Rorug04G0014600

Belongs to the glycosyl hydrolase 47 family

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000004
Physical Location & Seq
Forward (+)
2333918 .. 2339167
5250 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug04G0014600.1

Sequence Viewer

Length: 2349 bp
ATGCTTGATGAGGATATGTGGATGGATTCTCCAGTGTTTAACTACATAAATAGTCTTTCTCCTATCAAGCCAGTGAAATCTGTACACTTTACTCAGACGTTCAGCTCCCTTAGCTTTGCATCCCTTCCATCCGTTTTCACTTCACCTCATGTCAGTTCTCACAAGGAATCCAGATTCCTGAAGAGGCAAAATGCTTCTGATGATCTGTCAAAACCTGAATTTTCTCCGGAAAGTGGAAATAAAGTCTGTGCAAGTGAAGATGCTGCTCAAGTTTATAACAACTCTTCAGAGATACAAGAAGATTGTGTTCCAGCAGTTCCCATTGGAGAAACTTCTGTAGAGCCACCCAGTGAACACTCAAAGTTTGTGATTGAGCTACCCCGGAATTTGAATTATGACTGTGGCAGTCCTAACTGCAACACATCTCGTTGCGGTATCAAGGAAGATTGTGACTCGGAATTGGCTGAGTTTTCGGCTTCAGTTGCTCAATATGTTCAAGAAACTTCTGACAAATGTTCATCAGATGATGAAGCACAGCAGCAGTTGATATGCCAGAGTGAGCAAAGAAAAGAAGGGACAGGCTGTGATTGGGATAGTTTGATTTCTGATGCGGCTGACATATTGATTTTTGATTCCCCCAATAGCACAGACGCTTTTAAGGAGCTAATGAATCATTCCCTAGACCCCATGACAAGGTTTTCTACTTCAATTGTGCAGCACCTCTCGCAAAATAACATTGGTGATGAGCAACTAGTGCAGGTCATTGATACAGTTGGTTCTGGTCAACAACTTCAAATTGAAGATCATTCCTCTCAGAATGGAGCAGCCAGTGAGCTGAATGAAACAGAACACATGCCGAACCATTTAAACGAGTATATGGTGGACAATCCAAATGTTAAAGAAGATAATAAAGCGGAAACATCCATGCAGCTCACTTGTAAGCCTGTTATAAACTTGCATCGTGGCTTGCGAAGGCGCTGTCTAGATTTTGAAATGACGGGAGCTCGCAGGAAGAGTTTCGAAAATGTTTCAAACTTTAGTTCTTCTATGTTATCTCAATCTAATGAGAATGTCACCACAAATGATAAGCCAGCATCTATGAAACCTGGTGGTGAATCCTCTAGGTGCATCTTACCTGGAATCGGTTTGCACTTGAATGCTCTTGCAACAACCTCCAAAGACTACAAAATCATCAAGAATGAAAATTTGGCTTCTGGTAGAGAACTGAGTTTTCCCAACTCCAATGCCTCCATCCATTCCCCCACAGCTGCTCAAGGGAGTGTTTATGAGTCTTTCCCTTCAGCTTCTTCTGAAAGAGACATGGATGGCACTGAAAATGGGGTTCAGCTGTTGCAAGATGCTTCCCAAACATCCGCTCTTTTAGCAAATGAAGACTTCAACCAGAATAGCCCCAAAAAGAAGAGACGCAGGGCAGAACACACTGGAGAAGGTGAGGCTTGCAAACGTTGCAACTGTAAAAAATCAAAATGTTTGAAACTTTACTGCGAGTGCTTTGCTGCCGGTGTCTACTGTATAGAGCCTTGTTCATGTCAAGATTGCTTCAACAAACCTATTCATGAAGATACTGTGCTTGCAACTCGTAAACAGATTGAGTCTCGCAACCCACTTGCGTTTGCTCCCAAAGTGATTAGGAACTCTGATTCTGCTGCTCCTGAATATGGGGACGAATCCAGCAAGACCCCAGCTTCTGCACGGCATAAAAGAGGATGCAATTGCAAGAAATCAAATTGCCTAAAAAAATACTGCGAATGCTATCAGGGTGGTGTTGGATGCTCCATTGGCTGCAGATGTGAAGGGTGCAAAAATGCATTTGGTACAAAGGAAGGATCTATTATTGGAACTGAAACTGAGCTAGACGAAGAAGAAACAGAAGCAGCCGAAAAGAGTGTGGCTGACGGAGATCAACAGAAAAATGAAATTCAGAAAAATGAAGAGCAAACCTCTGCCCTTCCCACAACACCATTACGGCTGTCCAGACAATTAGTTCCAGTGTCATTTTCATCAAAGAACAAACCGCCACGATCTTCTGTTTTTAGCATTGGGGGGTCCTCTTCTGGATTGTATGCAAGCCAGAAGCTTGGAAAACCAAATATTCTGCGACCCCAATCCAAGTTTGATCAGAGGCATAGCCAAACTGTTCCAGAGGATGAAATGCCAGAGATTCTTCAAGGAGATAGCTCTCCTACTACCGGAGTCAAGACTGCTTCTCCCAACAGTAAGAGGGTCTCTCCTCCATGTACCTTTGGGTCATCACCTGGTCGAAGGAGTGGCAGGAAACTTATTTTGCAATCCATCCCTTCATTTCCTTCTCTCACTCCCCAGCATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

