RLG00000009293

vascular transport

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr2
OG0011356
Physical Location & Seq
Forward (+)
50337849 .. 50342098
4250 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000009293

Sequence Viewer

Length: 3186 bp
ATGCGCTCAGGAGGTTGTGCGGTGCAGCAGACCCTCACAGCGGAGGCTGCTTCGGTTCTGAAGCACTCTCTCAGCTTAGCCAGGAGGAGAGGCCATGCTCAGGTCACTCCTCTACACGTGGCCGCCACTCTCCTCGCCTCAAGAACCAGTCTCTTGAGGCGGGCCTGCCTCAAAGCTGCCGCAGCAGCCAACCACAACCCGCCACATCACCACCCTCTCCAATGCAGGGCCCTGGAGCTCTGCTTCAATGTGGCGCTTAACAGGCTCCCCACTACACCTCCCTCAGGAGGTGGCGGCGCCGCCAGTCCTCTGCTGGTCAACCACGGTCAGCACCACCAGCAGCAACAGCCTTCTCTCTCCAATGCTCTCATTGCAGCTCTCAAAAGGGCCCAAGCCCACCAGAGAAGGGGGTGCATAGAGCAGCAGAATCAGCAGCAGCCACTTTTGACGATCAAGGTTGAGCTTGAGCAGCTGATCATCTCCATCTTGGATGACCCAAGTGTTAGCAGGGTTATGAGGGAAGCCGGGTTCTCAAGTACTTCTGTCAAGAACAACTTAGAGGACACCTCCTCTGTTTCCTCTGTTTCCTCTGTTTTCCAGTGTTATAATAGCACTGGTGGGGTTTTCTCTTCTCCTTGTTCACCTACTGCTCCTGAAAACTTAACCCATCATCATATCAGTCCATCTGGGAATTTCTGGCAAACCCATTTCTTGACTTACACTTCTGAGCAAAACCCACTTCTCTTTTCTTCCCCACCAAAGAAATTACTTCTTCCATTCAATGTCAGCTCCATTAGTACTCCTACAGAGTCTGTCTCTTATTCCAAGGAAGATGTTAAGTTGGTGTTTGAGGTTTTGGTGAGGAAGAACAGCAAGAAAAGGAACACTGTGATTGTGGGTGACTCTGTGTCCATTACTGAAGGCCTTGTTTCTGAGGTCATGGGGAGGTTAGAGAGAGGATCAGAGGTTCCTGAGGAACTGAAATCAACCCATTTCATCAAATTTCAGTTTCCACATGTTTCTTTGAGGTTCATGAAAAGAGAAGATGTGGAATCAAATATCACAGAGCTCAAAAGGAAATTGGATCACTCTGGAGGAGGTGGTGGTGCTATTATTTACATTGGAGACTTGAAATGGACAATTGGTGATGAGAAAGAAGGAGGATTAGTCTCTGGTGGGTATAGCCCAGTTGAGCATTTAGTTTCAGAAATTTCAAGGTTGGTTTCAGATTATGAAAGCAGCTCATTCTCAAGCACAAAGCCAAAGGTGTGGCTAATGGCTACTGCTAGTTATCAAACATACATGAGATGCCAAATGAGGCAACCTTCTCTTGAGATTCAATGGGGTCTTCAAGCTGTTTCAGTACCATCAGGAGGTCTTGGTTTGAGTCTCCATGCTTCCAGTGTCCATGATTCGAGAGTAATCTTTTCTCAAAACCCATCTGAAGTGCTGGAAACAAAGCCATTCAGTAGCAGCAAGGATCATGAACAAGATCATAGTAAGCTCCCCTGCTGTGAAGAATGCACTTCAAATTATGAGAAAGAAGCTCAGTTGCTCAAATCTGGCCAGCAAAAATTGCCTGCCTGGCTTCAACCACATGGCACCCAAGCCTGTCAAAAGGATGAAGTGGTTGAATTGAGGAGAAAGTGGAACAGGTTATGCTACAGTCTGCACCAAGGAAGGCATAATCAGAATCATTCAAGCCCCGCTTTGTACAGCCATCAAAACTCAATTGGGAAGAACCACTCTTATAGTACTTCATCGTACCCTTGGTTGTCAACCAGGAATGGCATCTTCCCAGATCTGAATTCGATCTCTTTTGCTGATCATCCAGCTTCAGACCCTGCAACCCATGGCTCTAATCTGGTGCCTCGGTTCAGGAGACAACAATCATGTAGTACAATCGAATTCAATTTCGATAATGGGGTTCAAAAGCATGAATTAGTGGAACCAACCTTGGATTCTTTGAAACTCAGTGAAGATAAGGAAGTGAAGATCACACTTGCTCTCGGCAACTCTGTGTTTTCTGATTCAGGAAAATCGACGGTGCAGAGAGCTGACATGTGTAAGCTTTTGAAAGAGAATGTGCCTTGGCAATCTGAATCCATTCCCTCAATAGTAGAAGCCATAATCGGTTCCAAACCATGTTCGGAAACTTGGTTTCTGATTGATGGGAATGACTCGATTGGAAAGAGAAGGTTGGCTCAAGCAATAGCAGAGTTGGTTCTGGGATCTGCTAATTCACTCCTACATATCAACATGAACAAAAGAGAAGATGAGATGTACCCAAGAGTGGAAAAACTAAAAAAAGCCTTGAAATCCAGTGACAAACTTGTTGTGTTGGTAGAAGATGTTGATTTGGCTGATACCCAGTTCTTAAAATTCCTAGCTGATAGAAAATGTGGAGAAGTGAGTAGAAGAGATGGGAATCATGGCCAAGCAATATTCATTTTGACCAAGGGTGAGTCCACAAGAAATGAGTACCCAGGTTCTATAATCCAAATGAAGTTGAAAGTTGATGAAAAAAGTACTAGTCCTAGTTTTGGGATCGCCAGCTTCGAACACAAGCGAAAAGCTGAGTGGGAGCTTGAAAACAAGACCAAATCTACAAGATTTGAAGAAAAGGAGGATTCAAGTGTGGTTGTTGCCTTTGAGAATGTGAATAGCAAGAAGGACTTCTCAAGGCAATCAAGCTTCAACAGTAACCTTGATCTAAACCTCAAAGCCGGTGAGGACAATGAAATCGAAGACAATGCAGGGGAGGTTAGCCCTATTTCAAGTGATTTGACCCGCGACTCTGCCACGGATGTCCAAACCCCACTTGGGTTCCTCGAATCAGTCGAGAACCTCTTCGTTTTCAATCGAAGCCCAGCTAGAGATCGGGAGGCCACCGAGCTTTTCTTGTCCAAGATTGAGGGGTGCTTTGAGGGTGTATATGGGAAACAAAATGGGGTTAGTTTTAGTGTGGATAAGAGGGTGTTAGAAGAGATATCTGTTGGGTCTGGTTCTTTTCCCAATAGCTTGTTTGAGAAATGGCTAAAAGGTATTTTTCAAACAAGCCTAAAATCGGTTAAATTTGGCGGGAAGGAGGGTATACTAGTAAGGCTATGTTTGGGGGGTACAGAAGAAGGCATTTTGGAGGGTTTCTTGGGCTCTTGTCTTCCCAAGAAAATCCAAATTTCTTGA

