Domain of unknown function (DUF4283)
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| zf-CCHC_4 | PF14392 | 112 - 158 | 1e-07 | Zinc knuckle |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 663 |
| AbsI | CCTCGAGG | 1 cut(s) | 746 |
| AccB1I | GGYRCC | 1 cut(s) | 97 |
| AccII | CGCG | 2 cut(s) | 156, 664 |
| AciI | CCGC | 5 cut(s) | 156, 203, 343, 571, 662 |
| AclI | AACGTT | 2 cut(s) | 769, 923 |
| AclWI | GGATC | 1 cut(s) | 279 |
| AcsI | RAATTY | 2 cut(s) | 790, 836 |
| AcuI | CTGAAG | 2 cut(s) | 227, 582 |
| AcyI | GRCGYC | 1 cut(s) | 98 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 534, 535, 631, 668, 698 |
| AgsI | TTSAA | 4 cut(s) | 79, 110, 223, 317 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 412 |
| AjiI | CACGTC | 1 cut(s) | 808 |
| AjnI | CCWGG | 1 cut(s) | 371 |
| AleI | CACNNNNGTG | 1 cut(s) | 845 |
| AluBI | AGCT | 4 cut(s) | 91, 587, 874, 935 |
| AluI | AGCT | 4 cut(s) | 91, 587, 874, 935 |
| Alw26I | GTCTC | 4 cut(s) | 127, 420, 674, 856 |
| AlwI | GGATC | 1 cut(s) | 279 |
| Ama87I | CYCGRG | 1 cut(s) | 746 |
| AoxI | GGCC | 3 cut(s) | 29, 260, 344 |
| ApeKI | GCWGC | 3 cut(s) | 7, 340, 763 |
| ApoI | RAATTY | 2 cut(s) | 790, 836 |
| AspLEI | GCGC | 2 cut(s) | 100, 156 |
| AspS9I | GGNCC | 4 cut(s) | 30, 117, 345, 525 |
| AsuC2I | CCSGG | 1 cut(s) | 530 |
| AsuHPI | GGTGA | 4 cut(s) | 11, 379, 653, 898 |
| AvaI | CYCGRG | 1 cut(s) | 746 |
| AvaII | GGWCC | 2 cut(s) | 117, 525 |
| AxyI | CCTNAGG | 1 cut(s) | 693 |
| BanI | GGYRCC | 1 cut(s) | 97 |
| BbsI | GAAGAC | 1 cut(s) | 230 |
| BbvI | GCAGC | 3 cut(s) | 19, 352, 775 |
| BceAI | ACGGC | 1 cut(s) | 130 |
| BciT130I | CCWGG | 1 cut(s) | 373 |
| BcnI | CCSGG | 1 cut(s) | 530 |
| BcoDI | GTCTC | 4 cut(s) | 127, 420, 674, 856 |
| BfaI | CTAG | 2 cut(s) | 182, 720 |
| BfoI | RGCGCY | 1 cut(s) | 101 |
| BisI | GCNGC | 7 cut(s) | 8, 157, 203, 341, 344, 662, 764 |
| BlsI | GCNGC | 7 cut(s) | 9, 158, 204, 342, 345, 663, 765 |
| Bme1390I | CCNGG | 2 cut(s) | 373, 530 |
| Bme18I | GGWCC | 2 cut(s) | 117, 525 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 412 |
| BmeT110I | CYCGRG | 1 cut(s) | 746 |
| BmgBI | CACGTC | 1 cut(s) | 808 |
| BmgT120I | GGNCC | 4 cut(s) | 30, 117, 345, 525 |
| BmiI | GGNNCC | 6 cut(s) | 99, 118, 144, 347, 489, 527 |
| BmrFI | CCNGG | 2 cut(s) | 373, 530 |
| BmsI | GCATC | 2 cut(s) | 158, 637 |
| BpiI | GAAGAC | 1 cut(s) | 230 |
| BpmI | CTGGAG | 1 cut(s) | 720 |
| BpuMI | CCSGG | 1 cut(s) | 530 |
| BsaHI | GRCGYC | 1 cut(s) | 98 |
