Rw4G007620

vascular transport

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr4
OG0011356
Physical Location & Seq
Reverse (-)
16400725 .. 16405316
4592 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw4G007620.1

Sequence Viewer

Length: 3183 bp
ATGCGCTCAGGAGGTTGTGCGGTGCAGCAGACCCTCACAGCGGAGGCTGCTTCGGTTCTGAAGCACTCTCTCAGCTTAGCCAGGCGGAGAGGCCATGCTCAGGTCACTCCTCTCCACGTGGCCGCCACTCTCCTCGCCTCAAGAACCAGTCTCTTGAGGCGGGCCTGTCTCAAAGCTGCCGCAGCAGCCAACCACAACCCGCCACATCACCACCCTCTCCAATGCAGGGCCCTGGAGCTCTGCTTCAATGTGGCGCTTAACAGGCTCCCCACTACACCTCCCTCAGGAGGTGGCGGCGCCGCCAGTCCCCTACTGGTCAACCACGGTCAGCACCACCAGCAGCAACAGCCTTCTCTCTCCAATGCTCTCATTGCAGCTCTCAAAAGAGCCCAAGCTCACCAGAGAAGGGGGTGCATAGAGCAGCAGAATCAGCAGCAGCCACTTTTGACGATCAAGGTTGAGCTTGAGCAGCTGATCATCTCCATCTTAGATGACCCAAGTGTTAGCCGGGTTATGAGGGAAGCCGGGTTCTCAAGTACTTCAGTCAAGAACAACTTAGAGGACACCTCCTCTGTTTCCTCTGTTTCCTCTGTTTTCCAGTGTTATAATAGCACTGGTGGGGTTTTCTCTTCTCCTTGTTCACCTACCGCTCCTGAAAACTTAACCCATCATCATATCAGTCCATCTGGGAATTTCTGGCAAACCCATTTCTTGACTTACACTTCTGAGCAAAACCCACTCCTCTTTTCTTCCCCACCAAAGAAATTACTTCTTCCATTCAATGTCAGCTCCATTAGTACTCCTACAGAGTCTGTCTCTTATTCCAAGGAAGATGTTAAGTTGGTGTTTGAGGTTTTGGTGAGGAAGAACAGTAAGAAAAGGAACACTGTGATTGTGGGTGATTCTGTGTCCATTACTGAAGGCCTTGTTGCTGAGGTCATGGGGAGGTTAGAGAGAGGGTCAGAGGTTCCTGAGGAACTGAAATCAACCCATTTCATCAAATTTCAGTTTCCACATGTTTCTTTGAGGTACATGAAAAGAGAAGATGTGGAATCAAATATCACAGAGCTCAAAAGGAAATTGGATCACTCTGGAGGAGGTGGTGCTATTATTTACATTGGAGACTTGAAATGGACAATTGGTGATGAGAGAGAAGGAGGATTAGTCTCTGGTGGGTATAGCCCAGTTGAGCATTTAGTTTCAGAAATTTCAAGGTTGGTTTCAGATTATGAAAGCAGCTCATGCTCAAGCACAAAGCCAAAGGTGTGGCTAATGGCTACTGCTAGTTATCAAACATACATGAGATGCCAAATGAGGCAACCTTCTCTTGAGATTCAATGGGGTCTTCAAGCTGTTTCAGTACCATCAGGAGGTCTTGGTTTGAGTCTCCATGCTTCCAGTGTCCATGATTCGAGAGTAATCTTTTCTCAAAACCCATCTGAAGTGCTGGAAACAAAGCCATTCAGTAGCAGCAAGGATCATGAACAAGATCATAGTAAGCTCCCCTGCTGTGAAGAATGCACTTCAAATTATGAGAAAGAAGCTCAGTTGCTCAAATCTGGCCAGCAGAAATTGCCTGCCTGGCTTCAACCACATGGCACCCAAGCCTGTCAAAAGGATGAAGTGGTTGAATTGAGGAGAAAGTGGAACAGGTTATGCTACAGTCTGCACCAAGGAAGGCATAATCCGAATCATTCAAGCCCCGCTTTGTATAACCATCAAAACTCAATTGGGAAGAACCACTCTTATAGTACTTCATCGTACCCTTGGTTGTCAACCAGGAATGGCATCTTCCCAGATCTGAATTCGATCTCTTTTGCTGATCATCCAGCTTCAGACCCTGCAACCCATGGCTCTAATCTGGTGCCTCGGTTCAGGAGACAACAATCATGTAGTACAATCGAATTCAATTTCGATAATGGGGTTCAAAAGCATGAAGTAGTGGAACCAACCTTGGATTCTTTGAAACTCAGTGAAGATAAGGAAGTGAAGATCACACTTGCTCTCGGCAACTCTGTGTTATCTGATTCAGGAAAATCGACGGTGCAGAGAGCTGACATGTGTAAGCTTTTGAAAGAGAATGTGCCTTGGCAATCTGAATCCATTCCCTCAATAGTAGAAGCCATAATCGGCTCCAAACCATGTTCGGAAACTTGGTTTCTGATTGATGGGAATGACTCGATTGGAAAGAGAAGGTTGGCTCAAGCAATAGCAGAGTTGGTTCTGGGATCTGCTAATTCACTCTTACATATCAACATGAACAAAAGAGAAGATGAGATGCACCCAAGAGTGGAAAAACTAAAAAAAGCCTTGAAATCCAGTGACAAACTTGTTGTGTTGGTAGAAGATGTTGATTTGGCTGATACCCAGTTCTTAAAATTCCTAGCTGATCGAAAATGTGGAGAAGTGAGTAGAAGAGATGGGAATCAAGGCCAAGCAATATTCATTTTGACCAAGGGTGAGTCCACAAGAAATGAGTACCCAGGTTCTATAATCCAAATGAAGTTGAAAGTTGATGAAAAAAGTACTAGTCCTAGTTTTGGGATCGCCAGCTTCGAACACAAGCGAAAAGCTGAGTGGGAGCTTGAAAACAAGACCAAATCAACAAGATTTGAAGAAAAGGAGGATTCAAGTGTGGTTGTTGCCTTTGAGAATGTGAATAGCAAGAAGGACTTCTCAAGGCAATCAAGCTTCAACAGTAACCTTGATCTAAACCTCAAAGCCGGTGAGGACAATGAAATCGAAGACAATGCAGGGGAGGTTAGCCCTATTTCAAGTGATTTGACCCGCGACTCTGCCACGGATGTCCAAACCCCACTTGGGTTCCTCGAATCAGTCGAGAACCTCTTCGTTTTCAATCGAAGCCCAGCTAGAGATCGGGAGGCCACCGAGCTTTTCTTGTCCAAGATTGAGGGGTGCTTTGAGGGTGTATATGGGAAACAAAATGGGGTTAGTTTTAGTGTGGATAAGAGGGTGTTAGAAGAGATATCTGTTGGGTCTGGTTCTTTTCCCAATAGCTTGTTTGAGAAATGGCTAAGAGGTATTTTTCAAACAAGCCTAAAATCGGTTAAATTTGGCGGGAAGGAGGGTATACTTGTAAGGCTATGTTTGGGGGGTACAGAAGAAGGCATTTTGGAGGGTTTCTTGGGCTCTTGTCTTCCCAAGAAAATCCAAATTTCTTGA

