Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0003981

Physical Location & Seq

Genomic Coordinates Reverse (-)

3383256 .. 3387084

Gene Structure 3829 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ36145

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1344 bp

ATGATGAACAAGAAAATGATCAATGGAATGACAGTTAGCCGGTGGGCTTGTATTAACTTCTCACGGAGTGTGCAGGAGAGTGTTGCTCGTGGGTTTTGTAGTGAACTTGGTCAGATGTGTCAAGTCTCTGGCATGGAATTTAATCCAGAACCTGTAATTCCAATCTACAATGCCAGGCCTGAGCAAGTAGAGAAAGCTTTGAAACATGTATATCATGCATCCATGAACAAAACAAAAGGAAAAGAATTAGAGCTCTTATTGGCTATTTTGCCTGACAACAACGGGTCCCTGTATGGTGATATCAAGCGAATATGTGAAACAGATCTTGGATTAATCTCGCAATGCTGTCTTACAAAGCATGTTTTCAAGATTAGCAAACAGTATTTGGCTAATGTGTCTCTTAAGATTAATGTTAAGATGGGTGGCAGAAACACTGTTCTTTTGGATGCTATTAGCTGCAGGATACCTTTAGTCAGTGATATACCAACCATAATTTTCGGAGCAGACGTGACTCACCCGGAGAATGGAGAAGATACCAGTCCCTCGATTGCTGCGGTGGTGGCTTCCCAGGATTGGCCGGAAGTGACCAAATATGCTGGGTTAGTTTGTGCTCAAGCTCACAGACAGGAACTGATACAAGATTTGTACAAGACATGGCAGGACCCTGTTCGTGGCACAGTCAGTGGCGGTATGATCCGGGATCTTCTGGTTTCCTTTAGGAAAGCAACAGGGCAGAAGCCTCTCAGGATTATATTTTACAGGGATGGCGTAAGTGAAGGGCAATTTTATCAGGTCTTACTCTATGAGCTTGATGCGATTAGGAAGGCGTGTGCTTCTCTGGAACCCAACTATCAACCGCCGGTGACTTTCATTGTAGTACAGAAGCGGCACCATACACGATTATTTGCTAATAACCATAGGGACAGAAGCAGTGTAGACAAGAGTGGCAACATATTGCCTGGCACTGTAGTTGATACCAAGATATGCCATCCTACAGAATTTGATTTCTATCTCTGCAGCCATGCTGGTATTCAGGGGACAAGTCGGCCAGCTCACTACCATGTTCTCTGGGATGAGAATAATTTTACCCCTGATGGAATCCAGTCGTTGACAAACAATCTTTGCTACACATATGCAAGGTGCACGCGCTCTGTGTCTGTTGTACCTCCGGCATATTATGCCCATTTGGCTGCTTTTCGTGCCCGATTCTATATGGAGCCAGATCTGCAGGATAATAGCTCTATTGGTCATGCTGCTAAGGGCACACGGGCTGCAGGAGAGTCTGGAGTCCGGCCATTGCCAGCTTTAAAGGAGAATGTGAAGAGAGTAATGTTTTATTGTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002252 GO:0002376 GO:0003674 GO:0003676 GO:0003723 GO:0005488 GO:0006139 GO:0006725 GO:0006807 GO:0006950 GO:0006952 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009615 GO:0009987 GO:0010586 GO:0016070 GO:0019827 GO:0032501 GO:0032502 GO:0034641 GO:0034660 GO:0035019 GO:0035198 GO:0043170 GO:0043207 GO:0044237 GO:0044238 GO:0046483 GO:0048509 GO:0050789 GO:0050793 GO:0050896 GO:0051607 GO:0051704 GO:0051707 GO:0061980 GO:0065007 GO:0071704 GO:0090304 GO:0097159 GO:0098542 GO:0098727 GO:1901360 GO:1901363 GO:1902183

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ArgoL1 ArgoL2 ArgoMid ArgoN PAZ Piwi