782

Amino Acids

85.64

Weight (kDa)

5.47

Isoelectric Point (pI)

63.94

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TCR PF03638 488 - 523 1.4e-11 Tesmin/TSO1-like CXC domain, cysteine-rich domain
TCR PF03638 574 - 610 1.9e-11 Tesmin/TSO1-like CXC domain, cysteine-rich domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000044)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G07760 AT5G28823
fragaria_vesca FvH4_1g13572 FvH4_2g03281 FvH4_2g04691 FvH4_2g08332 FvH4_2g08333 FvH4_2g15313 FvH4_2g26101 FvH4_2g29541 FvH4_3g06911 FvH4_3g34351 FvH4_3g43733 FvH4_4g02432 FvH4_4g05601 FvH4_4g08213 FvH4_4g09961 FvH4_4g10131 FvH4_4g20001 FvH4_4g20002 FvH4_5g01051 FvH4_5g01401 FvH4_5g27943 FvH4_6g09220 FvH4_6g17383 FvH4_6g35491 FvH4_6g46421 FvH4_7g04151 FvH4_7g13962 FvH4_7g18611 FvH4_7g19491 FvH4_7g19511 FvH4_7g26562
malus_domestica MD06G1221600.v1.1
pyrus_communis pycom10g21150
rosa_chinensis RchiOBHm_Chr1g0337571 RchiOBHm_Chr2g0168771 RchiOBHm_Chr3g0453631 RchiOBHm_Chr6g0278581
rosa_laevigata RLG00000001899 RLG00000001925 RLG00000002026 RLG00000003410 RLG00000003767 RLG00000004304 RLG00000004473 RLG00000004677 RLG00000006856 RLG00000007994 RLG00000009888 RLG00000011627 RLG00000012174 RLG00000012217 RLG00000013118 RLG00000013736 RLG00000014194 RLG00000014251 RLG00000015011 RLG00000015057 RLG00000015235 RLG00000017416 RLG00000018052 RLG00000018537 RLG00000019968 RLG00000020096 RLG00000020263 RLG00000022606 RLG00000023119 RLG00000028111 RLG00000029686 RLG00000030126 RLG00000031124 RLG00000031236 RLG00000032766 RLG00000033171 RLG00000033548 RLG00000033987 RLG00000034062 RLG00000035115 RLG00000035863
rosa_multiflora Rmu_co8036712.1_g000001 Rmu_co8080248.1_g000001 Rmu_co8208334.1_g000001 Rmu_co8253451.1_g000001 Rmu_co8393241.1_g000001 Rmu_co8522225.1_g000005 Rmu_sc0000060.1_g000030 Rmu_sc0000060.1_g000031 Rmu_sc0000060.1_g000032 Rmu_sc0000090.1_g000008 Rmu_sc0000149.1_g000051 Rmu_sc0000149.1_g000058 Rmu_sc0000309.1_g000050 Rmu_sc0000370.1_g000022 Rmu_sc0000370.1_g000023 Rmu_sc0000370.1_g000024 Rmu_sc0000418.1_g000018 Rmu_sc0000427.1_g000014 Rmu_sc0000427.1_g000015 Rmu_sc0000434.1_g000008 Rmu_sc0000487.1_g000038 Rmu_sc0000487.1_g000039 Rmu_sc0000569.1_g000029 Rmu_sc0000580.1_g000097 Rmu_sc0000595.1_g000068 Rmu_sc0000607.1_g000027 Rmu_sc0000738.1_g000004 Rmu_sc0000758.1_g000001 Rmu_sc0000758.1_g000002 Rmu_sc0000870.1_g000019 Rmu_sc0000924.1_g000040 Rmu_sc0000924.1_g000041 Rmu_sc0000999.1_g000037 Rmu_sc0001001.1_g000001 Rmu_sc0001010.1_g000080 Rmu_sc0001075.1_g000041 Rmu_sc0001097.1_g000016 Rmu_sc0001173.1_g000020 Rmu_sc0001258.1_g000010 Rmu_sc0001425.1_g000031 Rmu_sc0001493.1_g000020 