FvH4_4g08213

Domain of unknown function (DUF4283)

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
Physical Location & Seq
Forward (+)
8068930 .. 8071004
2075 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_4g08213.t1

Sequence Viewer

Length: 1812 bp
ATGGTGGAGCCTCCTCCAGCAATTTTCCCGTGGAGTTTCCTTGAGCCCATCTCTCATAAGGGATCTCCTTCTACATCGAATCTGAAATTTCACAAGCCAAAGATTTTTGCTTCTATTGTTGCAGGATCTGAAGAAAATCAGGTTCCTATAAGTCAATTAGCCTCGCCAACAGTTTGTGGAGATACTGTTTTTATGAAGATCAATGAGAGGATTTATCAAGAACAACTAGCTACTTGCCGTAACAATCTGATCGGTAGATTGCTTCTCCGTAAGGGTTCTATCCCAATGAAAACCGAAACTCTAAAGGCTTCTTTGCATTCGCTTTGGCGCCCATCAGATCCCTGGCGTTTGGTTCCCATTGGTAAAGGGTATTTTGACATCCACTTCAATTCTGAAACAGATATGCGTAAGGTTTGGGGAGGCGGTACTTGCACTCTCGAATCGGGGATTTTCCGTCTAGCTCAATGGAAACCTGACTTCAAGCCTGGTGATGTTCTTCCTCAAACACATGCACAAGTTTGGGTTCGAATAGCAGACCTCAGTCAAGAGTATTGGCACCCACAACTCATTCTAGAAATTGCTCGGGGAGTGGGTACCCCGTTGCAATTGGACCCGGCCACTAAAGAGCAAAGATTTGGCTACTTTGATAGTGTTGACCTAATGGGCTCCCTTCCAACGTCCATTATGGTCGAAAGAGAACACCATTGTTTTCCAGTAGGTATTGAGTATGAAAACCTACCTTCTCAATGCAGTCACTATGGTTTCATTGGGCATGAAAAGAAAAATTGCAGGCAATTGAAGGCCAAGGAAGTTCCGTCTAAACGCATAGAGCAACCTCTGACAGGAGAACAAGTTTGTACTAATCCAGAGGTTACACCTATTGGCACTTCCATTGAAGCTCCCATGTCGAGTGATGTCATCGTGGCTTTAGTGGATTCTGTTGTAGAAGAAGCGGAAATAGCTGCGGATCGTATGGAGGAACAAGCTCATAAGGAAACAGAGGAGGATAAGTCAACCTCTACTGATGCCTCTGATGATTCAGAAACTGATAACCAGATTGGTAATTCACCAACCCGGTCTTGGGGCGAGATTTTTCAGCAGGAGAAGGATGGATATATGCACAAGGAGGCTCCACCTAGCGCTCCTCCTAGCCTTGGTCCTCCTCTTGGTTTTGCTAATTCTCATGTAGCTTTAGAAATCGATTCAGTTGCACAGTTCGTCAATGGGGAAGATATGGATGGATTTACTCCTGTTCTCACTAAAACACAAAAGAAGCTGGAGAAAAAGAAAAACAAGAGTGTGGTTGATGCATCTCCAGACCATAAAGCTCCTTACCCATCGAGGCCAATGGTTTCGTTTGACTCTGTGCCTGCTGCTTATTGGGCCTCCTTAAATCTACGACTAATTTCTGTAAATGATAGAGGTACTCTTCTCCCAAATATCTGGCTTCTTGGTGCTTTGCATATCTCTCCTCCTACTTTTGTGTTTGTTGCAGAACAACACATTACTATCCAGCCTAATTTGGAAGGCACTCCTACTAAACTTTCTTGTGTATATGCGCCTACAACTGCTCTAAAACGATGTCAGTTATGGTCAGAGTTATTAATTCTCCGTCAACAAACCACTATTCCATGGATGGCAATTGGAGATTTTAATGCAGTATTGGGGGCCCATGAGGCCAAGAATGGTTGCATTCCGGCACGTTCATCTTGTGAGGATTTTCGCAATGCCACAGATCAATGTAATTTTACTCATATTGATTCTTTACATGGTCTAAAGGGCGAGGGCGAAAACATTTGGAACGACGTCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

604

Amino Acids

67.02

Weight (kDa)

5.55

Isoelectric Point (pI)