| BsaI | GGTCTC | 1 cut(s) | 856 |
| BsaJI | CCNNGG | 2 cut(s) | 372, 528 |
| BsaWI | WCCGGW | 1 cut(s) | 844 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 131, 161 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 534, 535, 631, 668, 698 |
| Bse1I | ACTGG | 2 cut(s) | 281, 737 |
| Bse21I | CCTNAGG | 1 cut(s) | 693 |
| BseBI | CCWGG | 1 cut(s) | 373 |
| BseDI | CCNNGG | 2 cut(s) | 372, 528 |
| BseGI | GGATG | 1 cut(s) | 784 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 534, 535, 631, 668, 698 |
| BseMII | CTCAG | 2 cut(s) | 57, 684 |
| BseNI | ACTGG | 2 cut(s) | 281, 737 |
| BseRI | GAGGAG | 1 cut(s) | 155 |
| BseXI | GCAGC | 3 cut(s) | 19, 352, 775 |
| BseYI | CCCAGC | 1 cut(s) | 63 |
| BsgI | GTGCAG | 1 cut(s) | 149 |
| Bsh1236I | CGCG | 2 cut(s) | 156, 664 |
| BshFI | GGCC | 3 cut(s) | 31, 262, 346 |
| BshNI | GGYRCC | 1 cut(s) | 97 |
| BsiHKCI | CYCGRG | 1 cut(s) | 746 |
| BsiSI | CCGG | 4 cut(s) | 95, 491, 530, 845 |
| BslFI | GGGAC | 3 cut(s) | 465, 511, 669 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 534, 535, 631, 668, 698 |
| BsmAI | GTCTC | 4 cut(s) | 127, 420, 674, 856 |
| BsmBI | CGTCTC | 1 cut(s) | 127 |
| BsmFI | GGGAC | 3 cut(s) | 465, 511, 669 |
| BsnI | GGCC | 3 cut(s) | 31, 262, 346 |
| Bso31I | GGTCTC | 1 cut(s) | 856 |
| BsoBI | CYCGRG | 1 cut(s) | 746 |
| Bsp143I | GATC | 3 cut(s) | 232, 271, 601 |
| BspACI | CCGC | 5 cut(s) | 156, 203, 343, 571, 662 |
| BspANI | GGCC | 3 cut(s) | 31, 262, 346 |
| BspCNI | CTCAG | 2 cut(s) | 56, 685 |
| BspFNI | CGCG | 2 cut(s) | 156, 664 |
| BspLI | GGNNCC | 6 cut(s) | 99, 118, 144, 347, 489, 527 |
| BspPI | GGATC | 1 cut(s) | 279 |
| BspT107I | GGYRCC | 1 cut(s) | 97 |
| BspTNI | GGTCTC | 1 cut(s) | 856 |
| BsrI | ACTGG | 2 cut(s) | 281, 737 |
| BssECI | CCNNGG | 2 cut(s) | 372, 528 |
| BssMI | GATC | 3 cut(s) | 232, 271, 601 |
| BssNI | GRCGYC | 1 cut(s) | 98 |
| Bst2UI | CCWGG | 1 cut(s) | 373 |
| Bst4CI | ACNGT | 1 cut(s) | 631 |
| Bst6I | CTCTTC | 2 cut(s) | 292, 884 |
| BstACI | GRCGYC | 1 cut(s) | 98 |
| BstC8I | GCNNGC | 3 cut(s) | 264, 558, 589 |
| BstDEI | CTNAG | 7 cut(s) | 43, 55, 248, 435, 457, 693, 900 |
| BstEII | GGTNACC | 1 cut(s) | 367 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 696 |
| BstF5I | GGATG | 1 cut(s) | 784 |
| BstFNI | CGCG | 2 cut(s) | 156, 664 |
| BstH2I | RGCGCY | 1 cut(s) | 101 |
| BstHHI | GCGC | 2 cut(s) | 100, 156 |
| BstKTI | GATC | 3 cut(s) | 235, 274, 604 |
| BstMAI | GTCTC | 4 cut(s) | 127, 420, 674, 856 |
| BstMBI | GATC | 3 cut(s) | 232, 271, 601 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 97, 151, 593 |
| BstNI | CCWGG | 1 cut(s) | 373 |
| BstNSI | RCATGY | 1 cut(s) | 340 |
| BstPI | GGTNACC | 1 cut(s) | 367 |
| BstSCI | CCNGG | 2 cut(s) | 371, 528 |
| BstUI | CGCG | 2 cut(s) | 156, 664 |
| BstV1I | GCAGC | 3 cut(s) | 19, 352, 775 |
| BstV2I | GAAGAC | 1 cut(s) | 230 |
| Bsu36I | CCTNAGG | 1 cut(s) | 693 |
| BsuRI | GGCC | 3 cut(s) | 31, 262, 346 |
| BtgZI | GCGATG | 1 cut(s) | 181 |
| BtrI | CACGTC | 1 cut(s) | 808 |
| BtsCI | GGATG | 1 cut(s) | 784 |
| BtsI | GCAGTG | 1 cut(s) | 501 |
| BtsIMutI | CAGTG | 3 cut(s) | 274, 501, 617 |
| Cac8I | GCNNGC | 3 cut(s) | 264, 558, 589 |
| CfoI | GCGC | 2 cut(s) | 100, 156 |
| Cfr13I | GGNCC | 4 cut(s) | 30, 117, 345, 525 |
| CseI | GACGC | 3 cut(s) | 13, 235, 653 |
| CviAII | CATG | 3 cut(s) | 230, 310, 337 |
| DdeI | CTNAG | 7 cut(s) | 43, 55, 248, 435, 457, 693, 900 |
| DinI | GGCGCC | 1 cut(s) | 99 |
| DpnI | GATC | 3 cut(s) | 234, 273, 603 |
| DpnII | GATC | 3 cut(s) | 232, 271, 601 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 663 |
| DriI | GACNNNNNGTC | 1 cut(s) | 412 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 663 |
| Eam1104I | CTCTTC | 2 cut(s) | 292, 884 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 412 |
| EarI | CTCTTC | 2 cut(s) | 292, 884 |
| Eco31I | GGTCTC | 1 cut(s) | 856 |
| Eco47I | GGWCC | 2 cut(s) | 117, 525 |
| Eco57I | CTGAAG | 2 cut(s) | 227, 582 |
| Eco81I | CCTNAGG | 1 cut(s) | 693 |
| Eco88I | CYCGRG | 1 cut(s) | 746 |
| Eco91I | GGTNACC | 1 cut(s) | 367 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 696 |
| EcoO109I | RGGNCCY | 2 cut(s) | 30, 525 |
| EcoO65I | GGTNACC | 1 cut(s) | 367 |
| EcoRI | GAATTC | 2 cut(s) | 790, 836 |
| EcoRII | CCWGG | 1 cut(s) | 371 |
| EgeI | GGCGCC | 1 cut(s) | 99 |
| EheI | GGCGCC | 1 cut(s) | 99 |
| Esp3I | CGTCTC | 1 cut(s) | 127 |
| FaeI | CATG | 3 cut(s) | 233, 313, 340 |
| FaiI | YATR | 7 cut(s) | 231, 311, 338, 612, 653, 803, 960 |
| FaqI | GGGAC | 3 cut(s) | 465, 511, 669 |
| FatI | CATG | 3 cut(s) | 229, 309, 336 |
| Fnu4HI | GCNGC | 7 cut(s) | 8, 157, 203, 341, 344, 662, 764 |
| FokI | GGATG | 1 cut(s) | 791 |
| Fsp4HI | GCNGC | 7 cut(s) | 8, 157, 203, 341, 344, 662, 764 |
| FspBI | CTAG | 2 cut(s) | 182, 720 |
| GlaI | GCGC | 2 cut(s) | 99, 155 |
| GluI | GCNGC | 7 cut(s) | 8, 157, 203, 341, 344, 662, 764 |
| GsaI | CCCAGC | 1 cut(s) | 67 |
| GsuI | CTGGAG | 1 cut(s) | 720 |