Rmu_sc0001493.1_g000021 Rmu_sc0001644.1_g000024 Rmu_sc0001648.1_g000039 Rmu_sc0001662.1_g000002 Rmu_sc0001849.1_g000046 Rmu_sc0001851.1_g000038 Rmu_sc0001861.1_g000006 Rmu_sc0001899.1_g000008 Rmu_sc0002231.1_g000023 Rmu_sc0002393.1_g000012 Rmu_sc0002515.1_g000010 Rmu_sc0002551.1_g000013 Rmu_sc0002680.1_g000029 Rmu_sc0002700.1_g000030 Rmu_sc0002700.1_g000031 Rmu_sc0002709.1_g000035 Rmu_sc0002779.1_g000017 Rmu_sc0003267.1_g000040 Rmu_sc0003306.1_g000009 Rmu_sc0003338.1_g000014 Rmu_sc0003522.1_g000038 Rmu_sc0003522.1_g000039 Rmu_sc0003653.1_g000031 Rmu_sc0003901.1_g000003 Rmu_sc0003920.1_g000009 Rmu_sc0004014.1_g000009 Rmu_sc0004016.1_g000013 Rmu_sc0004031.1_g000002 Rmu_sc0004106.1_g000001 Rmu_sc0004432.1_g000004 Rmu_sc0004481.1_g000020 Rmu_sc0004874.1_g000005 Rmu_sc0004928.1_g000005 Rmu_sc0005065.1_g000053 Rmu_sc0005091.1_g000005 Rmu_sc0005217.1_g000015 Rmu_sc0005242.1_g000002 Rmu_sc0005300.1_g000011 Rmu_sc0005400.1_g000004 Rmu_sc0005486.1_g000007 Rmu_sc0005527.1_g000015 Rmu_sc0006059.1_g000021 Rmu_sc0006087.1_g000004 Rmu_sc0006184.1_g000006 Rmu_sc0006184.1_g000007 Rmu_sc0006578.1_g000006 Rmu_sc0006730.1_g000010 Rmu_sc0006736.1_g000030 Rmu_sc0006736.1_g000033 Rmu_sc0007333.1_g000018 Rmu_sc0007856.1_g000010 Rmu_sc0008231.1_g000003 Rmu_sc0009862.1_g000012 Rmu_sc0010547.1_g000001 Rmu_sc0010547.1_g000003 Rmu_sc0010632.1_g000012 Rmu_sc0010747.1_g000008 Rmu_sc0011075.1_g000009 Rmu_sc0011565.1_g000004 Rmu_sc0011641.1_g000003 Rmu_sc0013102.1_g000013 Rmu_sc0013160.1_g000006 Rmu_sc0014846.1_g000004 Rmu_sc0017037.1_g000003 Rmu_sc0018203.1_g000001 Rmu_sc0018204.1_g000001 Rmu_sc0018348.1_g000001 Rmu_sc0019354.1_g000002 Rmu_sc0021630.1_g000002 Rmu_sc0022987.1_g000002 Rmu_sc0024469.1_g000005 Rmu_sc0033519.1_g000001 Rmu_sc0033519.1_g000002 Rmu_sc0033519.1_g000003 Rmu_sc0042775.1_g000001 Rmu_ssc0000110.1_g000003 Rmu_ssc0000110.1_g000004 Rmu_ssc0000126.1_g000068 Rmu_ssc0000200.1_g000007 Rmu_ssc0000295.1_g000003 Rmu_ssc0000295.1_g000004 Rmu_ssc0000299.1_g000010 Rmu_ssc0000308.1_g000024 Rmu_ssc0000339.1_g000006 Rmu_ssc0000385.1_g000012 Rmu_ssc0000409.1_g000004 Rmu_ssc0000421.1_g000004
rosa_roxburghii Rroxscaffold_156G00440360 Rroxscaffold_166G00440800 Rroxscaffold_1G00039040 Rroxscaffold_1G00039050 Rroxscaffold_1G00073950 Rroxscaffold_2G00091710 Rroxscaffold_2G00120050 Rroxscaffold_2G00122590 Rroxscaffold_3G00219700 Rroxscaffold_3G00264140 Rroxscaffold_4G00290600 Rroxscaffold_4G00323610 Rroxscaffold_4G00328460 Rroxscaffold_5G00343440 Rroxscaffold_5G00343570 Rroxscaffold_5G00378540 Rroxscaffold_5G00385090 Rroxscaffold_7G00169130 Rroxscaffold_7G00216420
