Rh4DG002700

RING-like zinc finger

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4D
OG0003873
Physical Location & Seq
Forward (+)
514878 .. 525163
10286 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4DG002700.1

Sequence Viewer

Length: 2349 bp
ATGGACGACATGGACATCGATGATGTGGTTATACCTGACACGCCACCTACCAGACATGGTGTTTGCAGGGAATCTGTTGGTAAAGCCTGTAGTTCACCATTAGCTCACAAGTTGAATAATTCAGACTTTGTTGATGAGAATTCTGGGAATGGGCCAAGGGTCAAGGAGAGATTCTTCTATGAAAATGGTCAAAATAAAAGAATTGTTATTCGCCCTCCGAGAAATCCTACCAATCTTGCAATTAAGAATGGCTCCTCAGGAACCAATTCATCTGCTTCCCAGAATGCTCACCTCTTTAGAAGACCAGCAGTGGGCAGAAACTCTAGTTGTGAGACCAAACATTCATCTGGGACCGGAAGCTTGGACAAAGGAAAGTCTATAAGCATTAAAGCGTCGTCTAAATCTTCTGCTTTCCCAGAAAACATGGAAGTTCTTGATTTAACTGAACAGAATGGTCACTCCCAGTTACACAGAAAGGTTTTCCCACATGGAAAATTAGAAGATGTTGCTCAAGGCACAAAAAACCGGCAGATAATGTCAGTTGGCAGTTCTACAGATTGCTCTGCAAATTACTTGGAGAGATCCAGAAATGCCGACAAGGCTAAGGAAAAAATAGATGACAGTACATATAATGGTGTGGGTTTAGCTGTGCCCCTGGGAAAAAGGATTGATCTGCCTACTGAGCCTCAACATAAAACAGAGCATCAAAAGCCCATGGCTCTTCATTCTTTTACCCTGCCAAGAGTCAGTGGCCAGAAAAGGTTGGTAAGGAATGGTTGTATTTCCCCACATAACATAGCAACAAGGTCTAAACAATTAGATGTAGAGAATAATACAAGTTCCAAGAATATTGAACACAGTCATGCTGTCGATGCGGTTTCCAGTGGTTCACCATATGTCATAGGTACAAGTGATGTGGTCACTGAAGAGAATAAAAGGGAAAGAGCGAAAGGGAAAGGGGTAATGGTTCAACCTTCTACACCAAAGGAGAATAATGAAAGAATTGTTCATACATCAAGCAGTCTTCTGAATGATAATATTGAAGCTAATAGAACCAGACATGTTGGCAAAGATATATCTGGATGCTCTGAACGAATAGGTGGCTGGAGAAGTACGCGTAATCGTTCAAGGACATTAGATCCTCTTTTGTCTGATTCAACTGAGCATCTTCCCAGAATAATTAACAGTGCCGGAAACTTTGTAAATCAACATGGAAACAGAGTAGAGAGGGAGGATACTGGGAGGGAAGGAAACTTTGTAAACTTTGCAGACGATCTGAATTCAACTCAAACAGCTTCAACAGTTGTATCTGAGCCAGGCTGGATGGCTGGACAACGTCGTGAAGGAAGGAGAGTTAGTAAAAGGGAGAAGAAACGGGGATTGAATATGGGAAATCATGGTGAATGCTCTACGTTGGATAATGGTGACTCAGACATTATGTTTCTCGGTTCATCTGAGACATCTGAAAGTTCAAAATCATCCAGGATTCACAGACCTCAGTTTCAGGTAATGTTGAGGCCAGTTATTGAAGTTGATGAGTTGTCACCTGCCGCAGGTCCCTCTGACCCCCAAGGTATCAATTCCATGAATGATGATTCAGAGGCTAAGGCAAGGCAACTAGAAGCCGATGAGATGTTGGCACGTGAACTGCAGGAACAGTTGTATCATGAGGTTCCTGCTTTTGGTGTTGGCGAGATTGATGAACATCTAGCTTGGGCACTGCAGCGGGAGGAGAATGCTTTTACTACGTCATCTAGTGGAAGGCACAGTATGCCTCATAGTAGAGGCTCCACAATATTGCATTCTCATAGACAGCCCCAGTCACAGTCGTCTCAAAATCCTTCAACGAGGAGAGGAGCCCCGGCTCGAGTTCCCAGCCATTCTACAATGGCACAGTTACGGAGTCGGCTTCGCAACCAGGCTCCTAGAGTATCAAATAGAAGAAGGAATCTGCGAGTTCCTTTTCCTTCGGACATGGATCTAGACATGAGACTTAATATACTTGAAGCTTTAGAGACTGCTGTTGGGGATGTTGGAGATGTGGGATTGAATAATCACATGTTTCGACTTCAGCGGGATTTCAATGCTGATGATTATGAGATGTTATTGGCACTTGATGAGAACAATCATCAACTTGGCGGTGCAACAGCTAATCAAATTAATAATTTGCCTCAATCTACAGTACAGACTGATGCCTCTGAAGAAGCTTGTGCAATCTGTCTTGAAACTCCAACACTTGGAGAAACAGTTCGTCATCTTCCTTGCTTGCACAGATTTCACAAAGATTGTATCGATCCATGGCTCAACAGAAAAACTTCGTGCCCAGTTTGCAAGTGTTCGATCAGTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
zf-RING_2