Protein Analysis

1060

Amino Acids

117.04

Weight (kDa)

7.21

Isoelectric Point (pI)

49.21

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NBD_SMAX1 PF23569 275 - 467 9.4e-81 SMAX1 nucleotide binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0011356)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G29920 AT4G29920
fragaria_vesca FvH4_4g07050 FvH4_4g07050
malus_domestica MD00G1086800.v1.1 MD16G1247100.v1.1
prunus_persica Prupe.1G073700_v2.0.a1
pyrus_communis pycom13g21290 pycom16g20740
rosa_chinensis RchiOBHm_Chr4g0399171
rosa_laevigata RLG00000009293
rosa_multiflora Rmu_sc0002062.1_g000001 Rmu_sc0006088.1_g000002
rosa_roxburghii Rroxscaffold_5G00344130
rosa_rugosa Rorug04G0014600
rosa_samantha Rh4AG092500 Rh4BG090500 Rh4CG101000 Rh4DG084900
rosa_wichuraiana Rw4G007620

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 606
AccB1I GGYRCC 3 cut(s) 296, 1598, 1864
AccBSI CCGCTC 1 cut(s) 650
AccI GTMKAC 1 cut(s) 3091
AccII CGCG 1 cut(s) 2790
AclWI GGATC 4 cut(s) 1092, 1485, 2236, 2552
AcoI YGGCCR 2 cut(s) 120, 1561
AcsI RAATTY 8 cut(s) 691, 1001, 1206, 1804, 1904, 2378, 3071, 3174
AcuI CTGAAG 5 cut(s) 80, 525, 939, 1461, 1818
AcvI CACGTG 1 cut(s) 118
AcyI GRCGYC 1 cut(s) 297
AflIII ACRYGT 2 cut(s) 1015, 2058
AhlI ACTAGT 1 cut(s) 2528
AjnI CCWGG 5 cut(s) 80, 231, 1580, 1778, 2482
AjuI GAANNNNNNNTTGG 2 cut(s) 1942, 1974
AloI GAACNNNNNNTCC 2 cut(s) 512, 544
Alw21I GWGCWC 2 cut(s) 240, 1071
Alw26I GTCTC 7 cut(s) 155, 173, 820, 1116, 1171, 1391, 1873
AlwI GGATC 4 cut(s) 1092, 1485, 2236, 2552
AlwNI CAGNNNCTG 2 cut(s) 812, 1841
AoxI GGCC 8 cut(s) 91, 120, 162, 228, 922, 1561, 2431, 2883
ApaI GGGCCC 1 cut(s) 232
ApoI RAATTY 8 cut(s) 691, 1001, 1206, 1804, 1904, 2378, 3071, 3174
Asp700I GAANNNNTTC 3 cut(s) 2103, 2672, 2846
AspLEI GCGC 3 cut(s) 6, 256, 299
AspS9I GGNCC 3 cut(s) 162, 228, 229
AsuC2I CCSGG 2 cut(s) 509, 526
AsuHPI GGTGA 8 cut(s) 200, 389, 633, 871, 911, 1154, 2471, 2738
AsuII TTCGAA 1 cut(s) 2556
AxyI CCTNAGG 2 cut(s) 283, 972
BaeGI GKGCMC 1 cut(s) 232
BalI TGGCCA 1 cut(s) 1563
BanI GGYRCC 3 cut(s) 296, 1598, 1864
BanII GRGCYC 5 cut(s) 232, 240, 391, 1071, 3152
BbrPI CACGTG 1 cut(s) 118
BbsI GAAGAC 3 cut(s) 1337, 2751, 3149
Bbv12I GWGCWC 2 cut(s) 240, 1071
BbvCI CCTCAGC 1 cut(s) 933
BccI CCATC 8 cut(s) 491, 675, 691, 1372, 1444, 1725, 2162, 2414
BcgI CGANNNNNNTGC 2 cut(s) 2732, 2766
BciT130I CCWGG 5 cut(s) 82, 233, 1582, 1780, 2484
BclI TGATCA 2 cut(s) 474, 1822
BcnI CCSGG 2 cut(s) 509, 526
BcoDI GTCTC 7 cut(s) 155, 173, 820, 1116, 1171, 1391, 1873