Protein Analysis

447

Amino Acids

49.97

Weight (kDa)

8.73

Isoelectric Point (pI)

43.89

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ArgoMid	PF16487	1 - 71	4.7e-10	Mid domain of argonaute
Piwi	PF02171	86 - 405	2.1e-117	Piwi domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0003981)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G43810 AT5G43810 AT5G43810 AT5G43810
fragaria_vesca	FvH4_4g01630 FvH4_4g01630 FvH4_4g01630 FvH4_4g01630 FvH4_4g01630 FvH4_4g01630 FvH4_4g01630
malus_domestica	MD13G1201400.v1.1 MD16G1201200.v1.1
prunus_persica	Prupe.1G022900_v2.0.a1 Prupe.1G022900_v2.0.a1
pyrus_communis	pycom13g17460 pycom16g16970
rosa_chinensis	RchiOBHm_Chr4g0388221 RchiOBHm_Chr4g0388231
rosa_laevigata	RLG00000010073
rosa_roxburghii	Rroxscaffold_5G00334710
rosa_rugosa	Rorug03G0316100 Rorug03G0316200 Rorug03G0316300 Rorug03G0316300 Rorug03G0316300 Rorug03G0316300 Rorug03G0316400
rosa_samantha	Rh4AG021700 Rh4BG015800 Rh4CG021900 Rh4DG016600
rosa_wichuraiana	Rw4G001420