Protein Analysis

782

Amino Acids

86.39

Weight (kDa)

7.68

Isoelectric Point (pI)

53.17

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-rbx1 PF12678 734 - 778 1.8e-07 RING-H2 zinc finger domain
zf-RING_2 PF13639 736 - 778 6e-12 Ring finger domain
zf-C3HC4_2 PF13923 737 - 777 2.1e-08 Zinc finger, C3HC4 type (RING finger)
zf-RING_11 PF17123 737 - 764 4e-08 RING-like zinc finger
zf-C3HC4 PF00097 737 - 777 7.6e-08 Zinc finger, C3HC4 type (RING finger)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1555
Acc36I ACCTGC 2 cut(s) 1544, 1555
AccB7I CCANNNNNTGG 1 cut(s) 2237
AccII CGCG 1 cut(s) 1117
AciI CCGC 5 cut(s) 875, 1551, 1726, 2074, 2139
AclWI GGATC 4 cut(s) 576, 1133, 1986, 2288
AcoI YGGCCR 1 cut(s) 751
AcsI RAATTY 2 cut(s) 139, 1279
AcuI CTGAAG 3 cut(s) 945, 2054, 2220
AcvI CACGTG 1 cut(s) 1643
AfaI GTAC 4 cut(s) 625, 907, 1114, 2184
AfiI CCNNNNNNNGG 4 cut(s) 311, 1553, 1682, 2237
AflIII ACRYGT 3 cut(s) 1060, 1115, 2058
AjnI CCWGG 4 cut(s) 654, 1315, 1481, 1917
AloI GAACNNNNNNTCC 2 cut(s) 2232, 2264
AluBI AGCT 9 cut(s) 104, 360, 647, 1046, 1295, 1712, 2009, 2150, 2207
AluI AGCT 9 cut(s) 104, 360, 647, 1046, 1295, 1712, 2009, 2150, 2207
Alw26I GTCTC 5 cut(s) 326, 1451, 1836, 1984, 2009
AlwI GGATC 4 cut(s) 576, 1133, 1986, 2288
Ama87I CYCGRG 1 cut(s) 1866
AoxI GGCC 3 cut(s) 152, 751, 1517
ApeKI GCWGC 1 cut(s) 1723
ApoI RAATTY 2 cut(s) 139, 1279
ArsI GACNNNNNNTTYG 2 cut(s) 45, 77
AseI ATTAAT 1 cut(s) 2160
Asp700I GAANNNNTTC 3 cut(s) 265, 2247, 2314
AspS9I GGNCC 3 cut(s) 152, 351, 1556
AsuC2I CCSGG 1 cut(s) 1862
AsuHPI GGTGA 6 cut(s) 87, 281, 882, 1412, 1436, 1536
AvaI CYCGRG 1 cut(s) 1866
AvaII GGWCC 2 cut(s) 351, 1556
AxyI CCTNAGG 1 cut(s) 256
BaeGI GKGCMC 3 cut(s) 654, 1720, 2324
BaeI ACNNNNGTAYC 4 cut(s) 1290, 1323, 1646, 1679
BalI TGGCCA 1 cut(s) 753
BanII GRGCYC 1 cut(s) 1861
BbrPI CACGTG 1 cut(s) 1643
BbsI GAAGAC 2 cut(s) 307, 1016
BbvI GCAGC 1 cut(s) 1735
BccI CCATC 1 cut(s) 1318
BciT130I CCWGG 4 cut(s) 656, 1317, 1483, 1919
BciVI GTATCC 1 cut(s) 1228
BcnI CCSGG 1 cut(s) 1862
BcoDI GTCTC 5 cut(s) 326, 1451, 1836, 1984, 2009
BfaI CTAG 6 cut(s) 324, 1619, 1709, 1755, 1926, 1982
BfmI CTRYAG 5 cut(s) 88, 552, 1649, 1721, 2178
BfuAI ACCTGC 2 cut(s) 1544, 1555
