Rh5AG161500

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5A
OG0000044
Physical Location & Seq
Forward (+)
17345195 .. 17357110
11916 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5AG161500.1

Sequence Viewer

Length: 1146 bp
ATGGCCTCTGAAGGCTCTGATTCAGGAACTCAATCCAGTCACTCCACTAATTCAGTAACTGGCAATGAGCTCATGGCTGTTCCACAAAATGGAGATGGTCAACAGAATCAAATATCATCTCCTTCTCCAGCAACTCGAGCTTCAAAAACAAAAGGGAAGAAGAAGTTTGAGCCTGCGAACATGAAGCAAAAGAGGGATAAGAAGGCCAAGAAGGAGAGGTCCGAAGTGTGGGAGCATTTCACCAAATTCGACAAGCCTTTACTGGAGGTCGTGGATGGACAGGAGATTGTAGTTGGCAGTACAAAGAGAGCTCAGTATAAGTGTTCACATTGCGGGGTCATTGGTCACTCCGTGGGCCGCTGCAGACATTTGCAAAAGCAGGAGCCTAAGACTCGCTCCCAGCATGACAAGAATAATACAAAAGTTGTGCGTCAAGAGTACAGAGCGGTTTCGCGTTCTTCCAATGAAGAAGTAAAGCGTAATGTGGTCACTTCTGATATTAGGCATGATATGCAGATGGTCTATGCTTCTCCACCAAATATGACTAATGAAATTGTTACAAAGGATCAACATGCCGCTCCAATTCTGACAGTTCATGACGACTCTCCTAGGGTCCAATCTTCTGAAAGAGAATTGGTAGAAATTGCTCAGTTTGCACAAACCGTTATTGAAGAGGCGGCTTTGGATGAAATGGAAACTATTGCCCAGCGAGTAATAGAGGAGCCATTGGAAGCAAATATTGAAGTTGCTAATGCAAGGAAGGATGACTTGAGCTCCTCGGAAACGACTGAACTAGTTCTTGAGGAGCATTTTTCTCCGGAAAATGCAGCAGGTGAGTTGACAAAAGGGAAAACTAGTGGCCATGACTTAACTGAGGAAGACCAATGCACAACTGGTATTGATGGAACCCCTCCTAGGGGGCAATTTGAAATGCAAGCAGTGAATTCTATGATGGGGGATGATACAGGCCTTAAGAATATGACCCTTGTTCTTTCTAAAGGGCAGAAAAAGAGACTCCGCAAACAGCAAAGAGAGGAAAAGCAGCCAGGAGAGGGCACTGTGGATCGTTACCCCGCAAGAAATAGGGGTCCTCCTCATAAGCTTAATTATGAAGATTATTTTTTGGAATATTCGGGGATTAGCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

381

Amino Acids

42.58

Weight (kDa)

6.22

Isoelectric Point (pI)

51.16

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000044)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G07760 AT5G28823
fragaria_vesca FvH4_1g13572 FvH4_2g03281 FvH4_2g04691 FvH4_2g08332 FvH4_2g08333 FvH4_2g15313 FvH4_2g26101 FvH4_2g29541 FvH4_3g06911 FvH4_3g34351 FvH4_3g43733 FvH4_4g02432 FvH4_4g05601 FvH4_4g08213 FvH4_4g09961 FvH4_4g10131 FvH4_4g20001 FvH4_4g20002 FvH4_5g01051 FvH4_5g01401 FvH4_5g27943 FvH4_6g09220 FvH4_6g17383 FvH4_6g35491 FvH4_6g46421 FvH4_7g04151 FvH4_7g13962 FvH4_7g18611 FvH4_7g19491 FvH4_7g19511 FvH4_7g26562
malus_domestica MD06G1221600.v1.1
pyrus_communis pycom10g21150
rosa_chinensis RchiOBHm_Chr1g0337571 RchiOBHm_Chr2g0168771 RchiOBHm_Chr3g0453631 RchiOBHm_Chr6g0278581