rosa_rugosa Rorug01G0065800 Rorug01G0073500 Rorug01G0091700 Rorug01G0096500 Rorug01G0204700.1 Rorug01G0249100 Rorug01G0333800 Rorug01G0333900 Rorug01G0339500 Rorug01G0431300 Rorug02G0085400 Rorug02G0117500 Rorug02G0130900 Rorug02G0178800 Rorug02G0226700 Rorug02G0336300 Rorug02G0338700 Rorug02G0351400 Rorug02G0459900 Rorug03G0187000 Rorug03G0223700 Rorug03G0291300 Rorug03G0291300 Rorug03G0311100 Rorug03G0316900 Rorug03G0346000 Rorug04G0014500 Rorug04G0014600 Rorug04G0124100 Rorug04G0136500 Rorug04G0302000 Rorug04G0338100 Rorug04G0338200 Rorug04G0413100 Rorug05G0182200 Rorug05G0226500 Rorug05G0273300 Rorug05G0292200 Rorug05G0292200 Rorug05G0392500 Rorug05G0394500 Rorug05G0394600 Rorug05G0505600.1 Rorug06G0351400 Rorug06G0393400 Rorug06G0393600 Rorug06G0470000 Rorug07G0063100 Rorug07G0086800 Rorug07G0109200 Rorug07G0236100
rosa_samantha Rh1AG010800 Rh1AG011100 Rh1AG064900 Rh1AG088000 Rh1AG207100 Rh1AG262000 Rh1AG300800 Rh1BG043000 Rh1BG144600 Rh1BG180700 Rh1BG180800 Rh1BG328800 Rh1BG399400 Rh1CG041400 Rh1CG047300 Rh1CG379700 Rh1DG036500 Rh1DG083000 Rh1DG210700 Rh1DG210800 Rh1DG231100 Rh2AG007900 Rh2AG055500 Rh2AG339100 Rh2AG368100 Rh2BG243300 Rh2BG258900 Rh2BG292000 Rh2BG333500 Rh2BG387300 Rh2BG612800 Rh2BG619100 Rh2CG026500 Rh2CG163600 Rh2CG535700 Rh2DG186400 Rh2DG235000 Rh2DG314500 Rh2DG388500 Rh2DG391400 Rh2DG496900 Rh2DG526700 Rh2DG570700 Rh3AG330700 Rh3BG266900 Rh3CG236000 Rh3CG340400 Rh3DG090000 Rh3DG278400 Rh3DG297600 Rh3DG362600 Rh4AG001300 Rh4AG023300 Rh4AG097100 Rh4AG427000 Rh4BG029400 Rh4BG032400 Rh4BG086000 Rh4BG249200 Rh4CG001900 Rh4CG040600 Rh4CG093000 Rh4CG106300 Rh4CG113200 Rh4CG113900 Rh4DG002300 Rh4DG144400 Rh4DG234200 Rh5AG043700 Rh5AG084900 Rh5AG161500 Rh5AG409000 Rh5AG457200 Rh5AG457900 Rh5AG473700 Rh5AG520600 Rh5BG042100 Rh5BG124100 Rh5BG323500 Rh5BG417200 Rh5BG443700 Rh5BG451500 Rh5BG464900 Rh5BG470400 Rh5BG522500 Rh5CG068800 Rh5CG178300 Rh5CG231000 Rh5CG258600 Rh5CG394500 Rh5CG473700 Rh5DG164700 Rh5DG235400 Rh5DG261300 Rh5DG304900 Rh5DG334500 Rh5DG424300 Rh5DG458400 Rh5DG478600 Rh5DG552300 Rh5DG552700 Rh6AG037000 Rh6AG042100 Rh6AG255500 Rh6AG283400 Rh6AG291800 Rh6BG049600 Rh6BG080700 Rh6BG114600 Rh6BG128900 Rh6BG352500 Rh6CG052400 Rh6CG112900 Rh6CG113000 Rh6CG131300 Rh6CG157700 Rh6CG243200 Rh6CG254100 Rh6CG275700 Rh6CG299700 Rh6CG309100 Rh6CG317600 Rh6CG342600 Rh6CG471900 Rh6DG038200 Rh6DG102300 Rh6DG114400 Rh6DG225900 Rh6DG292900 Rh6DG320700 Rh6DG512800 Rh7AG217700 Rh7AG313900 Rh7AG446000 Rh7AG472600 Rh7BG223100 Rh7BG349900 Rh7BG352000 Rh7CG160200 Rh7CG233900 Rh7CG242700 Rh7CG273900 Rh7CG306400 Rh7CG322200 Rh7DG053800 Rh7DG077800 Rh7DG227700 Rh7DG404800
rosa_wichuraiana Rw0G003990 Rw2G022110 Rw2G024890 Rw6G005700 Rw7G008770