BfuI GTATCC 1 cut(s) 1228
BglI GCCNNNNNGGC 1 cut(s) 599
BisI GCNGC 2 cut(s) 1551, 1724
BlsI GCNGC 2 cut(s) 1552, 1725
Bme1390I CCNGG 5 cut(s) 656, 1317, 1483, 1862, 1919
Bme18I GGWCC 2 cut(s) 351, 1556
BmeT110I CYCGRG 1 cut(s) 1866
BmgT120I GGNCC 3 cut(s) 152, 351, 1556
BmiI GGNNCC 8 cut(s) 253, 262, 352, 1558, 1674, 1789, 1858, 1923
BmrFI CCNGG 5 cut(s) 656, 1317, 1483, 1862, 1919
BmrI ACTGGG 4 cut(s) 457, 1248, 1813, 2318
BmsI GCATC 5 cut(s) 712, 862, 1073, 1174, 2182
BmuI ACTGGG 4 cut(s) 457, 1248, 1813, 2318
BpiI GAAGAC 2 cut(s) 307, 1016
BpmI CTGGAG 1 cut(s) 1126
Bpu10I CCTNAGC 2 cut(s) 603, 1605
BpuEI CTTGAG 1 cut(s) 495
BpuMI CCSGG 1 cut(s) 1862
Bsa29I ATCGAT 2 cut(s) 18, 2292
BsaAI YACGTR 1 cut(s) 1643
BsaBI GATNNNNATC 1 cut(s) 1704
BsaI GGTCTC 1 cut(s) 326
BsaJI CCNNGG 7 cut(s) 155, 654, 655, 714, 1570, 1860, 2297
BsaWI WCCGGW 1 cut(s) 353
BsaXI ACNNNNNCTCC 4 cut(s) 1342, 1372, 2232, 2262
Bsc4I CCNNNNNNNGG 4 cut(s) 311, 1553, 1682, 2237
Bse118I RCCGGY 1 cut(s) 525
Bse1I ACTGG 6 cut(s) 463, 882, 1243, 1520, 1819, 2324
Bse21I CCTNAGG 1 cut(s) 256
Bse8I GATNNNNATC 1 cut(s) 1704
BseBI CCWGG 4 cut(s) 656, 1317, 1483, 1919
BseCI ATCGAT 2 cut(s) 18, 2292
BseDI CCNNGG 7 cut(s) 155, 654, 655, 714, 1570, 1860, 2297
BseGI GGATG 4 cut(s) 1088, 1329, 1478, 2035
BseJI GATNNNNATC 1 cut(s) 1704
BseLI CCNNNNNNNGG 4 cut(s) 311, 1553, 1682, 2237
BseMII CTCAG 7 cut(s) 270, 672, 1152, 1302, 1443, 1446, 1511
BseNI ACTGG 6 cut(s) 463, 882, 1243, 1520, 1819, 2324
BseRI GAGGAG 4 cut(s) 244, 1745, 1864, 1869
BseSI GKGCMC 3 cut(s) 654, 1720, 2324
BseXI GCAGC 1 cut(s) 1735
BseYI CCCAGC 1 cut(s) 1874
Bsh1236I CGCG 1 cut(s) 1117
BshFI GGCC 3 cut(s) 154, 753, 1519
BshVI ATCGAT 2 cut(s) 18, 2292
BsiHKCI CYCGRG 1 cut(s) 1866
BsiSI CCGG 4 cut(s) 354, 526, 1191, 1862
BslFI GGGAC 2 cut(s) 364, 1542
BslI CCNNNNNNNGG 4 cut(s) 311, 1553, 1682, 2237
BsmAI GTCTC 5 cut(s) 326, 1451, 1836, 1984, 2009
BsmBI CGTCTC 1 cut(s) 1836
BsmFI GGGAC 2 cut(s) 364, 1542
BsmI GAATGC 4 cut(s) 289, 1409, 1741, 1801
BsnI GGCC 3 cut(s) 154, 753, 1519
Bso31I GGTCTC 1 cut(s) 326
BsoBI CYCGRG 1 cut(s) 1866
Bsp1286I GDGCHC 4 cut(s) 654, 1720, 1861, 2324
Bsp143I GATC 7 cut(s) 581, 670, 1138, 1273, 1978, 2293, 2340
Bsp19I CCATGG 2 cut(s) 714, 2297