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	888
AccI	GTMKAC	1 cut(s)	936
AccII	CGCG	1 cut(s)	1147
AciI	CCGC	4 cut(s)	554, 687, 857, 886
AclWI	GGATC	2 cut(s)	688, 708
AcoI	YGGCCR	3 cut(s)	575, 1046, 1292
AcsI	RAATTY	2 cut(s)	137, 998
AdeI	CACNNNGTG	1 cut(s)	68
AfaI	GTAC	3 cut(s)	647, 879, 1164
AfiI	CCNNNNNNNGG	3 cut(s)	524, 573, 671
AflII	CTTAAG	1 cut(s)	401
AflIII	ACRYGT	1 cut(s)	205
AgsI	TTSAA	2 cut(s)	202, 367
AjiI	CACGTC	1 cut(s)	508
AjnI	CCWGG	3 cut(s)	173, 567, 958
AjuI	GAANNNNNNNTTGG	2 cut(s)	309, 341
AluBI	AGCT	8 cut(s)	197, 253, 456, 617, 808, 1052, 1239, 1304
AluI	AGCT	8 cut(s)	197, 253, 456, 617, 808, 1052, 1239, 1304
Alw21I	GWGCWC	3 cut(s)	255, 613, 1145
Alw26I	GTCTC	2 cut(s)	130, 402
Alw44I	GTGCAC	1 cut(s)	1141
AlwI	GGATC	2 cut(s)	688, 708
AlwNI	CAGNNNCTG	2 cut(s)	152, 631
AoxI	GGCC	4 cut(s)	176, 575, 1046, 1292
ApaLI	GTGCAC	1 cut(s)	1141
ApeKI	GCWGC	6 cut(s)	456, 551, 1017, 1190, 1253, 1271
ApoI	RAATTY	2 cut(s)	137, 998
AseI	ATTAAT	2 cut(s)	332, 408
AspLEI	GCGC	1 cut(s)	1149
AspS9I	GGNCC	2 cut(s)	285, 661
AsuC2I	CCSGG	2 cut(s)	518, 698
AsuHPI	GGTGA	3 cut(s)	308, 506, 874
AvaII	GGWCC	2 cut(s)	285, 661
BaeGI	GKGCMC	3 cut(s)	1145, 1204, 1265
BanI	GGYRCC	1 cut(s)	888
BanII	GRGCYC	1 cut(s)	255
BauI	CACGAG	1 cut(s)	87
Bbv12I	GWGCWC	3 cut(s)	255, 613, 1145
BbvI	GCAGC	6 cut(s)	443, 538, 1029, 1177, 1240, 1258
BccI	CCATC	4 cut(s)	412, 758, 996, 1088
BciT130I	CCWGG	3 cut(s)	175, 569, 960
BciVI	GTATCC	1 cut(s)	456
BclI	TGATCA	1 cut(s)	18
BcnI	CCSGG	2 cut(s)	518, 698
BcoDI	GTCTC	2 cut(s)	130, 402
BfmI	CTRYAG	6 cut(s)	457, 966, 993, 1015, 1226, 1272
BfrI	CTTAAG	1 cut(s)	401
BfuI	GTATCC	1 cut(s)	456
BglI	GCCNNNNNGGC	1 cut(s)	1187
BglII	AGATCT	2 cut(s)	322, 1222
BisI	GCNGC	7 cut(s)	457, 552, 887, 1018, 1191, 1254, 1272
BlsI	GCNGC	7 cut(s)	458, 553, 888, 1019, 1192, 1255, 1273
Bme1390I	CCNGG	5 cut(s)	175, 518, 569, 698, 960
Bme18I	GGWCC	2 cut(s)	285, 661
BmgBI	CACGTC	1 cut(s)	508
BmgT120I	GGNCC	2 cut(s)	285, 661
BmiI	GGNNCC	6 cut(s)	286, 287, 663, 843, 890, 1218
BmrFI	CCNGG	5 cut(s)	175, 518, 569, 698, 960
BmsI	GCATC	3 cut(s)	227, 436, 802
BplI	GAGNNNNNCTC	2 cut(s)	70, 102
BpmI	CTGGAG	1 cut(s)	1305
Bpu10I	CCTNAGC	2 cut(s)	180, 1257
BpuEI	CTTGAG	1 cut(s)	597
BpuMI	CCSGG	2 cut(s)	518, 698
BsaBI	GATNNNNATC	1 cut(s)	1008
BsaJI	CCNNGG	1 cut(s)	567
