No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 53 |
| AccI | GTMKAC | 1 cut(s) | 301 |
| AccII | CGCG | 1 cut(s) | 264 |
| AciI | CCGC | 4 cut(s) | 186, 264, 347, 478 |
| AclWI | GGATC | 1 cut(s) | 239 |
| AcoI | YGGCCR | 2 cut(s) | 311, 379 |
| AfaI | GTAC | 2 cut(s) | 295, 543 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 346, 377 |
| AflIII | ACRYGT | 1 cut(s) | 296 |
| AgsI | TTSAA | 2 cut(s) | 18, 35 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 91 |
| AhlI | ACTAGT | 1 cut(s) | 445 |
| AjiI | CACGTC | 1 cut(s) | 299 |
| AjnI | CCWGG | 2 cut(s) | 169, 462 |
| AjuI | GAANNNNNNNTTGG | 1 cut(s) | 30 |
| AluBI | AGCT | 6 cut(s) | 194, 235, 257, 357, 459, 599 |
| AluI | AGCT | 6 cut(s) | 194, 235, 257, 357, 459, 599 |
| Alw21I | GWGCWC | 1 cut(s) | 227 |
| Alw26I | GTCTC | 1 cut(s) | 509 |
| Alw44I | GTGCAC | 1 cut(s) | 223 |
| AlwI | GGATC | 1 cut(s) | 239 |
| Ama87I | CYCGRG | 1 cut(s) | 547 |
| AoxI | GGCC | 2 cut(s) | 311, 379 |
| ApaLI | GTGCAC | 1 cut(s) | 223 |
| ApeKI | GCWGC | 1 cut(s) | 325 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 573 |
| AspLEI | GCGC | 3 cut(s) | 54, 264, 270 |
| AspS9I | GGNCC | 1 cut(s) | 337 |
| AsuC2I | CCSGG | 3 cut(s) | 310, 548, 549 |
| AsuHPI | GGTGA | 3 cut(s) | 82, 200, 254 |
| AvaI | CYCGRG | 1 cut(s) | 547 |
| AvaII | GGWCC | 1 cut(s) | 337 |
| BaeGI | GKGCMC | 1 cut(s) | 227 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 525, 558 |
| BalI | TGGCCA | 1 cut(s) | 381 |
| Bbv12I | GWGCWC | 1 cut(s) | 227 |
| BbvI | GCAGC | 1 cut(s) | 312 |
| BccI | CCATC | 3 cut(s) | 214, 233, 572 |
| BciT130I | CCWGG | 2 cut(s) | 171, 464 |
| BclI | TGATCA | 1 cut(s) | 178 |
| BcnI | CCSGG | 3 cut(s) | 310, 548, 549 |
| BcoDI | GTCTC | 1 cut(s) | 509 |
| BcuI | ACTAGT | 1 cut(s) | 445 |
| BfaI | CTAG | 5 cut(s) | 41, 236, 446, 456, 596 |
| BfoI | RGCGCY | 1 cut(s) | 271 |
| BisI | GCNGC | 2 cut(s) | 326, 479 |
| BlsI | GCNGC | 2 cut(s) | 327, 480 |
| Bme1390I | CCNGG | 5 cut(s) | 171, 310, 464, 548, 549 |
| Bme18I | GGWCC | 1 cut(s) | 337 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 91 |
| BmeT110I | CYCGRG | 1 cut(s) | 547 |
| BmgBI | CACGTC | 1 cut(s) | 299 |
| BmgT120I | GGNCC | 1 cut(s) | 337 |
| BmiI | GGNNCC | 2 cut(s) | 287, 492 |
| BmrFI | CCNGG | 5 cut(s) | 171, 310, 464, 548, 549 |
| BmrI | ACTGGG | 1 cut(s) | 95 |
| BmsI | GCATC | 1 cut(s) | 340 |