BspACI CCGC 5 cut(s) 875, 1551, 1726, 2074, 2139
BspANI GGCC 3 cut(s) 154, 753, 1519
BspCNI CTCAG 7 cut(s) 269, 673, 1153, 1303, 1442, 1447, 1510
BspDI ATCGAT 2 cut(s) 18, 2292
BspFNI CGCG 1 cut(s) 1117
BspHI TCATGA 1 cut(s) 1666
BspLI GGNNCC 8 cut(s) 253, 262, 352, 1558, 1674, 1789, 1858, 1923
BspMAI CTGCAG 2 cut(s) 1653, 1725
BspMI ACCTGC 2 cut(s) 1544, 1555
BspPI GGATC 4 cut(s) 576, 1133, 1986, 2288
BspQI GCTCTTC 1 cut(s) 726
BspTNI GGTCTC 1 cut(s) 326
BsrFI RCCGGY 1 cut(s) 525
BsrI ACTGG 6 cut(s) 463, 882, 1243, 1520, 1819, 2324
BssAI RCCGGY 1 cut(s) 525
BssECI CCNNGG 7 cut(s) 155, 654, 655, 714, 1570, 1860, 2297
BssMI GATC 7 cut(s) 581, 670, 1138, 1273, 1978, 2293, 2340
BssT1I CCWWGG 4 cut(s) 155, 714, 1570, 2297
Bst2UI CCWGG 4 cut(s) 656, 1317, 1483, 1919
Bst6I CTCTTC 2 cut(s) 726, 921
BstAPI GCANNNNNTGC 1 cut(s) 1771
BstBAI YACGTR 1 cut(s) 1643
BstC8I GCNNGC 1 cut(s) 2267
BstDEI CTNAG 9 cut(s) 256, 603, 681, 1161, 1311, 1429, 1455, 1497, 1605
BstDSI CCRYGG 2 cut(s) 714, 2297
BstENI CCTNNNNNAGG 1 cut(s) 1551
BstF5I GGATG 4 cut(s) 1088, 1329, 1478, 2035
BstFNI CGCG 1 cut(s) 1117
BstKTI GATC 7 cut(s) 584, 673, 1141, 1276, 1981, 2296, 2343
BstMAI GTCTC 5 cut(s) 326, 1451, 1836, 1984, 2009
BstMBI GATC 7 cut(s) 581, 670, 1138, 1273, 1978, 2293, 2340
BstMWI GCNNNNNNNGC 6 cut(s) 599, 682, 709, 872, 1771, 2328
BstNI CCWGG 4 cut(s) 656, 1317, 1483, 1919
BstNSI RCATGY 2 cut(s) 1064, 2062
BstSCI CCNGG 5 cut(s) 654, 1315, 1481, 1860, 1917
BstSFI CTRYAG 5 cut(s) 88, 552, 1649, 1721, 2178
BstSLI GKGCMC 3 cut(s) 654, 1720, 2324
BstUI CGCG 1 cut(s) 1117
BstV1I GCAGC 1 cut(s) 1735
BstV2I GAAGAC 2 cut(s) 307, 1016
BstX2I RGATCY 3 cut(s) 581, 1138, 1978
BstYI RGATCY 3 cut(s) 581, 1138, 1978
Bsu15I ATCGAT 2 cut(s) 18, 2292
Bsu36I CCTNAGG 1 cut(s) 256
BsuI GTATCC 1 cut(s) 1228
BsuRI GGCC 3 cut(s) 154, 753, 1519
BsuTUI ATCGAT 2 cut(s) 18, 2292
BtgI CCRYGG 2 cut(s) 714, 2297
BtsCI GGATG 4 cut(s) 1088, 1329, 1478, 2035
BtsI GCAGTG 2 cut(s) 315, 1718
BtsIMutI CAGTG 6 cut(s) 315, 754, 889, 921, 1192, 1718
BveI ACCTGC 2 cut(s) 1544, 1555
Cac8I GCNNGC 1 cut(s) 2267
CciI TCATGA 1 cut(s) 1666
Cfr10I RCCGGY 1 cut(s) 525
Cfr13I GGNCC 3 cut(s) 152, 351, 1556
ClaI ATCGAT 2 cut(s) 18, 2292
CseI GACGC 1 cut(s) 381