BsaXI	ACNNNNNCTCC	2 cut(s)	492, 522
Bsc4I	CCNNNNNNNGG	3 cut(s)	524, 573, 671
Bse118I	RCCGGY	2 cut(s)	39, 859
Bse1I	ACTGG	2 cut(s)	537, 1102
Bse3DI	GCAATG	2 cut(s)	347, 1295
Bse8I	GATNNNNATC	1 cut(s)	1008
BseBI	CCWGG	3 cut(s)	175, 569, 960
BseDI	CCNNGG	1 cut(s)	567
BseGI	GGATG	5 cut(s)	218, 451, 769, 988, 1078
BseJI	GATNNNNATC	1 cut(s)	1008
BseLI	CCNNNNNNNGG	3 cut(s)	524, 573, 671
BseMI	GCAATG	2 cut(s)	347, 1295
BseMII	CTCAG	2 cut(s)	171, 757
BseNI	ACTGG	2 cut(s)	537, 1102
BseSI	GKGCMC	3 cut(s)	1145, 1204, 1265
BseXI	GCAGC	6 cut(s)	443, 538, 1029, 1177, 1240, 1258
BseYI	CCCAGC	1 cut(s)	596
BsgI	GTGCAG	1 cut(s)	92
Bsh1236I	CGCG	1 cut(s)	1147
BshFI	GGCC	4 cut(s)	178, 577, 1048, 1294
BshNI	GGYRCC	1 cut(s)	888
BsiHKAI	GWGCWC	3 cut(s)	255, 613, 1145
BsiSI	CCGG	7 cut(s)	40, 518, 578, 697, 860, 1169, 1291
BslFI	GGGAC	4 cut(s)	271, 525, 935, 1051
BslI	CCNNNNNNNGG	3 cut(s)	524, 573, 671
BsmAI	GTCTC	2 cut(s)	130, 402
BsmFI	GGGAC	4 cut(s)	271, 525, 935, 1051
BsnI	GGCC	4 cut(s)	178, 577, 1048, 1294
Bsp1286I	GDGCHC	5 cut(s)	255, 613, 1145, 1204, 1265
Bsp1407I	TGTACA	1 cut(s)	645
Bsp143I	GATC	5 cut(s)	18, 322, 693, 700, 1222
BspACI	CCGC	4 cut(s)	554, 687, 857, 886
BspANI	GGCC	4 cut(s)	178, 577, 1048, 1294
BspCNI	CTCAG	2 cut(s)	172, 756
BspFNI	CGCG	1 cut(s)	1147
BspLI	GGNNCC	6 cut(s)	286, 287, 663, 843, 890, 1218
BspMAI	CTGCAG	4 cut(s)	461, 1019, 1230, 1276
BspPI	GGATC	2 cut(s)	688, 708
BspT107I	GGYRCC	1 cut(s)	888
BspTI	CTTAAG	1 cut(s)	401
BsrDI	GCAATG	2 cut(s)	347, 1295
BsrFI	RCCGGY	2 cut(s)	39, 859
BsrGI	TGTACA	1 cut(s)	645
BsrI	ACTGG	2 cut(s)	537, 1102
BssAI	RCCGGY	2 cut(s)	39, 859
BssECI	CCNNGG	1 cut(s)	567
BssMI	GATC	5 cut(s)	18, 322, 693, 700, 1222
BssSI	CACGAG	1 cut(s)	87
Bst2BI	CACGAG	1 cut(s)	87
Bst2UI	CCWGG	3 cut(s)	175, 569, 960
Bst4CI	ACNGT	5 cut(s)	34, 381, 436, 679, 967
Bst6I	CTCTTC	1 cut(s)	1316
BstAFI	CTTAAG	1 cut(s)	401
BstAPI	GCANNNNNTGC	1 cut(s)	1178
BstAUI	TGTACA	1 cut(s)	645
BstC8I	GCNNGC	3 cut(s)	1050, 1145, 1302
BstDEI	CTNAG	3 cut(s)	180, 743, 1257
BstF5I	GGATG	5 cut(s)	218, 451, 769, 988, 1078
BstFNI	CGCG	1 cut(s)	1147
BstHHI	GCGC	1 cut(s)	1149
BstKTI	GATC	5 cut(s)	21, 325, 696, 703, 1225
BstMAI	GTCTC	2 cut(s)	130, 402
BstMBI	GATC	5 cut(s)	18, 322, 693, 700, 1222
BstMWI	GCNNNNNNNGC	5 cut(s)	560, 1178, 1187, 1199, 1225
BstNI	CCWGG	3 cut(s)	175, 569, 960