BcuI ACTAGT 1 cut(s) 2528
BfaI CTAG 5 cut(s) 1284, 2384, 2529, 2535, 2871
BfmI CTRYAG 2 cut(s) 804, 1660
BfoI RGCGCY 2 cut(s) 257, 300
BglI GCCNNNNNGGC 1 cut(s) 1582
BglII AGATCT 1 cut(s) 1798
BlpI GCTNAGC 1 cut(s) 76
BmcAI AGTACT 4 cut(s) 538, 799, 1753, 2527
Bme1390I CCNGG 7 cut(s) 82, 233, 509, 526, 1582, 1780, 2484
BmgT120I GGNCC 3 cut(s) 162, 228, 229
BmiI GGNNCC 9 cut(s) 230, 266, 298, 969, 1600, 1866, 1947, 2134, 2825
BmrFI CCNGG 7 cut(s) 82, 233, 509, 526, 1582, 1780, 2484
BmrI ACTGGG 2 cut(s) 1178, 2362
BmsI GCATC 3 cut(s) 1295, 1797, 2268
BmuI ACTGGG 2 cut(s) 1178, 2362
BpiI GAAGAC 3 cut(s) 1337, 2751, 3149
BplI GAGNNNNNCTC 4 cut(s) 551, 583, 800, 832
BpmI CTGGAG 2 cut(s) 254, 1113
Bpu10I CCTNAGC 3 cut(s) 7, 99, 933
Bpu1102I GCTNAGC 1 cut(s) 76
Bpu14I TTCGAA 1 cut(s) 2556
BpuEI CTTGAG 8 cut(s) 124, 175, 485, 517, 1231, 1349, 2187, 2662
BpuMI CCSGG 2 cut(s) 509, 526
BsaAI YACGTR 1 cut(s) 118
BsaBI GATNNNNATC 1 cut(s) 2424
BsaHI GRCGYC 1 cut(s) 297
BsaXI ACNNNNNCTCC 4 cut(s) 262, 292, 1149, 1179
Bse118I RCCGGY 1 cut(s) 2723
Bse1I ACTGG 9 cut(s) 147, 303, 318, 598, 619, 1184, 1398, 2319, 2368
Bse21I CCTNAGG 2 cut(s) 283, 972
Bse3DI GCAATG 1 cut(s) 369
Bse8I GATNNNNATC 1 cut(s) 2424
BseBI CCWGG 5 cut(s) 82, 233, 1582, 1780, 2484
BseGI GGATG 3 cut(s) 1624, 1825, 2809
BseJI GATNNNNATC 1 cut(s) 2424
BseMI GCAATG 1 cut(s) 369
BseNI ACTGG 9 cut(s) 147, 303, 318, 598, 619, 1184, 1398, 2319, 2368
BseRI GAGGAG 6 cut(s) 99, 122, 559, 731, 1110, 1651
BseSI GKGCMC 1 cut(s) 232
BseYI CCCAGC 1 cut(s) 2866
BsgI GTGCAG 3 cut(s) 44, 1652, 2066
Bsh1236I CGCG 1 cut(s) 2790
BshFI GGCC 8 cut(s) 93, 122, 164, 230, 924, 1563, 2433, 2885
BshNI GGYRCC 3 cut(s) 296, 1598, 1864
BsiHKAI GWGCWC 2 cut(s) 240, 1071
BsiSI CCGG 3 cut(s) 508, 525, 2724
BslFI GGGAC 1 cut(s) 291
BsmAI GTCTC 7 cut(s) 155, 173, 820, 1116, 1171, 1391, 1873
BsmFI GGGAC 1 cut(s) 291
BsmI GAATGC 1 cut(s) 1523
BsnI GGCC 8 cut(s) 93, 122, 164, 230, 924, 1563, 2433, 2885
Bsp119I TTCGAA 1 cut(s) 2556
Bsp120I GGGCCC 1 cut(s) 228
Bsp1286I GDGCHC 5 cut(s) 232, 240, 391, 1071, 3152
Bsp1720I GCTNAGC 1 cut(s) 76
Bsp19I CCATGG 1 cut(s) 1849
BspANI GGCC 8 cut(s) 93, 122, 164, 230, 924, 1563, 2433, 2885
BspFNI CGCG 1 cut(s) 2790
BspHI TCATGA 1 cut(s) 1480
BspLI GGNNCC 9 cut(s) 230, 266, 298, 969, 1600, 1866, 1947, 2134, 2825
BspPI GGATC 4 cut(s) 1092, 1485, 2236, 2552
BspT104I TTCGAA 1 cut(s) 2556
BspT107I GGYRCC 3 cut(s) 296, 1598, 1864
BsrBI CCGCTC 1 cut(s) 650
BsrDI GCAATG 1 cut(s) 369
BsrFI RCCGGY 1 cut(s) 2723