rosa_laevigata RLG00000001899 RLG00000001925 RLG00000002026 RLG00000003410 RLG00000003767 RLG00000004304 RLG00000004473 RLG00000004677 RLG00000006856 RLG00000007994 RLG00000009888 RLG00000011627 RLG00000012174 RLG00000012217 RLG00000013118 RLG00000013736 RLG00000014194 RLG00000014251 RLG00000015011 RLG00000015057 RLG00000015235 RLG00000017416 RLG00000018052 RLG00000018537 RLG00000019968 RLG00000020096 RLG00000020263 RLG00000022606 RLG00000023119 RLG00000028111 RLG00000029686 RLG00000030126 RLG00000031124 RLG00000031236 RLG00000032766 RLG00000033171 RLG00000033548 RLG00000033987 RLG00000034062 RLG00000035115 RLG00000035863
rosa_multiflora Rmu_co8036712.1_g000001 Rmu_co8080248.1_g000001 Rmu_co8208334.1_g000001 Rmu_co8253451.1_g000001 Rmu_co8393241.1_g000001 Rmu_co8522225.1_g000005 Rmu_sc0000060.1_g000030 Rmu_sc0000060.1_g000031 Rmu_sc0000060.1_g000032 Rmu_sc0000090.1_g000008 Rmu_sc0000149.1_g000051 Rmu_sc0000149.1_g000058 Rmu_sc0000309.1_g000050 Rmu_sc0000370.1_g000022 Rmu_sc0000370.1_g000023 Rmu_sc0000370.1_g000024 Rmu_sc0000418.1_g000018 Rmu_sc0000427.1_g000014 Rmu_sc0000427.1_g000015 Rmu_sc0000434.1_g000008 Rmu_sc0000487.1_g000038 Rmu_sc0000487.1_g000039 Rmu_sc0000569.1_g000029 Rmu_sc0000580.1_g000097 Rmu_sc0000595.1_g000068 Rmu_sc0000607.1_g000027 Rmu_sc0000738.1_g000004 Rmu_sc0000758.1_g000001 Rmu_sc0000758.1_g000002 Rmu_sc0000870.1_g000019 Rmu_sc0000924.1_g000040 Rmu_sc0000924.1_g000041 Rmu_sc0000999.1_g000037 Rmu_sc0001001.1_g000001 Rmu_sc0001010.1_g000080 Rmu_sc0001075.1_g000041 Rmu_sc0001097.1_g000016 Rmu_sc0001173.1_g000020 Rmu_sc0001258.1_g000010 Rmu_sc0001425.1_g000031 Rmu_sc0001493.1_g000020 Rmu_sc0001493.1_g000021 Rmu_sc0001644.1_g000024 Rmu_sc0001648.1_g000039 Rmu_sc0001662.1_g000002 Rmu_sc0001849.1_g000046 Rmu_sc0001851.1_g000038 Rmu_sc0001861.1_g000006 Rmu_sc0001899.1_g000008 Rmu_sc0002231.1_g000023 Rmu_sc0002393.1_g000012 Rmu_sc0002515.1_g000010 Rmu_sc0002551.1_g000013 Rmu_sc0002680.1_g000029 Rmu_sc0002700.1_g000030 Rmu_sc0002700.1_g000031 Rmu_sc0002709.1_g000035 Rmu_sc0002779.1_g000017 Rmu_sc0003267.1_g000040 Rmu_sc0003306.1_g000009 Rmu_sc0003338.1_g000014 Rmu_sc0003522.1_g000038 Rmu_sc0003522.1_g000039 Rmu_sc0003653.1_g000031 Rmu_sc0003901.1_g000003 Rmu_sc0003920.1_g000009 Rmu_sc0004014.1_g000009 Rmu_sc0004016.1_g000013 Rmu_sc0004031.1_g000002 Rmu_sc0004106.1_g000001 Rmu_sc0004432.1_g000004 Rmu_sc0004481.1_g000020 Rmu_sc0004874.1_g000005 Rmu_sc0004928.1_g000005 Rmu_sc0005065.1_g000053 Rmu_sc0005091.1_g000005 Rmu_sc0005217.1_g000015 Rmu_sc0005242.1_g000002 Rmu_sc0005300.1_g000011 Rmu_sc0005400.1_g000004 Rmu_sc0005486.1_g000007 Rmu_sc0005527.1_g000015 Rmu_sc0006059.1_g000021 Rmu_sc0006087.1_g000004 