BstNSI	RCATGY	2 cut(s)	209, 362
BstSCI	CCNGG	5 cut(s)	173, 516, 567, 696, 958
BstSFI	CTRYAG	6 cut(s)	457, 966, 993, 1015, 1226, 1272
BstSLI	GKGCMC	3 cut(s)	1145, 1204, 1265
BstUI	CGCG	1 cut(s)	1147
BstV1I	GCAGC	6 cut(s)	443, 538, 1029, 1177, 1240, 1258
BstX2I	RGATCY	3 cut(s)	322, 700, 1222
BstYI	RGATCY	3 cut(s)	322, 700, 1222
BsuI	GTATCC	1 cut(s)	456
BsuRI	GGCC	4 cut(s)	178, 577, 1048, 1294
BtrI	CACGTC	1 cut(s)	508
BtsCI	GGATG	5 cut(s)	218, 451, 769, 988, 1078
BtsI	GCAGTG	1 cut(s)	937
BtsIMutI	CAGTG	5 cut(s)	432, 481, 688, 937, 963
Cac8I	GCNNGC	3 cut(s)	1050, 1145, 1302
CaiI	CAGNNNCTG	2 cut(s)	152, 631
CfoI	GCGC	1 cut(s)	1149
Cfr10I	RCCGGY	2 cut(s)	39, 859
Cfr13I	GGNCC	2 cut(s)	285, 661
Csp6I	GTAC	3 cut(s)	646, 878, 1163
CviAII	CATG	9 cut(s)	133, 206, 215, 223, 359, 654, 1022, 1061, 1250
CviQI	GTAC	3 cut(s)	646, 878, 1163
DdeI	CTNAG	3 cut(s)	180, 743, 1257
DpnI	GATC	5 cut(s)	20, 324, 695, 702, 1224
DpnII	GATC	5 cut(s)	18, 322, 693, 700, 1222
DraI	TTTAAA	1 cut(s)	1308
DraIII	CACNNNGTG	1 cut(s)	68
EaeI	YGGCCR	3 cut(s)	575, 1046, 1292
Eam1104I	CTCTTC	1 cut(s)	1316
EarI	CTCTTC	1 cut(s)	1316
Ecl136II	GAGCTC	1 cut(s)	253
Eco147I	AGGCCT	1 cut(s)	178
Eco24I	GRGCYC	1 cut(s)	255
Eco32I	GATATC	1 cut(s)	301
Eco47I	GGWCC	2 cut(s)	285, 661
Eco53kI	GAGCTC	1 cut(s)	253
EcoICRI	GAGCTC	1 cut(s)	253
EcoO109I	RGGNCCY	2 cut(s)	285, 661
EcoRII	CCWGG	3 cut(s)	173, 567, 958
EcoRV	GATATC	1 cut(s)	301
EcoT22I	ATGCAT	1 cut(s)	220
EcoT38I	GRGCYC	1 cut(s)	255
FaeI	CATG	9 cut(s)	136, 209, 218, 226, 362, 657, 1025, 1064, 1253
FaqI	GGGAC	4 cut(s)	271, 525, 935, 1051
FatI	CATG	9 cut(s)	132, 205, 214, 222, 358, 653, 1021, 1060, 1249
FauNDI	CATATG	1 cut(s)	1132
FbaI	TGATCA	1 cut(s)	18
FblI	GTMKAC	1 cut(s)	936
Fnu4HI	GCNGC	7 cut(s)	457, 552, 887, 1018, 1191, 1254, 1272
FokI	GGATG	5 cut(s)	205, 458, 776, 975, 1085
FriOI	GRGCYC	1 cut(s)	255
Fsp4HI	GCNGC	7 cut(s)	457, 552, 887, 1018, 1191, 1254, 1272
GlaI	GCGC	1 cut(s)	1148
GluI	GCNGC	7 cut(s)	457, 552, 887, 1018, 1191, 1254, 1272
GsaI	CCCAGC	1 cut(s)	600
GsuI	CTGGAG	1 cut(s)	1305
HaeIII	GGCC	4 cut(s)	178, 577, 1048, 1294
HapII	CCGG	7 cut(s)	40, 518, 578, 697, 860, 1169, 1291
HhaI	GCGC	1 cut(s)	1149
Hin1II	CATG	9 cut(s)	136, 209, 218, 226, 362, 657, 1025, 1064, 1253
Hin6I	GCGC	1 cut(s)	1147
HinP1I	GCGC	1 cut(s)	1147
