Reverse transcriptase (RNA-dependent DNA polymerase)
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 203 |
| AcsI | RAATTY | 2 cut(s) | 65, 263 |
| AcyI | GRCGYC | 1 cut(s) | 337 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 544 |
| AflIII | ACRYGT | 1 cut(s) | 541 |
| AgsI | TTSAA | 2 cut(s) | 124, 269 |
| AjiI | CACGTC | 1 cut(s) | 542 |
| AleI | CACNNNNGTG | 1 cut(s) | 540 |
| AluBI | AGCT | 5 cut(s) | 104, 272, 292, 317, 364 |
| AluI | AGCT | 5 cut(s) | 104, 272, 292, 317, 364 |
| Alw21I | GWGCWC | 1 cut(s) | 238 |
| AoxI | GGCC | 1 cut(s) | 173 |
| ApeKI | GCWGC | 1 cut(s) | 164 |
| ApoI | RAATTY | 2 cut(s) | 65, 263 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 69 |
| AspLEI | GCGC | 1 cut(s) | 215 |
| AspS9I | GGNCC | 2 cut(s) | 173, 429 |
| AsuHPI | GGTGA | 2 cut(s) | 203, 527 |
| AvaII | GGWCC | 1 cut(s) | 429 |
| BanII | GRGCYC | 1 cut(s) | 334 |
| Bbv12I | GWGCWC | 1 cut(s) | 238 |
| BbvI | GCAGC | 1 cut(s) | 176 |
| BccI | CCATC | 1 cut(s) | 142 |
| BfoI | RGCGCY | 1 cut(s) | 216 |
| BisI | GCNGC | 1 cut(s) | 165 |
| BlpI | GCTNAGC | 1 cut(s) | 105 |
| BlsI | GCNGC | 1 cut(s) | 166 |
| Bme18I | GGWCC | 1 cut(s) | 429 |
| BmgBI | CACGTC | 1 cut(s) | 542 |
| BmgT120I | GGNCC | 2 cut(s) | 173, 429 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 105 |
| BsaAI | YACGTR | 1 cut(s) | 327 |
| BsaHI | GRCGYC | 1 cut(s) | 337 |
| BsaJI | CCNNGG | 1 cut(s) | 176 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 544 |
| Bse1I | ACTGG | 1 cut(s) | 20 |
| Bse3DI | GCAATG | 1 cut(s) | 428 |
| BseDI | CCNNGG | 1 cut(s) | 176 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 544 |
| BseMI | GCAATG | 1 cut(s) | 428 |
| BseMII | CTCAG | 2 cut(s) | 96, 309 |
| BseNI | ACTGG | 1 cut(s) | 20 |
| BseXI | GCAGC | 1 cut(s) | 176 |
| BshFI | GGCC | 1 cut(s) | 175 |
| BsiHKAI | GWGCWC | 1 cut(s) | 238 |
| BsiSI | CCGG | 1 cut(s) | 86 |
| BslFI | GGGAC | 1 cut(s) | 542 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 544 |
| BsmFI | GGGAC | 1 cut(s) | 542 |
| BsmI | GAATGC | 1 cut(s) | 58 |
| BsnI | GGCC | 1 cut(s) | 175 |
| Bsp1286I | GDGCHC | 2 cut(s) | 238, 334 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 105 |
| Bsp19I | CCATGG | 1 cut(s) | 176 |
| BspACI | CCGC | 1 cut(s) | 203 |
| BspANI | GGCC | 1 cut(s) | 175 |
| BspCNI | CTCAG | 2 cut(s) | 97, 310 |
| BspHI | TCATGA | 1 cut(s) | 217 |
