FvH4_4g07050

vascular transport

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
OG0011356
Physical Location & Seq
Reverse (-)
6436313 .. 6441039
4727 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_4g07050.t1

Sequence Viewer

Length: 3195 bp
ATGCGCTCAGGAGGTTGTGCGGTGCAGCAGACCCTCACAGCGGAGGCTGCTTCGGTTCTGAAGCACTCTCTCAGCTTAGCCAGGCGGAGAGGCCATGCTCAGGTCACTCCTCTCCACGTGGCCGCCACTCTCCTCGCCTCAAGAACCAGTCTTTTACGGCGGGCCTGTCTCAAAGCTGCCGCTGCAGCCAATCACAACCCGCCACATCACCACCCTCTTCAATGCAGGGCCCTGGAGCTCTGCTTCAATGTGGCCCTCAACAGACTCCCCACCACGCCTCCCTCCGGAGGTGGCGGCGCCGCCAGTCCTCTCCTTGTGAGCCACGGCCAGCATCACCAGCAGCAGCAGCCTTCTCTGTCCAATGCTCTCATTGCTGCTCTGAAAAGGGCCCAAGCCCACCAGAGAAGAGGGTGCATAGAGCAGCAGAACCAGCAGCAGCCGCTTCTGACGATCAAGGTTGAGCTTGAGCAGCTCATAATCTCCATCTTGGATGACCCAAGTGTTAGTAGGGTTATGAGGGAAGCCGGGTTTTCGAGTACTTCTGTCAAGAACAACTTAGAGGACACCTCCTCTGTTTCCTCTGTTTCCTCTGTTTTTCAGTGTTATAATAACACTGGTGGGGTTTTCTCTTCTCCTTGTTCACCTACTGCTCCTGAAAATCTAAACCATCATCATATCACTCCCTCTGGGAATTTCTGGCAAACCCATTTCTTGACCTACGCTTCTGAGCAAAACCCACTTCTTTATTCCTCACGACCAAAGAAGTTACTTCTTCCCTTCAATGTCAGCTCCATTAGTACTCCTGCAGAGTCTGTTTCTTATACCAAGGAAGATGTGAAGTTGGTGTTTGAGGTTTTGGTGAGGAAGAACAGTAGGAAAAGGAACACTGTGATTGTGGGTGATTCTGTGTCCATTACTGAAGGCCTTGTTGCTGAGGTCATGGGGAGGTTAGAGAAAGGTGCAGAGGTTCCTGAGGAACTGAAATCAACCCATTTCGTCAAGTTTCAGTTCCCACATGTTTCTCTGAGGTACATGAAGAGAGAAGATGTGGAATCCAAAATCACAGAGCTCAAAAGGAAACTGGATCACTATGGAGGAGGTGGTGCTATTATTTACATTGGAGACTTGAAGTGGACAATTAGTGATGAGAAAGAAGGAGGATTAGTCTCTGGTGGGTATAGCCCAGCTGAGCATTTAGTTTCAGGAATTTCAAAGGTGGTTTTAGATTATGAAAGCAGCTCATTCTCAAGCACAAAGCCAAAGGTTTGGTTGATGGCTACTGCCAGTTATCAAACATACATGAGATGCCAAATGAGGCAACCTTCTCTTGAGATTCAATGGGGTCTTCAAGCTGTTTCAGTTCCATCAGGAGGTCTTGGTTTGAGTCTCCATGCTTCCAGTGTCCATGATTCGAGAGTTAACTTTTCTCAAAACTCATCCGAAGTGCTGGAAACAAAGCCATTCAGTAGCAGCAAGGATCATGAACAAGATCATAGTAAGCTCCCTTGCTGTGAAGAATGCTATTCAAATTATGAGAAAGAAGCTCAGTTGCTCAAATCTGGCCAGCAGAAGTTGCCTGCGTGGCTTCAACCACTTGATACTGAAGCCAGTCAAAAGGATGAAGTGCTTGAATTGAGGAGAAAGTGGAACAGGTTATGCTACAGTCTGCACCAAGGAAGGCATAACCATAATCATTCAATCCCCGCTTCGTACAACCATCAAAGCTTAACCGGGAAGAACCATTCTTATAGTACTTCATCGTACCCTTGGTTGTCAACTAGGAATGGCATCTTCCCAGATCTGAATTCGATCTCTTTTGCTGATCATCCAGCCTCAGACCCTGCAAGCGATGGCGCTAATCTGGTGCCTCGGTTCAGGAGACAACAATCATGTAGCACAATTGAGTTCAATTTCGAAAATGGGGCTCGAAAGCATGAAATAGTGGAACCAACATTGGATTCGTTGAAACTCAGTGAAGATAAGGAAGTGAAGATCACACTTGCTCTTGGCAACTCTGTCTTTTCTGATTCAGGAAAATCAGTGCTGCAGAGAGCTGACATGTGTAAGCTTTTGAAAGAGAATGTGCCTTGGCAATCTGAATCCATTCCCTCAATAGTGGAAGCCATAATCAGCTCCAAACCATGTTCAGAGACTTTGTTTCTGATTGATGGAAATGACTCCATTGGAAAAAGAAGGTTGGCTCAGGCGATAGCAGAGTTGGTTCTGGGGTCTGCTGATTCACTCTTGCATATCAACATGAACAAACGGGAACATGAGATGAATCCTAGAGTGCAAAAACTAAAAAGAGCCTTGAAATCCAGTGACAAGCTAGTTGTGTTGGTAGAAGATATTGATTTGGCTGATGCACAGTTCTTGAAATTCCTAGCTGATGGTTTTGAGGCTCGAAAATGTGGAGAAGTGAGTAGAAGAGATGGGAATCAAAGCCAAGGAATATTCATTTTGACCAAGGGTGAGTCCGCAAGAAATGAGTACCAGGGTTCTATAATCCAAATGAAGTTGAAAGTTGATGAGAAAAGTACCAGTCCTAGTTTTGGAATAGCTAGCTTCGACCACAAGCGAAAAGCTGACTGGGAGCTTGAAAACAAGGCCAAATCTCCAAGATTGGAAGAGAAGGAGGATTCAAGTGTGGTTGTTGCCTTTGAGAATGTGAATAGCAAGAAGGACTTCTCAAGGCAATCAAGCTTCAACAGTAACCTTGATCTCAACCTCAAAGCCGGTGAGGACAATGAAATAGAAGACAATGCAGGGGAGGTGAGTCCTATTTCAAGTGATTTGACCCGGGACTCTGCCACGGATGTCCAAAACCCACTTGGGTTCCTCGAATCAATCGAGAACATCTTCGTTTTCAATCGAAGCCCAGCTAGAGATCGAGAGGCCACCGAGCTTTTCTTGTCCAAGATTGAAGGGTGCTTTGAGGGTGTACATGGGAAACAAAATGGGGTTAGTTTTAGTGTGGATAAGAGGGTGTTAGAGGAGATATCTGTTGGGTCTGGTTCTTTTCCCAATAGCTTGTTTGAGAAATGGCTAAAAGACATTTTCCAAACAAGCCTAAAATCGGTTATATTTGGCGGGAAAGAGGGTATACTTGTAAGGCTATGTTTGGGGGGTAAAGAAGAAGGCATTTTGGAGGGTTTCTTGGGCTCTTGCCTTCCCAAGAAAATCCAAATTTCTTGA

Protein Analysis

1065

Amino Acids

117.56

Weight (kDa)

7.22

Isoelectric Point (pI)

49.21

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NBD_SMAX1 PF23569 275 - 467 1.8e-77 SMAX1 nucleotide binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0011356)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G29920 AT4G29920
fragaria_vesca FvH4_4g07050 FvH4_4g07050
malus_domestica MD00G1086800.v1.1 MD16G1247100.v1.1
prunus_persica Prupe.1G073700_v2.0.a1
pyrus_communis pycom13g21290 pycom16g20740
rosa_chinensis RchiOBHm_Chr4g0399171
rosa_laevigata RLG00000009293
rosa_multiflora Rmu_sc0002062.1_g000001 Rmu_sc0006088.1_g000002
