Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb4

Orthogroup ID

OG0003981

Physical Location & Seq

Genomic Coordinates Reverse (-)

1434230 .. 1445026

Gene Structure 10797 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_4g01630.t7

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2979 bp

ATGCCTATCAGGAAAATGAAGGAGAGCTCAGAGCAACACCTTGTGATCAAAACCCATATACAGAACTCAGCAAACCCAGTTCAGAAGGCACCCAAAACTGCCCAAAATGGCAAAGGCCCACCAACCCCAGAACCTCAAAACCCCAAAACTCAGAACCAAACTTCACCTCCAACTAAGAACAGAGGAAGGAGAAGGGGTAGAGGTGGTCGAAAGTCCGATCAAGGCGATGTTTTTATGAGGCCTAGTTCACGACACTGCACAGTGGCTCATATTCCAGCCTTACCAAACCTGGCTGGAGGAGGTCCTATTGTTACTACTACAAATGGCTCATTGGAAAATGGTGGGAATTCATGTGCCATGGAGATGGGTTTCCCCACTTCCAGCAAGTCTTTGAGCTTTGCACCTCGGCCTGGTTATGGACAAGCTGGAATAAAGTGTGTTGTAAAGGCCAACCATTTCTTTGCAGAGTTACCAGACAAGGACTTGAACCATTATGATGTTAGCATAACTCCCGAAGTTACTTCTAGAGTTGTGAACAGAGCTATCATGGCGGAACTGGTGAGACTGTACAGAGAATCTGACCTAGGAATGAGACTGCCTGCTTATGATGGTAGAAAGAGTCTGTACACTGCTGGTGAGCTACCCTTTGTTTGGAAGGAGTTTAACATCAAGCTTAGTGATGAAGAAGAGCGAATTGATGGCCGAAAAAGAGAAAGGGAATATAAAGTGGTGATTAAATTTGTTGCTCGAGCAAACATGTATCATTTGAGCCAGTTTCTGGCCGGTAAATGTGCTGATGCTCCCCAGGAGGCTCTCCAAATTCTTGACATTGTTTTAAGAGAGCTCTCAGCAAAAAGGTACTGTCCCATTGGAAGATCTTTTTTTTCACCTAATATCCGAACACCACAACGGCTTGGTGAGGGGTTGGAGTCATGGTGTGGGTTTTACCAAAGTATAAGGCCTACCCAAATGGGTCTCTCCCTCAATGTTGATATGGCTTCAGCTGCATTTATTGAGCCTCTCCCTGTAATAGAGTTTGTGGCCCAGCTTCTGGGAAAAGATGTTCTATCTAGGACATTGTCTGATGCTGACCGTGTAAAGATTAAGAAGGCTCTTAGAGGGGTGAAAGTTGAAGTTACCCACAGAGGAAGTGTTCGAAGAAAGTATCGAGTGTCAGGACTGACATCTCAACCTACAAGAGAGCTAGTGTTTCCTGTTGATGAGAACTCGACGATGAAATCTGTAATTGAATACTTCCAGGAGATGTATGGCTTTACAATTCAACATGGACATCTTCCTTGCCTTCAAGTTGGCGGAAATCAGAAGAAGGCAAATTATTTACCAATGGAGGCCTGTAAAATTGTTGAGGGGCAACGATATACAAAAAGGTTGAATGAGAAACAAATTACTGCTCTTTTAAAAGTTACATGTCAAAGGCCTAGGGATCGTGAAAATGATATCCTCCAGACCGTTCAACAGAATGCTTATGACCAAGACCCTTATGCTAATGAGTTTGGGATCAAAATCAGTGAAAAGCTCGCTTCAGTTGAGGCTCGAATTCTTCCAGCCCCTTGGCTGAAGTATCATGAAACAGGAAAAGAAAAGAATTGTTTGCCTCAAGTAGGTCAGTGGAATATGATGAACAAGAAAATGATCAATGGGATGCCAGTTAGCCGGTGGGCTTGTATTAACTTCTCACGGAGTGTGCAAGAGAGTGTTGCTCGTGGATTTTGTAGTGAACTTGGTCAGATGTGTCAAGTATCTGGCATGGAATTTAATCCAGAACCTGTAATTCCAATCTACAATGCCAGGCCTGAGCAAGTAGAGAAAGCTCTAAAGCATGTATATCATGCATCCATGAACAAAACAAAAGGAAAAGAACTAGAGCTCTTATTGGCTATTTTGCCTGACAACAATGGGTCCCTGTATGGTGATATCAAGCGAATATGTGAAACAGATCTTGGATTAATCTCGCAATGCTGTCTTACAAAGCACGTTTTCAAGATTAGCAAACAGTATTTGGCTAATGTGTCCCTGAAGATAAATGTTAAGATGGGTGGCAGAAACACTGTACTTTTGGATGCCATCAGCTGCAGGATACCTTTAGTCAGTGATATACCAACCATAATTTTCGGAGCAGATGTGACTCACCCGGAGAATGGAGAAGACACCAGTCCCTCTATTGCTGCGGTAGTGGCTTCCCAGGATTGGCCGGAAGTGACCAAATATGCTGGGTTAGTTTGTGCTCAACCTCACAGACAGGAACTGATACAAGATTTGTACAAGACATGGCAGGACCCTGTTCGTGGCACAGTCAGTGGCGGCATGATTCGGGATCTTTTGGTTTCCTTTAGGAAAGCGACAGGGCAGAAGCCTCTCAGGATTATATTTTACAGGGATGGCGTAAGTGAAGGGCAATTTTATCAAGTCTTACTTTATGAGCTTGATGCGATTAGGAAGGCATGTGCTTCTCTGGAACCCAACTATCAACCGCCAGTGACTTTCATTATAGTACAAAAGCGGCACCACACACGATTATTTGCCAATAACCATAGGGACAGGAGCAGTGTAGATAAGAGCGGCAACATACTGCCTGGCACTGTGGTTGATACCAAGATATGCCATCCTACAGAATTTGATTTCTATCTCTGCAGCCATGCTGGTATACAGGGGACAAGCCGGCCGGCTCACTACCATGTTCTCTGGGATGAGAATAATTTTACTCCTGATGGAATCCAGTCGTTGACAAACAATCTTTGCTACACATATGCAAGGTGCACCCGCTCCGTGTCTGTTGTACCTCCGGTATATTATGCACATTTGGCTGCTTTCCGTGCTCGATTTTATATGGGGCCAGATCTGCAGGAAAATGGCTCTATTGGTCATGCTGGTAAGGGCACACGGACTGCAGGAGAGTCTGGAGTCCGGCCATTGCCAGCTTTAAAGGAGAATGTAAAGAGAGTAATGTTTTATTGTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002252 GO:0002376 GO:0003674 GO:0003676 GO:0003723 GO:0005488 GO:0006139 GO:0006725 GO:0006807 GO:0006950 GO:0006952 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009615 GO:0009987 GO:0010586 GO:0016070 GO:0019827 GO:0032501 GO:0032502 GO:0034641 GO:0034660 GO:0035019 GO:0035198 GO:0043170 GO:0043207 GO:0044237 GO:0044238 GO:0046483 GO:0048509 GO:0050789 GO:0050793 GO:0050896 GO:0051607 GO:0051704 GO:0051707 GO:0061980 GO:0065007 GO:0071704 GO:0090304 GO:0097159 GO:0098542 GO:0098727 GO:1901360 GO:1901363 GO:1902183