Csp6I GTAC 4 cut(s) 624, 906, 1113, 2183
CspCI CAANNNNNGTGG 2 cut(s) 897, 932
CviQI GTAC 4 cut(s) 624, 906, 1113, 2183
DdeI CTNAG 9 cut(s) 256, 603, 681, 1161, 1311, 1429, 1455, 1497, 1605
DpnI GATC 7 cut(s) 583, 672, 1140, 1275, 1980, 2295, 2342
DpnII GATC 7 cut(s) 581, 670, 1138, 1273, 1978, 2293, 2340
EaeI YGGCCR 1 cut(s) 751
Eam1104I CTCTTC 2 cut(s) 726, 921
EarI CTCTTC 2 cut(s) 726, 921
Eco130I CCWWGG 4 cut(s) 155, 714, 1570, 2297
Eco24I GRGCYC 1 cut(s) 1861
Eco31I GGTCTC 1 cut(s) 326
Eco47I GGWCC 2 cut(s) 351, 1556
Eco57I CTGAAG 3 cut(s) 945, 2054, 2220
Eco72I CACGTG 1 cut(s) 1643
Eco81I CCTNAGG 1 cut(s) 256
Eco88I CYCGRG 1 cut(s) 1866
EcoNI CCTNNNNNAGG 1 cut(s) 1551
EcoO109I RGGNCCY 1 cut(s) 1556
EcoRI GAATTC 2 cut(s) 139, 1279
EcoRII CCWGG 4 cut(s) 654, 1315, 1481, 1917
EcoT14I CCWWGG 4 cut(s) 155, 714, 1570, 2297
EcoT38I GRGCYC 1 cut(s) 1861
ErhI CCWWGG 4 cut(s) 155, 714, 1570, 2297
Esp3I CGTCTC 1 cut(s) 1836
FaqI GGGAC 2 cut(s) 364, 1542
FauI CCCGC 2 cut(s) 1719, 2067
FauNDI CATATG 1 cut(s) 895
Fnu4HI GCNGC 2 cut(s) 1551, 1724
FokI GGATG 4 cut(s) 1095, 1336, 1465, 2042
FriOI GRGCYC 1 cut(s) 1861
Fsp4HI GCNGC 2 cut(s) 1551, 1724
FspBI CTAG 6 cut(s) 324, 1619, 1709, 1755, 1926, 1982
GluI GCNGC 2 cut(s) 1551, 1724
GsaI CCCAGC 1 cut(s) 1878
GsuI CTGGAG 1 cut(s) 1126
HaeIII GGCC 3 cut(s) 154, 753, 1519
HapII CCGG 4 cut(s) 354, 526, 1191, 1862
HgaI GACGC 1 cut(s) 381
HindIII AAGCTT 3 cut(s) 358, 2007, 2205
HinfI GANTC 9 cut(s) 71, 171, 744, 1154, 1427, 1486, 1595, 1903, 1948
HpaII CCGG 4 cut(s) 354, 526, 1191, 1862
HphI GGTGA 6 cut(s) 87, 281, 882, 1412, 1436, 1536
Hpy166II GTNNAC 4 cut(s) 95, 890, 1261, 1646
Hpy188III TCNNGA 8 cut(s) 258, 434, 585, 1080, 1340, 1667, 1982, 2222
Hpy8I GTNNAC 4 cut(s) 95, 890, 1261, 1646
Hpy99I CGWCG 2 cut(s) 397, 1341
HpyAV CCTTC 8 cut(s) 984, 1241, 1337, 1341, 1755, 1851, 1938, 1977
HpyCH4IV ACGT 4 cut(s) 1336, 1412, 1642, 1748
HpyF10VI GCNNNNNNNGC 6 cut(s) 599, 682, 709, 872, 1771, 2328
HpyF3I CTNAG 9 cut(s) 256, 603, 681, 1161, 1311, 1429, 1455, 1497, 1605
HpySE526I ACGT 4 cut(s) 1336, 1412, 1642, 1748
Kzo9I GATC 7 cut(s) 581, 670, 1138, 1273, 1978, 2293, 2340
LguI GCTCTTC 1 cut(s) 726
LmnI GCTCC 4 cut(s) 257, 1793, 1856, 1927