| BmuI | ACTGGG | 1 cut(s) | 95 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 506, 538 |
| BpuMI | CCSGG | 3 cut(s) | 310, 548, 549 |
| BsaBI | GATNNNNATC | 1 cut(s) | 243 |
| BsaI | GGTCTC | 1 cut(s) | 509 |
| BsaJI | CCNNGG | 3 cut(s) | 78, 546, 547 |
| BsaWI | WCCGGW | 1 cut(s) | 247 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 54, 84, 274, 304 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 346, 377 |
| Bse118I | RCCGGY | 1 cut(s) | 313 |
| Bse1I | ACTGG | 3 cut(s) | 101, 210, 494 |
| Bse3DI | GCAATG | 1 cut(s) | 589 |
| Bse8I | GATNNNNATC | 1 cut(s) | 243 |
| BseBI | CCWGG | 2 cut(s) | 171, 464 |
| BseDI | CCNNGG | 3 cut(s) | 78, 546, 547 |
| BseGI | GGATG | 4 cut(s) | 133, 206, 355, 472 |
| BseJI | GATNNNNATC | 1 cut(s) | 243 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 346, 377 |
| BseMI | GCAATG | 1 cut(s) | 589 |
| BseMII | CTCAG | 2 cut(s) | 39, 569 |
| BseNI | ACTGG | 3 cut(s) | 101, 210, 494 |
| BseRI | GAGGAG | 3 cut(s) | 511, 514, 517 |
| BseSI | GKGCMC | 1 cut(s) | 227 |
| BseX3I | CGGCCG | 1 cut(s) | 311 |
| BseXI | GCAGC | 1 cut(s) | 312 |
| BseYI | CCCAGC | 1 cut(s) | 257 |
| Bsh1236I | CGCG | 1 cut(s) | 264 |
| Bsh1285I | CGRYCG | 1 cut(s) | 314 |
| BshFI | GGCC | 2 cut(s) | 313, 381 |
| BsiEI | CGRYCG | 1 cut(s) | 314 |
| BsiHKAI | GWGCWC | 1 cut(s) | 227 |
| BsiHKCI | CYCGRG | 1 cut(s) | 547 |
| BsiSI | CCGG | 4 cut(s) | 248, 310, 314, 548 |
| BslFI | GGGAC | 1 cut(s) | 83 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 346, 377 |
| BsmAI | GTCTC | 1 cut(s) | 509 |
| BsmFI | GGGAC | 1 cut(s) | 83 |
| BsnI | GGCC | 2 cut(s) | 313, 381 |
| Bso31I | GGTCTC | 1 cut(s) | 509 |
| BsoBI | CYCGRG | 1 cut(s) | 547 |
| Bsp1286I | GDGCHC | 1 cut(s) | 227 |
| Bsp143I | GATC | 3 cut(s) | 178, 244, 275 |
| BspACI | CCGC | 4 cut(s) | 186, 264, 347, 478 |
| BspANI | GGCC | 2 cut(s) | 313, 381 |
| BspCNI | CTCAG | 2 cut(s) | 38, 570 |
| BspFNI | CGCG | 1 cut(s) | 264 |
| BspLI | GGNNCC | 2 cut(s) | 287, 492 |
| BspPI | GGATC | 1 cut(s) | 239 |
| BspTNI | GGTCTC | 1 cut(s) | 509 |
| BsrDI | GCAATG | 1 cut(s) | 589 |
| BsrFI | RCCGGY | 1 cut(s) | 313 |
| BsrI | ACTGG | 3 cut(s) | 101, 210, 494 |
| BssAI | RCCGGY | 1 cut(s) | 313 |
| BssECI | CCNNGG | 3 cut(s) | 78, 546, 547 |
| BssMI | GATC | 3 cut(s) | 178, 244, 275 |
| Bst2UI | CCWGG | 2 cut(s) | 171, 464 |
| Bst4CI | ACNGT | 5 cut(s) | 82, 290, 322, 424, 487 |