HincII	GTYRAC	1 cut(s)	1110
HindII	GTYRAC	1 cut(s)	1110
HindIII	AAGCTT	1 cut(s)	195
HinfI	GANTC	5 cut(s)	511, 1098, 1206, 1280, 1287
HpaII	CCGG	7 cut(s)	40, 518, 578, 697, 860, 1169, 1291
HphI	GGTGA	3 cut(s)	308, 506, 874
Hpy166II	GTNNAC	4 cut(s)	104, 937, 1110, 1143
Hpy188I	TCNGA	2 cut(s)	114, 500
Hpy188III	TCNNGA	5 cut(s)	146, 367, 745, 839, 1284
Hpy8I	GTNNAC	4 cut(s)	104, 937, 1110, 1143
HpyAV	CCTTC	2 cut(s)	770, 817
HpyCH4III	ACNGT	5 cut(s)	34, 381, 436, 679, 967
HpyCH4IV	ACGT	1 cut(s)	507
HpyCH4V	TGCA	8 cut(s)	73, 218, 459, 1017, 1136, 1143, 1228, 1274
HpyF10VI	GCNNNNNNNGC	5 cut(s)	560, 1178, 1187, 1199, 1225
HpyF3I	CTNAG	3 cut(s)	180, 743, 1257
HpySE526I	ACGT	1 cut(s)	507
Hsp92II	CATG	9 cut(s)	136, 209, 218, 226, 362, 657, 1025, 1064, 1253
HspAI	GCGC	1 cut(s)	1147
KflI	GGGWCCC	1 cut(s)	285
Ksp22I	TGATCA	1 cut(s)	18
Kzo9I	GATC	5 cut(s)	18, 322, 693, 700, 1222
LmnI	GCTCC	2 cut(s)	500, 1216
Lsp1109I	GCAGC	6 cut(s)	443, 538, 1029, 1177, 1240, 1258
LweI	GCATC	3 cut(s)	227, 436, 802
MaeII	ACGT	1 cut(s)	507
MaeIII	GTNAC	3 cut(s)	508, 583, 862
MalI	GATC	5 cut(s)	20, 324, 695, 702, 1224
MboI	GATC	5 cut(s)	18, 322, 693, 700, 1222
MboII	GAAGA	3 cut(s)	542, 695, 1333
MflI	RGATCY	3 cut(s)	322, 700, 1222
MhlI	GDGCHC	5 cut(s)	255, 613, 1145, 1204, 1265
MluCI	AATT	7 cut(s)	137, 156, 245, 492, 782, 998, 1081
MlyI	GAGTC	3 cut(s)	505, 1289, 1296
MnlI	CCTC	3 cut(s)	553, 750, 1176
Mph1103I	ATGCAT	1 cut(s)	220
MseI	TTAA	7 cut(s)	54, 141, 332, 402, 408, 414, 1307
MslI	CAYNNNNRTG	1 cut(s)	1059
MspCI	CTTAAG	1 cut(s)	401
MspI	CCGG	7 cut(s)	40, 518, 578, 697, 860, 1169, 1291
MspR9I	CCNGG	5 cut(s)	175, 518, 569, 698, 960
MvaI	CCWGG	3 cut(s)	175, 569, 960
MvnI	CGCG	1 cut(s)	1147
MwoI	GCNNNNNNNGC	5 cut(s)	560, 1178, 1187, 1199, 1225
NciI	CCSGG	2 cut(s)	518, 698
NdeI	CATATG	1 cut(s)	1132
NdeII	GATC	5 cut(s)	18, 322, 693, 700, 1222
NlaIII	CATG	9 cut(s)	136, 209, 218, 226, 362, 657, 1025, 1064, 1253
NlaIV	GGNNCC	6 cut(s)	286, 287, 663, 843, 890, 1218
NmuCI	GTSAC	3 cut(s)	508, 583, 862
NsiI	ATGCAT	1 cut(s)	220
NspI	RCATGY	2 cut(s)	209, 362
PceI	AGGCCT	1 cut(s)	178
PciI	ACATGT	1 cut(s)	205
PcsI	WCGNNNNNNNCGW	1 cut(s)	504
PfeI	GAWTC	2 cut(s)	1098, 1206
PfoI	TCCNGGA	1 cut(s)	696
PkrI	GCNGC	7 cut(s)	458, 553, 888, 1019, 1192, 1255, 1273
PleI	GAGTC	3 cut(s)	505, 1288, 1295