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 276, 950
Acc36I ACCTGC 1 cut(s) 748
AccBSI CCGCTC 1 cut(s) 1376
AccI GTMKAC 1 cut(s) 1527
AccIII TCCGGA 1 cut(s) 226
AciI CCGC 5 cut(s) 432, 611, 914, 1374, 2036
AclI AACGTT 1 cut(s) 1465
AclWI GGATC 1 cut(s) 1855
AcsI RAATTY 4 cut(s) 218, 385, 1204, 1938
AcuI CTGAAG 4 cut(s) 200, 270, 462, 1284
AdeI CACNNNGTG 1 cut(s) 350
AfaI GTAC 3 cut(s) 84, 1837, 2260
AfiI CCNNNNNNNGG 5 cut(s) 233, 693, 1142, 1679, 2210
AhlI ACTAGT 1 cut(s) 751
AjnI CCWGG 3 cut(s) 1105, 1135, 2275
AjuI GAANNNNNNNTTGG 2 cut(s) 1190, 1222
Alw21I GWGCWC 1 cut(s) 1006
Alw26I GTCTC 4 cut(s) 1311, 1417, 1620, 2251
AlwI GGATC 1 cut(s) 1855
AlwNI CAGNNNCTG 1 cut(s) 1709
Aor13HI TCCGGA 1 cut(s) 226
ApoI RAATTY 4 cut(s) 218, 385, 1204, 1938
ArsI GACNNNNNNTTYG 2 cut(s) 964, 996
Asp700I GAANNNNTTC 1 cut(s) 1016
AspLEI GCGC 1 cut(s) 978
AspS9I GGNCC 1 cut(s) 2067
AsuC2I CCSGG 1 cut(s) 382
AsuHPI GGTGA 6 cut(s) 135, 752, 1066, 1124, 1463, 2265
AsuII TTCGAA 1 cut(s) 1020
AvaII GGWCC 1 cut(s) 2067
BanII GRGCYC 1 cut(s) 1006
BbsI GAAGAC 1 cut(s) 1398
Bbv12I GWGCWC 1 cut(s) 1006
BccI CCATC 5 cut(s) 16, 136, 1259, 1319, 2321
BceAI ACGGC 2 cut(s) 1730, 2003
BcgI CGANNNNNNTGC 2 cut(s) 1496, 1530
BciT130I CCWGG 3 cut(s) 1107, 1137, 2277
BclI TGATCA 1 cut(s) 2137
BcnI CCSGG 1 cut(s) 382
BcoDI GTCTC 4 cut(s) 1311, 1417, 1620, 2251
BcuI ACTAGT 1 cut(s) 751
BfaI CTAG 5 cut(s) 680, 752, 983, 1122, 1874
BfmI CTRYAG 2 cut(s) 336, 1804
BfoI RGCGCY 1 cut(s) 979
BfuAI ACCTGC 1 cut(s) 748
Bme1390I CCNGG 4 cut(s) 382, 1107, 1137, 2277
Bme18I GGWCC 1 cut(s) 2067
BmgT120I GGNCC 1 cut(s) 2067
BmiI GGNNCC 1 cut(s) 2068
BmrFI CCNGG 4 cut(s) 382, 1107, 1137, 2277
BmrI ACTGGG 1 cut(s) 342
BmsI GCATC 9 cut(s) 128, 250, 598, 967, 1103, 1137, 1348, 1718, 1781
BmuI ACTGGG 1 cut(s) 342
BpiI GAAGAC 1 cut(s) 1398
BplI GAGNNNNNCTC 4 cut(s) 1946, 1978, 2233, 2265
BpmI CTGGAG 2 cut(s) 15, 1464
Bpu10I CCTNAGC 1 cut(s) 110
Bpu14I TTCGAA 1 cut(s) 1020
BpuEI CTTGAG 2 cut(s) 252, 1257
BpuMI CCSGG 1 cut(s) 382
BsaI GGTCTC 1 cut(s) 2251
BsaJI CCNNGG 1 cut(s) 380
BsaWI WCCGGW 2 cut(s) 226, 2210
BsaXI ACNNNNNCTCC 2 cut(s) 2212, 2242
Bsc4I CCNNNNNNNGG 5 cut(s) 233, 693, 1142, 1679, 2210
Bse118I RCCGGY 1 cut(s) 1520
Bse1I ACTGG 6 cut(s) 32, 71, 348, 828, 1447, 2009
BseAI TCCGGA 1 cut(s) 226
BseBI CCWGG 3 cut(s) 1107, 1137, 2277
BseDI CCNNGG 1 cut(s) 380
BseLI CCNNNNNNNGG 5 cut(s) 233, 693, 1142, 1679, 2210
BseMII CTCAG 5 cut(s) 107, 456, 827, 1217, 1860
BseNI ACTGG 6 cut(s) 32, 71, 348, 828, 1447, 2009
BseRI GAGGAG 1 cut(s) 2241
BseYI CCCAGC 2 cut(s) 1702, 2340
BsgI GTGCAG 3 cut(s) 734, 776, 1695
BsiHKAI GWGCWC 1 cut(s) 1006
BsiSI CCGG 4 cut(s) 227, 382, 1521, 2211