| Bst6I | CTCTTC | 1 cut(s) | 19 |
| BstC8I | GCNNGC | 3 cut(s) | 266, 355, 379 |
| BstDEI | CTNAG | 3 cut(s) | 25, 578, 600 |
| BstDSI | CCRYGG | 1 cut(s) | 78 |
| BstF5I | GGATG | 4 cut(s) | 133, 206, 355, 472 |
| BstFNI | CGCG | 1 cut(s) | 264 |
| BstH2I | RGCGCY | 1 cut(s) | 271 |
| BstHHI | GCGC | 3 cut(s) | 54, 264, 270 |
| BstKTI | GATC | 3 cut(s) | 181, 247, 278 |
| BstMAI | GTCTC | 1 cut(s) | 509 |
| BstMBI | GATC | 3 cut(s) | 178, 244, 275 |
| BstMCI | CGRYCG | 1 cut(s) | 314 |
| BstNI | CCWGG | 2 cut(s) | 171, 464 |
| BstSCI | CCNGG | 5 cut(s) | 169, 308, 462, 546, 547 |
| BstSLI | GKGCMC | 1 cut(s) | 227 |
| BstUI | CGCG | 1 cut(s) | 264 |
| BstV1I | GCAGC | 1 cut(s) | 312 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 239 |
| BstZI | CGGCCG | 1 cut(s) | 311 |
| BsuRI | GGCC | 2 cut(s) | 313, 381 |
| BtgI | CCRYGG | 1 cut(s) | 78 |
| BtrI | CACGTC | 1 cut(s) | 299 |
| BtsCI | GGATG | 4 cut(s) | 133, 206, 355, 472 |
| BtsIMutI | CAGTG | 3 cut(s) | 108, 227, 492 |
| Cac8I | GCNNGC | 3 cut(s) | 266, 355, 379 |
| CfoI | GCGC | 3 cut(s) | 54, 264, 270 |
| Cfr10I | RCCGGY | 1 cut(s) | 313 |
| Cfr13I | GGNCC | 1 cut(s) | 337 |
| Cfr9I | CCCGGG | 1 cut(s) | 547 |
| CseI | GACGC | 1 cut(s) | 312 |
| Csp6I | GTAC | 2 cut(s) | 294, 542 |
| CviAII | CATG | 3 cut(s) | 59, 279, 401 |
| CviQI | GTAC | 2 cut(s) | 294, 542 |
| DdeI | CTNAG | 3 cut(s) | 25, 578, 600 |
| DpnI | GATC | 3 cut(s) | 180, 246, 277 |
| DpnII | GATC | 3 cut(s) | 178, 244, 275 |
| DriI | GACNNNNNGTC | 1 cut(s) | 91 |
| EaeI | YGGCCR | 2 cut(s) | 311, 379 |
| EagI | CGGCCG | 1 cut(s) | 311 |
| Eam1104I | CTCTTC | 1 cut(s) | 19 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 91 |
| EarI | CTCTTC | 1 cut(s) | 19 |
| EciI | GGCGGA | 1 cut(s) | 362 |
| EclXI | CGGCCG | 1 cut(s) | 311 |
| Eco31I | GGTCTC | 1 cut(s) | 509 |
| Eco47I | GGWCC | 1 cut(s) | 337 |
| Eco52I | CGGCCG | 1 cut(s) | 311 |
| Eco88I | CYCGRG | 1 cut(s) | 547 |
| EcoO109I | RGGNCCY | 1 cut(s) | 337 |
| EcoRII | CCWGG | 2 cut(s) | 169, 462 |
| FaeI | CATG | 3 cut(s) | 62, 282, 404 |
| FaiI | YATR | 7 cut(s) | 60, 90, 229, 280, 402, 483, 573 |
| FaqI | GGGAC | 1 cut(s) | 83 |
| FatI | CATG | 3 cut(s) | 58, 278, 400 |
| FauI | CCCGC | 1 cut(s) | 257 |
| FbaI | TGATCA | 1 cut(s) | 178 |
| FblI | GTMKAC | 1 cut(s) | 301 |
| Fnu4HI | GCNGC | 2 cut(s) | 326, 479 |
| FokI | GGATG | 4 cut(s) | 120, 193, 362, 479 |