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ArgoL1 ArgoL2 ArgoMid ArgoN PAZ Piwi

Protein Analysis

993

Amino Acids

111.18

Weight (kDa)

9.29

Isoelectric Point (pI)

45.46

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ArgoN	PF16486	145 - 279	3.3e-35	N-terminal domain of argonaute
ArgoL1	PF08699	289 - 339	3.3e-19	Argonaute linker 1 domain
PAZ	PF02170	363 - 472	2.5e-28	PAZ domain
ArgoL2	PF16488	482 - 528	1e-16	Argonaute linker 2 domain
ArgoMid	PF16487	539 - 616	1.3e-14	Mid domain of argonaute
Piwi	PF02171	631 - 949	1.5e-116	Piwi domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0003981)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G43810 AT5G43810 AT5G43810 AT5G43810
fragaria_vesca	FvH4_4g01630 FvH4_4g01630 FvH4_4g01630 FvH4_4g01630 FvH4_4g01630 FvH4_4g01630 FvH4_4g01630
malus_domestica	MD13G1201400.v1.1 MD16G1201200.v1.1
prunus_persica	Prupe.1G022900_v2.0.a1 Prupe.1G022900_v2.0.a1
pyrus_communis	pycom13g17460 pycom16g16970
rosa_chinensis	RchiOBHm_Chr4g0388221 RchiOBHm_Chr4g0388231
rosa_laevigata	RLG00000010073
rosa_roxburghii	Rroxscaffold_5G00334710
rosa_rugosa	Rorug03G0316100 Rorug03G0316200 Rorug03G0316300 Rorug03G0316300 Rorug03G0316300 Rorug03G0316300 Rorug03G0316400
rosa_samantha	Rh4AG021700 Rh4BG015800 Rh4CG021900 Rh4DG016600
rosa_wichuraiana	Rw4G001420