rosa_roxburghii Rroxscaffold_5G00344130
rosa_rugosa Rorug04G0014600
rosa_samantha Rh4AG092500 Rh4BG090500 Rh4CG101000 Rh4DG084900
rosa_wichuraiana Rw4G007620

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 606
AccB1I GGYRCC 2 cut(s) 296, 1864
AccI GTMKAC 1 cut(s) 3103
AccIII TCCGGA 1 cut(s) 284
AclWI GGATC 2 cut(s) 1092, 1485
AcoI YGGCCR 3 cut(s) 120, 325, 1561
AcsI RAATTY 5 cut(s) 691, 1206, 1804, 2378, 3186
AcuI CTGAAG 3 cut(s) 80, 939, 1623
AcvI CACGTG 1 cut(s) 118
AcyI GRCGYC 1 cut(s) 297
AfaI GTAC 9 cut(s) 538, 799, 1031, 1712, 1753, 1763, 2492, 2539, 2943
AfiI CCNNNNNNNGG 7 cut(s) 40, 100, 284, 287, 1370, 2552, 3076
AflIII ACRYGT 2 cut(s) 1015, 2058
AjnI CCWGG 3 cut(s) 80, 231, 2493
AjuI GAANNNNNNNTTGG 2 cut(s) 1942, 1974
Alw21I GWGCWC 2 cut(s) 240, 1071
Alw26I GTCTC 6 cut(s) 173, 1116, 1171, 1391, 1873, 2144
AlwI GGATC 2 cut(s) 1092, 1485
AlwNI CAGNNNCTG 2 cut(s) 812, 1841
Ama87I CYCGRG 1 cut(s) 2799
Aor13HI TCCGGA 1 cut(s) 284
ApaI GGGCCC 2 cut(s) 232, 391
ApoI RAATTY 5 cut(s) 691, 1206, 1804, 2378, 3186
Asp700I GAANNNNTTC 3 cut(s) 2103, 2684, 2858
AspLEI GCGC 3 cut(s) 6, 299, 1856
AspS9I GGNCC 6 cut(s) 162, 228, 229, 253, 387, 388
AsuC2I CCSGG 4 cut(s) 526, 1732, 2800, 2801
AsuHPI GGTGA 8 cut(s) 200, 326, 633, 871, 911, 2483, 2750, 2785
AsuII TTCGAA 1 cut(s) 1914
AsuNHI GCTAGC 1 cut(s) 2561
AvaI CYCGRG 1 cut(s) 2799
AxyI CCTNAGG 1 cut(s) 972
BaeGI GKGCMC 2 cut(s) 232, 391
BalI TGGCCA 1 cut(s) 1563
BanI GGYRCC 2 cut(s) 296, 1864
BanII GRGCYC 6 cut(s) 232, 240, 391, 1071, 1927, 3164
BbrPI CACGTG 1 cut(s) 118
BbsI GAAGAC 2 cut(s) 1337, 2763
Bbv12I GWGCWC 2 cut(s) 240, 1071
BbvCI CCTCAGC 1 cut(s) 933
BccI CCATC 9 cut(s) 491, 675, 1267, 1372, 1725, 1844, 2162, 2384, 2426
BceAI ACGGC 2 cut(s) 173, 340
BciT130I CCWGG 3 cut(s) 82, 233, 2495
BclI TGATCA 1 cut(s) 1822
BcnI CCSGG 4 cut(s) 526, 1732, 2800, 2801
BcoDI GTCTC 6 cut(s) 173, 1116, 1171, 1391, 1873, 2144
BfaI CTAG 7 cut(s) 1779, 2286, 2330, 2384, 2547, 2562, 2883
BfmI CTRYAG 4 cut(s) 183, 804, 1660, 2045