Protein Analysis

1062

Amino Acids

117.17

Weight (kDa)

7.22

Isoelectric Point (pI)

48.31

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NBD_SMAX1 PF23569 275 - 468 1.2e-81 SMAX1 nucleotide binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0011356)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G29920 AT4G29920
fragaria_vesca FvH4_4g07050 FvH4_4g07050
malus_domestica MD00G1086800.v1.1 MD16G1247100.v1.1
prunus_persica Prupe.1G073700_v2.0.a1
pyrus_communis pycom13g21290 pycom16g20740
rosa_chinensis RchiOBHm_Chr4g0399171
rosa_laevigata RLG00000009293
rosa_multiflora Rmu_sc0002062.1_g000001 Rmu_sc0006088.1_g000002
rosa_roxburghii Rroxscaffold_5G00344130
rosa_rugosa Rorug04G0014600
rosa_samantha Rh4AG092500 Rh4BG090500 Rh4CG101000 Rh4DG084900
rosa_wichuraiana Rw4G007620

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 606
AccB1I GGYRCC 3 cut(s) 296, 1601, 1867
AccI GTMKAC 1 cut(s) 3094
AccII CGCG 1 cut(s) 2793
AclWI GGATC 5 cut(s) 967, 1092, 1488, 2239, 2555
AcoI YGGCCR 3 cut(s) 120, 1564, 2434
AcsI RAATTY 8 cut(s) 691, 1001, 1209, 1807, 1907, 2381, 3074, 3177
AcuI CTGAAG 4 cut(s) 80, 939, 1464, 1821
AcvI CACGTG 1 cut(s) 118
AcyI GRCGYC 1 cut(s) 297
AflIII ACRYGT 3 cut(s) 115, 1015, 2061
AhdI GACNNNNNGTC 1 cut(s) 907
AhlI ACTAGT 2 cut(s) 2531, 3097
AjnI CCWGG 5 cut(s) 80, 231, 1583, 1781, 2485
AjuI GAANNNNNNNTTGG 2 cut(s) 1945, 1977
AloI GAACNNNNNNTCC 4 cut(s) 512, 544, 951, 983
Alw21I GWGCWC 2 cut(s) 240, 1071
Alw26I GTCTC 6 cut(s) 155, 820, 1119, 1174, 1394, 1876
AlwI GGATC 5 cut(s) 967, 1092, 1488, 2239, 2555
AlwNI CAGNNNCTG 2 cut(s) 812, 1844
AoxI GGCC 9 cut(s) 91, 120, 162, 228, 387, 922, 1564, 2434, 2886
ApaI GGGCCC 2 cut(s) 232, 391
ApoI RAATTY 8 cut(s) 691, 1001, 1209, 1807, 1907, 2381, 3074, 3177
Asp700I GAANNNNTTC 3 cut(s) 2106, 2675, 2849
AspLEI GCGC 3 cut(s) 6, 256, 299
AspS9I GGNCC 5 cut(s) 162, 228, 229, 387, 388
AsuC2I CCSGG 1 cut(s) 526
AsuHPI GGTGA 7 cut(s) 200, 633, 871, 911, 1157, 2474, 2741
AsuII TTCGAA 1 cut(s) 2559
AxyI CCTNAGG 2 cut(s) 283, 972
BaeGI GKGCMC 2 cut(s) 232, 391
BalI TGGCCA 2 cut(s) 1566, 2436
BanI GGYRCC 3 cut(s) 296, 1601, 1867
BanII GRGCYC 5 cut(s) 232, 240, 391, 1071, 3155
BbrPI CACGTG 1 cut(s) 118
BbsI GAAGAC 3 cut(s) 1340, 2754, 3152
Bbv12I GWGCWC 2 cut(s) 240, 1071
BccI CCATC 8 cut(s) 491, 675, 691, 1375, 1447, 1728, 2165, 2417
BcgI CGANNNNNNTGC 2 cut(s) 2735, 2769
BciT130I CCWGG 5 cut(s) 82, 233, 1585, 1783, 2487
BclI TGATCA 2 cut(s) 474, 1825
BcnI CCSGG 1 cut(s) 526