BslFI GGGAC 2 cut(s) 589, 1697
BslI CCNNNNNNNGG 5 cut(s) 233, 693, 1142, 1679, 2210
BsmAI GTCTC 4 cut(s) 1311, 1417, 1620, 2251
BsmBI CGTCTC 1 cut(s) 1417
BsmFI GGGAC 2 cut(s) 589, 1697
BsmI GAATGC 2 cut(s) 1162, 1775
Bso31I GGTCTC 1 cut(s) 2251
Bsp119I TTCGAA 1 cut(s) 1020
Bsp1286I GDGCHC 1 cut(s) 1006
Bsp13I TCCGGA 1 cut(s) 226
Bsp1407I TGTACA 1 cut(s) 82
Bsp143I GATC 6 cut(s) 202, 802, 1847, 1921, 2042, 2137
BspACI CCGC 5 cut(s) 432, 611, 914, 1374, 2036
BspCNI CTCAG 5 cut(s) 106, 457, 826, 1218, 1861
BspEI TCCGGA 1 cut(s) 226
BspHI TCATGA 1 cut(s) 1576
BspLI GGNNCC 1 cut(s) 2068
BspMAI CTGCAG 1 cut(s) 1808
BspMI ACCTGC 1 cut(s) 748
BspPI GGATC 1 cut(s) 1855
BspQI GCTCTTC 1 cut(s) 1947
BspT104I TTCGAA 1 cut(s) 1020
BspTNI GGTCTC 1 cut(s) 2251
BsrBI CCGCTC 1 cut(s) 1376
BsrFI RCCGGY 1 cut(s) 1520
BsrGI TGTACA 1 cut(s) 82
BsrI ACTGG 6 cut(s) 32, 71, 348, 828, 1447, 2009
BssAI RCCGGY 1 cut(s) 1520
BssECI CCNNGG 1 cut(s) 380
BssMI GATC 6 cut(s) 202, 802, 1847, 1921, 2042, 2137
Bst2UI CCWGG 3 cut(s) 1107, 1137, 2277
Bst4CI ACNGT 7 cut(s) 401, 772, 1475, 1532, 1588, 2158, 2237
Bst6I CTCTTC 6 cut(s) 176, 289, 1007, 1415, 1947, 2077
BstAPI GCANNNNNTGC 2 cut(s) 754, 1467
BstAUI TGTACA 1 cut(s) 82
BstBI TTCGAA 1 cut(s) 1020
BstC8I GCNNGC 6 cut(s) 968, 1006, 1092, 1459, 1593, 2089
BstDEI CTNAG 6 cut(s) 93, 110, 465, 813, 1226, 1869
BstH2I RGCGCY 1 cut(s) 979
BstHHI GCGC 1 cut(s) 978
BstKTI GATC 6 cut(s) 205, 805, 1850, 1924, 2045, 2140
BstMAI GTCTC 4 cut(s) 1311, 1417, 1620, 2251
BstMBI GATC 6 cut(s) 202, 802, 1847, 1921, 2042, 2137
BstMWI GCNNNNNNNGC 7 cut(s) 111, 482, 724, 754, 1382, 1467, 1800
BstNI CCWGG 3 cut(s) 1107, 1137, 2277
BstNSI RCATGY 1 cut(s) 856
BstSCI CCNGG 4 cut(s) 380, 1105, 1135, 2275
BstSFI CTRYAG 2 cut(s) 336, 1804
BstV2I GAAGAC 1 cut(s) 1398
BstX2I RGATCY 1 cut(s) 1847
BstXI CCANNNNNNTGG 1 cut(s) 2099
BstYI RGATCY 1 cut(s) 1847
BtsIMutI CAGTG 7 cut(s) 39, 78, 355, 835, 1329, 1440, 2016
BveI ACCTGC 1 cut(s) 748
Cac8I GCNNGC 6 cut(s) 968, 1006, 1092, 1459, 1593, 2089
CaiI CAGNNNCTG 1 cut(s) 1709
CciI TCATGA 1 cut(s) 1576
CfoI GCGC 1 cut(s) 978
Cfr10I RCCGGY 1 cut(s) 1520
Cfr13I GGNCC 1 cut(s) 2067
CseI GACGC 2 cut(s) 659, 1434
CsiI ACCWGGT 2 cut(s) 1105, 2275
Csp6I GTAC 3 cut(s) 83, 1836, 2259
CviAII CATG 8 cut(s) 149, 688, 853, 925, 1321, 1548, 1577, 2256
CviQI GTAC 3 cut(s) 83, 1836, 2259
DdeI CTNAG 6 cut(s) 93, 110, 465, 813, 1226, 1869
DpnI GATC 6 cut(s) 204, 804, 1849, 1923, 2044, 2139
DpnII GATC 6 cut(s) 202, 802, 1847, 1921, 2042, 2137
DraI TTTAAA 1 cut(s) 867
DraIII CACNNNGTG 1 cut(s) 350
Eam1104I CTCTTC 6 cut(s) 176, 289, 1007, 1415, 1947, 2077
EarI CTCTTC 6 cut(s) 176, 289, 1007, 1415, 1947, 2077