BfoI RGCGCY 2 cut(s) 300, 1857
BglI GCCNNNNNGGC 1 cut(s) 1582
BglII AGATCT 1 cut(s) 1798
BlpI GCTNAGC 2 cut(s) 76, 1188
BmcAI AGTACT 3 cut(s) 538, 799, 1753
Bme1390I CCNGG 7 cut(s) 82, 233, 526, 1732, 2495, 2800, 2801
BmeT110I CYCGRG 1 cut(s) 2799
BmgT120I GGNCC 6 cut(s) 162, 228, 229, 253, 387, 388
BmiI GGNNCC 7 cut(s) 230, 298, 389, 969, 1866, 1947, 2837
BmrFI CCNGG 7 cut(s) 82, 233, 526, 1732, 2495, 2800, 2801
BmrI ACTGGG 1 cut(s) 2599
BmsI GCATC 4 cut(s) 340, 1295, 1797, 2353
BmtI GCTAGC 1 cut(s) 2565
BmuI ACTGGG 1 cut(s) 2599
BpiI GAAGAC 2 cut(s) 1337, 2763
BplI GAGNNNNNCTC 2 cut(s) 551, 583
BpmI CTGGAG 1 cut(s) 254
Bpu10I CCTNAGC 4 cut(s) 7, 99, 933, 2202
Bpu1102I GCTNAGC 2 cut(s) 76, 1188
Bpu14I TTCGAA 1 cut(s) 1914
BpuEI CTTGAG 5 cut(s) 124, 485, 1231, 1349, 2674
BpuMI CCSGG 4 cut(s) 526, 1732, 2800, 2801
BsaAI YACGTR 1 cut(s) 118
BsaBI GATNNNNATC 1 cut(s) 2436
BsaHI GRCGYC 1 cut(s) 297
BsaWI WCCGGW 1 cut(s) 284
BsaXI ACNNNNNCTCC 4 cut(s) 262, 292, 1149, 1179
Bsc4I CCNNNNNNNGG 7 cut(s) 40, 100, 284, 287, 1370, 2552, 3076
Bse118I RCCGGY 1 cut(s) 2735
Bse21I CCTNAGG 1 cut(s) 972
Bse3DI GCAATG 1 cut(s) 369
Bse8I GATNNNNATC 1 cut(s) 2436
BseAI TCCGGA 1 cut(s) 284
BseBI CCWGG 3 cut(s) 82, 233, 2495
BseGI GGATG 5 cut(s) 496, 1436, 1624, 1825, 2821
BseJI GATNNNNATC 1 cut(s) 2436
BseLI CCNNNNNNNGG 7 cut(s) 40, 100, 284, 287, 1370, 2552, 3076
BseMI GCAATG 1 cut(s) 369
BseRI GAGGAG 6 cut(s) 99, 122, 559, 1110, 1651, 3008
BseSI GKGCMC 2 cut(s) 232, 391
BseYI CCCAGC 2 cut(s) 1183, 2878
BsgI GTGCAG 3 cut(s) 44, 981, 1652
BshNI GGYRCC 2 cut(s) 296, 1864
BsiHKAI GWGCWC 2 cut(s) 240, 1071
BsiHKCI CYCGRG 1 cut(s) 2799
BsiSI CCGG 5 cut(s) 285, 525, 1731, 2736, 2800
BslFI GGGAC 1 cut(s) 2816
BslI CCNNNNNNNGG 7 cut(s) 40, 100, 284, 287, 1370, 2552, 3076
BsmAI GTCTC 6 cut(s) 173, 1116, 1171, 1391, 1873, 2144
BsmFI GGGAC 1 cut(s) 2816
BsmI GAATGC 1 cut(s) 1523
BsoBI CYCGRG 1 cut(s) 2799
Bsp119I TTCGAA 1 cut(s) 1914
Bsp120I GGGCCC 2 cut(s) 228, 387
Bsp1286I GDGCHC 6 cut(s) 232, 240, 391, 1071, 1927, 3164
