40s ribosomal protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| S10_plectin | PF03501 | 35 - 65 | 6e-06 | Plectin/S10 domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 166 |
| Acc36I | ACCTGC | 2 cut(s) | 166, 511 |
| AccB1I | GGYRCC | 1 cut(s) | 258 |
| AccI | GTMKAC | 1 cut(s) | 114 |
| AciI | CCGC | 3 cut(s) | 26, 102, 365 |
| AcyI | GRCGYC | 1 cut(s) | 229 |
| AfaI | GTAC | 1 cut(s) | 283 |
| AgsI | TTSAA | 3 cut(s) | 32, 40, 500 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 360 |
| AjnI | CCWGG | 3 cut(s) | 235, 450, 559 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 498, 530 |
| AluBI | AGCT | 4 cut(s) | 8, 187, 413, 582 |
| AluI | AGCT | 4 cut(s) | 8, 187, 413, 582 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 473 |
| AoxI | GGCC | 2 cut(s) | 238, 347 |
| AspS9I | GGNCC | 1 cut(s) | 239 |
| AsuHPI | GGTGA | 2 cut(s) | 190, 549 |
| BanI | GGYRCC | 1 cut(s) | 258 |
| BceAI | ACGGC | 1 cut(s) | 262 |
| BciT130I | CCWGG | 3 cut(s) | 237, 452, 561 |
| BfaI | CTAG | 5 cut(s) | 216, 225, 345, 405, 586 |
| BfmI | CTRYAG | 1 cut(s) | 173 |
| BfuAI | ACCTGC | 2 cut(s) | 166, 511 |
| BglI | GCCNNNNNGGC | 2 cut(s) | 237, 246 |
| Bme1390I | CCNGG | 3 cut(s) | 237, 452, 561 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 360 |
| BmgT120I | GGNCC | 1 cut(s) | 239 |
| BmiI | GGNNCC | 1 cut(s) | 260 |
| BmrFI | CCNGG | 3 cut(s) | 237, 452, 561 |
| BmsI | GCATC | 1 cut(s) | 376 |
| Bsa29I | ATCGAT | 1 cut(s) | 159 |
| BsaAI | YACGTR | 1 cut(s) | 578 |
| BsaHI | GRCGYC | 1 cut(s) | 229 |
| BsaJI | CCNNGG | 3 cut(s) | 105, 295, 390 |
| Bse118I | RCCGGY | 1 cut(s) | 442 |
| BseBI | CCWGG | 3 cut(s) | 237, 452, 561 |
| BseCI | ATCGAT | 1 cut(s) | 159 |
| BseDI | CCNNGG | 3 cut(s) | 105, 295, 390 |
| BseGI | GGATG | 1 cut(s) | 391 |
| BseMII | CTCAG | 1 cut(s) | 144 |
| BseRI | GAGGAG | 3 cut(s) | 337, 340, 545 |
| BshFI | GGCC | 2 cut(s) | 240, 349 |
| BshNI | GGYRCC | 1 cut(s) | 258 |
| BshVI | ATCGAT | 1 cut(s) | 159 |
| BsiSI | CCGG | 2 cut(s) | 319, 443 |
| BsmI | GAATGC | 1 cut(s) | 148 |
| BsnI | GGCC | 2 cut(s) | 240, 349 |
| Bsp143I | GATC | 4 cut(s) | 64, 83, 156, 302 |
| BspACI | CCGC | 3 cut(s) | 26, 102, 365 |
| BspANI | GGCC | 2 cut(s) | 240, 349 |
| BspCNI | CTCAG | 1 cut(s) | 145 |
| BspDI | ATCGAT | 1 cut(s) | 159 |
| BspLI | GGNNCC | 1 cut(s) | 260 |
| BspMAI | CTGCAG | 1 cut(s) | 177 |
| BspMI | ACCTGC | 2 cut(s) | 166, 511 |
| BspQI | GCTCTTC | 1 cut(s) | 15 |
| BspT107I | GGYRCC | 1 cut(s) | 258 |
| BsrFI | RCCGGY | 1 cut(s) | 442 |
| BssAI | RCCGGY | 1 cut(s) | 442 |
| BssECI | CCNNGG | 3 cut(s) | 105, 295, 390 |
| BssMI | GATC | 4 cut(s) | 64, 83, 156, 302 |
| BssNI | GRCGYC | 1 cut(s) | 229 |
| Bst2UI | CCWGG | 3 cut(s) | 237, 452, 561 |
| Bst4CI | ACNGT | 1 cut(s) | 362 |
| Bst6I | CTCTTC | 1 cut(s) | 15 |
| BstACI | GRCGYC | 1 cut(s) | 229 |
| BstBAI | YACGTR | 1 cut(s) | 578 |
| BstC8I | GCNNGC | 3 cut(s) | 369, 440, 444 |