| HaeII | RGCGCY | 1 cut(s) | 101 |
| HaeIII | GGCC | 3 cut(s) | 31, 262, 346 |
| HapII | CCGG | 4 cut(s) | 95, 491, 530, 845 |
| HgaI | GACGC | 3 cut(s) | 13, 235, 653 |
| HhaI | GCGC | 2 cut(s) | 100, 156 |
| Hin1I | GRCGYC | 1 cut(s) | 98 |
| Hin1II | CATG | 3 cut(s) | 233, 313, 340 |
| Hin6I | GCGC | 2 cut(s) | 98, 154 |
| HinP1I | GCGC | 2 cut(s) | 98, 154 |
| HincII | GTYRAC | 1 cut(s) | 406 |
| HindII | GTYRAC | 1 cut(s) | 406 |
| HinfI | GANTC | 3 cut(s) | 59, 413, 713 |
| HpaII | CCGG | 4 cut(s) | 95, 491, 530, 845 |
| HphI | GGTGA | 4 cut(s) | 11, 379, 653, 898 |
| Hpy166II | GTNNAC | 3 cut(s) | 406, 799, 917 |
| Hpy188I | TCNGA | 3 cut(s) | 601, 679, 909 |
| Hpy188III | TCNNGA | 3 cut(s) | 322, 546, 787 |
| Hpy8I | GTNNAC | 3 cut(s) | 406, 799, 917 |
| Hpy99I | CGWCG | 1 cut(s) | 570 |
| HpyAV | CCTTC | 4 cut(s) | 33, 183, 362, 824 |
| HpyCH4III | ACNGT | 1 cut(s) | 631 |
| HpyCH4IV | ACGT | 3 cut(s) | 769, 807, 923 |
| HpyCH4V | TGCA | 5 cut(s) | 130, 171, 340, 763, 943 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 97, 151, 593 |
| HpyF3I | CTNAG | 7 cut(s) | 43, 55, 248, 435, 457, 693, 900 |
| HpySE526I | ACGT | 3 cut(s) | 769, 807, 923 |
| Hsp92I | GRCGYC | 1 cut(s) | 98 |
| Hsp92II | CATG | 3 cut(s) | 233, 313, 340 |
| HspAI | GCGC | 2 cut(s) | 98, 154 |
| KasI | GGCGCC | 1 cut(s) | 97 |
| Kzo9I | GATC | 3 cut(s) | 232, 271, 601 |
| LmnI | GCTCC | 4 cut(s) | 142, 163, 584, 950 |
| Lsp1109I | GCAGC | 3 cut(s) | 19, 352, 775 |
| LweI | GCATC | 2 cut(s) | 158, 637 |
| MaeI | CTAG | 2 cut(s) | 182, 720 |
| MaeII | ACGT | 3 cut(s) | 769, 807, 923 |
| MaeIII | GTNAC | 5 cut(s) | 46, 240, 367, 784, 808 |
| MalI | GATC | 3 cut(s) | 234, 273, 603 |
| MboI | GATC | 3 cut(s) | 232, 271, 601 |
| MboII | GAAGA | 6 cut(s) | 235, 298, 309, 385, 839, 901 |
| MluCI | AATT | 3 cut(s) | 317, 790, 836 |
| Mly113I | GGCGCC | 1 cut(s) | 98 |
| MlyI | GAGTC | 2 cut(s) | 422, 722 |
| MmeI | TCCRAC | 1 cut(s) | 906 |
| MslI | CAYNNNNRTG | 4 cut(s) | 459, 609, 806, 845 |
| MspA1I | CMGCKG | 2 cut(s) | 205, 343 |
| MspI | CCGG | 4 cut(s) | 95, 491, 530, 845 |
| MspR9I | CCNGG | 2 cut(s) | 373, 530 |
| MvaI | CCWGG | 1 cut(s) | 373 |
| MvnI | CGCG | 2 cut(s) | 156, 664 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 97, 151, 593 |
| NarI | GGCGCC | 1 cut(s) | 98 |
| NciI | CCSGG | 1 cut(s) | 530 |
| NdeII | GATC | 3 cut(s) | 232, 271, 601 |
| NlaIII | CATG | 3 cut(s) | 233, 313, 340 |
| NlaIV | GGNNCC | 6 cut(s) | 99, 118, 144, 347, 489, 527 |