Rmu_sc0006184.1_g000006 Rmu_sc0006184.1_g000007 Rmu_sc0006578.1_g000006 Rmu_sc0006730.1_g000010 Rmu_sc0006736.1_g000030 Rmu_sc0006736.1_g000033 Rmu_sc0007333.1_g000018 Rmu_sc0007856.1_g000010 Rmu_sc0008231.1_g000003 Rmu_sc0009862.1_g000012 Rmu_sc0010547.1_g000001 Rmu_sc0010547.1_g000003 Rmu_sc0010632.1_g000012 Rmu_sc0010747.1_g000008 Rmu_sc0011075.1_g000009 Rmu_sc0011565.1_g000004 Rmu_sc0011641.1_g000003 Rmu_sc0013102.1_g000013 Rmu_sc0013160.1_g000006 Rmu_sc0014846.1_g000004 Rmu_sc0017037.1_g000003 Rmu_sc0018203.1_g000001 Rmu_sc0018204.1_g000001 Rmu_sc0018348.1_g000001 Rmu_sc0019354.1_g000002 Rmu_sc0021630.1_g000002 Rmu_sc0022987.1_g000002 Rmu_sc0024469.1_g000005 Rmu_sc0033519.1_g000001 Rmu_sc0033519.1_g000002 Rmu_sc0033519.1_g000003 Rmu_sc0042775.1_g000001 Rmu_ssc0000110.1_g000003 Rmu_ssc0000110.1_g000004 Rmu_ssc0000126.1_g000068 Rmu_ssc0000200.1_g000007 Rmu_ssc0000295.1_g000003 Rmu_ssc0000295.1_g000004 Rmu_ssc0000299.1_g000010 Rmu_ssc0000308.1_g000024 Rmu_ssc0000339.1_g000006 Rmu_ssc0000385.1_g000012 Rmu_ssc0000409.1_g000004 Rmu_ssc0000421.1_g000004
rosa_roxburghii Rroxscaffold_156G00440360 Rroxscaffold_166G00440800 Rroxscaffold_1G00039040 Rroxscaffold_1G00039050 Rroxscaffold_1G00073950 Rroxscaffold_2G00091710 Rroxscaffold_2G00120050 Rroxscaffold_2G00122590 Rroxscaffold_3G00219700 Rroxscaffold_3G00264140 Rroxscaffold_4G00290600 Rroxscaffold_4G00323610 Rroxscaffold_4G00328460 Rroxscaffold_5G00343440 Rroxscaffold_5G00343570 Rroxscaffold_5G00378540 Rroxscaffold_5G00385090 Rroxscaffold_7G00169130 Rroxscaffold_7G00216420
rosa_rugosa Rorug01G0065800 Rorug01G0073500 Rorug01G0091700 Rorug01G0096500 Rorug01G0204700.1 Rorug01G0249100 Rorug01G0333800 Rorug01G0333900 Rorug01G0339500 Rorug01G0431300 Rorug02G0085400 Rorug02G0117500 Rorug02G0130900 Rorug02G0178800 Rorug02G0226700 Rorug02G0336300 Rorug02G0338700 Rorug02G0351400 Rorug02G0459900 Rorug03G0187000 Rorug03G0223700 Rorug03G0291300 Rorug03G0291300 Rorug03G0311100 Rorug03G0316900 Rorug03G0346000 Rorug04G0014500 Rorug04G0014600 Rorug04G0124100 Rorug04G0136500 Rorug04G0302000 Rorug04G0338100 Rorug04G0338200 Rorug04G0413100 Rorug05G0182200 Rorug05G0226500 Rorug05G0273300 Rorug05G0292200 Rorug05G0292200 Rorug05G0392500 Rorug05G0394500 Rorug05G0394600 Rorug05G0505600.1 Rorug06G0351400 Rorug06G0393400 Rorug06G0393600 Rorug06G0470000 Rorug07G0063100 Rorug07G0086800 Rorug07G0109200 Rorug07G0236100