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	88, 2523
AccB7I	CCANNNNNTGG	2 cut(s)	778, 1051
AccBSI	CCGCTC	2 cut(s)	2580, 2784
AccI	GTMKAC	1 cut(s)	2665
AciI	CCGC	8 cut(s)	551, 1314, 2189, 2322, 2492, 2521, 2580, 2782
AclWI	GGATC	3 cut(s)	1452, 1526, 2343
AcoI	YGGCCR	5 cut(s)	700, 780, 2210, 2681, 2927
AcsI	RAATTY	6 cut(s)	346, 737, 819, 1557, 1772, 2633
AcuI	CTGAAG	4 cut(s)	984, 1527, 1598, 2057
AdeI	CACNNNGTG	2 cut(s)	43, 1703
AfaI	GTAC	7 cut(s)	569, 626, 860, 2073, 2282, 2514, 2799
AfiI	CCNNNNNNNGG	9 cut(s)	410, 416, 651, 778, 1051, 1622, 2159, 2208, 2306
AflIII	ACRYGT	2 cut(s)	756, 1427
AgsI	TTSAA	8 cut(s)	487, 1133, 1250, 1283, 1307, 1393, 1475, 2002
AjnI	CCWGG	7 cut(s)	288, 409, 804, 1257, 1808, 2202, 2593
AjuI	GAANNNNNNNTTGG	2 cut(s)	1944, 1976
AloI	GAACNNNNNNTCC	2 cut(s)	1047, 1079
Alw21I	GWGCWC	6 cut(s)	29, 846, 1890, 2248, 2780, 2839
Alw26I	GTCTC	3 cut(s)	556, 586, 980
Alw44I	GTGCAC	1 cut(s)	2776
AlwI	GGATC	3 cut(s)	1452, 1526, 2343
AlwNI	CAGNNNCTG	4 cut(s)	778, 1051, 1787, 2266
Ama87I	CYCGRG	1 cut(s)	747
ApaLI	GTGCAC	1 cut(s)	2776
ApeKI	GCWGC	5 cut(s)	1004, 2091, 2186, 2652, 2825
ApoI	RAATTY	6 cut(s)	346, 737, 819, 1557, 1772, 2633
AseI	ATTAAT	1 cut(s)	1967
AspA2I	CCTAGG	2 cut(s)	583, 1439
AspS9I	GGNCC	6 cut(s)	116, 302, 1042, 1920, 2296, 2852
AsuC2I	CCSGG	1 cut(s)	2153
AsuHPI	GGTGA	9 cut(s)	156, 571, 647, 742, 879, 929, 1135, 1943, 2141
AsuII	TTCGAA	1 cut(s)	1156
AvaI	CYCGRG	1 cut(s)	747
AvaII	GGWCC	3 cut(s)	302, 1920, 2296
AvrII	CCTAGG	2 cut(s)	583, 1439
BaeGI	GKGCMC	2 cut(s)	2780, 2900
BanI	GGYRCC	2 cut(s)	88, 2523
BanII	GRGCYC	3 cut(s)	29, 846, 1890
BauI	CACGAG	1 cut(s)	1722
BbsI	GAAGAC	1 cut(s)	2172
Bbv12I	GWGCWC	6 cut(s)	29, 846, 1890, 2248, 2780, 2839
BbvI	GCAGC	5 cut(s)	991, 2078, 2173, 2664, 2812
BccI	CCATC	8 cut(s)	358, 602, 692, 2047, 2093, 2393, 2631, 2723
BceAI	ACGGC	1 cut(s)	926
BciT130I	CCWGG	7 cut(s)	290, 411, 806, 1259, 1810, 2204, 2595
BciVI	GTATCC	1 cut(s)	2091
BclI	TGATCA	2 cut(s)	45, 1653
BcnI	CCSGG	1 cut(s)	2153
BcoDI	GTCTC	3 cut(s)	556, 586, 980
BfaI	CTAG	7 cut(s)	243, 525, 584, 1071, 1205, 1440, 1883
BfmI	CTRYAG	5 cut(s)	2092, 2628, 2650, 2861, 2907
BfuI	GTATCC	1 cut(s)	2091
BglII	AGATCT	3 cut(s)	875, 1957, 2857
BisI	GCNGC	8 cut(s)	1005, 2092, 2187, 2323, 2522, 2581, 2653, 2826
BlnI	CCTAGG	2 cut(s)	583, 1439
BlsI	GCNGC	8 cut(s)	1006, 2093, 2188, 2324, 2523, 2582, 2654, 2827
Bme1390I	CCNGG	8 cut(s)	290, 411, 806, 1259, 1810, 2153, 2204, 2595
Bme18I	GGWCC	3 cut(s)	302, 1920, 2296
BmeT110I	CYCGRG	1 cut(s)	747
BmgT120I	GGNCC	6 cut(s)	116, 302, 1042, 1920, 2296, 2852
BmiI	GGNNCC	7 cut(s)	90, 1921, 1922, 2298, 2478, 2525, 2853