| BstDEI | CTNAG | 1 cut(s) | 153 |
| BstF5I | GGATG | 1 cut(s) | 391 |
| BstKTI | GATC | 4 cut(s) | 67, 86, 159, 305 |
| BstMBI | GATC | 4 cut(s) | 64, 83, 156, 302 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 172, 237, 246, 401, 410, 439 |
| BstNI | CCWGG | 3 cut(s) | 237, 452, 561 |
| BstNSI | RCATGY | 2 cut(s) | 399, 442 |
| BstSCI | CCNGG | 3 cut(s) | 235, 450, 559 |
| BstSFI | CTRYAG | 1 cut(s) | 173 |
| BstSNI | TACGTA | 1 cut(s) | 578 |
| Bsu15I | ATCGAT | 1 cut(s) | 159 |
| BsuRI | GGCC | 2 cut(s) | 240, 349 |
| BsuTUI | ATCGAT | 1 cut(s) | 159 |
| BtsCI | GGATG | 1 cut(s) | 391 |
| BveI | ACCTGC | 2 cut(s) | 166, 511 |
| Cac8I | GCNNGC | 3 cut(s) | 369, 440, 444 |
| CaiI | CAGNNNCTG | 1 cut(s) | 473 |
| Cfr10I | RCCGGY | 1 cut(s) | 442 |
| Cfr13I | GGNCC | 1 cut(s) | 239 |
| ClaI | ATCGAT | 1 cut(s) | 159 |
| CseI | GACGC | 2 cut(s) | 199, 237 |
| CsiI | ACCWGGT | 1 cut(s) | 450 |
| Csp6I | GTAC | 1 cut(s) | 282 |
| CviAII | CATG | 7 cut(s) | 255, 334, 396, 435, 439, 458, 509 |
| CviQI | GTAC | 1 cut(s) | 282 |
| DdeI | CTNAG | 1 cut(s) | 153 |
| DpnI | GATC | 4 cut(s) | 66, 85, 158, 304 |
| DpnII | GATC | 4 cut(s) | 64, 83, 156, 302 |
| DriI | GACNNNNNGTC | 1 cut(s) | 360 |
| Eam1104I | CTCTTC | 1 cut(s) | 15 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 360 |
| EarI | CTCTTC | 1 cut(s) | 15 |
| EciI | GGCGGA | 1 cut(s) | 354 |
| Eco105I | TACGTA | 1 cut(s) | 578 |
| Eco147I | AGGCCT | 1 cut(s) | 349 |
| EcoRII | CCWGG | 3 cut(s) | 235, 450, 559 |
| EcoT22I | ATGCAT | 1 cut(s) | 440 |
| FaeI | CATG | 7 cut(s) | 258, 337, 399, 438, 442, 461, 512 |
| FatI | CATG | 7 cut(s) | 254, 333, 395, 434, 438, 457, 508 |
| FblI | GTMKAC | 1 cut(s) | 114 |
| FokI | GGATG | 1 cut(s) | 398 |
| FspBI | CTAG | 5 cut(s) | 216, 225, 345, 405, 586 |
| HaeIII | GGCC | 2 cut(s) | 240, 349 |
| HapII | CCGG | 2 cut(s) | 319, 443 |
| HgaI | GACGC | 2 cut(s) | 199, 237 |
| Hin1I | GRCGYC | 1 cut(s) | 229 |
| Hin1II | CATG | 7 cut(s) | 258, 337, 399, 438, 442, 461, 512 |
| HinfI | GANTC | 3 cut(s) | 111, 169, 355 |
| HpaII | CCGG | 2 cut(s) | 319, 443 |
| HphI | GGTGA | 2 cut(s) | 190, 549 |
| Hpy166II | GTNNAC | 2 cut(s) | 115, 506 |
| Hpy188I | TCNGA | 5 cut(s) | 64, 93, 154, 529, 570 |
| Hpy8I | GTNNAC | 2 cut(s) | 115, 506 |
| Hpy99I | CGWCG | 1 cut(s) | 318 |
| HpyAV | CCTTC | 4 cut(s) | 24, 30, 53, 121 |
| HpyCH4III | ACNGT | 1 cut(s) | 362 |
| HpyCH4IV | ACGT | 2 cut(s) | 502, 577 |
| HpyCH4V | TGCA | 7 cut(s) | 81, 122, 175, 275, 421, 438, 457 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 172, 237, 246, 401, 410, 439 |
| HpyF3I | CTNAG | 1 cut(s) | 153 |
| HpySE526I | ACGT | 2 cut(s) | 502, 577 |
| Hsp92I | GRCGYC | 1 cut(s) | 229 |
| Hsp92II | CATG | 7 cut(s) | 258, 337, 399, 438, 442, 461, 512 |
| KroI | GCCGGC | 1 cut(s) | 442 |
| KroNI | GCCGGC | 1 cut(s) | 444 |
| Kzo9I | GATC | 4 cut(s) | 64, 83, 156, 302 |
| LguI | GCTCTTC | 1 cut(s) | 15 |