Bsp13I TCCGGA 1 cut(s) 284
Bsp1407I TGTACA 1 cut(s) 2941
Bsp1720I GCTNAGC 2 cut(s) 76, 1188
BspEI TCCGGA 1 cut(s) 284
BspHI TCATGA 1 cut(s) 1480
BspLI GGNNCC 7 cut(s) 230, 298, 389, 969, 1866, 1947, 2837
BspMAI CTGCAG 3 cut(s) 187, 808, 2049
BspOI GCTAGC 1 cut(s) 2565
BspPI GGATC 2 cut(s) 1092, 1485
BspT104I TTCGAA 1 cut(s) 1914
BspT107I GGYRCC 2 cut(s) 296, 1864
BsrDI GCAATG 1 cut(s) 369
BsrFI RCCGGY 1 cut(s) 2735
BsrGI TGTACA 1 cut(s) 2941
BssAI RCCGGY 1 cut(s) 2735
BssNAI GTATAC 1 cut(s) 3104
BssNI GRCGYC 1 cut(s) 297
BssT1I CCWWGG 6 cut(s) 825, 1672, 1766, 2087, 2446, 2466
Bst1107I GTATAC 1 cut(s) 3104
Bst2UI CCWGG 3 cut(s) 82, 233, 2495
Bst4CI ACNGT 5 cut(s) 872, 889, 1664, 2370, 2711
Bst6I CTCTTC 6 cut(s) 222, 400, 634, 1031, 2422, 2622
BstACI GRCGYC 1 cut(s) 297
BstAPI GCANNNNNTGC 1 cut(s) 1573
BstAUI TGTACA 1 cut(s) 2941
BstBAI YACGTR 1 cut(s) 118
BstBI TTCGAA 1 cut(s) 1914
BstC8I GCNNGC 6 cut(s) 162, 329, 1565, 1578, 1846, 2563
BstDSI CCRYGG 2 cut(s) 322, 2811
BstF5I GGATG 5 cut(s) 496, 1436, 1624, 1825, 2821
BstH2I RGCGCY 2 cut(s) 300, 1857
BstHHI GCGC 3 cut(s) 6, 299, 1856
BstMAI GTCTC 6 cut(s) 173, 1116, 1171, 1391, 1873, 2144
BstNI CCWGG 3 cut(s) 82, 233, 2495
BstNSI RCATGY 2 cut(s) 1019, 2062
BstSCI CCNGG 7 cut(s) 80, 231, 524, 1730, 2493, 2798, 2799
BstSFI CTRYAG 4 cut(s) 183, 804, 1660, 2045
BstSLI GKGCMC 2 cut(s) 232, 391
BstV2I GAAGAC 2 cut(s) 1337, 2763
BstX2I RGATCY 1 cut(s) 1798
BstXI CCANNNNNNTGG 1 cut(s) 1266
BstYI RGATCY 1 cut(s) 1798
BstZ17I GTATAC 1 cut(s) 3104
Bsu36I CCTNAGG 1 cut(s) 972
BtgI CCRYGG 2 cut(s) 322, 2811
BtgZI GCGATG 1 cut(s) 1863
BtsCI GGATG 5 cut(s) 496, 1436, 1624, 1825, 2821
BtsIMutI CAGTG 7 cut(s) 605, 612, 885, 1405, 1978, 2046, 2326
Cac8I GCNNGC 6 cut(s) 162, 329, 1565, 1578, 1846, 2563
CaiI CAGNNNCTG 2 cut(s) 812, 1841
CciI TCATGA 1 cut(s) 1480
CfoI GCGC 3 cut(s) 6, 299, 1856
Cfr10I RCCGGY 1 cut(s) 2735
Cfr13I GGNCC 6 cut(s) 162, 228, 229, 253, 387, 388
Cfr9I CCCGGG 1 cut(s) 2799
Csp6I GTAC 9 cut(s) 537, 798, 1030, 1711, 1752, 1762, 2491, 2538, 2942