50.6

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF4283 PF14111 78 - 162 2.3e-07 Domain of unknown function (DUF4283)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000044)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G07760 AT5G28823
fragaria_vesca FvH4_1g13572 FvH4_2g03281 FvH4_2g04691 FvH4_2g08332 FvH4_2g08333 FvH4_2g15313 FvH4_2g26101 FvH4_2g29541 FvH4_3g06911 FvH4_3g34351 FvH4_3g43733 FvH4_4g02432 FvH4_4g05601 FvH4_4g08213 FvH4_4g09961 FvH4_4g10131 FvH4_4g20001 FvH4_4g20002 FvH4_5g01051 FvH4_5g01401 FvH4_5g27943 FvH4_6g09220 FvH4_6g17383 FvH4_6g35491 FvH4_6g46421 FvH4_7g04151 FvH4_7g13962 FvH4_7g18611 FvH4_7g19491 FvH4_7g19511 FvH4_7g26562
malus_domestica MD06G1221600.v1.1
pyrus_communis pycom10g21150
rosa_chinensis RchiOBHm_Chr1g0337571 RchiOBHm_Chr2g0168771 RchiOBHm_Chr3g0453631 RchiOBHm_Chr6g0278581
rosa_laevigata RLG00000001899 RLG00000001925 RLG00000002026 RLG00000003410 RLG00000003767 RLG00000004304 RLG00000004473 RLG00000004677 RLG00000006856 RLG00000007994 RLG00000009888 RLG00000011627 RLG00000012174 RLG00000012217 RLG00000013118 RLG00000013736 RLG00000014194 RLG00000014251 RLG00000015011 RLG00000015057 RLG00000015235 RLG00000017416 RLG00000018052 RLG00000018537 RLG00000019968 RLG00000020096 RLG00000020263 RLG00000022606 RLG00000023119 RLG00000028111 RLG00000029686 RLG00000030126 RLG00000031124 RLG00000031236 RLG00000032766 RLG00000033171 RLG00000033548 RLG00000033987 RLG00000034062 RLG00000035115 RLG00000035863
rosa_multiflora Rmu_co8036712.1_g000001 Rmu_co8080248.1_g000001 Rmu_co8208334.1_g000001 Rmu_co8253451.1_g000001 Rmu_co8393241.1_g000001 Rmu_co8522225.1_g000005 Rmu_sc0000060.1_g000030 Rmu_sc0000060.1_g000031 Rmu_sc0000060.1_g000032 Rmu_sc0000090.1_g000008 Rmu_sc0000149.1_g000051 Rmu_sc0000149.1_g000058 Rmu_sc0000309.1_g000050 Rmu_sc0000370.1_g000022 Rmu_sc0000370.1_g000023 Rmu_sc0000370.1_g000024 Rmu_sc0000418.1_g000018 Rmu_sc0000427.1_g000014 Rmu_sc0000427.1_g000015 Rmu_sc0000434.1_g000008 Rmu_sc0000487.1_g000038 Rmu_sc0000487.1_g000039 Rmu_sc0000569.1_g000029 Rmu_sc0000580.1_g000097 Rmu_sc0000595.1_g000068 Rmu_sc0000607.1_g000027 Rmu_sc0000738.1_g000004 Rmu_sc0000758.1_g000001 Rmu_sc0000758.1_g000002 Rmu_sc0000870.1_g000019 Rmu_sc0000924.1_g000040 Rmu_sc0000924.1_g000041 Rmu_sc0000999.1_g000037 Rmu_sc0001001.1_g000001 Rmu_sc0001010.1_g000080 Rmu_sc0001075.1_g000041 Rmu_sc0001097.1_g000016 Rmu_sc0001173.1_g000020 Rmu_sc0001258.1_g000010 Rmu_sc0001425.1_g000031 Rmu_sc0001493.1_g000020 Rmu_sc0001493.1_g000021 Rmu_sc0001644.1_g000024 Rmu_sc0001648.1_g000039 Rmu_sc0001662.1_g000002 Rmu_sc0001849.1_g000046 