BsrI ACTGG 9 cut(s) 147, 303, 318, 598, 619, 1184, 1398, 2319, 2368
BssAI RCCGGY 1 cut(s) 2723
BssNAI GTATAC 1 cut(s) 3092
BssNI GRCGYC 1 cut(s) 297
BssT1I CCWWGG 7 cut(s) 825, 1672, 1766, 1849, 1953, 2087, 2454
Bst1107I GTATAC 1 cut(s) 3092
Bst2UI CCWGG 5 cut(s) 82, 233, 1582, 1780, 2484
Bst4CI ACNGT 6 cut(s) 326, 872, 889, 1664, 2044, 2699
Bst6I CTCTTC 4 cut(s) 634, 2410, 2852, 2976
BstACI GRCGYC 1 cut(s) 297
BstAPI GCANNNNNTGC 2 cut(s) 1242, 1573
BstBAI YACGTR 1 cut(s) 118
BstBI TTCGAA 1 cut(s) 2556
BstC8I GCNNGC 4 cut(s) 162, 1565, 1578, 2551
BstDSI CCRYGG 3 cut(s) 322, 1849, 2799
BstENI CCTNNNNNAGG 1 cut(s) 282
BstF5I GGATG 3 cut(s) 1624, 1825, 2809
BstFNI CGCG 1 cut(s) 2790
BstH2I RGCGCY 2 cut(s) 257, 300
BstHHI GCGC 3 cut(s) 6, 256, 299
BstMAI GTCTC 7 cut(s) 155, 173, 820, 1116, 1171, 1391, 1873
BstNI CCWGG 5 cut(s) 82, 233, 1582, 1780, 2484
BstNSI RCATGY 2 cut(s) 1019, 2062
BstSCI CCNGG 7 cut(s) 80, 231, 507, 524, 1580, 1778, 2482
BstSFI CTRYAG 2 cut(s) 804, 1660
BstSLI GKGCMC 1 cut(s) 232
BstUI CGCG 1 cut(s) 2790
BstV2I GAAGAC 3 cut(s) 1337, 2751, 3149
BstX2I RGATCY 2 cut(s) 1798, 2228
BstXI CCANNNNNNTGG 1 cut(s) 1266
BstYI RGATCY 2 cut(s) 1798, 2228
BstZ17I GTATAC 1 cut(s) 3092
Bsu36I CCTNAGG 2 cut(s) 283, 972
BsuRI GGCC 8 cut(s) 93, 122, 164, 230, 924, 1563, 2433, 2885
BtgI CCRYGG 3 cut(s) 322, 1849, 2799
BtsCI GGATG 3 cut(s) 1624, 1825, 2809
BtsIMutI CAGTG 6 cut(s) 605, 612, 885, 1405, 1978, 2326
Cac8I GCNNGC 4 cut(s) 162, 1565, 1578, 2551
CaiI CAGNNNCTG 2 cut(s) 812, 1841
CciI TCATGA 1 cut(s) 1480
CfoI GCGC 3 cut(s) 6, 256, 299
Cfr10I RCCGGY 1 cut(s) 2723
Cfr13I GGNCC 3 cut(s) 162, 228, 229
DinI GGCGCC 1 cut(s) 298
EaeI YGGCCR 2 cut(s) 120, 1561
Eam1104I CTCTTC 4 cut(s) 634, 2410, 2852, 2976
EarI CTCTTC 4 cut(s) 634, 2410, 2852, 2976
EciI GGCGGA 1 cut(s) 100
Ecl136II GAGCTC 2 cut(s) 238, 1069
Eco130I CCWWGG 7 cut(s) 825, 1672, 1766, 1849, 1953, 2087, 2454
Eco147I AGGCCT 1 cut(s) 924
Eco24I GRGCYC 5 cut(s) 232, 240, 391, 1071, 3152
Eco32I GATATC 1 cut(s) 2988
Eco53kI GAGCTC 2 cut(s) 238, 1069
Eco57I CTGAAG 5 cut(s) 80, 525, 939, 1461, 1818
Eco72I CACGTG 1 cut(s) 118
Eco81I CCTNAGG 2 cut(s) 283, 972
EcoICRI GAGCTC 2 cut(s) 238, 1069
EcoNI CCTNNNNNAGG 1 cut(s) 282
EcoO109I RGGNCCY 2 cut(s) 228, 229
EcoRI GAATTC 2 cut(s) 1804, 1904
EcoRII CCWGG 5 cut(s) 80, 231, 1580, 1778, 2482
EcoRV GATATC 1 cut(s) 2988
EcoT14I CCWWGG 7 cut(s) 825, 1672, 1766, 1849, 1953, 2087, 2454
EcoT38I GRGCYC 5 cut(s) 232, 240, 391, 1071, 3152
EgeI GGCGCC 1 cut(s) 298
EheI GGCGCC 1 cut(s) 298