CviQI GTAC 9 cut(s) 537, 798, 1030, 1711, 1752, 1762, 2491, 2538, 2942
DinI GGCGCC 1 cut(s) 298
EaeI YGGCCR 3 cut(s) 120, 325, 1561
Eam1104I CTCTTC 6 cut(s) 222, 400, 634, 1031, 2422, 2622
EarI CTCTTC 6 cut(s) 222, 400, 634, 1031, 2422, 2622
EciI GGCGGA 1 cut(s) 100
Ecl136II GAGCTC 2 cut(s) 238, 1069
Eco130I CCWWGG 6 cut(s) 825, 1672, 1766, 2087, 2446, 2466
Eco147I AGGCCT 1 cut(s) 924
Eco24I GRGCYC 6 cut(s) 232, 240, 391, 1071, 1927, 3164
Eco32I GATATC 1 cut(s) 3000
Eco53kI GAGCTC 2 cut(s) 238, 1069
Eco57I CTGAAG 3 cut(s) 80, 939, 1623
Eco72I CACGTG 1 cut(s) 118
Eco81I CCTNAGG 1 cut(s) 972
Eco88I CYCGRG 1 cut(s) 2799
EcoICRI GAGCTC 2 cut(s) 238, 1069
EcoO109I RGGNCCY 3 cut(s) 228, 229, 387
EcoRI GAATTC 1 cut(s) 1804
EcoRII CCWGG 3 cut(s) 80, 231, 2493
EcoRV GATATC 1 cut(s) 3000
EcoT14I CCWWGG 6 cut(s) 825, 1672, 1766, 2087, 2446, 2466
EcoT38I GRGCYC 6 cut(s) 232, 240, 391, 1071, 1927, 3164
EgeI GGCGCC 1 cut(s) 298
EheI GGCGCC 1 cut(s) 298
ErhI CCWWGG 6 cut(s) 825, 1672, 1766, 2087, 2446, 2466
FalI AAGNNNNNCTT 4 cut(s) 539, 571, 2669, 2701
FaqI GGGAC 1 cut(s) 2816
FauI CCCGC 4 cut(s) 153, 207, 1711, 3083
FbaI TGATCA 1 cut(s) 1822
FblI GTMKAC 1 cut(s) 3103
FokI GGATG 5 cut(s) 503, 1423, 1631, 1812, 2828
FriOI GRGCYC 6 cut(s) 232, 240, 391, 1071, 1927, 3164
FspBI CTAG 7 cut(s) 1779, 2286, 2330, 2384, 2547, 2562, 2883
GlaI GCGC 3 cut(s) 5, 298, 1855
GsaI CCCAGC 2 cut(s) 1187, 2882
GsuI CTGGAG 1 cut(s) 254
HaeII RGCGCY 2 cut(s) 300, 1857
HapII CCGG 5 cut(s) 285, 525, 1731, 2736, 2800
HhaI GCGC 3 cut(s) 6, 299, 1856
Hin1I GRCGYC 1 cut(s) 297
Hin6I GCGC 3 cut(s) 4, 297, 1854
HinP1I GCGC 3 cut(s) 4, 297, 1854
HincII GTYRAC 2 cut(s) 1420, 1776
HindII GTYRAC 2 cut(s) 1420, 1776
HindIII AAGCTT 3 cut(s) 1723, 2066, 2701
HpaI GTTAAC 1 cut(s) 1420
HpaII CCGG 5 cut(s) 285, 525, 1731, 2736, 2800
HphI GGTGA 8 cut(s) 200, 326, 633, 871, 911, 2483, 2750, 2785
Hpy166II GTNNAC 6 cut(s) 641, 1134, 1420, 1776, 2942, 3104
Hpy8I GTNNAC 6 cut(s) 641, 1134, 1420, 1776, 2942, 3104
HpyCH4III ACNGT 5 cut(s) 872, 889, 1664, 2370, 2711