BcoDI GTCTC 6 cut(s) 155, 820, 1119, 1174, 1394, 1876
BcuI ACTAGT 2 cut(s) 2531, 3097
BfaI CTAG 6 cut(s) 1287, 2387, 2532, 2538, 2874, 3098
BfmI CTRYAG 2 cut(s) 804, 1663
BfoI RGCGCY 2 cut(s) 257, 300
BglI GCCNNNNNGGC 1 cut(s) 1585
BglII AGATCT 1 cut(s) 1801
BlpI GCTNAGC 1 cut(s) 76
BmcAI AGTACT 4 cut(s) 538, 799, 1756, 2530
Bme1390I CCNGG 6 cut(s) 82, 233, 526, 1585, 1783, 2487
BmeRI GACNNNNNGTC 1 cut(s) 907
BmgT120I GGNCC 5 cut(s) 162, 228, 229, 387, 388
BmrFI CCNGG 6 cut(s) 82, 233, 526, 1585, 1783, 2487
BmrI ACTGGG 2 cut(s) 1181, 2365
BmsI GCATC 2 cut(s) 1298, 1800
BmuI ACTGGG 2 cut(s) 1181, 2365
BpiI GAAGAC 3 cut(s) 1340, 2754, 3152
BplI GAGNNNNNCTC 4 cut(s) 551, 583, 800, 832
BpmI CTGGAG 2 cut(s) 254, 1113
Bpu10I CCTNAGC 2 cut(s) 7, 99
Bpu1102I GCTNAGC 1 cut(s) 76
Bpu14I TTCGAA 1 cut(s) 2559
BpuEI CTTGAG 8 cut(s) 124, 175, 485, 517, 1234, 1352, 2190, 2665
BpuMI CCSGG 1 cut(s) 526
BsaAI YACGTR 1 cut(s) 118
BsaBI GATNNNNATC 1 cut(s) 2427
BsaHI GRCGYC 1 cut(s) 297
BsaXI ACNNNNNCTCC 4 cut(s) 262, 292, 1152, 1182
Bse118I RCCGGY 1 cut(s) 2726
Bse1I ACTGG 8 cut(s) 147, 303, 598, 619, 1187, 1401, 2322, 2371
Bse21I CCTNAGG 2 cut(s) 283, 972
Bse3DI GCAATG 1 cut(s) 369
Bse8I GATNNNNATC 1 cut(s) 2427
BseBI CCWGG 5 cut(s) 82, 233, 1585, 1783, 2487
BseGI GGATG 4 cut(s) 496, 1627, 1828, 2812
BseJI GATNNNNATC 1 cut(s) 2427
BseMI GCAATG 1 cut(s) 369
BseNI ACTGG 8 cut(s) 147, 303, 598, 619, 1187, 1401, 2322, 2371
BseRI GAGGAG 6 cut(s) 99, 100, 122, 559, 1110, 1654
BseSI GKGCMC 2 cut(s) 232, 391
BseYI CCCAGC 1 cut(s) 2869
BsgI GTGCAG 3 cut(s) 44, 1655, 2069
Bsh1236I CGCG 1 cut(s) 2793
BshFI GGCC 9 cut(s) 93, 122, 164, 230, 389, 924, 1566, 2436, 2888
BshNI GGYRCC 3 cut(s) 296, 1601, 1867
BsiHKAI GWGCWC 2 cut(s) 240, 1071
BsiSI CCGG 2 cut(s) 525, 2727
BsmAI GTCTC 6 cut(s) 155, 820, 1119, 1174, 1394, 1876
BsmI GAATGC 1 cut(s) 1526
BsnI GGCC 9 cut(s) 93, 122, 164, 230, 389, 924, 1566, 2436, 2888
Bsp119I TTCGAA 1 cut(s) 2559
Bsp120I GGGCCC 2 cut(s) 228, 387
Bsp1286I GDGCHC 5 cut(s) 232, 240, 391, 1071, 3155
Bsp1407I TGTACA 1 cut(s) 1713
Bsp1720I GCTNAGC 1 cut(s) 76
Bsp19I CCATGG 1 cut(s) 1852
BspANI GGCC 9 cut(s) 93, 122, 164, 230, 389, 924, 1566, 2436, 2888
BspFNI CGCG 1 cut(s) 2793
BspHI TCATGA 2 cut(s) 1032, 1483
BspPI GGATC 5 cut(s) 967, 1092, 1488, 2239, 2555
BspT104I TTCGAA 1 cut(s) 2559
BspT107I GGYRCC 3 cut(s) 296, 1601, 1867
BsrDI GCAATG 1 cut(s) 369
BsrFI RCCGGY 1 cut(s) 2726
BsrGI TGTACA 1 cut(s) 1713
BsrI ACTGG 8 cut(s) 147, 303, 598, 619, 1187, 1401, 2322, 2371
BssAI RCCGGY 1 cut(s) 2726