| NmuCI | GTSAC | 4 cut(s) | 240, 367, 784, 808 |
| NspI | RCATGY | 1 cut(s) | 340 |
| OliI | CACNNNNGTG | 1 cut(s) | 845 |
| PaeR7I | CTCGAG | 1 cut(s) | 746 |
| PfeI | GAWTC | 1 cut(s) | 59 |
| PkrI | GCNGC | 7 cut(s) | 9, 158, 204, 342, 345, 663, 765 |
| PleI | GAGTC | 2 cut(s) | 421, 721 |
| PluTI | GGCGCC | 1 cut(s) | 101 |
| PpsI | GAGTC | 2 cut(s) | 421, 721 |
| PpuMI | RGGWCCY | 1 cut(s) | 525 |
| Psp1406I | AACGTT | 2 cut(s) | 769, 923 |
| Psp5II | RGGWCCY | 1 cut(s) | 525 |
| Psp6I | CCWGG | 1 cut(s) | 371 |
| PspEI | GGTNACC | 1 cut(s) | 367 |
| PspFI | CCCAGC | 1 cut(s) | 63 |
| PspGI | CCWGG | 1 cut(s) | 371 |
| PspN4I | GGNNCC | 6 cut(s) | 99, 118, 144, 347, 489, 527 |
| PspPI | GGNCC | 4 cut(s) | 30, 117, 345, 525 |
| PspPPI | RGGWCCY | 1 cut(s) | 525 |
| PspXI | VCTCGAGB | 1 cut(s) | 746 |
| RseI | CAYNNNNRTG | 4 cut(s) | 459, 609, 806, 845 |
| SatI | GCNGC | 7 cut(s) | 8, 157, 203, 341, 344, 662, 764 |
| Sau3AI | GATC | 3 cut(s) | 232, 271, 601 |
| Sau96I | GGNCC | 4 cut(s) | 30, 117, 345, 525 |
| SchI | GAGTC | 2 cut(s) | 422, 722 |
| ScrFI | CCNGG | 2 cut(s) | 373, 530 |
| SfaNI | GCATC | 2 cut(s) | 158, 637 |
| SfoI | GGCGCC | 1 cut(s) | 99 |
| Sfr274I | CTCGAG | 1 cut(s) | 746 |
| SinI | GGWCC | 2 cut(s) | 117, 525 |
| SlaI | CTCGAG | 1 cut(s) | 746 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 459, 609, 806, 845 |
| SmlI | CTYRAG | 1 cut(s) | 746 |
| SmoI | CTYRAG | 1 cut(s) | 746 |
| Sse9I | AATT | 3 cut(s) | 317, 790, 836 |
| SsiI | CCGC | 5 cut(s) | 156, 203, 343, 571, 662 |
| SspDI | GGCGCC | 1 cut(s) | 97 |
| SspI | AATATT | 2 cut(s) | 82, 965 |
| SspMI | CTAG | 2 cut(s) | 182, 720 |
| StyD4I | CCNGG | 2 cut(s) | 371, 528 |
| TaaI | ACNGT | 1 cut(s) | 631 |
| TaiI | ACGT | 3 cut(s) | 772, 810, 926 |
| TaqI | TCGA | 2 cut(s) | 26, 747 |
| TasI | AATT | 3 cut(s) | 317, 790, 836 |
| TauI | GCSGC | 4 cut(s) | 159, 205, 346, 664 |
| TfiI | GAWTC | 1 cut(s) | 59 |
| TscAI | CASTG | 3 cut(s) | 281, 501, 624 |
| TseFI | GTSAC | 4 cut(s) | 240, 367, 784, 808 |
| TseI | GCWGC | 3 cut(s) | 7, 340, 763 |
| Tsp45I | GTSAC | 4 cut(s) | 240, 367, 784, 808 |
| TspDTI | ATGAA | 3 cut(s) | 298, 344, 385 |
| TspGWI | ACGGA | 2 cut(s) | 109, 565 |
| TspRI | CASTG | 3 cut(s) | 281, 501, 624 |
| VpaK11BI | GGWCC | 2 cut(s) | 117, 525 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 696 |
| XapI | RAATTY | 2 cut(s) | 790, 836 |
| XceI | RCATGY | 1 cut(s) | 340 |
| XhoI | CTCGAG | 1 cut(s) | 746 |
| XspI | CTAG | 2 cut(s) | 182, 720 |