Rmu_sc0001851.1_g000038 Rmu_sc0001861.1_g000006 Rmu_sc0001899.1_g000008 Rmu_sc0002231.1_g000023 Rmu_sc0002393.1_g000012 Rmu_sc0002515.1_g000010 Rmu_sc0002551.1_g000013 Rmu_sc0002680.1_g000029 Rmu_sc0002700.1_g000030 Rmu_sc0002700.1_g000031 Rmu_sc0002709.1_g000035 Rmu_sc0002779.1_g000017 Rmu_sc0003267.1_g000040 Rmu_sc0003306.1_g000009 Rmu_sc0003338.1_g000014 Rmu_sc0003522.1_g000038 Rmu_sc0003522.1_g000039 Rmu_sc0003653.1_g000031 Rmu_sc0003901.1_g000003 Rmu_sc0003920.1_g000009 Rmu_sc0004014.1_g000009 Rmu_sc0004016.1_g000013 Rmu_sc0004031.1_g000002 Rmu_sc0004106.1_g000001 Rmu_sc0004432.1_g000004 Rmu_sc0004481.1_g000020 Rmu_sc0004874.1_g000005 Rmu_sc0004928.1_g000005 Rmu_sc0005065.1_g000053 Rmu_sc0005091.1_g000005 Rmu_sc0005217.1_g000015 Rmu_sc0005242.1_g000002 Rmu_sc0005300.1_g000011 Rmu_sc0005400.1_g000004 Rmu_sc0005486.1_g000007 Rmu_sc0005527.1_g000015 Rmu_sc0006059.1_g000021 Rmu_sc0006087.1_g000004 Rmu_sc0006184.1_g000006 Rmu_sc0006184.1_g000007 Rmu_sc0006578.1_g000006 Rmu_sc0006730.1_g000010 Rmu_sc0006736.1_g000030 Rmu_sc0006736.1_g000033 Rmu_sc0007333.1_g000018 Rmu_sc0007856.1_g000010 Rmu_sc0008231.1_g000003 Rmu_sc0009862.1_g000012 Rmu_sc0010547.1_g000001 Rmu_sc0010547.1_g000003 Rmu_sc0010632.1_g000012 Rmu_sc0010747.1_g000008 Rmu_sc0011075.1_g000009 Rmu_sc0011565.1_g000004 Rmu_sc0011641.1_g000003 Rmu_sc0013102.1_g000013 Rmu_sc0013160.1_g000006 Rmu_sc0014846.1_g000004 Rmu_sc0017037.1_g000003 Rmu_sc0018203.1_g000001 Rmu_sc0018204.1_g000001 Rmu_sc0018348.1_g000001 Rmu_sc0019354.1_g000002 Rmu_sc0021630.1_g000002 Rmu_sc0022987.1_g000002 Rmu_sc0024469.1_g000005 Rmu_sc0033519.1_g000001 Rmu_sc0033519.1_g000002 Rmu_sc0033519.1_g000003 Rmu_sc0042775.1_g000001 Rmu_ssc0000110.1_g000003 Rmu_ssc0000110.1_g000004 Rmu_ssc0000126.1_g000068 Rmu_ssc0000200.1_g000007 Rmu_ssc0000295.1_g000003 Rmu_ssc0000295.1_g000004 Rmu_ssc0000299.1_g000010 Rmu_ssc0000308.1_g000024 Rmu_ssc0000339.1_g000006 Rmu_ssc0000385.1_g000012 Rmu_ssc0000409.1_g000004 Rmu_ssc0000421.1_g000004
rosa_roxburghii Rroxscaffold_156G00440360 Rroxscaffold_166G00440800 Rroxscaffold_1G00039040 Rroxscaffold_1G00039050 Rroxscaffold_1G00073950 Rroxscaffold_2G00091710 Rroxscaffold_2G00120050 Rroxscaffold_2G00122590 Rroxscaffold_3G00219700 Rroxscaffold_3G00264140 Rroxscaffold_4G00290600 Rroxscaffold_4G00323610 Rroxscaffold_4G00328460 Rroxscaffold_5G00343440 Rroxscaffold_5G00343570 Rroxscaffold_5G00378540 Rroxscaffold_5G00385090 Rroxscaffold_7G00169130 Rroxscaffold_7G00216420