ErhI CCWWGG 7 cut(s) 825, 1672, 1766, 1849, 1953, 2087, 2454
FalI AAGNNNNNCTT 6 cut(s) 539, 571, 1690, 1722, 2657, 2689
FaqI GGGAC 1 cut(s) 291
FauI CCCGC 5 cut(s) 153, 207, 1711, 2795, 3071
FbaI TGATCA 2 cut(s) 474, 1822
FblI GTMKAC 1 cut(s) 3091
FokI GGATG 3 cut(s) 1631, 1812, 2816
FriOI GRGCYC 5 cut(s) 232, 240, 391, 1071, 3152
FspBI CTAG 5 cut(s) 1284, 2384, 2529, 2535, 2871
GlaI GCGC 3 cut(s) 5, 255, 298
GsaI CCCAGC 1 cut(s) 2870
GsuI CTGGAG 2 cut(s) 254, 1113
HaeII RGCGCY 2 cut(s) 257, 300
HaeIII GGCC 8 cut(s) 93, 122, 164, 230, 924, 1563, 2433, 2885
HapII CCGG 3 cut(s) 508, 525, 2724
HhaI GCGC 3 cut(s) 6, 256, 299
Hin1I GRCGYC 1 cut(s) 297
Hin6I GCGC 3 cut(s) 4, 254, 297
HinP1I GCGC 3 cut(s) 4, 254, 297
HincII GTYRAC 2 cut(s) 319, 1776
HindII GTYRAC 2 cut(s) 319, 1776
HindIII AAGCTT 2 cut(s) 2066, 2689
HpaII CCGG 3 cut(s) 508, 525, 2724
HphI GGTGA 8 cut(s) 200, 389, 633, 871, 911, 1154, 2471, 2738
Hpy166II GTNNAC 5 cut(s) 319, 641, 1776, 2466, 3092
Hpy8I GTNNAC 5 cut(s) 319, 641, 1776, 2466, 3092
Hpy99I CGWCG 1 cut(s) 2044
HpyCH4III ACNGT 6 cut(s) 326, 872, 889, 1664, 2044, 2699
HpyCH4IV ACGT 1 cut(s) 117
HpySE526I ACGT 1 cut(s) 117
Hsp92I GRCGYC 1 cut(s) 297
HspAI GCGC 3 cut(s) 4, 254, 297
KasI GGCGCC 1 cut(s) 296
Ksp22I TGATCA 2 cut(s) 474, 1822
LmnI GCTCC 7 cut(s) 235, 270, 655, 794, 1506, 2138, 2581
LweI GCATC 3 cut(s) 1295, 1797, 2268
MaeI CTAG 5 cut(s) 1284, 2384, 2529, 2535, 2871
MaeII ACGT 1 cut(s) 117
MaeIII GTNAC 3 cut(s) 103, 2321, 2699
MbiI CCGCTC 1 cut(s) 650
MfeI CAATTG 2 cut(s) 1137, 1728
MflI RGATCY 2 cut(s) 1798, 2228
MhlI GDGCHC 5 cut(s) 232, 240, 391, 1071, 3152
MlsI TGGCCA 1 cut(s) 1563
MluNI TGGCCA 1 cut(s) 1563
Mly113I GGCGCC 1 cut(s) 297
MlyI GAGTC 5 cut(s) 818, 1393, 2171, 2471, 2786
Mox20I TGGCCA 1 cut(s) 1563
MroXI GAANNNNTTC 3 cut(s) 2103, 2672, 2846
MscI TGGCCA 1 cut(s) 1563
MseI TTAA 5 cut(s) 258, 662, 837, 2375, 3069
Msp20I TGGCCA 1 cut(s) 1563
MspA1I CMGCKG 2 cut(s) 41, 472
MspI CCGG 3 cut(s) 508, 525, 2724
MspR9I CCNGG 7 cut(s) 82, 233, 509, 526, 1582, 1780, 2484
MunI CAATTG 2 cut(s) 1137, 1728
Mva1269I GAATGC 1 cut(s) 1523
MvaI CCWGG 5 cut(s) 82, 233, 1582, 1780, 2484
MvnI CGCG 1 cut(s) 2790
NarI GGCGCC 1 cut(s) 297
NciI CCSGG 2 cut(s) 509, 526
NcoI CCATGG 1 cut(s) 1849
NlaIV GGNNCC 9 cut(s) 230, 266, 298, 969, 1600, 1866, 1947, 2134, 2825
NmeAIII GCCGAG 1 cut(s) 1986
NmuCI GTSAC 2 cut(s) 103, 2321
NspI RCATGY 2 cut(s) 1019, 2062
NspV TTCGAA 1 cut(s) 2556
PagI TCATGA 1 cut(s) 1480
PceI AGGCCT 1 cut(s) 924