rosa_samantha Rh1AG010800 Rh1AG011100 Rh1AG064900 Rh1AG088000 Rh1AG207100 Rh1AG262000 Rh1AG300800 Rh1BG043000 Rh1BG144600 Rh1BG180700 Rh1BG180800 Rh1BG328800 Rh1BG399400 Rh1CG041400 Rh1CG047300 Rh1CG379700 Rh1DG036500 Rh1DG083000 Rh1DG210700 Rh1DG210800 Rh1DG231100 Rh2AG007900 Rh2AG055500 Rh2AG339100 Rh2AG368100 Rh2BG243300 Rh2BG258900 Rh2BG292000 Rh2BG333500 Rh2BG387300 Rh2BG612800 Rh2BG619100 Rh2CG026500 Rh2CG163600 Rh2CG535700 Rh2DG186400 Rh2DG235000 Rh2DG314500 Rh2DG388500 Rh2DG391400 Rh2DG496900 Rh2DG526700 Rh2DG570700 Rh3AG330700 Rh3BG266900 Rh3CG236000 Rh3CG340400 Rh3DG090000 Rh3DG278400 Rh3DG297600 Rh3DG362600 Rh4AG001300 Rh4AG023300 Rh4AG097100 Rh4AG427000 Rh4BG029400 Rh4BG032400 Rh4BG086000 Rh4BG249200 Rh4CG001900 Rh4CG040600 Rh4CG093000 Rh4CG106300 Rh4CG113200 Rh4CG113900 Rh4DG002300 Rh4DG144400 Rh4DG234200 Rh5AG043700 Rh5AG084900 Rh5AG161500 Rh5AG409000 Rh5AG457200 Rh5AG457900 Rh5AG473700 Rh5AG520600 Rh5BG042100 Rh5BG124100 Rh5BG323500 Rh5BG417200 Rh5BG443700 Rh5BG451500 Rh5BG464900 Rh5BG470400 Rh5BG522500 Rh5CG068800 Rh5CG178300 Rh5CG231000 Rh5CG258600 Rh5CG394500 Rh5CG473700 Rh5DG164700 Rh5DG235400 Rh5DG261300 Rh5DG304900 Rh5DG334500 Rh5DG424300 Rh5DG458400 Rh5DG478600 Rh5DG552300 Rh5DG552700 Rh6AG037000 Rh6AG042100 Rh6AG255500 Rh6AG283400 Rh6AG291800 Rh6BG049600 Rh6BG080700 Rh6BG114600 Rh6BG128900 Rh6BG352500 Rh6CG052400 Rh6CG112900 Rh6CG113000 Rh6CG131300 Rh6CG157700 Rh6CG243200 Rh6CG254100 Rh6CG275700 Rh6CG299700 Rh6CG309100 Rh6CG317600 Rh6CG342600 Rh6CG471900 Rh6DG038200 Rh6DG102300 Rh6DG114400 Rh6DG225900 Rh6DG292900 Rh6DG320700 Rh6DG512800 Rh7AG217700 Rh7AG313900 Rh7AG446000 Rh7AG472600 Rh7BG223100 Rh7BG349900 Rh7BG352000 Rh7CG160200 Rh7CG233900 Rh7CG242700 Rh7CG273900 Rh7CG306400 Rh7CG322200 Rh7DG053800 Rh7DG077800 Rh7DG227700 Rh7DG404800
rosa_wichuraiana Rw0G003990 Rw2G022110 Rw2G024890 Rw6G005700 Rw7G008770

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 821
Acc36I ACCTGC 1 cut(s) 821
AccB7I CCANNNNNTGG 1 cut(s) 89
AccBSI CCGCTC 2 cut(s) 446, 578
AccII CGCG 1 cut(s) 454
AccIII TCCGGA 1 cut(s) 817
AciI CCGC 7 cut(s) 333, 358, 446, 576, 677, 1018, 1074
AclWI GGATC 2 cut(s) 573, 1071
AcoI YGGCCR 1 cut(s) 859
AcsI RAATTY 2 cut(s) 245, 943
AcuI CTGAAG 1 cut(s) 30
AdeI CACNNNGTG 1 cut(s) 352
AfaI GTAC 2 cut(s) 301, 440
AfiI CCNNNNNNNGG 6 cut(s) 89, 228, 915, 916, 917, 1052
AflII CTTAAG 1 cut(s) 971
AgsI TTSAA 4 cut(s) 144, 671, 743, 929
AhlI ACTAGT 2 cut(s) 793, 854
AjnI CCWGG 1 cut(s) 1045
AluBI AGCT 6 cut(s) 70, 140, 311, 774, 1102, 1143
AluI AGCT 6 cut(s) 70, 140, 311, 774, 1102, 1143