rosa_rugosa Rorug01G0065800 Rorug01G0073500 Rorug01G0091700 Rorug01G0096500 Rorug01G0204700.1 Rorug01G0249100 Rorug01G0333800 Rorug01G0333900 Rorug01G0339500 Rorug01G0431300 Rorug02G0085400 Rorug02G0117500 Rorug02G0130900 Rorug02G0178800 Rorug02G0226700 Rorug02G0336300 Rorug02G0338700 Rorug02G0351400 Rorug02G0459900 Rorug03G0187000 Rorug03G0223700 Rorug03G0291300 Rorug03G0291300 Rorug03G0311100 Rorug03G0316900 Rorug03G0346000 Rorug04G0014500 Rorug04G0014600 Rorug04G0124100 Rorug04G0136500 Rorug04G0302000 Rorug04G0338100 Rorug04G0338200 Rorug04G0413100 Rorug05G0182200 Rorug05G0226500 Rorug05G0273300 Rorug05G0292200 Rorug05G0292200 Rorug05G0392500 Rorug05G0394500 Rorug05G0394600 Rorug05G0505600.1 Rorug06G0351400 Rorug06G0393400 Rorug06G0393600 Rorug06G0470000 Rorug07G0063100 Rorug07G0086800 Rorug07G0109200 Rorug07G0236100
rosa_samantha Rh1AG010800 Rh1AG011100 Rh1AG064900 Rh1AG088000 Rh1AG207100 Rh1AG262000 Rh1AG300800 Rh1BG043000 Rh1BG144600 Rh1BG180700 Rh1BG180800 Rh1BG328800 Rh1BG399400 Rh1CG041400 Rh1CG047300 Rh1CG379700 Rh1DG036500 Rh1DG083000 Rh1DG210700 Rh1DG210800 Rh1DG231100 Rh2AG007900 Rh2AG055500 Rh2AG339100 Rh2AG368100 Rh2BG243300 Rh2BG258900 Rh2BG292000 Rh2BG333500 Rh2BG387300 Rh2BG612800 Rh2BG619100 Rh2CG026500 Rh2CG163600 Rh2CG535700 Rh2DG186400 Rh2DG235000 Rh2DG314500 Rh2DG388500 Rh2DG391400 Rh2DG496900 Rh2DG526700 Rh2DG570700 Rh3AG330700 Rh3BG266900 Rh3CG236000 Rh3CG340400 Rh3DG090000 Rh3DG278400 Rh3DG297600 Rh3DG362600 Rh4AG001300 Rh4AG023300 Rh4AG097100 Rh4AG427000 Rh4BG029400 Rh4BG032400 Rh4BG086000 Rh4BG249200 Rh4CG001900 Rh4CG040600 Rh4CG093000 Rh4CG106300 Rh4CG113200 Rh4CG113900 Rh4DG002300 Rh4DG144400 Rh4DG234200 Rh5AG043700 Rh5AG084900 Rh5AG161500 Rh5AG409000 Rh5AG457200 Rh5AG457900 Rh5AG473700 Rh5AG520600 Rh5BG042100 Rh5BG124100 Rh5BG323500 Rh5BG417200 Rh5BG443700 Rh5BG451500 Rh5BG464900 Rh5BG470400 Rh5BG522500 Rh5CG068800 Rh5CG178300 Rh5CG231000 Rh5CG258600 Rh5CG394500 Rh5CG473700 Rh5DG164700 Rh5DG235400 Rh5DG261300 Rh5DG304900 Rh5DG334500 Rh5DG424300 Rh5DG458400 Rh5DG478600 Rh5DG552300 Rh5DG552700 Rh6AG037000 Rh6AG042100 Rh6AG255500 Rh6AG283400 Rh6AG291800 Rh6BG049600 Rh6BG080700 Rh6BG114600 Rh6BG128900 Rh6BG352500 Rh6CG052400 Rh6CG112900 Rh6CG113000 Rh6CG131300 Rh6CG157700 Rh6CG243200 Rh6CG254100 Rh6CG275700 Rh6CG299700 Rh6CG309100 Rh6CG317600 Rh6CG342600 Rh6CG471900 Rh6DG038200 Rh6DG102300 Rh6DG114400 Rh6DG225900 Rh6DG292900 Rh6DG320700 Rh6DG512800 Rh7AG217700 Rh7AG313900 Rh7AG446000 Rh7AG472600 Rh7BG223100 Rh7BG349900 Rh7BG352000 Rh7CG160200 Rh7CG233900 Rh7CG242700 Rh7CG273900 Rh7CG306400 Rh7CG322200 Rh7DG053800 Rh7DG077800 Rh7DG227700 Rh7DG404800
rosa_wichuraiana Rw0G003990 Rw2G022110 Rw2G024890 Rw6G005700 Rw7G008770