BssNAI GTATAC 1 cut(s) 3095
BssNI GRCGYC 1 cut(s) 297
BssT1I CCWWGG 7 cut(s) 825, 1675, 1769, 1852, 1956, 2090, 2457
Bst1107I GTATAC 1 cut(s) 3095
Bst2UI CCWGG 5 cut(s) 82, 233, 1585, 1783, 2487
Bst4CI ACNGT 5 cut(s) 326, 889, 1667, 2047, 2702
Bst6I CTCTTC 4 cut(s) 634, 2413, 2855, 2979
BstACI GRCGYC 1 cut(s) 297
BstAPI GCANNNNNTGC 1 cut(s) 1576
BstAUI TGTACA 1 cut(s) 1713
BstBAI YACGTR 1 cut(s) 118
BstBI TTCGAA 1 cut(s) 2559
BstC8I GCNNGC 5 cut(s) 162, 166, 1568, 1581, 2554
BstDSI CCRYGG 3 cut(s) 322, 1852, 2802
BstENI CCTNNNNNAGG 1 cut(s) 282
BstF5I GGATG 4 cut(s) 496, 1627, 1828, 2812
BstFNI CGCG 1 cut(s) 2793
BstH2I RGCGCY 2 cut(s) 257, 300
BstHHI GCGC 3 cut(s) 6, 256, 299
BstMAI GTCTC 6 cut(s) 155, 820, 1119, 1174, 1394, 1876
BstNI CCWGG 5 cut(s) 82, 233, 1585, 1783, 2487
BstNSI RCATGY 2 cut(s) 1019, 2065
BstSCI CCNGG 6 cut(s) 80, 231, 524, 1583, 1781, 2485
BstSFI CTRYAG 2 cut(s) 804, 1663
BstSLI GKGCMC 2 cut(s) 232, 391
BstUI CGCG 1 cut(s) 2793
BstV2I GAAGAC 3 cut(s) 1340, 2754, 3152
BstX2I RGATCY 2 cut(s) 1801, 2231
BstXI CCANNNNNNTGG 1 cut(s) 1269
BstYI RGATCY 2 cut(s) 1801, 2231
BstZ17I GTATAC 1 cut(s) 3095
Bsu36I CCTNAGG 2 cut(s) 283, 972
BsuRI GGCC 9 cut(s) 93, 122, 164, 230, 389, 924, 1566, 2436, 2888
BtgI CCRYGG 3 cut(s) 322, 1852, 2802
BtsCI GGATG 4 cut(s) 496, 1627, 1828, 2812
BtsIMutI CAGTG 6 cut(s) 605, 612, 885, 1408, 1981, 2329
Cac8I GCNNGC 5 cut(s) 162, 166, 1568, 1581, 2554
CaiI CAGNNNCTG 2 cut(s) 812, 1844
CciI TCATGA 2 cut(s) 1032, 1483
CfoI GCGC 3 cut(s) 6, 256, 299
Cfr10I RCCGGY 1 cut(s) 2726
Cfr13I GGNCC 5 cut(s) 162, 228, 229, 387, 388
DinI GGCGCC 1 cut(s) 298
DriI GACNNNNNGTC 1 cut(s) 907
EaeI YGGCCR 3 cut(s) 120, 1564, 2434
Eam1104I CTCTTC 4 cut(s) 634, 2413, 2855, 2979
Eam1105I GACNNNNNGTC 1 cut(s) 907
EarI CTCTTC 4 cut(s) 634, 2413, 2855, 2979
Ecl136II GAGCTC 2 cut(s) 238, 1069
Eco130I CCWWGG 7 cut(s) 825, 1675, 1769, 1852, 1956, 2090, 2457
Eco147I AGGCCT 1 cut(s) 924
Eco24I GRGCYC 5 cut(s) 232, 240, 391, 1071, 3155
Eco32I GATATC 1 cut(s) 2991
Eco53kI GAGCTC 2 cut(s) 238, 1069
Eco57I CTGAAG 4 cut(s) 80, 939, 1464, 1821
Eco72I CACGTG 1 cut(s) 118
Eco81I CCTNAGG 2 cut(s) 283, 972
EcoICRI GAGCTC 2 cut(s) 238, 1069
EcoNI CCTNNNNNAGG 1 cut(s) 282
EcoO109I RGGNCCY 3 cut(s) 228, 229, 387
EcoRI GAATTC 2 cut(s) 1807, 1907
EcoRII CCWGG 5 cut(s) 80, 231, 1583, 1781, 2485
EcoRV GATATC 1 cut(s) 2991
EcoT14I CCWWGG 7 cut(s) 825, 1675, 1769, 1852, 1956, 2090, 2457
EcoT38I GRGCYC 5 cut(s) 232, 240, 391, 1071, 3155
EgeI GGCGCC 1 cut(s) 298