Alw21I GWGCWC 3 cut(s) 72, 313, 776
Alw26I GTCTC 1 cut(s) 1006
AlwI GGATC 2 cut(s) 573, 1071
AlwNI CAGNNNCTG 1 cut(s) 59
Ama87I CYCGRG 1 cut(s) 135
Aor13HI TCCGGA 1 cut(s) 817
AoxI GGCC 5 cut(s) 3, 204, 355, 859, 967
ApeKI GCWGC 3 cut(s) 360, 827, 1042
ApoI RAATTY 2 cut(s) 245, 943
Asp700I GAANNNNTTC 1 cut(s) 795
AspA2I CCTAGG 2 cut(s) 608, 914
AspS9I GGNCC 4 cut(s) 219, 355, 613, 1088
AsuHPI GGTGA 2 cut(s) 232, 845
AvaI CYCGRG 1 cut(s) 135
AvaII GGWCC 3 cut(s) 219, 613, 1088
AvrII CCTAGG 2 cut(s) 608, 914
BaeGI GKGCMC 1 cut(s) 1058
BalI TGGCCA 1 cut(s) 861
BanII GRGCYC 3 cut(s) 72, 313, 776
BbsI GAAGAC 1 cut(s) 885
Bbv12I GWGCWC 3 cut(s) 72, 313, 776
BbvI GCAGC 3 cut(s) 347, 839, 1054
BccI CCATC 5 cut(s) 89, 269, 511, 896, 946
BciT130I CCWGG 1 cut(s) 1047
BcoDI GTCTC 1 cut(s) 1006
BcuI ACTAGT 2 cut(s) 793, 854
BfaI CTAG 4 cut(s) 609, 794, 855, 915
BfmI CTRYAG 1 cut(s) 361
BfrI CTTAAG 1 cut(s) 971
BfuAI ACCTGC 1 cut(s) 821
BisI GCNGC 6 cut(s) 358, 361, 576, 678, 828, 1043
BlnI CCTAGG 2 cut(s) 608, 914
BlsI GCNGC 6 cut(s) 359, 362, 577, 679, 829, 1044
Bme1390I CCNGG 1 cut(s) 1047
Bme18I GGWCC 3 cut(s) 219, 613, 1088
BmeT110I CYCGRG 1 cut(s) 135
BmgT120I GGNCC 4 cut(s) 219, 355, 613, 1088
BmiI GGNNCC 5 cut(s) 384, 614, 723, 907, 1089
BmrFI CCNGG 1 cut(s) 1047
BpiI GAAGAC 1 cut(s) 885
BpmI CTGGAG 2 cut(s) 111, 284
BpuEI CTTGAG 2 cut(s) 790, 821
BsaJI CCNNGG 4 cut(s) 351, 608, 777, 914
BsaWI WCCGGW 1 cut(s) 817
BsaXI ACNNNNNCTCC 2 cut(s) 758, 788
Bsc4I CCNNNNNNNGG 6 cut(s) 89, 228, 915, 916, 917, 1052
Bse1I ACTGG 4 cut(s) 36, 64, 267, 898
Bse3DI GCAATG 2 cut(s) 70, 328
BseAI TCCGGA 1 cut(s) 817
BseBI CCWGG 1 cut(s) 1047
BseDI CCNNGG 4 cut(s) 351, 608, 777, 914
BseGI GGATG 4 cut(s) 280, 691, 769, 964
BseLI CCNNNNNNNGG 6 cut(s) 89, 228, 915, 916, 917, 1052
BseMI GCAATG 2 cut(s) 70, 328
BseMII CTCAG 3 cut(s) 326, 662, 864
BseNI ACTGG 4 cut(s) 36, 64, 267, 898
BseRI GAGGAG 4 cut(s) 734, 766, 818, 1083
BseSI GKGCMC 1 cut(s) 1058
BseXI GCAGC 3 cut(s) 347, 839, 1054
BseYI CCCAGC 2 cut(s) 399, 705
Bsh1236I CGCG 1 cut(s) 454
BshFI GGCC 5 cut(s) 5, 206, 357, 861, 969
BsiHKAI GWGCWC 3 cut(s) 72, 313, 776
BsiHKCI CYCGRG 1 cut(s) 135
BsiSI CCGG 1 cut(s) 818
BslI CCNNNNNNNGG 6 cut(s) 89, 228, 915, 916, 917, 1052
BsmAI GTCTC 1 cut(s) 1006
BsnI GGCC 5 cut(s) 5, 206, 357, 861, 969
BsoBI CYCGRG 1 cut(s) 135
Bsp1286I GDGCHC 4 cut(s) 72, 313, 776, 1058
Bsp13I TCCGGA 1 cut(s) 817
Bsp143I GATC 2 cut(s) 565, 1063