| Fsp4HI | GCNGC | 2 cut(s) | 326, 479 |
| FspAI | RTGCGCAY | 1 cut(s) | 53 |
| FspBI | CTAG | 5 cut(s) | 41, 236, 446, 456, 596 |
| FspI | TGCGCA | 1 cut(s) | 53 |
| GlaI | GCGC | 3 cut(s) | 53, 263, 269 |
| GluI | GCNGC | 2 cut(s) | 326, 479 |
| GsaI | CCCAGC | 1 cut(s) | 261 |
| HaeII | RGCGCY | 1 cut(s) | 271 |
| HaeIII | GGCC | 2 cut(s) | 313, 381 |
| HapII | CCGG | 4 cut(s) | 248, 310, 314, 548 |
| HgaI | GACGC | 1 cut(s) | 312 |
| HhaI | GCGC | 3 cut(s) | 54, 264, 270 |
| Hin1II | CATG | 3 cut(s) | 62, 282, 404 |
| Hin6I | GCGC | 3 cut(s) | 52, 262, 268 |
| HinP1I | GCGC | 3 cut(s) | 52, 262, 268 |
| HincII | GTYRAC | 3 cut(s) | 85, 142, 302 |
| HindII | GTYRAC | 3 cut(s) | 85, 142, 302 |
| HindIII | AAGCTT | 2 cut(s) | 192, 355 |
| HinfI | GANTC | 2 cut(s) | 65, 92 |
| HpaII | CCGG | 4 cut(s) | 248, 310, 314, 548 |
| HphI | GGTGA | 3 cut(s) | 82, 200, 254 |
| Hpy166II | GTNNAC | 5 cut(s) | 85, 142, 225, 296, 302 |
| Hpy188I | TCNGA | 3 cut(s) | 199, 275, 579 |
| Hpy8I | GTNNAC | 5 cut(s) | 85, 142, 225, 296, 302 |
| Hpy99I | CGWCG | 3 cut(s) | 294, 303, 306 |
| HpyAV | CCTTC | 2 cut(s) | 19, 381 |
| HpyCH4III | ACNGT | 5 cut(s) | 82, 290, 322, 424, 487 |
| HpyCH4IV | ACGT | 2 cut(s) | 298, 507 |
| HpyCH4V | TGCA | 2 cut(s) | 225, 353 |
| HpyF3I | CTNAG | 3 cut(s) | 25, 578, 600 |
| HpySE526I | ACGT | 2 cut(s) | 298, 507 |
| Hsp92II | CATG | 3 cut(s) | 62, 282, 404 |
| HspAI | GCGC | 3 cut(s) | 52, 262, 268 |
| Ksp22I | TGATCA | 1 cut(s) | 178 |
| Kzo9I | GATC | 3 cut(s) | 178, 244, 275 |
| LmnI | GCTCC | 2 cut(s) | 311, 490 |
| Lsp1109I | GCAGC | 1 cut(s) | 312 |
| LweI | GCATC | 1 cut(s) | 340 |
| MaeI | CTAG | 5 cut(s) | 41, 236, 446, 456, 596 |
| MaeII | ACGT | 2 cut(s) | 298, 507 |
| MaeIII | GTNAC | 1 cut(s) | 316 |
| MalI | GATC | 3 cut(s) | 180, 246, 277 |
| MboI | GATC | 3 cut(s) | 178, 244, 275 |
| MboII | GAAGA | 1 cut(s) | 6 |
| MhlI | GDGCHC | 1 cut(s) | 227 |
| MlsI | TGGCCA | 1 cut(s) | 381 |
| MluCI | AATT | 1 cut(s) | 411 |
| MluNI | TGGCCA | 1 cut(s) | 381 |
| MlyI | GAGTC | 1 cut(s) | 101 |
| MmeI | TCCRAC | 1 cut(s) | 490 |
| MnlI | CCTC | 7 cut(s) | 32, 276, 378, 529, 532, 535, 538 |
| Mox20I | TGGCCA | 1 cut(s) | 381 |
| MroXI | GAANNNNTTC | 1 cut(s) | 573 |
| MscI | TGGCCA | 1 cut(s) | 381 |
| MslI | CAYNNNNRTG | 1 cut(s) | 405 |
| Msp20I | TGGCCA | 1 cut(s) | 381 |
| MspI | CCGG | 4 cut(s) | 248, 310, 314, 548 |