| LmnI | GCTCC | 1 cut(s) | 587 |
| LweI | GCATC | 1 cut(s) | 376 |
| MabI | ACCWGGT | 1 cut(s) | 450 |
| MaeI | CTAG | 5 cut(s) | 216, 225, 345, 405, 586 |
| MaeII | ACGT | 2 cut(s) | 502, 577 |
| MalI | GATC | 4 cut(s) | 66, 85, 158, 304 |
| MboI | GATC | 4 cut(s) | 64, 83, 156, 302 |
| MboII | GAAGA | 3 cut(s) | 28, 108, 531 |
| MluCI | AATT | 3 cut(s) | 32, 87, 462 |
| MlyI | GAGTC | 2 cut(s) | 120, 349 |
| Mph1103I | ATGCAT | 1 cut(s) | 440 |
| MroNI | GCCGGC | 1 cut(s) | 442 |
| MseI | TTAA | 2 cut(s) | 183, 429 |
| MspI | CCGG | 2 cut(s) | 319, 443 |
| MspR9I | CCNGG | 3 cut(s) | 237, 452, 561 |
| Mva1269I | GAATGC | 1 cut(s) | 148 |
| MvaI | CCWGG | 3 cut(s) | 237, 452, 561 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 172, 237, 246, 401, 410, 439 |
| NaeI | GCCGGC | 1 cut(s) | 444 |
| NdeII | GATC | 4 cut(s) | 64, 83, 156, 302 |
| NgoMIV | GCCGGC | 1 cut(s) | 442 |
| NlaIII | CATG | 7 cut(s) | 258, 337, 399, 438, 442, 461, 512 |
| NlaIV | GGNNCC | 1 cut(s) | 260 |
| NmeAIII | GCCGAG | 2 cut(s) | 130, 415 |
| NsiI | ATGCAT | 1 cut(s) | 440 |
| NspI | RCATGY | 2 cut(s) | 399, 442 |
| PaeI | GCATGC | 1 cut(s) | 442 |
| PaqCI | CACCTGC | 1 cut(s) | 166 |
| PceI | AGGCCT | 1 cut(s) | 349 |
| PciSI | GCTCTTC | 1 cut(s) | 15 |
| PctI | GAATGC | 1 cut(s) | 148 |
| PdiI | GCCGGC | 1 cut(s) | 444 |
| PfeI | GAWTC | 1 cut(s) | 169 |
| PleI | GAGTC | 2 cut(s) | 119, 349 |
| PpsI | GAGTC | 2 cut(s) | 119, 349 |
| Ppu21I | YACGTR | 1 cut(s) | 578 |
| Psp6I | CCWGG | 3 cut(s) | 235, 450, 559 |
| PspGI | CCWGG | 3 cut(s) | 235, 450, 559 |
| PspN4I | GGNNCC | 1 cut(s) | 260 |
| PspPI | GGNCC | 1 cut(s) | 239 |
| PstI | CTGCAG | 1 cut(s) | 177 |
| PstNI | CAGNNNCTG | 1 cut(s) | 473 |
| RsaI | GTAC | 1 cut(s) | 283 |
| RsaNI | GTAC | 1 cut(s) | 282 |
| SapI | GCTCTTC | 1 cut(s) | 15 |
| SaqAI | TTAA | 2 cut(s) | 183, 429 |
| Sau3AI | GATC | 4 cut(s) | 64, 83, 156, 302 |
| Sau96I | GGNCC | 1 cut(s) | 239 |
| SchI | GAGTC | 2 cut(s) | 120, 349 |
| ScrFI | CCNGG | 3 cut(s) | 237, 452, 561 |
| SexAI | ACCWGGT | 1 cut(s) | 450 |
| SfaNI | GCATC | 1 cut(s) | 376 |
| SfcI | CTRYAG | 1 cut(s) | 173 |
| SnaBI | TACGTA | 1 cut(s) | 578 |
| SphI | GCATGC | 1 cut(s) | 442 |
| Sse9I | AATT | 3 cut(s) | 32, 87, 462 |
| SseBI | AGGCCT | 1 cut(s) | 349 |
| SsiI | CCGC | 3 cut(s) | 26, 102, 365 |
| SspMI | CTAG | 5 cut(s) | 216, 225, 345, 405, 586 |
| StuI | AGGCCT | 1 cut(s) | 349 |
| StyD4I | CCNGG | 3 cut(s) | 235, 450, 559 |
| TaaI | ACNGT | 1 cut(s) | 362 |
| TaiI | ACGT | 2 cut(s) | 505, 580 |
| TaqI | TCGA | 2 cut(s) | 159, 301 |
| TasI | AATT | 3 cut(s) | 32, 87, 462 |
| TfiI | GAWTC | 1 cut(s) | 169 |
| Tru1I | TTAA | 2 cut(s) | 183, 429 |
| Tru9I | TTAA | 2 cut(s) | 183, 429 |
| TspDTI | ATGAA | 1 cut(s) | 474 |
| XceI | RCATGY | 2 cut(s) | 399, 442 |
| XmiI | GTMKAC | 1 cut(s) | 114 |
| XspI | CTAG | 5 cut(s) | 216, 225, 345, 405, 586 |
| Zsp2I | ATGCAT | 1 cut(s) | 440 |