BspACI CCGC 7 cut(s) 333, 358, 446, 576, 677, 1018, 1074
BspANI GGCC 5 cut(s) 5, 206, 357, 861, 969
BspCNI CTCAG 3 cut(s) 325, 661, 865
BspEI TCCGGA 1 cut(s) 817
BspFNI CGCG 1 cut(s) 454
BspHI TCATGA 1 cut(s) 595
BspLI GGNNCC 5 cut(s) 384, 614, 723, 907, 1089
BspMAI CTGCAG 1 cut(s) 365
BspMI ACCTGC 1 cut(s) 821
BspPI GGATC 2 cut(s) 573, 1071
BspTI CTTAAG 1 cut(s) 971
BsrBI CCGCTC 2 cut(s) 446, 578
BsrDI GCAATG 2 cut(s) 70, 328
BsrI ACTGG 4 cut(s) 36, 64, 267, 898
BssECI CCNNGG 4 cut(s) 351, 608, 777, 914
BssMI GATC 2 cut(s) 565, 1063
BssT1I CCWWGG 2 cut(s) 608, 914
Bst2UI CCWGG 1 cut(s) 1047
Bst4CI ACNGT 3 cut(s) 592, 664, 1060
Bst6I CTCTTC 1 cut(s) 666
BstAFI CTTAAG 1 cut(s) 971
BstAPI GCANNNNNTGC 1 cut(s) 511
BstC8I GCNNGC 2 cut(s) 174, 936
BstDEI CTNAG 4 cut(s) 312, 387, 648, 873
BstDSI CCRYGG 1 cut(s) 351
BstF5I GGATG 4 cut(s) 280, 691, 769, 964
BstFNI CGCG 1 cut(s) 454
BstKTI GATC 2 cut(s) 568, 1066
BstMAI GTCTC 1 cut(s) 1006
BstMBI GATC 2 cut(s) 565, 1063
BstMWI GCNNNNNNNGC 3 cut(s) 137, 511, 653
BstNI CCWGG 1 cut(s) 1047
BstNSI RCATGY 1 cut(s) 575
BstSCI CCNGG 1 cut(s) 1045
BstSFI CTRYAG 1 cut(s) 361
BstSLI GKGCMC 1 cut(s) 1058
BstUI CGCG 1 cut(s) 454
BstV1I GCAGC 3 cut(s) 347, 839, 1054
BstV2I GAAGAC 1 cut(s) 885
BsuRI GGCC 5 cut(s) 5, 206, 357, 861, 969
BtgI CCRYGG 1 cut(s) 351
BtsCI GGATG 4 cut(s) 280, 691, 769, 964
BtsI GCAGTG 1 cut(s) 945
BtsIMutI CAGTG 2 cut(s) 945, 1056
BveI ACCTGC 1 cut(s) 821
Cac8I GCNNGC 2 cut(s) 174, 936
CaiI CAGNNNCTG 1 cut(s) 59
CciI TCATGA 1 cut(s) 595
Cfr13I GGNCC 4 cut(s) 219, 355, 613, 1088
CseI GACGC 1 cut(s) 419
Csp6I GTAC 2 cut(s) 300, 439
CviAII CATG 7 cut(s) 73, 181, 404, 506, 572, 596, 863
CviQI GTAC 2 cut(s) 300, 439
DdeI CTNAG 4 cut(s) 312, 387, 648, 873
DpnI GATC 2 cut(s) 567, 1065
DpnII GATC 2 cut(s) 565, 1063
DraIII CACNNNGTG 1 cut(s) 352
EaeI YGGCCR 1 cut(s) 859
Eam1104I CTCTTC 1 cut(s) 666
EarI CTCTTC 1 cut(s) 666
Ecl136II GAGCTC 3 cut(s) 70, 311, 774
Eco130I CCWWGG 2 cut(s) 608, 914
Eco147I AGGCCT 1 cut(s) 969
Eco24I GRGCYC 3 cut(s) 72, 313, 776
Eco47I GGWCC 3 cut(s) 219, 613, 1088
Eco53kI GAGCTC 3 cut(s) 70, 311, 774
Eco57I CTGAAG 1 cut(s) 30
Eco88I CYCGRG 1 cut(s) 135
EcoICRI GAGCTC 3 cut(s) 70, 311, 774
EcoO109I RGGNCCY 1 cut(s) 1088
EcoRI GAATTC 1 cut(s) 943
EcoRII CCWGG 1 cut(s) 1045
EcoT14I CCWWGG 2 cut(s) 608, 914
EcoT38I GRGCYC 3 cut(s) 72, 313, 776
ErhI CCWWGG 2 cut(s) 608, 914
FaeI CATG 7 cut(s) 76, 184, 407, 509, 575, 599, 866
FalI AAGNNNNNCTT 2 cut(s) 752, 784