| MspR9I | CCNGG | 5 cut(s) | 171, 310, 464, 548, 549 |
| MvaI | CCWGG | 2 cut(s) | 171, 464 |
| MvnI | CGCG | 1 cut(s) | 264 |
| NciI | CCSGG | 3 cut(s) | 310, 548, 549 |
| NdeII | GATC | 3 cut(s) | 178, 244, 275 |
| NlaIII | CATG | 3 cut(s) | 62, 282, 404 |
| NlaIV | GGNNCC | 2 cut(s) | 287, 492 |
| NsbI | TGCGCA | 1 cut(s) | 53 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 298 |
| PdmI | GAANNNNTTC | 1 cut(s) | 573 |
| PfeI | GAWTC | 1 cut(s) | 65 |
| PfoI | TCCNGGA | 1 cut(s) | 462 |
| PkrI | GCNGC | 2 cut(s) | 327, 480 |
| PleI | GAGTC | 1 cut(s) | 100 |
| PpsI | GAGTC | 1 cut(s) | 100 |
| PpuMI | RGGWCCY | 1 cut(s) | 337 |
| Psp5II | RGGWCCY | 1 cut(s) | 337 |
| Psp6I | CCWGG | 2 cut(s) | 169, 462 |
| PspFI | CCCAGC | 1 cut(s) | 257 |
| PspGI | CCWGG | 2 cut(s) | 169, 462 |
| PspN4I | GGNNCC | 2 cut(s) | 287, 492 |
| PspPI | GGNCC | 1 cut(s) | 337 |
| PspPPI | RGGWCCY | 1 cut(s) | 337 |
| RsaI | GTAC | 2 cut(s) | 295, 543 |
| RsaNI | GTAC | 2 cut(s) | 294, 542 |
| RseI | CAYNNNNRTG | 1 cut(s) | 405 |
| SalI | GTCGAC | 1 cut(s) | 300 |
| SatI | GCNGC | 2 cut(s) | 326, 479 |
| Sau3AI | GATC | 3 cut(s) | 178, 244, 275 |
| Sau96I | GGNCC | 1 cut(s) | 337 |
| SchI | GAGTC | 1 cut(s) | 101 |
| ScrFI | CCNGG | 5 cut(s) | 171, 310, 464, 548, 549 |
| SduI | GDGCHC | 1 cut(s) | 227 |
| SfaNI | GCATC | 1 cut(s) | 340 |
| SgrDI | CGTCGACG | 1 cut(s) | 300 |
| SinI | GGWCC | 1 cut(s) | 337 |
| SmaI | CCCGGG | 1 cut(s) | 549 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 405 |
| SpeI | ACTAGT | 1 cut(s) | 445 |
| Sse9I | AATT | 1 cut(s) | 411 |
| SsiI | CCGC | 4 cut(s) | 186, 264, 347, 478 |
| SspMI | CTAG | 5 cut(s) | 41, 236, 446, 456, 596 |
| StyD4I | CCNGG | 5 cut(s) | 169, 308, 462, 546, 547 |
| TaaI | ACNGT | 5 cut(s) | 82, 290, 322, 424, 487 |
| TaiI | ACGT | 2 cut(s) | 301, 510 |
| TaqI | TCGA | 2 cut(s) | 301, 567 |
| TasI | AATT | 1 cut(s) | 411 |
| TauI | GCSGC | 1 cut(s) | 481 |
| TfiI | GAWTC | 1 cut(s) | 65 |
| TscAI | CASTG | 3 cut(s) | 108, 227, 492 |
| TseI | GCWGC | 1 cut(s) | 325 |
| TspDTI | ATGAA | 1 cut(s) | 417 |
| TspMI | CCCGGG | 1 cut(s) | 547 |
| TspRI | CASTG | 3 cut(s) | 108, 227, 492 |
| VneI | GTGCAC | 1 cut(s) | 223 |
| VpaK11BI | GGWCC | 1 cut(s) | 337 |
| XmaI | CCCGGG | 1 cut(s) | 547 |
| XmiI | GTMKAC | 1 cut(s) | 301 |
| XmnI | GAANNNNTTC | 1 cut(s) | 573 |
| XspI | CTAG | 5 cut(s) | 41, 236, 446, 456, 596 |