BmrFI	CCNGG	8 cut(s)	290, 411, 806, 1259, 1810, 2153, 2204, 2595
BmrI	ACTGGG	1 cut(s)	71
BmsI	GCATC	6 cut(s)	787, 1075, 1653, 1862, 2071, 2437
BmuI	ACTGGG	1 cut(s)	71
BoxI	GACNNNNGTC	1 cut(s)	2172
BpiI	GAAGAC	1 cut(s)	2172
BplI	GAGNNNNNCTC	2 cut(s)	1705, 1737
BpmI	CTGGAG	3 cut(s)	315, 1448, 2940
Bpu10I	CCTNAGC	1 cut(s)	1815
Bpu14I	TTCGAA	1 cut(s)	1156
BpuEI	CTTGAG	1 cut(s)	1602
BpuMI	CCSGG	1 cut(s)	2153
BsaBI	GATNNNNATC	2 cut(s)	1523, 2643
BsaI	GGTCTC	1 cut(s)	980
BsaJI	CCNNGG	7 cut(s)	357, 404, 583, 804, 1439, 1571, 2202
BsaWI	WCCGGW	1 cut(s)	2803
BsaXI	ACNNNNNCTCC	8 cut(s)	151, 181, 181, 211, 920, 950, 2127, 2157
Bsc4I	CCNNNNNNNGG	9 cut(s)	410, 416, 651, 778, 1051, 1622, 2159, 2208, 2306
Bse118I	RCCGGY	4 cut(s)	782, 1674, 2679, 2683
Bse1I	ACTGG	7 cut(s)	77, 561, 772, 1667, 2172, 2495, 2737
Bse3DI	GCAATG	2 cut(s)	1982, 2930
Bse8I	GATNNNNATC	2 cut(s)	1523, 2643
BseBI	CCWGG	7 cut(s)	290, 411, 806, 1259, 1810, 2204, 2595
BseDI	CCNNGG	7 cut(s)	357, 404, 583, 804, 1439, 1571, 2202
BseGI	GGATG	6 cut(s)	1668, 1853, 2086, 2404, 2623, 2713
BseJI	GATNNNNATC	2 cut(s)	1523, 2643
BseLI	CCNNNNNNNGG	9 cut(s)	410, 416, 651, 778, 1051, 1622, 2159, 2208, 2306
BseMI	GCAATG	2 cut(s)	1982, 2930
BseMII	CTCAG	6 cut(s)	42, 81, 164, 861, 1806, 2392
BseNI	ACTGG	7 cut(s)	77, 561, 772, 1667, 2172, 2495, 2737
BseRI	GAGGAG	1 cut(s)	312
BseSI	GKGCMC	2 cut(s)	2780, 2900
BseX3I	CGGCCG	1 cut(s)	2681
BseXI	GCAGC	5 cut(s)	991, 2078, 2173, 2664, 2812
BseYI	CCCAGC	2 cut(s)	1044, 2231
BsgI	GTGCAG	1 cut(s)	241
Bsh1285I	CGRYCG	1 cut(s)	2684
BshNI	GGYRCC	2 cut(s)	88, 2523
BsiEI	CGRYCG	1 cut(s)	2684
BsiHKAI	GWGCWC	6 cut(s)	29, 846, 1890, 2248, 2780, 2839
BsiHKCI	CYCGRG	1 cut(s)	747
BsiSI	CCGG	8 cut(s)	783, 1675, 2153, 2213, 2680, 2684, 2804, 2926
BslFI	GGGAC	6 cut(s)	849, 1906, 2017, 2160, 2570, 2686
BslI	CCNNNNNNNGG	9 cut(s)	410, 416, 651, 778, 1051, 1622, 2159, 2208, 2306
BsmAI	GTCTC	3 cut(s)	556, 586, 980
BsmFI	GGGAC	6 cut(s)	849, 1906, 2017, 2160, 2570, 2686
BsmI	GAATGC	1 cut(s)	1486
Bso31I	GGTCTC	1 cut(s)	980
BsoBI	CYCGRG	1 cut(s)	747
Bsp119I	TTCGAA	1 cut(s)	1156
Bsp1286I	GDGCHC	7 cut(s)	29, 846, 1890, 2248, 2780, 2839, 2900
Bsp1407I	TGTACA	3 cut(s)	567, 624, 2280
Bsp143I	GATC	9 cut(s)	45, 217, 875, 1444, 1518, 1653, 1957, 2335, 2857
Bsp19I	CCATGG	1 cut(s)	357
BspACI	CCGC	8 cut(s)	551, 1314, 2189, 2322, 2492, 2521, 2580, 2782
BspCNI	CTCAG	6 cut(s)	41, 80, 163, 860, 1807, 2391
BspHI	TCATGA	1 cut(s)	1585
BspLI	GGNNCC	7 cut(s)	90, 1921, 1922, 2298, 2478, 2525, 2853
BspMAI	CTGCAG	4 cut(s)	2096, 2654, 2865, 2911
BspPI	GGATC	3 cut(s)	1452, 1526, 2343
BspQI	GCTCTTC	1 cut(s)	681
BspT104I	TTCGAA	1 cut(s)	1156