FatI CATG 7 cut(s) 72, 180, 403, 505, 571, 595, 862
FauI CCCGC 2 cut(s) 326, 1081
Fnu4HI GCNGC 6 cut(s) 358, 361, 576, 678, 828, 1043
FokI GGATG 4 cut(s) 287, 698, 776, 971
FriOI GRGCYC 3 cut(s) 72, 313, 776
Fsp4HI GCNGC 6 cut(s) 358, 361, 576, 678, 828, 1043
FspBI CTAG 4 cut(s) 609, 794, 855, 915
GluI GCNGC 6 cut(s) 358, 361, 576, 678, 828, 1043
GsaI CCCAGC 2 cut(s) 403, 709
GsuI CTGGAG 2 cut(s) 111, 284
HaeIII GGCC 5 cut(s) 5, 206, 357, 861, 969
HapII CCGG 1 cut(s) 818
HgaI GACGC 1 cut(s) 419
Hin1II CATG 7 cut(s) 76, 184, 407, 509, 575, 599, 866
HincII GTYRAC 2 cut(s) 101, 840
HindII GTYRAC 2 cut(s) 101, 840
HindIII AAGCTT 1 cut(s) 1100
HinfI GANTC 5 cut(s) 20, 106, 391, 602, 1014
HpaII CCGG 1 cut(s) 818
HphI GGTGA 2 cut(s) 232, 845
Hpy166II GTNNAC 3 cut(s) 101, 326, 840
Hpy188I TCNGA 7 cut(s) 10, 19, 223, 496, 588, 625, 781
Hpy188III TCNNGA 5 cut(s) 24, 434, 596, 800, 818
Hpy8I GTNNAC 3 cut(s) 101, 326, 840
HpyAV CCTTC 5 cut(s) 5, 132, 196, 205, 754
HpyCH4III ACNGT 3 cut(s) 592, 664, 1060
HpyCH4V TGCA 8 cut(s) 363, 373, 514, 656, 755, 827, 888, 934
HpyF10VI GCNNNNNNNGC 3 cut(s) 137, 511, 653
HpyF3I CTNAG 4 cut(s) 312, 387, 648, 873
Hsp92II CATG 7 cut(s) 76, 184, 407, 509, 575, 599, 866
Kpn2I TCCGGA 1 cut(s) 817
Kzo9I GATC 2 cut(s) 565, 1063
LmnI GCTCC 7 cut(s) 232, 382, 401, 583, 721, 779, 805
Lsp1109I GCAGC 3 cut(s) 347, 839, 1054
MaeI CTAG 4 cut(s) 609, 794, 855, 915
MaeIII GTNAC 6 cut(s) 38, 55, 344, 487, 556, 1067
MalI GATC 2 cut(s) 567, 1065
MbiI CCGCTC 2 cut(s) 446, 578
MboI GATC 2 cut(s) 565, 1063
MboII GAAGA 8 cut(s) 169, 172, 450, 479, 612, 683, 890, 1124
MhlI GDGCHC 4 cut(s) 72, 313, 776, 1058
MlsI TGGCCA 1 cut(s) 861
MluCI AATT 9 cut(s) 49, 245, 552, 582, 632, 642, 923, 943, 1105
MluNI TGGCCA 1 cut(s) 861
MlyI GAGTC 3 cut(s) 385, 596, 1008
Mox20I TGGCCA 1 cut(s) 861
MroI TCCGGA 1 cut(s) 817
MroXI GAANNNNTTC 1 cut(s) 795
MscI TGGCCA 1 cut(s) 861
MseI TTAA 3 cut(s) 869, 972, 1104
Msp20I TGGCCA 1 cut(s) 861
MspA1I CMGCKG 1 cut(s) 360
MspCI CTTAAG 1 cut(s) 971
MspI CCGG 1 cut(s) 818
MspR9I CCNGG 1 cut(s) 1047
MvaI CCWGG 1 cut(s) 1047
MvnI CGCG 1 cut(s) 454
MwoI GCNNNNNNNGC 3 cut(s) 137, 511, 653
NdeII GATC 2 cut(s) 565, 1063
NlaIII CATG 7 cut(s) 76, 184, 407, 509, 575, 599, 866
NlaIV GGNNCC 5 cut(s) 384, 614, 723, 907, 1089
NmuCI GTSAC 3 cut(s) 38, 344, 487
NspI RCATGY 1 cut(s) 575
PaeR7I CTCGAG 1 cut(s) 135
PagI TCATGA 1 cut(s) 595
PaqCI CACCTGC 1 cut(s) 821
PceI AGGCCT 1 cut(s) 969