Lsp1109I GCAGC 1 cut(s) 1735
LweI GCATC 5 cut(s) 712, 862, 1073, 1174, 2182
MaeI CTAG 6 cut(s) 324, 1619, 1709, 1755, 1926, 1982
MaeII ACGT 4 cut(s) 1336, 1412, 1642, 1748
MaeIII GTNAC 7 cut(s) 455, 465, 919, 1424, 1542, 1821, 1896
MalI GATC 7 cut(s) 583, 672, 1140, 1275, 1980, 2295, 2342
MboI GATC 7 cut(s) 581, 670, 1138, 1273, 1978, 2293, 2340
MflI RGATCY 3 cut(s) 581, 1138, 1978
MhlI GDGCHC 4 cut(s) 654, 1720, 1861, 2324
MlsI TGGCCA 1 cut(s) 753
MluI ACGCGT 1 cut(s) 1115
MluNI TGGCCA 1 cut(s) 753
MlyI GAGTC 3 cut(s) 753, 1421, 1912
MmeI TCCRAC 3 cut(s) 1395, 2014, 2255
Mox20I TGGCCA 1 cut(s) 753
MroXI GAANNNNTTC 3 cut(s) 265, 2247, 2314
MscI TGGCCA 1 cut(s) 753
MseI TTAA 6 cut(s) 243, 387, 440, 1182, 1995, 2160
MslI CAYNNNNRTG 1 cut(s) 861
Msp20I TGGCCA 1 cut(s) 753
MspA1I CMGCKG 2 cut(s) 1726, 2074
MspI CCGG 4 cut(s) 354, 526, 1191, 1862
MspR9I CCNGG 5 cut(s) 656, 1317, 1483, 1862, 1919
Mva1269I GAATGC 4 cut(s) 289, 1409, 1741, 1801
MvaI CCWGG 4 cut(s) 656, 1317, 1483, 1919
MvnI CGCG 1 cut(s) 1117
MwoI GCNNNNNNNGC 6 cut(s) 599, 682, 709, 872, 1771, 2328
NciI CCSGG 1 cut(s) 1862
NcoI CCATGG 2 cut(s) 714, 2297
NdeI CATATG 1 cut(s) 895
NdeII GATC 7 cut(s) 581, 670, 1138, 1273, 1978, 2293, 2340
NlaIV GGNNCC 8 cut(s) 253, 262, 352, 1558, 1674, 1789, 1858, 1923
NmuCI GTSAC 5 cut(s) 455, 919, 1424, 1542, 1821
NspI RCATGY 2 cut(s) 1064, 2062
PaeR7I CTCGAG 1 cut(s) 1866
PagI TCATGA 1 cut(s) 1666
PaqCI CACCTGC 1 cut(s) 1555
PasI CCCWGGG 1 cut(s) 655
PciI ACATGT 2 cut(s) 1060, 2058
PciSI GCTCTTC 1 cut(s) 726
PctI GAATGC 4 cut(s) 289, 1409, 1741, 1801
PdmI GAANNNNTTC 3 cut(s) 265, 2247, 2314
PfeI GAWTC 6 cut(s) 71, 171, 1154, 1486, 1595, 1948
PflFI GACNNNGTC 1 cut(s) 1335
PflMI CCANNNNNTGG 1 cut(s) 2237
PfoI TCCNGGA 1 cut(s) 1481
PkrI GCNGC 2 cut(s) 1552, 1725
PleI GAGTC 3 cut(s) 752, 1421, 1911
PmaCI CACGTG 1 cut(s) 1643
PmlI CACGTG 1 cut(s) 1643
PpsI GAGTC 3 cut(s) 752, 1421, 1911
Ppu21I YACGTR 1 cut(s) 1643
PpuMI RGGWCCY 1 cut(s) 1556
PscI ACATGT 2 cut(s) 1060, 2058
PshBI ATTAAT 1 cut(s) 2160
Psp5II RGGWCCY 1 cut(s) 1556
Psp6I CCWGG 4 cut(s) 654, 1315, 1481, 1917
PspCI CACGTG 1 cut(s) 1643
PspFI CCCAGC 1 cut(s) 1874
PspGI CCWGG 4 cut(s) 654, 1315, 1481, 1917