BspT107I	GGYRCC	2 cut(s)	88, 2523
BspTNI	GGTCTC	1 cut(s)	980
BsrBI	CCGCTC	2 cut(s)	2580, 2784
BsrDI	GCAATG	2 cut(s)	1982, 2930
BsrFI	RCCGGY	4 cut(s)	782, 1674, 2679, 2683
BsrGI	TGTACA	3 cut(s)	567, 624, 2280
BsrI	ACTGG	7 cut(s)	77, 561, 772, 1667, 2172, 2495, 2737
BssAI	RCCGGY	4 cut(s)	782, 1674, 2679, 2683
BssECI	CCNNGG	7 cut(s)	357, 404, 583, 804, 1439, 1571, 2202
BssMI	GATC	9 cut(s)	45, 217, 875, 1444, 1518, 1653, 1957, 2335, 2857
BssNAI	GTATAC	1 cut(s)	2666
BssSI	CACGAG	1 cut(s)	1722
BssT1I	CCWWGG	4 cut(s)	357, 583, 1439, 1571
Bst1107I	GTATAC	1 cut(s)	2666
Bst2BI	CACGAG	1 cut(s)	1722
Bst2UI	CCWGG	7 cut(s)	290, 411, 806, 1259, 1810, 2204, 2595
Bst4CI	ACNGT	9 cut(s)	262, 567, 863, 1094, 1471, 2016, 2071, 2314, 2602
Bst6I	CTCTTC	1 cut(s)	681
BstAUI	TGTACA	3 cut(s)	567, 624, 2280
BstBI	TTCGAA	1 cut(s)	1156
BstC8I	GCNNGC	5 cut(s)	600, 1539, 2681, 2685, 2937
BstDEI	CTNAG	9 cut(s)	28, 67, 150, 174, 674, 847, 1115, 1815, 2378
BstDSI	CCRYGG	1 cut(s)	357
BstENI	CCTNNNNNAGG	1 cut(s)	1620
BstF5I	GGATG	6 cut(s)	1668, 1853, 2086, 2404, 2623, 2713
BstKTI	GATC	9 cut(s)	48, 220, 878, 1447, 1521, 1656, 1960, 2338, 2860
BstMAI	GTCTC	3 cut(s)	556, 586, 980
BstMBI	GATC	9 cut(s)	45, 217, 875, 1444, 1518, 1653, 1957, 2335, 2857
BstMCI	CGRYCG	1 cut(s)	2684
BstMWI	GCNNNNNNNGC	6 cut(s)	548, 1004, 2195, 2822, 2834, 2860
BstNI	CCWGG	7 cut(s)	290, 411, 806, 1259, 1810, 2204, 2595
BstNSI	RCATGY	4 cut(s)	760, 1431, 1844, 2466
BstPAI	GACNNNNGTC	1 cut(s)	2172
BstSCI	CCNGG	8 cut(s)	288, 409, 804, 1257, 1808, 2151, 2202, 2593
BstSFI	CTRYAG	5 cut(s)	2092, 2628, 2650, 2861, 2907
BstSLI	GKGCMC	2 cut(s)	2780, 2900
BstV1I	GCAGC	5 cut(s)	991, 2078, 2173, 2664, 2812
BstV2I	GAAGAC	1 cut(s)	2172
BstX2I	RGATCY	4 cut(s)	875, 1957, 2335, 2857
BstXI	CCANNNNNNTGG	2 cut(s)	364, 1572
BstYI	RGATCY	4 cut(s)	875, 1957, 2335, 2857
BstZ17I	GTATAC	1 cut(s)	2666
BstZI	CGGCCG	1 cut(s)	2681
BsuI	GTATCC	1 cut(s)	2091
BtgI	CCRYGG	1 cut(s)	357
BtgZI	GCGATG	1 cut(s)	240
BtsCI	GGATG	6 cut(s)	1668, 1853, 2086, 2404, 2623, 2713
BtsI	GCAGTG	3 cut(s)	253, 627, 2572
Cac8I	GCNNGC	5 cut(s)	600, 1539, 2681, 2685, 2937
CaiI	CAGNNNCTG	4 cut(s)	778, 1051, 1787, 2266
CciI	TCATGA	1 cut(s)	1585
Cfr10I	RCCGGY	4 cut(s)	782, 1674, 2679, 2683
Cfr13I	GGNCC	6 cut(s)	116, 302, 1042, 1920, 2296, 2852
Csp6I	GTAC	7 cut(s)	568, 625, 859, 2072, 2281, 2513, 2798
CviQI	GTAC	7 cut(s)	568, 625, 859, 2072, 2281, 2513, 2798
DdeI	CTNAG	9 cut(s)	28, 67, 150, 174, 674, 847, 1115, 1815, 2378
DpnI	GATC	9 cut(s)	47, 219, 877, 1446, 1520, 1655, 1959, 2337, 2859
DpnII	GATC	9 cut(s)	45, 217, 875, 1444, 1518, 1653, 1957, 2335, 2857
DraI	TTTAAA	2 cut(s)	1419, 2943