Ecl136II GAGCTC 1 cut(s) 1004
Eco24I GRGCYC 1 cut(s) 1006
Eco31I GGTCTC 1 cut(s) 2251
Eco47I GGWCC 1 cut(s) 2067
Eco53kI GAGCTC 1 cut(s) 1004
Eco57I CTGAAG 4 cut(s) 200, 270, 462, 1284
EcoICRI GAGCTC 1 cut(s) 1004
EcoO109I RGGNCCY 1 cut(s) 2067
EcoRII CCWGG 3 cut(s) 1105, 1135, 2275
EcoT22I ATGCAT 1 cut(s) 1831
EcoT38I GRGCYC 1 cut(s) 1006
Esp3I CGTCTC 1 cut(s) 1417
FaeI CATG 8 cut(s) 152, 691, 856, 928, 1324, 1551, 1580, 2259
FaqI GGGAC 2 cut(s) 589, 1697
FatI CATG 8 cut(s) 148, 687, 852, 924, 1320, 1547, 1576, 2255
FbaI TGATCA 1 cut(s) 2137
FblI GTMKAC 1 cut(s) 1527
FriOI GRGCYC 1 cut(s) 1006
FspBI CTAG 5 cut(s) 680, 752, 983, 1122, 1874
GlaI GCGC 1 cut(s) 977
GsaI CCCAGC 2 cut(s) 1706, 2344
GsuI CTGGAG 2 cut(s) 15, 1464
HaeII RGCGCY 1 cut(s) 979
HapII CCGG 4 cut(s) 227, 382, 1521, 2211
HgaI GACGC 2 cut(s) 659, 1434
HhaI GCGC 1 cut(s) 978
Hin1II CATG 8 cut(s) 152, 691, 856, 928, 1324, 1551, 1580, 2259
Hin6I GCGC 1 cut(s) 976
HinP1I GCGC 1 cut(s) 976
HincII GTYRAC 1 cut(s) 785
HindII GTYRAC 1 cut(s) 785
HindIII AAGCTT 1 cut(s) 2096
HpaII CCGG 4 cut(s) 227, 382, 1521, 2211
HphI GGTGA 6 cut(s) 135, 752, 1066, 1124, 1463, 2265
Hpy166II GTNNAC 6 cut(s) 85, 353, 785, 883, 1528, 1604
Hpy8I GTNNAC 6 cut(s) 85, 353, 785, 883, 1528, 1604
HpyCH4III ACNGT 7 cut(s) 401, 772, 1475, 1532, 1588, 2158, 2237
HpyCH4IV ACGT 2 cut(s) 98, 1465
HpyF10VI GCNNNNNNNGC 7 cut(s) 111, 482, 724, 754, 1382, 1467, 1800
HpyF3I CTNAG 6 cut(s) 93, 110, 465, 813, 1226, 1869
HpySE526I ACGT 2 cut(s) 98, 1465
Hsp92II CATG 8 cut(s) 152, 691, 856, 928, 1324, 1551, 1580, 2259
HspAI GCGC 1 cut(s) 976
Kpn2I TCCGGA 1 cut(s) 226
Ksp22I TGATCA 1 cut(s) 2137
Kzo9I GATC 6 cut(s) 202, 802, 1847, 1921, 2042, 2137
LguI GCTCTTC 1 cut(s) 1947
LmnI GCTCC 7 cut(s) 110, 661, 821, 1001, 1642, 1675, 1799
LweI GCATC 9 cut(s) 128, 250, 598, 967, 1103, 1137, 1348, 1718, 1781
MabI ACCWGGT 2 cut(s) 1105, 2275
MaeI CTAG 5 cut(s) 680, 752, 983, 1122, 1874
MaeII ACGT 2 cut(s) 98, 1465
MaeIII GTNAC 2 cut(s) 449, 1072
MalI GATC 6 cut(s) 204, 804, 1849, 1923, 2044, 2139
MbiI CCGCTC 1 cut(s) 1376
MboI GATC 6 cut(s) 202, 802, 1847, 1921, 2042, 2137
MfeI CAATTG 2 cut(s) 708, 1732
MflI RGATCY 1 cut(s) 1847
MhlI GDGCHC 1 cut(s) 1006
MlyI GAGTC 4 cut(s) 446, 1298, 1622, 2223
MmeI TCCRAC 1 cut(s) 1768
Mph1103I ATGCAT 1 cut(s) 1831
MroI TCCGGA 1 cut(s) 226
MroXI GAANNNNTTC 1 cut(s) 1016
MseI TTAA 4 cut(s) 39, 657, 866, 897
MslI CAYNNNNRTG 1 cut(s) 1155
MspA1I CMGCKG 2 cut(s) 1268, 1348
MspI CCGG 4 cut(s) 227, 382, 1521, 2211
MspR9I CCNGG 4 cut(s) 382, 1107, 1137, 2277
MunI CAATTG 2 cut(s) 708, 1732
Mva1269I GAATGC 2 cut(s) 1162, 1775
MvaI CCWGG 3 cut(s) 1107, 1137, 2277