PspN4I GGNNCC 8 cut(s) 253, 262, 352, 1558, 1674, 1789, 1858, 1923
PspPI GGNCC 3 cut(s) 152, 351, 1556
PspPPI RGGWCCY 1 cut(s) 1556
PspXI VCTCGAGB 1 cut(s) 1866
PstI CTGCAG 2 cut(s) 1653, 1725
PsuI RGATCY 3 cut(s) 581, 1138, 1978
PsyI GACNNNGTC 1 cut(s) 1335
RsaI GTAC 4 cut(s) 625, 907, 1114, 2184
RsaNI GTAC 4 cut(s) 624, 906, 1113, 2183
RseI CAYNNNNRTG 1 cut(s) 861
SapI GCTCTTC 1 cut(s) 726
SaqAI TTAA 6 cut(s) 243, 387, 440, 1182, 1995, 2160
SatI GCNGC 2 cut(s) 1551, 1724
Sau3AI GATC 7 cut(s) 581, 670, 1138, 1273, 1978, 2293, 2340
Sau96I GGNCC 3 cut(s) 152, 351, 1556
SchI GAGTC 3 cut(s) 753, 1421, 1912
ScrFI CCNGG 5 cut(s) 656, 1317, 1483, 1862, 1919
SduI GDGCHC 4 cut(s) 654, 1720, 1861, 2324
SfaNI GCATC 5 cut(s) 712, 862, 1073, 1174, 2182
SfcI CTRYAG 5 cut(s) 88, 552, 1649, 1721, 2178
Sfr274I CTCGAG 1 cut(s) 1866
SinI GGWCC 2 cut(s) 351, 1556
SlaI CTCGAG 1 cut(s) 1866
SmiMI CAYNNNNRTG 1 cut(s) 861
SmlI CTYRAG 2 cut(s) 510, 1866
SmoI CTYRAG 2 cut(s) 510, 1866
SsiI CCGC 5 cut(s) 875, 1551, 1726, 2074, 2139
SspI AATATT 3 cut(s) 850, 1039, 1797
SspMI CTAG 6 cut(s) 324, 1619, 1709, 1755, 1926, 1982
StyD4I CCNGG 5 cut(s) 654, 1315, 1481, 1860, 1917
StyI CCWWGG 4 cut(s) 155, 714, 1570, 2297
TaiI ACGT 4 cut(s) 1339, 1415, 1645, 1751
TaqI TCGA 6 cut(s) 18, 870, 1867, 2065, 2292, 2339
TatI WGTACW 2 cut(s) 623, 2182
TauI GCSGC 1 cut(s) 1553
TfiI GAWTC 6 cut(s) 71, 171, 1154, 1486, 1595, 1948
Tru1I TTAA 6 cut(s) 243, 387, 440, 1182, 1995, 2160
Tru9I TTAA 6 cut(s) 243, 387, 440, 1182, 1995, 2160
TscAI CASTG 6 cut(s) 315, 754, 889, 928, 1192, 1725
TseFI GTSAC 5 cut(s) 455, 919, 1424, 1542, 1821
TseI GCWGC 1 cut(s) 1723
Tsp45I GTSAC 5 cut(s) 455, 919, 1424, 1542, 1821
TspDTI ATGAA 9 cut(s) 195, 258, 333, 713, 998, 1011, 1440, 1601, 1716
TspGWI ACGGA 1 cut(s) 1915
TspRI CASTG 6 cut(s) 315, 754, 889, 928, 1192, 1725
Tth111I GACNNNGTC 1 cut(s) 1335
Van91I CCANNNNNTGG 1 cut(s) 2237
VpaK11BI GGWCC 2 cut(s) 351, 1556
VspI ATTAAT 1 cut(s) 2160
XagI CCTNNNNNAGG 1 cut(s) 1551
XapI RAATTY 2 cut(s) 139, 1279
XbaI TCTAGA 1 cut(s) 1981
XceI RCATGY 2 cut(s) 1064, 2062
XhoI CTCGAG 1 cut(s) 1866
XmnI GAANNNNTTC 3 cut(s) 265, 2247, 2314
XspI CTAG 6 cut(s) 324, 1619, 1709, 1755, 1926, 1982
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.