| BsrDI | GCAATG | 1 cut(s) | 428 |
| BsrI | ACTGG | 1 cut(s) | 20 |
| BssECI | CCNNGG | 1 cut(s) | 176 |
| BssNI | GRCGYC | 1 cut(s) | 337 |
| BssT1I | CCWWGG | 1 cut(s) | 176 |
| Bst4CI | ACNGT | 1 cut(s) | 96 |
| BstACI | GRCGYC | 1 cut(s) | 337 |
| BstBAI | YACGTR | 1 cut(s) | 327 |
| BstC8I | GCNNGC | 1 cut(s) | 290 |
| BstDEI | CTNAG | 3 cut(s) | 105, 318, 391 |
| BstDSI | CCRYGG | 1 cut(s) | 176 |
| BstH2I | RGCGCY | 1 cut(s) | 216 |
| BstHHI | GCGC | 1 cut(s) | 215 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 487 |
| BstV1I | GCAGC | 1 cut(s) | 176 |
| BsuRI | GGCC | 1 cut(s) | 175 |
| BtgI | CCRYGG | 1 cut(s) | 176 |
| BtrI | CACGTC | 1 cut(s) | 542 |
| Cac8I | GCNNGC | 1 cut(s) | 290 |
| CciI | TCATGA | 1 cut(s) | 217 |
| CfoI | GCGC | 1 cut(s) | 215 |
| Cfr13I | GGNCC | 2 cut(s) | 173, 429 |
| CseI | GACGC | 2 cut(s) | 326, 557 |
| CviAII | CATG | 5 cut(s) | 177, 218, 299, 446, 507 |
| CviJI | RGCY | 9 cut(s) | 85, 104, 109, 175, 272, 292, 317, 332, 364 |
| CviKI_1 | RGCY | 9 cut(s) | 85, 104, 109, 175, 272, 292, 317, 332, 364 |
| DdeI | CTNAG | 3 cut(s) | 105, 318, 391 |
| DraI | TTTAAA | 1 cut(s) | 60 |
| Eco130I | CCWWGG | 1 cut(s) | 176 |
| Eco24I | GRGCYC | 1 cut(s) | 334 |
| Eco47I | GGWCC | 1 cut(s) | 429 |
| EcoT14I | CCWWGG | 1 cut(s) | 176 |
| EcoT38I | GRGCYC | 1 cut(s) | 334 |
| ErhI | CCWWGG | 1 cut(s) | 176 |
| FaeI | CATG | 5 cut(s) | 180, 221, 302, 449, 510 |
| FaqI | GGGAC | 1 cut(s) | 542 |
| FatI | CATG | 5 cut(s) | 176, 217, 298, 445, 506 |
| Fnu4HI | GCNGC | 1 cut(s) | 165 |
| FriOI | GRGCYC | 1 cut(s) | 334 |
| Fsp4HI | GCNGC | 1 cut(s) | 165 |
| GlaI | GCGC | 1 cut(s) | 214 |
| GluI | GCNGC | 1 cut(s) | 165 |
| HaeII | RGCGCY | 1 cut(s) | 216 |
| HaeIII | GGCC | 1 cut(s) | 175 |
| HapII | CCGG | 1 cut(s) | 86 |
| HgaI | GACGC | 2 cut(s) | 326, 557 |
| HhaI | GCGC | 1 cut(s) | 215 |
| Hin1I | GRCGYC | 1 cut(s) | 337 |
| Hin1II | CATG | 5 cut(s) | 180, 221, 302, 449, 510 |
| Hin6I | GCGC | 1 cut(s) | 213 |
| HinP1I | GCGC | 1 cut(s) | 213 |
| HpaII | CCGG | 1 cut(s) | 86 |
| HphI | GGTGA | 2 cut(s) | 203, 527 |
| Hpy166II | GTNNAC | 3 cut(s) | 79, 324, 547 |
| Hpy188I | TCNGA | 1 cut(s) | 280 |
| Hpy188III | TCNNGA | 1 cut(s) | 218 |
| Hpy8I | GTNNAC | 3 cut(s) | 79, 324, 547 |
| Hpy99I | CGWCG | 3 cut(s) | 252, 342, 543 |
| HpyCH4III | ACNGT | 1 cut(s) | 96 |