PpsI	GAGTC	3 cut(s)	505, 1288, 1295
PpuMI	RGGWCCY	2 cut(s)	285, 661
PscI	ACATGT	1 cut(s)	205
PshBI	ATTAAT	2 cut(s)	332, 408
Psp124BI	GAGCTC	1 cut(s)	255
Psp5II	RGGWCCY	2 cut(s)	285, 661
Psp6I	CCWGG	3 cut(s)	173, 567, 958
PspFI	CCCAGC	1 cut(s)	596
PspGI	CCWGG	3 cut(s)	173, 567, 958
PspN4I	GGNNCC	6 cut(s)	286, 287, 663, 843, 890, 1218
PspPI	GGNCC	2 cut(s)	285, 661
PspPPI	RGGWCCY	2 cut(s)	285, 661
PstI	CTGCAG	4 cut(s)	461, 1019, 1230, 1276
PstNI	CAGNNNCTG	2 cut(s)	152, 631
PsuI	RGATCY	3 cut(s)	322, 700, 1222
RsaI	GTAC	3 cut(s)	647, 879, 1164
RsaNI	GTAC	3 cut(s)	646, 878, 1163
RseI	CAYNNNNRTG	1 cut(s)	1059
SacI	GAGCTC	1 cut(s)	255
SaqAI	TTAA	7 cut(s)	54, 141, 332, 402, 408, 414, 1307
SatI	GCNGC	7 cut(s)	457, 552, 887, 1018, 1191, 1254, 1272
Sau3AI	GATC	5 cut(s)	18, 322, 693, 700, 1222
Sau96I	GGNCC	2 cut(s)	285, 661
SchI	GAGTC	3 cut(s)	505, 1289, 1296
ScrFI	CCNGG	5 cut(s)	175, 518, 569, 698, 960
SduI	GDGCHC	5 cut(s)	255, 613, 1145, 1204, 1265
SfaNI	GCATC	3 cut(s)	227, 436, 802
SfcI	CTRYAG	6 cut(s)	457, 966, 993, 1015, 1226, 1272
SgrAI	CRCCGGYG	1 cut(s)	859
SinI	GGWCC	2 cut(s)	285, 661
SmiMI	CAYNNNNRTG	1 cut(s)	1059
SmlI	CTYRAG	2 cut(s)	401, 612
SmoI	CTYRAG	2 cut(s)	401, 612
Sse9I	AATT	7 cut(s)	137, 156, 245, 492, 782, 998, 1081
SseBI	AGGCCT	1 cut(s)	178
SsiI	CCGC	4 cut(s)	554, 687, 857, 886
SstI	GAGCTC	1 cut(s)	255
StuI	AGGCCT	1 cut(s)	178
StyD4I	CCNGG	5 cut(s)	173, 516, 567, 696, 958
TaaI	ACNGT	5 cut(s)	34, 381, 436, 679, 967
TaiI	ACGT	1 cut(s)	510
TaqI	TCGA	1 cut(s)	545
TasI	AATT	7 cut(s)	137, 156, 245, 492, 782, 998, 1081
TatI	WGTACW	2 cut(s)	645, 877
TauI	GCSGC	1 cut(s)	889
TfiI	GAWTC	2 cut(s)	1098, 1206
Tru1I	TTAA	7 cut(s)	54, 141, 332, 402, 408, 414, 1307
Tru9I	TTAA	7 cut(s)	54, 141, 332, 402, 408, 414, 1307
TscAI	CASTG	5 cut(s)	439, 481, 688, 937, 970
TseFI	GTSAC	3 cut(s)	508, 583, 862
TseI	GCWGC	6 cut(s)	456, 551, 1017, 1190, 1253, 1271
Tsp45I	GTSAC	3 cut(s)	508, 583, 862
TspDTI	ATGAA	3 cut(s)	20, 239, 859
TspGWI	ACGGA	1 cut(s)	79
TspRI	CASTG	5 cut(s)	439, 481, 688, 937, 970
Vha464I	CTTAAG	1 cut(s)	401
VneI	GTGCAC	1 cut(s)	1141
VpaK11BI	GGWCC	2 cut(s)	285, 661
VspI	ATTAAT	2 cut(s)	332, 408
XapI	RAATTY	2 cut(s)	137, 998
XceI	RCATGY	2 cut(s)	209, 362
XmiI	GTMKAC	1 cut(s)	936
Zsp2I	ATGCAT	1 cut(s)	220

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.