DraIII	CACNNNGTG	2 cut(s)	43, 1703
EaeI	YGGCCR	5 cut(s)	700, 780, 2210, 2681, 2927
EagI	CGGCCG	1 cut(s)	2681
Eam1104I	CTCTTC	1 cut(s)	681
EarI	CTCTTC	1 cut(s)	681
EciI	GGCGGA	2 cut(s)	566, 1329
Ecl136II	GAGCTC	3 cut(s)	27, 844, 1888
EclXI	CGGCCG	1 cut(s)	2681
Eco130I	CCWWGG	4 cut(s)	357, 583, 1439, 1571
Eco147I	AGGCCT	5 cut(s)	241, 961, 1352, 1438, 1813
Eco24I	GRGCYC	3 cut(s)	29, 846, 1890
Eco31I	GGTCTC	1 cut(s)	980
Eco32I	GATATC	2 cut(s)	1459, 1936
Eco47I	GGWCC	3 cut(s)	302, 1920, 2296
Eco52I	CGGCCG	1 cut(s)	2681
Eco53kI	GAGCTC	3 cut(s)	27, 844, 1888
Eco57I	CTGAAG	4 cut(s)	984, 1527, 1598, 2057
Eco88I	CYCGRG	1 cut(s)	747
EcoICRI	GAGCTC	3 cut(s)	27, 844, 1888
EcoNI	CCTNNNNNAGG	1 cut(s)	1620
EcoO109I	RGGNCCY	3 cut(s)	302, 1920, 2296
EcoRI	GAATTC	2 cut(s)	346, 1557
EcoRII	CCWGG	7 cut(s)	288, 409, 804, 1257, 1808, 2202, 2593
EcoRV	GATATC	2 cut(s)	1459, 1936
EcoT14I	CCWWGG	4 cut(s)	357, 583, 1439, 1571
EcoT22I	ATGCAT	1 cut(s)	1855
EcoT38I	GRGCYC	3 cut(s)	29, 846, 1890
ErhI	CCWWGG	4 cut(s)	357, 583, 1439, 1571
FalI	AAGNNNNNCTT	2 cut(s)	2418, 2450
FaqI	GGGAC	6 cut(s)	849, 1906, 2017, 2160, 2570, 2686
FauI	CCCGC	1 cut(s)	2789
FauNDI	CATATG	1 cut(s)	2767
FbaI	TGATCA	2 cut(s)	45, 1653
FblI	GTMKAC	1 cut(s)	2665
Fnu4HI	GCNGC	8 cut(s)	1005, 2092, 2187, 2323, 2522, 2581, 2653, 2826
FokI	GGATG	6 cut(s)	1675, 1840, 2093, 2411, 2610, 2720
FriOI	GRGCYC	3 cut(s)	29, 846, 1890
Fsp4HI	GCNGC	8 cut(s)	1005, 2092, 2187, 2323, 2522, 2581, 2653, 2826
FspBI	CTAG	7 cut(s)	243, 525, 584, 1071, 1205, 1440, 1883
GluI	GCNGC	8 cut(s)	1005, 2092, 2187, 2323, 2522, 2581, 2653, 2826
GsaI	CCCAGC	2 cut(s)	1048, 2235
GsuI	CTGGAG	3 cut(s)	315, 1448, 2940
HapII	CCGG	8 cut(s)	783, 1675, 2153, 2213, 2680, 2684, 2804, 2926
HincII	GTYRAC	1 cut(s)	2745
HindII	GTYRAC	1 cut(s)	2745
HindIII	AAGCTT	1 cut(s)	671
HinfI	GANTC	8 cut(s)	575, 619, 929, 2146, 2329, 2733, 2915, 2922
HpaII	CCGG	8 cut(s)	783, 1675, 2153, 2213, 2680, 2684, 2804, 2926
HphI	GGTGA	9 cut(s)	156, 571, 647, 742, 879, 929, 1135, 1943, 2141
Hpy166II	GTNNAC	7 cut(s)	248, 535, 627, 1739, 2666, 2745, 2778
Hpy8I	GTNNAC	7 cut(s)	248, 535, 627, 1739, 2666, 2745, 2778
Hpy99I	CGWCG	1 cut(s)	1234
HpyCH4III	ACNGT	9 cut(s)	262, 567, 863, 1094, 1471, 2016, 2071, 2314, 2602
HpyCH4IV	ACGT	1 cut(s)	1995
HpyF10VI	GCNNNNNNNGC	6 cut(s)	548, 1004, 2195, 2822, 2834, 2860
HpyF3I	CTNAG	9 cut(s)	28, 67, 150, 174, 674, 847, 1115, 1815, 2378
HpySE526I	ACGT	1 cut(s)	1995
KflI	GGGWCCC	1 cut(s)	1920
KroI	GCCGGC	2 cut(s)	2679, 2683
KroNI	GCCGGC	2 cut(s)	2681, 2685
Ksp22I	TGATCA	2 cut(s)	45, 1653
Kzo9I	GATC	9 cut(s)	45, 217, 875, 1444, 1518, 1653, 1957, 2335, 2857