EheI GGCGCC 1 cut(s) 298
ErhI CCWWGG 7 cut(s) 825, 1675, 1769, 1852, 1956, 2090, 2457
FalI AAGNNNNNCTT 6 cut(s) 539, 571, 1693, 1725, 2660, 2692
FauI CCCGC 5 cut(s) 153, 207, 1714, 2798, 3074
FbaI TGATCA 2 cut(s) 474, 1825
FblI GTMKAC 1 cut(s) 3094
FokI GGATG 4 cut(s) 503, 1634, 1815, 2819
FriOI GRGCYC 5 cut(s) 232, 240, 391, 1071, 3155
FspBI CTAG 6 cut(s) 1287, 2387, 2532, 2538, 2874, 3098
GlaI GCGC 3 cut(s) 5, 255, 298
GsaI CCCAGC 1 cut(s) 2873
GsuI CTGGAG 2 cut(s) 254, 1113
HaeII RGCGCY 2 cut(s) 257, 300
HaeIII GGCC 9 cut(s) 93, 122, 164, 230, 389, 924, 1566, 2436, 2888
HapII CCGG 2 cut(s) 525, 2727
HhaI GCGC 3 cut(s) 6, 256, 299
Hin1I GRCGYC 1 cut(s) 297
Hin6I GCGC 3 cut(s) 4, 254, 297
HinP1I GCGC 3 cut(s) 4, 254, 297
HincII GTYRAC 2 cut(s) 319, 1779
HindII GTYRAC 2 cut(s) 319, 1779
HindIII AAGCTT 2 cut(s) 2069, 2692
HpaII CCGG 2 cut(s) 525, 2727
HphI GGTGA 7 cut(s) 200, 633, 871, 911, 1157, 2474, 2741
Hpy166II GTNNAC 5 cut(s) 319, 641, 1779, 2469, 3095
Hpy8I GTNNAC 5 cut(s) 319, 641, 1779, 2469, 3095
Hpy99I CGWCG 1 cut(s) 2047
HpyCH4III ACNGT 5 cut(s) 326, 889, 1667, 2047, 2702
HpyCH4IV ACGT 1 cut(s) 117
HpyCH4V TGCA 9 cut(s) 25, 225, 374, 414, 1524, 1672, 1847, 2050, 2756
HpySE526I ACGT 1 cut(s) 117
Hsp92I GRCGYC 1 cut(s) 297
HspAI GCGC 3 cut(s) 4, 254, 297
KasI GGCGCC 1 cut(s) 296
Ksp22I TGATCA 2 cut(s) 474, 1825
LmnI GCTCC 6 cut(s) 235, 270, 655, 794, 1509, 2584
LweI GCATC 2 cut(s) 1298, 1800
MaeI CTAG 6 cut(s) 1287, 2387, 2532, 2538, 2874, 3098
MaeII ACGT 1 cut(s) 117
MaeIII GTNAC 4 cut(s) 103, 899, 2324, 2702
MfeI CAATTG 2 cut(s) 1140, 1731
MflI RGATCY 2 cut(s) 1801, 2231
MhlI GDGCHC 5 cut(s) 232, 240, 391, 1071, 3155
MlsI TGGCCA 2 cut(s) 1566, 2436
MluNI TGGCCA 2 cut(s) 1566, 2436
Mly113I GGCGCC 1 cut(s) 297
MlyI GAGTC 6 cut(s) 818, 896, 1396, 2174, 2474, 2789
Mox20I TGGCCA 2 cut(s) 1566, 2436
MroXI GAANNNNTTC 3 cut(s) 2106, 2675, 2849
MscI TGGCCA 2 cut(s) 1566, 2436
MseI TTAA 5 cut(s) 258, 662, 837, 2378, 3072
Msp20I TGGCCA 2 cut(s) 1566, 2436
MspA1I CMGCKG 2 cut(s) 41, 472
MspI CCGG 2 cut(s) 525, 2727
MspR9I CCNGG 6 cut(s) 82, 233, 526, 1585, 1783, 2487
MunI CAATTG 2 cut(s) 1140, 1731
Mva1269I GAATGC 1 cut(s) 1526
MvaI CCWGG 5 cut(s) 82, 233, 1585, 1783, 2487
MvnI CGCG 1 cut(s) 2793
NarI GGCGCC 1 cut(s) 297
NciI CCSGG 1 cut(s) 526
NcoI CCATGG 1 cut(s) 1852
NmeAIII GCCGAG 1 cut(s) 1989
NmuCI GTSAC 3 cut(s) 103, 899, 2324
NspI RCATGY 2 cut(s) 1019, 2065
NspV TTCGAA 1 cut(s) 2559
PagI TCATGA 2 cut(s) 1032, 1483
PceI AGGCCT 1 cut(s) 924
