut(s) 414, 558, 611, 1353, 2072, 2334
MslI CAYNNNNRTG 3 cut(s) 1032, 1872, 2457
Msp20I TGGCCA 1 cut(s) 924
MspA1I CMGCKG 2 cut(s) 1900, 2248
MspI CCGG 3 cut(s) 525, 697, 1362
MspR9I CCNGG 4 cut(s) 827, 1488, 1654, 2036
MunI CAATTG 1 cut(s) 1829
Mva1269I GAATGC 4 cut(s) 460, 1580, 1915, 1975
MvaI CCWGG 4 cut(s) 827, 1488, 1654, 2036
MvnI CGCG 2 cut(s) 1046, 1288
MwoI GCNNNNNNNGC 5 cut(s) 770, 853, 880, 1043, 1945
NcoI CCATGG 1 cut(s) 885
NdeI CATATG 1 cut(s) 1066
NdeII GATC 5 cut(s) 752, 841, 1309, 1444, 2152
NmuCI GTSAC 3 cut(s) 626, 1090, 1713
NspI RCATGY 3 cut(s) 1235, 2164, 2236
PaeR7I CTCGAG 1 cut(s) 2040
PagI TCATGA 1 cut(s) 1837
PaqCI CACCTGC 1 cut(s) 1726
PasI CCCWGGG 1 cut(s) 826
PciI ACATGT 3 cut(s) 1231, 2160, 2232
PciSI GCTCTTC 2 cut(s) 35, 150
PctI GAATGC 4 cut(s) 460, 1580, 1915, 1975
PdmI GAANNNNTTC 2 cut(s) 436, 2421
PfeI GAWTC 7 cut(s) 242, 342, 1325, 1598, 1657, 1766, 2122
PflFI GACNNNGTC 1 cut(s) 1506
PflMI CCANNNNNTGG 1 cut(s) 2411
PfoI TCCNGGA 1 cut(s) 1652
PkrI GCNGC 2 cut(s) 1723, 1899
PleI GAGTC 2 cut(s) 923, 2085
PmaCI CACGTG 1 cut(s) 1814
PmlI CACGTG 1 cut(s) 1814
PpsI GAGTC 2 cut(s) 923, 2085
Ppu21I YACGTR 1 cut(s) 1814
PpuMI RGGWCCY 1 cut(s) 1727
PscI ACATGT 3 cut(s) 1231, 2160, 2232
PshBI ATTAAT 1 cut(s) 2334
Psp5II RGGWCCY 1 cut(s) 1727
Psp6I CCWGG 4 cut(s) 825, 1486, 1652, 2034
PspCI CACGTG 1 cut(s) 1814
PspFI CCCAGC 1 cut(s) 2048
PspGI CCWGG 4 cut(s) 825, 1486, 1652, 2034
PspPI GGNCC 3 cut(s) 323, 522, 1727
PspPPI RGGWCCY 1 cut(s) 1727
PspXI VCTCGAGB 1 cut(s) 2040
PstI CTGCAG 3 cut(s) 1726, 1824, 1899
PsuI RGATCY 3 cut(s) 752, 1309, 2152
PsyI GACNNNGTC 1 cut(s) 1506
RsaI GTAC 4 cut(s) 796, 1078, 1285, 2358
RsaNI GTAC 4 cut(s) 795, 1077, 1284, 2357
RseI CAYNNNNRTG 3 cut(s) 1032, 1872, 2457
SalI GTCGAC 1 cut(s) 1040
SapI GCTCTTC 2 cut(s) 35, 150
SaqAI TTAA 6 cut(s) 414, 558, 611, 1353, 2072, 2334
SatI GCNGC 2 cut(s) 1722, 1898
Sau3AI GATC 5 cut(s) 752, 841, 1309, 1444, 2152
Sau96I GGNCC 3 cut(s) 323, 522, 1727
SchI GAGTC 2 cut(s) 924, 2086
ScrFI CCNGG 4 cut(s) 827, 1488, 1654, 2036
SduI GDGCHC 5 cut(s) 8, 130, 825, 1894, 2035
SfaNI GCATC 4 cut(s) 883, 1244, 1345, 2356
SfcI CTRYAG 6 cut(s) 259, 723, 1722, 1820, 1895, 2352
Sfr274I CTCGAG 1 cut(s) 2040
SinI GGWCC 2 cut(s) 522, 1727
SlaI CTCGAG 1 cut(s) 2040
SmiMI CAYNNNNRTG 3 cut(s) 1032, 1872, 2457
SmlI CTYRAG 2 cut(s) 681, 2040
SmoI CTYRAG 2 cut(s) 681, 2040
SsiI CCGC 4 cut(s) 1046, 1900, 2248, 2313
SspI AATATT 3 cut(s) 1021, 1210, 1971
SspMI CTAG 8 cut(s) 399, 495, 1776, 1790, 1883, 1929, 2100, 2156
StyD4I CCNGG 4 cut(s) 825, 1486, 1652, 2034
StyI CCWWGG 3 cut(s) 326, 885, 1741
TaaI ACNGT 7 cut(s) 794, 1031, 1358, 1474, 2070, 2356, 2422
TaiI ACGT 4 cut(s) 1510, 1586, 1816, 1925
TaqI TCGA 4 cut(s) 189, 1041, 2041, 2239
TatI WGTACW 2 cut(s) 794, 2356
TfiI GAWTC 7 cut(s) 242, 342, 1325, 1598, 1657, 1766, 2122
Tru1I TTAA 6 cut(s) 414, 558, 611, 1353, 2072, 2334
Tru9I TTAA 6 cut(s) 414, 558, 611, 1353, 2072, 2334
TscAI CASTG 5 cut(s) 486, 925, 1060, 1099, 1899
TseFI GTSAC 3 cut(s) 626, 1090, 1713
TseI GCWGC 2 cut(s) 1721, 1897
Tsp45I GTSAC 3 cut(s) 626, 1090, 1713
TspDTI ATGAA 9 cut(s) 68, 366, 429, 504, 1169, 1182, 1611, 1772, 1890
TspRI CASTG 5 cut(s) 486, 925, 1060, 1099, 1899
Tth111I GACNNNGTC 1 cut(s) 1506
Van91I CCANNNNNTGG 1 cut(s) 2411
VpaK11BI GGWCC 2 cut(s) 522, 1727
VspI ATTAAT 1 cut(s) 2334
XagI CCTNNNNNAGG 1 cut(s) 1722
XapI RAATTY 2 cut(s) 25, 1450
XbaI TCTAGA 1 cut(s) 2155
XceI RCATGY 3 cut(s) 1235, 2164, 2236
XhoI CTCGAG 1 cut(s) 2040
XmiI GTMKAC 1 cut(s) 1041
XmnI GAANNNNTTC 2 cut(s) 436, 2421
XspI CTAG 8 cut(s) 399, 495, 1776, 1790, 1883, 1929, 2100, 2156
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.