| HpyCH4IV | ACGT | 2 cut(s) | 326, 541 |
| HpyCH4V | TGCA | 2 cut(s) | 386, 469 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 487 |
| HpyF3I | CTNAG | 3 cut(s) | 105, 318, 391 |
| HpySE526I | ACGT | 2 cut(s) | 326, 541 |
| Hsp92I | GRCGYC | 1 cut(s) | 337 |
| Hsp92II | CATG | 5 cut(s) | 180, 221, 302, 449, 510 |
| HspAI | GCGC | 1 cut(s) | 213 |
| LmnI | GCTCC | 2 cut(s) | 241, 314 |
| LpnPI | CCDG | 3 cut(s) | 10, 99, 252 |
| Lsp1109I | GCAGC | 1 cut(s) | 176 |
| MaeII | ACGT | 2 cut(s) | 326, 541 |
| MboII | GAAGA | 1 cut(s) | 235 |
| MfeI | CAATTG | 1 cut(s) | 168 |
| MhlI | GDGCHC | 2 cut(s) | 238, 334 |
| MluCI | AATT | 6 cut(s) | 30, 65, 168, 263, 294, 511 |
| MmeI | TCCRAC | 1 cut(s) | 351 |
| MnlI | CCTC | 5 cut(s) | 224, 253, 442, 465, 511 |
| MroXI | GAANNNNTTC | 1 cut(s) | 69 |
| MseI | TTAA | 5 cut(s) | 59, 198, 405, 417, 565 |
| MslI | CAYNNNNRTG | 1 cut(s) | 540 |
| MspI | CCGG | 1 cut(s) | 86 |
| MunI | CAATTG | 1 cut(s) | 168 |
| Mva1269I | GAATGC | 1 cut(s) | 58 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 487 |
| NcoI | CCATGG | 1 cut(s) | 176 |
| NlaIII | CATG | 5 cut(s) | 180, 221, 302, 449, 510 |
| NmeAIII | GCCGAG | 1 cut(s) | 313 |
| OliI | CACNNNNGTG | 1 cut(s) | 540 |
| PagI | TCATGA | 1 cut(s) | 217 |
| PctI | GAATGC | 1 cut(s) | 58 |
| PdmI | GAANNNNTTC | 1 cut(s) | 69 |
| PkrI | GCNGC | 1 cut(s) | 166 |
| Ppu21I | YACGTR | 1 cut(s) | 327 |
| PspPI | GGNCC | 2 cut(s) | 173, 429 |
| RseI | CAYNNNNRTG | 1 cut(s) | 540 |
| SaqAI | TTAA | 5 cut(s) | 59, 198, 405, 417, 565 |
| SatI | GCNGC | 1 cut(s) | 165 |
| Sau96I | GGNCC | 2 cut(s) | 173, 429 |
| SduI | GDGCHC | 2 cut(s) | 238, 334 |
| SinI | GGWCC | 1 cut(s) | 429 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 540 |
| Sse9I | AATT | 6 cut(s) | 30, 65, 168, 263, 294, 511 |
| SsiI | CCGC | 1 cut(s) | 203 |
| StyI | CCWWGG | 1 cut(s) | 176 |
| TaaI | ACNGT | 1 cut(s) | 96 |
| TaiI | ACGT | 2 cut(s) | 329, 544 |
| TasI | AATT | 6 cut(s) | 30, 65, 168, 263, 294, 511 |
| Tru1I | TTAA | 5 cut(s) | 59, 198, 405, 417, 565 |
| Tru9I | TTAA | 5 cut(s) | 59, 198, 405, 417, 565 |
| TseI | GCWGC | 1 cut(s) | 164 |
| TspDTI | ATGAA | 2 cut(s) | 17, 287 |
| VpaK11BI | GGWCC | 1 cut(s) | 429 |
| XapI | RAATTY | 2 cut(s) | 65, 263 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 141 |
| XmnI | GAANNNNTTC | 1 cut(s) | 69 |