LguI	GCTCTTC	1 cut(s)	681
LmnI	GCTCC	4 cut(s)	805, 2135, 2562, 2789
Lsp1109I	GCAGC	5 cut(s)	991, 2078, 2173, 2664, 2812
LweI	GCATC	6 cut(s)	787, 1075, 1653, 1862, 2071, 2437
MaeI	CTAG	7 cut(s)	243, 525, 584, 1071, 1205, 1440, 1883
MaeII	ACGT	1 cut(s)	1995
MaeIII	GTNAC	8 cut(s)	310, 468, 517, 1135, 1423, 2143, 2218, 2497
MalI	GATC	9 cut(s)	47, 219, 877, 1446, 1520, 1655, 1959, 2337, 2859
MbiI	CCGCTC	2 cut(s)	2580, 2784
MboI	GATC	9 cut(s)	45, 217, 875, 1444, 1518, 1653, 1957, 2335, 2857
MboII	GAAGA	9 cut(s)	695, 698, 885, 1170, 1286, 1336, 1553, 2050, 2177
MflI	RGATCY	4 cut(s)	875, 1957, 2335, 2857
MhlI	GDGCHC	7 cut(s)	29, 846, 1890, 2248, 2780, 2839, 2900
MlyI	GAGTC	5 cut(s)	628, 938, 2140, 2924, 2931
MmeI	TCCRAC	2 cut(s)	194, 906
Mph1103I	ATGCAT	1 cut(s)	1855
MroNI	GCCGGC	2 cut(s)	2679, 2683
MslI	CAYNNNNRTG	3 cut(s)	362, 495, 2694
MspA1I	CMGCKG	2 cut(s)	1004, 2091
MspI	CCGG	8 cut(s)	783, 1675, 2153, 2213, 2680, 2684, 2804, 2926
MspR9I	CCNGG	8 cut(s)	290, 411, 806, 1259, 1810, 2153, 2204, 2595
Mva1269I	GAATGC	1 cut(s)	1486
MvaI	CCWGG	7 cut(s)	290, 411, 806, 1259, 1810, 2204, 2595
MwoI	GCNNNNNNNGC	6 cut(s)	548, 1004, 2195, 2822, 2834, 2860
NaeI	GCCGGC	2 cut(s)	2681, 2685
NciI	CCSGG	1 cut(s)	2153
NcoI	CCATGG	1 cut(s)	357
NdeI	CATATG	1 cut(s)	2767
NdeII	GATC	9 cut(s)	45, 217, 875, 1444, 1518, 1653, 1957, 2335, 2857
NgoMIV	GCCGGC	2 cut(s)	2679, 2683
NlaIV	GGNNCC	7 cut(s)	90, 1921, 1922, 2298, 2478, 2525, 2853
NmeAIII	GCCGAG	1 cut(s)	385
NmuCI	GTSAC	3 cut(s)	2143, 2218, 2497
NsiI	ATGCAT	1 cut(s)	1855
NspI	RCATGY	4 cut(s)	760, 1431, 1844, 2466
NspV	TTCGAA	1 cut(s)	1156
PaeR7I	CTCGAG	1 cut(s)	747
PagI	TCATGA	1 cut(s)	1585
PceI	AGGCCT	5 cut(s)	241, 961, 1352, 1438, 1813
PciI	ACATGT	2 cut(s)	756, 1427
PciSI	GCTCTTC	1 cut(s)	681
PctI	GAATGC	1 cut(s)	1486
PdiI	GCCGGC	2 cut(s)	2681, 2685
PfeI	GAWTC	3 cut(s)	575, 2329, 2733
PflFI	GACNNNGTC	1 cut(s)	1078
PflMI	CCANNNNNTGG	2 cut(s)	778, 1051
PfoI	TCCNGGA	1 cut(s)	1257
PkrI	GCNGC	8 cut(s)	1006, 2093, 2188, 2324, 2523, 2582, 2654, 2827
PleI	GAGTC	5 cut(s)	627, 937, 2140, 2923, 2930
PpsI	GAGTC	5 cut(s)	627, 937, 2140, 2923, 2930
PpuMI	RGGWCCY	3 cut(s)	302, 1920, 2296
PscI	ACATGT	2 cut(s)	756, 1427
PshAI	GACNNNNGTC	1 cut(s)	2172
PshBI	ATTAAT	1 cut(s)	1967
Psp124BI	GAGCTC	3 cut(s)	29, 846, 1890
Psp5II	RGGWCCY	3 cut(s)	302, 1920, 2296
Psp6I	CCWGG	7 cut(s)	288, 409, 804, 1257, 1808, 2202, 2593
PspFI	CCCAGC	2 cut(s)	1044, 2231
PspGI	CCWGG	7 cut(s)	288, 409, 804, 1257, 1808, 2202, 2593
PspN4I	GGNNCC	7 cut(s)	90, 1921, 1922, 2298, 2478, 2525, 2853
PspPI	GGNCC	6 cut(s)	116, 302, 1042, 1920, 2296, 2852
PspPPI	RGGWCCY	3 cut(s)	302, 1920, 2296