PciI ACATGT 2 cut(s) 1015, 2061
PcsI WCGNNNNNNNCGW 2 cut(s) 2556, 2838
PctI GAATGC 1 cut(s) 1526
PdmI GAANNNNTTC 3 cut(s) 2106, 2675, 2849
PleI GAGTC 6 cut(s) 817, 896, 1395, 2174, 2473, 2789
PluTI GGCGCC 1 cut(s) 300
PmaCI CACGTG 1 cut(s) 118
PmlI CACGTG 1 cut(s) 118
PpsI GAGTC 6 cut(s) 817, 896, 1395, 2174, 2473, 2789
Ppu21I YACGTR 1 cut(s) 118
PscI ACATGT 2 cut(s) 1015, 2061
PsiI TTATAA 1 cut(s) 606
Psp124BI GAGCTC 2 cut(s) 240, 1071
Psp6I CCWGG 5 cut(s) 80, 231, 1583, 1781, 2485
PspCI CACGTG 1 cut(s) 118
PspFI CCCAGC 1 cut(s) 2869
PspGI CCWGG 5 cut(s) 80, 231, 1583, 1781, 2485
PspOMI GGGCCC 2 cut(s) 228, 387
PspPI GGNCC 5 cut(s) 162, 228, 229, 387, 388
PstNI CAGNNNCTG 2 cut(s) 812, 1844
PsuI RGATCY 2 cut(s) 1801, 2231
PvuII CAGCTG 1 cut(s) 472
SacI GAGCTC 2 cut(s) 240, 1071
SaqAI TTAA 5 cut(s) 258, 662, 837, 2378, 3072
Sau96I GGNCC 5 cut(s) 162, 228, 229, 387, 388
ScaI AGTACT 4 cut(s) 538, 799, 1756, 2530
SchI GAGTC 6 cut(s) 818, 896, 1396, 2174, 2474, 2789
ScrFI CCNGG 6 cut(s) 82, 233, 526, 1585, 1783, 2487
SduI GDGCHC 5 cut(s) 232, 240, 391, 1071, 3155
SfaNI GCATC 2 cut(s) 1298, 1800
SfcI CTRYAG 2 cut(s) 804, 1663
SfoI GGCGCC 1 cut(s) 298
SfuI TTCGAA 1 cut(s) 2559
SmlI CTYRAG 8 cut(s) 139, 154, 464, 532, 1249, 1331, 2205, 2680
SmoI CTYRAG 8 cut(s) 139, 154, 464, 532, 1249, 1331, 2205, 2680
SpeI ACTAGT 2 cut(s) 2531, 3097
SseBI AGGCCT 1 cut(s) 924
SspDI GGCGCC 1 cut(s) 296
SspI AATATT 1 cut(s) 2445
SspMI CTAG 6 cut(s) 1287, 2387, 2532, 2538, 2874, 3098
SstI GAGCTC 2 cut(s) 240, 1071
StuI AGGCCT 1 cut(s) 924
StyD4I CCNGG 6 cut(s) 80, 231, 524, 1583, 1781, 2485
StyI CCWWGG 7 cut(s) 825, 1675, 1769, 1852, 1956, 2090, 2457
TaaI ACNGT 5 cut(s) 326, 889, 1667, 2047, 2702
TaiI ACGT 1 cut(s) 120
TatI WGTACW 6 cut(s) 536, 797, 1713, 1754, 1898, 2528
TauI GCSGC 4 cut(s) 125, 182, 297, 302
Tru1I TTAA 5 cut(s) 258, 662, 837, 2378, 3072
Tru9I TTAA 5 cut(s) 258, 662, 837, 2378, 3072
TscAI CASTG 6 cut(s) 605, 619, 892, 1408, 1981, 2329
TseFI GTSAC 3 cut(s) 103, 899, 2324
Tsp45I GTSAC 3 cut(s) 103, 899, 2324
TspGWI ACGGA 1 cut(s) 2819
TspRI CASTG 6 cut(s) 605, 619, 892, 1408, 1981, 2329
XagI CCTNNNNNAGG 1 cut(s) 282
XapI RAATTY 8 cut(s) 691, 1001, 1209, 1807, 1907, 2381, 3074, 3177
XceI RCATGY 2 cut(s) 1019, 2065
XcmI CCANNNNNNNNNTGG 2 cut(s) 310, 2819
XmiI GTMKAC 1 cut(s) 3094
XmnI GAANNNNTTC 3 cut(s) 2106, 2675, 2849
XspI CTAG 6 cut(s) 1287, 2387, 2532, 2538, 2874, 3098
ZrmI AGTACT 4 cut(s) 538, 799, 1756, 2530
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.