PciI ACATGT 2 cut(s) 1015, 2058
PcsI WCGNNNNNNNCGW 2 cut(s) 2553, 2835
PctI GAATGC 1 cut(s) 1523
PdmI GAANNNNTTC 3 cut(s) 2103, 2672, 2846
PleI GAGTC 5 cut(s) 817, 1392, 2171, 2470, 2786
PluTI GGCGCC 1 cut(s) 300
PmaCI CACGTG 1 cut(s) 118
PmlI CACGTG 1 cut(s) 118
PpsI GAGTC 5 cut(s) 817, 1392, 2171, 2470, 2786
Ppu21I YACGTR 1 cut(s) 118
PscI ACATGT 2 cut(s) 1015, 2058
PsiI TTATAA 1 cut(s) 606
Psp124BI GAGCTC 2 cut(s) 240, 1071
Psp6I CCWGG 5 cut(s) 80, 231, 1580, 1778, 2482
PspCI CACGTG 1 cut(s) 118
PspFI CCCAGC 1 cut(s) 2866
PspGI CCWGG 5 cut(s) 80, 231, 1580, 1778, 2482
PspN4I GGNNCC 9 cut(s) 230, 266, 298, 969, 1600, 1866, 1947, 2134, 2825
PspOMI GGGCCC 1 cut(s) 228
PspPI GGNCC 3 cut(s) 162, 228, 229
PstNI CAGNNNCTG 2 cut(s) 812, 1841
PsuI RGATCY 2 cut(s) 1798, 2228
PvuII CAGCTG 1 cut(s) 472
SacI GAGCTC 2 cut(s) 240, 1071
SaqAI TTAA 5 cut(s) 258, 662, 837, 2375, 3069
Sau96I GGNCC 3 cut(s) 162, 228, 229
ScaI AGTACT 4 cut(s) 538, 799, 1753, 2527
SchI GAGTC 5 cut(s) 818, 1393, 2171, 2471, 2786
ScrFI CCNGG 7 cut(s) 82, 233, 509, 526, 1582, 1780, 2484
SduI GDGCHC 5 cut(s) 232, 240, 391, 1071, 3152
SfaNI GCATC 3 cut(s) 1295, 1797, 2268
SfcI CTRYAG 2 cut(s) 804, 1660
SfoI GGCGCC 1 cut(s) 298
SfuI TTCGAA 1 cut(s) 2556
SmlI CTYRAG 8 cut(s) 139, 154, 464, 532, 1246, 1328, 2202, 2677
SmoI CTYRAG 8 cut(s) 139, 154, 464, 532, 1246, 1328, 2202, 2677
SpeI ACTAGT 1 cut(s) 2528
SseBI AGGCCT 1 cut(s) 924
SspDI GGCGCC 1 cut(s) 296
SspI AATATT 1 cut(s) 2442
SspMI CTAG 5 cut(s) 1284, 2384, 2529, 2535, 2871
SstI GAGCTC 2 cut(s) 240, 1071
StuI AGGCCT 1 cut(s) 924
StyD4I CCNGG 7 cut(s) 80, 231, 507, 524, 1580, 1778, 2482
StyI CCWWGG 7 cut(s) 825, 1672, 1766, 1849, 1953, 2087, 2454
TaaI ACNGT 6 cut(s) 326, 872, 889, 1664, 2044, 2699
TaiI ACGT 1 cut(s) 120
TatI WGTACW 5 cut(s) 536, 797, 1751, 1895, 2525
TauI GCSGC 4 cut(s) 125, 182, 297, 302
Tru1I TTAA 5 cut(s) 258, 662, 837, 2375, 3069
Tru9I TTAA 5 cut(s) 258, 662, 837, 2375, 3069
TscAI CASTG 6 cut(s) 605, 619, 892, 1405, 1978, 2326
TseFI GTSAC 2 cut(s) 103, 2321
Tsp45I GTSAC 2 cut(s) 103, 2321
TspGWI ACGGA 1 cut(s) 2816
TspRI CASTG 6 cut(s) 605, 619, 892, 1405, 1978, 2326
XagI CCTNNNNNAGG 1 cut(s) 282
XapI RAATTY 8 cut(s) 691, 1001, 1206, 1804, 1904, 2378, 3071, 3174
XceI RCATGY 2 cut(s) 1019, 2062
XcmI CCANNNNNNNNNTGG 2 cut(s) 310, 2816
XmiI GTMKAC 1 cut(s) 3091
XmnI GAANNNNTTC 3 cut(s) 2103, 2672, 2846
XspI CTAG 5 cut(s) 1284, 2384, 2529, 2535, 2871
ZrmI AGTACT 4 cut(s) 538, 799, 1753, 2527
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.