HpyCH4IV ACGT 1 cut(s) 117
HpySE526I ACGT 1 cut(s) 117
Hsp92I GRCGYC 1 cut(s) 297
HspAI GCGC 3 cut(s) 4, 297, 1854
KasI GGCGCC 1 cut(s) 296
Kpn2I TCCGGA 1 cut(s) 284
Ksp22I TGATCA 1 cut(s) 1822
KspAI GTTAAC 1 cut(s) 1420
LmnI GCTCC 6 cut(s) 235, 655, 794, 1506, 2138, 2593
LweI GCATC 4 cut(s) 340, 1295, 1797, 2353
MaeI CTAG 7 cut(s) 1779, 2286, 2330, 2384, 2547, 2562, 2883
MaeII ACGT 1 cut(s) 117
MaeIII GTNAC 4 cut(s) 103, 765, 2321, 2711
MfeI CAATTG 1 cut(s) 1899
MflI RGATCY 1 cut(s) 1798
MhlI GDGCHC 6 cut(s) 232, 240, 391, 1071, 1927, 3164
MlsI TGGCCA 1 cut(s) 1563
MluNI TGGCCA 1 cut(s) 1563
Mly113I GGCGCC 1 cut(s) 297
MlyI GAGTC 7 cut(s) 258, 818, 1393, 2171, 2483, 2785, 2798
Mox20I TGGCCA 1 cut(s) 1563
MroI TCCGGA 1 cut(s) 284
MroXI GAANNNNTTC 3 cut(s) 2103, 2684, 2858
MscI TGGCCA 1 cut(s) 1563
MseI TTAA 2 cut(s) 1419, 1727
Msp20I TGGCCA 1 cut(s) 1563
MspA1I CMGCKG 3 cut(s) 41, 182, 1187
MspI CCGG 5 cut(s) 285, 525, 1731, 2736, 2800
MspR9I CCNGG 7 cut(s) 82, 233, 526, 1732, 2495, 2800, 2801
MunI CAATTG 1 cut(s) 1899
Mva1269I GAATGC 1 cut(s) 1523
MvaI CCWGG 3 cut(s) 82, 233, 2495
NarI GGCGCC 1 cut(s) 297
NciI CCSGG 4 cut(s) 526, 1732, 2800, 2801
NheI GCTAGC 1 cut(s) 2561
NlaIV GGNNCC 7 cut(s) 230, 298, 389, 969, 1866, 1947, 2837
NmuCI GTSAC 2 cut(s) 103, 2321
NspI RCATGY 2 cut(s) 1019, 2062
NspV TTCGAA 1 cut(s) 1914
PagI TCATGA 1 cut(s) 1480
PceI AGGCCT 1 cut(s) 924
PciI ACATGT 2 cut(s) 1015, 2058
PcsI WCGNNNNNNNCGW 1 cut(s) 2847
PctI GAATGC 1 cut(s) 1523
PdmI GAANNNNTTC 3 cut(s) 2103, 2684, 2858
PleI GAGTC 7 cut(s) 258, 817, 1392, 2171, 2482, 2784, 2798
PluTI GGCGCC 1 cut(s) 300
PmaCI CACGTG 1 cut(s) 118
PmlI CACGTG 1 cut(s) 118
PpsI GAGTC 7 cut(s) 258, 817, 1392, 2171, 2482, 2784, 2798
Ppu21I YACGTR 1 cut(s) 118
PscI ACATGT 2 cut(s) 1015, 2058
PsiI TTATAA 1 cut(s) 606
Psp124BI GAGCTC 2 cut(s) 240, 1071
Psp6I CCWGG 3 cut(s) 80, 231, 2493
PspCI CACGTG 1 cut(s) 118
PspFI CCCAGC 2 cut(s) 1183, 2878
PspGI CCWGG 3 cut(s) 80, 231, 2493
PspN4I GGNNCC 7 cut(s) 230, 298, 389, 969, 1866, 1947, 2837