PdmI GAANNNNTTC 1 cut(s) 795
PfeI GAWTC 2 cut(s) 20, 106
PflMI CCANNNNNTGG 1 cut(s) 89
PkrI GCNGC 6 cut(s) 359, 362, 577, 679, 829, 1044
PleI GAGTC 3 cut(s) 385, 596, 1008
PpsI GAGTC 3 cut(s) 385, 596, 1008
PpuMI RGGWCCY 1 cut(s) 1088
Psp124BI GAGCTC 3 cut(s) 72, 313, 776
Psp5II RGGWCCY 1 cut(s) 1088
Psp6I CCWGG 1 cut(s) 1045
PspFI CCCAGC 2 cut(s) 399, 705
PspGI CCWGG 1 cut(s) 1045
PspN4I GGNNCC 5 cut(s) 384, 614, 723, 907, 1089
PspPI GGNCC 4 cut(s) 219, 355, 613, 1088
PspPPI RGGWCCY 1 cut(s) 1088
PspXI VCTCGAGB 1 cut(s) 135
PstI CTGCAG 1 cut(s) 365
PstNI CAGNNNCTG 1 cut(s) 59
RsaI GTAC 2 cut(s) 301, 440
RsaNI GTAC 2 cut(s) 300, 439
SacI GAGCTC 3 cut(s) 72, 313, 776
SaqAI TTAA 3 cut(s) 869, 972, 1104
SatI GCNGC 6 cut(s) 358, 361, 576, 678, 828, 1043
Sau3AI GATC 2 cut(s) 565, 1063
Sau96I GGNCC 4 cut(s) 219, 355, 613, 1088
SchI GAGTC 3 cut(s) 385, 596, 1008
ScrFI CCNGG 1 cut(s) 1047
SduI GDGCHC 4 cut(s) 72, 313, 776, 1058
SetI ASST 9 cut(s) 72, 142, 221, 270, 313, 776, 835, 1104, 1145
SfcI CTRYAG 1 cut(s) 361
Sfr274I CTCGAG 1 cut(s) 135
SinI GGWCC 3 cut(s) 219, 613, 1088
SlaI CTCGAG 1 cut(s) 135
SmlI CTYRAG 4 cut(s) 135, 769, 800, 971
SmoI CTYRAG 4 cut(s) 135, 769, 800, 971
SpeI ACTAGT 2 cut(s) 793, 854
Sse9I AATT 9 cut(s) 49, 245, 552, 582, 632, 642, 923, 943, 1105
SseBI AGGCCT 1 cut(s) 969
SsiI CCGC 7 cut(s) 333, 358, 446, 576, 677, 1018, 1074
SspI AATATT 2 cut(s) 739, 1130
SspMI CTAG 4 cut(s) 609, 794, 855, 915
SstI GAGCTC 3 cut(s) 72, 313, 776
StuI AGGCCT 1 cut(s) 969
StyD4I CCNGG 1 cut(s) 1045
StyI CCWWGG 2 cut(s) 608, 914
TaaI ACNGT 3 cut(s) 592, 664, 1060
TaqI TCGA 2 cut(s) 136, 249
TasI AATT 9 cut(s) 49, 245, 552, 582, 632, 642, 923, 943, 1105
TatI WGTACW 2 cut(s) 299, 438
TauI GCSGC 3 cut(s) 360, 578, 680
TfiI GAWTC 2 cut(s) 20, 106
Tru1I TTAA 3 cut(s) 869, 972, 1104
Tru9I TTAA 3 cut(s) 869, 972, 1104
TscAI CASTG 2 cut(s) 945, 1063
TseFI GTSAC 3 cut(s) 38, 344, 487
TseI GCWGC 3 cut(s) 360, 827, 1042
Tsp45I GTSAC 3 cut(s) 38, 344, 487
TspDTI ATGAA 6 cut(s) 197, 480, 564, 584, 702, 1125
TspGWI ACGGA 1 cut(s) 340
TspRI CASTG 2 cut(s) 945, 1063
Van91I CCANNNNNTGG 1 cut(s) 89
Vha464I CTTAAG 1 cut(s) 971
VpaK11BI GGWCC 3 cut(s) 219, 613, 1088
XapI RAATTY 2 cut(s) 245, 943
XceI RCATGY 1 cut(s) 575
XcmI CCANNNNNNNNNTGG 1 cut(s) 890
XhoI CTCGAG 1 cut(s) 135
XmaJI CCTAGG 2 cut(s) 608, 914
XmnI GAANNNNTTC 1 cut(s) 795
XspI CTAG 4 cut(s) 609, 794, 855, 915
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.