MwoI GCNNNNNNNGC 7 cut(s) 111, 482, 724, 754, 1382, 1467, 1800
NciI CCSGG 1 cut(s) 382
NdeII GATC 6 cut(s) 202, 802, 1847, 1921, 2042, 2137
NlaIII CATG 8 cut(s) 152, 691, 856, 928, 1324, 1551, 1580, 2259
NlaIV GGNNCC 1 cut(s) 2068
NmuCI GTSAC 2 cut(s) 449, 1072
NsiI ATGCAT 1 cut(s) 1831
NspI RCATGY 1 cut(s) 856
NspV TTCGAA 1 cut(s) 1020
PagI TCATGA 1 cut(s) 1576
PciSI GCTCTTC 1 cut(s) 1947
PcsI WCGNNNNNNNCGW 1 cut(s) 967
PctI GAATGC 2 cut(s) 1162, 1775
PdmI GAANNNNTTC 1 cut(s) 1016
PleI GAGTC 4 cut(s) 446, 1297, 1621, 2222
PpsI GAGTC 4 cut(s) 446, 1297, 1621, 2222
PpuMI RGGWCCY 1 cut(s) 2067
PsiI TTATAA 2 cut(s) 276, 950
Psp124BI GAGCTC 1 cut(s) 1006
Psp1406I AACGTT 1 cut(s) 1465
Psp5II RGGWCCY 1 cut(s) 2067
Psp6I CCWGG 3 cut(s) 1105, 1135, 2275
PspFI CCCAGC 2 cut(s) 1702, 2340
PspGI CCWGG 3 cut(s) 1105, 1135, 2275
PspN4I GGNNCC 1 cut(s) 2068
PspPI GGNCC 1 cut(s) 2067
PspPPI RGGWCCY 1 cut(s) 2067
PstI CTGCAG 1 cut(s) 1808
PstNI CAGNNNCTG 1 cut(s) 1709
PsuI RGATCY 1 cut(s) 1847
PvuII CAGCTG 2 cut(s) 1268, 1348
RsaI GTAC 3 cut(s) 84, 1837, 2260
RsaNI GTAC 3 cut(s) 83, 1836, 2259
RseI CAYNNNNRTG 1 cut(s) 1155
SacI GAGCTC 1 cut(s) 1006
SapI GCTCTTC 1 cut(s) 1947
SaqAI TTAA 4 cut(s) 39, 657, 866, 897
Sau3AI GATC 6 cut(s) 202, 802, 1847, 1921, 2042, 2137
Sau96I GGNCC 1 cut(s) 2067
SchI GAGTC 4 cut(s) 446, 1298, 1622, 2223
ScrFI CCNGG 4 cut(s) 382, 1107, 1137, 2277
SduI GDGCHC 1 cut(s) 1006
SexAI ACCWGGT 2 cut(s) 1105, 2275
SfaNI GCATC 9 cut(s) 128, 250, 598, 967, 1103, 1137, 1348, 1718, 1781
SfcI CTRYAG 2 cut(s) 336, 1804
SfuI TTCGAA 1 cut(s) 1020
SinI GGWCC 1 cut(s) 2067
SmiMI CAYNNNNRTG 1 cut(s) 1155
SmlI CTYRAG 2 cut(s) 267, 1272
SmoI CTYRAG 2 cut(s) 267, 1272
SpeI ACTAGT 1 cut(s) 751
SsiI CCGC 5 cut(s) 432, 611, 914, 1374, 2036
SspI AATATT 1 cut(s) 2113
SspMI CTAG 5 cut(s) 680, 752, 983, 1122, 1874
SstI GAGCTC 1 cut(s) 1006
StyD4I CCNGG 4 cut(s) 380, 1105, 1135, 2275
TaaI ACNGT 7 cut(s) 401, 772, 1475, 1532, 1588, 2158, 2237
TaiI ACGT 2 cut(s) 101, 1468
TaqI TCGA 2 cut(s) 1020, 2281
TatI WGTACW 1 cut(s) 82
TauI GCSGC 1 cut(s) 614
Tru1I TTAA 4 cut(s) 39, 657, 866, 897
Tru9I TTAA 4 cut(s) 39, 657, 866, 897
TscAI CASTG 7 cut(s) 39, 78, 355, 835, 1336, 1447, 2016
TseFI GTSAC 2 cut(s) 449, 1072
Tsp45I GTSAC 2 cut(s) 449, 1072
TspGWI ACGGA 2 cut(s) 121, 1932
TspRI CASTG 7 cut(s) 39, 78, 355, 835, 1336, 1447, 2016
VpaK11BI GGWCC 1 cut(s) 2067
XapI RAATTY 4 cut(s) 218, 385, 1204, 1938
XbaI TCTAGA 1 cut(s) 982
XceI RCATGY 1 cut(s) 856
XmiI GTMKAC 1 cut(s) 1527
XmnI GAANNNNTTC 1 cut(s) 1016
XspI CTAG 5 cut(s) 680, 752, 983, 1122, 1874
Zsp2I ATGCAT 1 cut(s) 1831
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.