PspOMI GGGCCC 2 cut(s) 228, 387
PspPI GGNCC 6 cut(s) 162, 228, 229, 253, 387, 388
PstI CTGCAG 3 cut(s) 187, 808, 2049
PstNI CAGNNNCTG 2 cut(s) 812, 1841
PsuI RGATCY 1 cut(s) 1798
PvuII CAGCTG 1 cut(s) 1187
RsaI GTAC 9 cut(s) 538, 799, 1031, 1712, 1753, 1763, 2492, 2539, 2943
RsaNI GTAC 9 cut(s) 537, 798, 1030, 1711, 1752, 1762, 2491, 2538, 2942
SacI GAGCTC 2 cut(s) 240, 1071
SaqAI TTAA 2 cut(s) 1419, 1727
Sau96I GGNCC 6 cut(s) 162, 228, 229, 253, 387, 388
ScaI AGTACT 3 cut(s) 538, 799, 1753
SchI GAGTC 7 cut(s) 258, 818, 1393, 2171, 2483, 2785, 2798
ScrFI CCNGG 7 cut(s) 82, 233, 526, 1732, 2495, 2800, 2801
SduI GDGCHC 6 cut(s) 232, 240, 391, 1071, 1927, 3164
SfaNI GCATC 4 cut(s) 340, 1295, 1797, 2353
SfcI CTRYAG 4 cut(s) 183, 804, 1660, 2045
SfoI GGCGCC 1 cut(s) 298
SfuI TTCGAA 1 cut(s) 1914
SmaI CCCGGG 1 cut(s) 2801
SmlI CTYRAG 5 cut(s) 139, 464, 1246, 1328, 2689
SmoI CTYRAG 5 cut(s) 139, 464, 1246, 1328, 2689
SseBI AGGCCT 1 cut(s) 924
SspDI GGCGCC 1 cut(s) 296
SspI AATATT 1 cut(s) 2454
SspMI CTAG 7 cut(s) 1779, 2286, 2330, 2384, 2547, 2562, 2883
SstI GAGCTC 2 cut(s) 240, 1071
StuI AGGCCT 1 cut(s) 924
StyD4I CCNGG 7 cut(s) 80, 231, 524, 1730, 2493, 2798, 2799
StyI CCWWGG 6 cut(s) 825, 1672, 1766, 2087, 2446, 2466
TaaI ACNGT 5 cut(s) 872, 889, 1664, 2370, 2711
TaiI ACGT 1 cut(s) 120
TatI WGTACW 4 cut(s) 536, 797, 1751, 2941
TauI GCSGC 5 cut(s) 125, 182, 297, 302, 442
Tru1I TTAA 2 cut(s) 1419, 1727
Tru9I TTAA 2 cut(s) 1419, 1727
TscAI CASTG 7 cut(s) 605, 619, 892, 1405, 1978, 2046, 2326
TseFI GTSAC 2 cut(s) 103, 2321
Tsp45I GTSAC 2 cut(s) 103, 2321
TspGWI ACGGA 1 cut(s) 2828
TspMI CCCGGG 1 cut(s) 2799
TspRI CASTG 7 cut(s) 605, 619, 892, 1405, 1978, 2046, 2326
XapI RAATTY 5 cut(s) 691, 1206, 1804, 2378, 3186
XceI RCATGY 2 cut(s) 1019, 2062
XcmI CCANNNNNNNNNTGG 1 cut(s) 2828
XmaI CCCGGG 1 cut(s) 2799
XmiI GTMKAC 1 cut(s) 3103
XmnI GAANNNNTTC 3 cut(s) 2103, 2684, 2858
XspI CTAG 7 cut(s) 1779, 2286, 2330, 2384, 2547, 2562, 2883
ZrmI AGTACT 3 cut(s) 538, 799, 1753
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.