PspXI	VCTCGAGB	1 cut(s)	747
PstI	CTGCAG	4 cut(s)	2096, 2654, 2865, 2911
PstNI	CAGNNNCTG	4 cut(s)	778, 1051, 1787, 2266
PsuI	RGATCY	4 cut(s)	875, 1957, 2335, 2857
PsyI	GACNNNGTC	1 cut(s)	1078
PvuII	CAGCTG	2 cut(s)	1004, 2091
RsaI	GTAC	7 cut(s)	569, 626, 860, 2073, 2282, 2514, 2799
RsaNI	GTAC	7 cut(s)	568, 625, 859, 2072, 2281, 2513, 2798
RseI	CAYNNNNRTG	3 cut(s)	362, 495, 2694
SacI	GAGCTC	3 cut(s)	29, 846, 1890
SapI	GCTCTTC	1 cut(s)	681
SatI	GCNGC	8 cut(s)	1005, 2092, 2187, 2323, 2522, 2581, 2653, 2826
Sau3AI	GATC	9 cut(s)	45, 217, 875, 1444, 1518, 1653, 1957, 2335, 2857
Sau96I	GGNCC	6 cut(s)	116, 302, 1042, 1920, 2296, 2852
SchI	GAGTC	5 cut(s)	628, 938, 2140, 2924, 2931
ScrFI	CCNGG	8 cut(s)	290, 411, 806, 1259, 1810, 2153, 2204, 2595
SduI	GDGCHC	7 cut(s)	29, 846, 1890, 2248, 2780, 2839, 2900
SfaNI	GCATC	6 cut(s)	787, 1075, 1653, 1862, 2071, 2437
SfcI	CTRYAG	5 cut(s)	2092, 2628, 2650, 2861, 2907
Sfr274I	CTCGAG	1 cut(s)	747
SfuI	TTCGAA	1 cut(s)	1156
SinI	GGWCC	3 cut(s)	302, 1920, 2296
SlaI	CTCGAG	1 cut(s)	747
SmiMI	CAYNNNNRTG	3 cut(s)	362, 495, 2694
SmlI	CTYRAG	2 cut(s)	747, 1617
SmoI	CTYRAG	2 cut(s)	747, 1617
SseBI	AGGCCT	5 cut(s)	241, 961, 1352, 1438, 1813
SsiI	CCGC	8 cut(s)	551, 1314, 2189, 2322, 2492, 2521, 2580, 2782
SspMI	CTAG	7 cut(s)	243, 525, 584, 1071, 1205, 1440, 1883
SstI	GAGCTC	3 cut(s)	29, 846, 1890
StuI	AGGCCT	5 cut(s)	241, 961, 1352, 1438, 1813
StyD4I	CCNGG	8 cut(s)	288, 409, 804, 1257, 1808, 2151, 2202, 2593
StyI	CCWWGG	4 cut(s)	357, 583, 1439, 1571
TaaI	ACNGT	9 cut(s)	262, 567, 863, 1094, 1471, 2016, 2071, 2314, 2602
TaiI	ACGT	1 cut(s)	1998
TaqI	TCGA	7 cut(s)	208, 748, 1156, 1168, 1229, 1555, 2839
TatI	WGTACW	5 cut(s)	567, 624, 2071, 2280, 2512
TauI	GCSGC	3 cut(s)	2325, 2524, 2583
TfiI	GAWTC	3 cut(s)	575, 2329, 2733
TseFI	GTSAC	3 cut(s)	2143, 2218, 2497
TseI	GCWGC	5 cut(s)	1004, 2091, 2186, 2652, 2825
Tsp45I	GTSAC	3 cut(s)	2143, 2218, 2497
TspDTI	ATGAA	8 cut(s)	32, 339, 696, 1250, 1602, 1655, 1874, 2494
TspGWI	ACGGA	4 cut(s)	1714, 2776, 2822, 2917
Tth111I	GACNNNGTC	1 cut(s)	1078
Van91I	CCANNNNNTGG	2 cut(s)	778, 1051
VneI	GTGCAC	1 cut(s)	2776
VpaK11BI	GGWCC	3 cut(s)	302, 1920, 2296
VspI	ATTAAT	1 cut(s)	1967
XagI	CCTNNNNNAGG	1 cut(s)	1620
XapI	RAATTY	6 cut(s)	346, 737, 819, 1557, 1772, 2633
XbaI	TCTAGA	1 cut(s)	524
XceI	RCATGY	4 cut(s)	760, 1431, 1844, 2466
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1265, 1674
XhoI	CTCGAG	1 cut(s)	747
XmaJI	CCTAGG	2 cut(s)	583, 1439
XmiI	GTMKAC	1 cut(s)	2665
XspI	CTAG	7 cut(s)	243, 525, 584, 1071, 1205, 1440, 1883
Zsp2I	ATGCAT	1 cut(s)	1855

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.