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1809
Acc65I GGTACC 1 cut(s) 593
AccB1I GGYRCC 3 cut(s) 327, 555, 593
AciI CCGC 3 cut(s) 423, 953, 965
AclWI GGATC 4 cut(s) 70, 133, 332, 975
AcoI YGGCCR 1 cut(s) 615
AcsI RAATTY 1 cut(s) 86
AcuI CTGAAG 1 cut(s) 150
AcyI GRCGYC 2 cut(s) 328, 1806
AfaI GTAC 4 cut(s) 427, 595, 859, 1426
AfeI AGCGCT 1 cut(s) 1141
AfiI CCNNNNNNNGG 5 cut(s) 842, 1080, 1081, 1154, 1166
AgsI TTSAA 4 cut(s) 388, 481, 799, 896
AjnI CCWGG 2 cut(s) 341, 484
AluBI AGCT 8 cut(s) 230, 461, 899, 962, 986, 1190, 1276, 1328
AluI AGCT 8 cut(s) 230, 461, 899, 962, 986, 1190, 1276, 1328
AlwI GGATC 4 cut(s) 70, 133, 332, 975
AlwNI CAGNNNCTG 2 cut(s) 128, 1046
Ama87I CYCGRG 1 cut(s) 582
Aor51HI AGCGCT 1 cut(s) 1141
AoxI GGCC 6 cut(s) 615, 801, 1343, 1383, 1668, 1677
ApaI GGGCCC 1 cut(s) 1672
ApeKI GCWGC 2 cut(s) 962, 1373
ApoI RAATTY 1 cut(s) 86
AseI ATTAAT 1 cut(s) 1604
Asp718I GGTACC 1 cut(s) 593
AspLEI GCGC 3 cut(s) 330, 1142, 1561
AspS9I GGNCC 5 cut(s) 610, 1157, 1383, 1668, 1669
AsuC2I CCSGG 2 cut(s) 614, 1075
AsuHPI GGTGA 2 cut(s) 500, 1059
AsuII TTCGAA 1 cut(s) 526
AvaI CYCGRG 1 cut(s) 582
AvaII GGWCC 2 cut(s) 610, 1157
BaeGI GKGCMC 1 cut(s) 1672
BanI GGYRCC 3 cut(s) 327, 555, 593
BanII GRGCYC 3 cut(s) 48, 668, 1672
BbvI GCAGC 2 cut(s) 949, 1360
BccI CCATC 6 cut(s) 56, 340, 1103, 1232, 1345, 1630
BceAI ACGGC 1 cut(s) 222
BcgI CGANNNNNNTGC 2 cut(s) 1190, 1224
BciT130I CCWGG 2 cut(s) 343, 486
BcnI CCSGG 2 cut(s) 614, 1075
BfaI CTAG 6 cut(s) 227, 458, 572, 1137, 1149, 1810
BfoI RGCGCY 2 cut(s) 331, 1143
BglI GCCNNNNNGGC 1 cut(s) 1676
BisI GCNGC 2 cut(s) 963, 1374
BlsI GCNGC 2 cut(s) 964, 1375
Bme1390I CCNGG 4 cut(s) 343, 486, 614, 1075
Bme18I GGWCC 2 cut(s) 610, 1157
BmeT110I CYCGRG 1 cut(s) 582
BmgT120I GGNCC 5 cut(s) 610, 1157, 1383, 1668, 1669
BmrFI CCNGG 4 cut(s) 343, 486, 614, 1075
BmsI GCATC 3 cut(s) 1015, 1297, 1319
BoxI GACNNNNGTC 1 cut(s) 540
BplI GAGNNNNNCTC 2 cut(s) 35, 67
BpmI CTGGAG 2 cut(s) 1298, 1299
Bpu14I TTCGAA 1 cut(s) 526
BpuEI CTTGAG 1 cut(s) 62
BpuMI CCSGG 2 cut(s) 614, 1075
Bsa29I ATCGAT 1 cut(s) 1200
BsaHI GRCGYC 2 cut(s) 328, 1806
BsaJI CCNNGG 5 cut(s) 29, 341, 804, 1153, 1631
BsaXI ACNNNNNCTCC 6 cut(s) 171, 201, 837, 867, 995, 1025
Bsc4I CCNNNNNNNGG 5 cut(s) 842, 1080, 1081, 1154, 1166
Bse1I ACTGG 1 cut(s) 713
Bse3DI GCAATG 1 cut(s) 1732
BseBI CCWGG 2 cut(s) 343, 486
BseCI ATCGAT 1 cut(s) 1200
BseDI CCNNGG 5 cut(s) 29, 341, 804, 1153, 1631
BseGI GGATG 4 cut(s) 378, 1114, 1243, 1641
BseLI CCNNNNNNNGG 5 cut(s) 842, 1080, 1081, 1154, 1166
BseMI GCAATG 1 cut(s) 1732
BseMII CTCAG 1 cut(s) 553
BseNI ACTGG 1 cut(s) 713
BseRI GAGGAG 4 cut(s) 1016, 1134, 1152, 1461
BseSI GKGCMC 1 cut(s) 1672
BseXI GCAGC 2 cut(s) 949, 1360
BshFI GGCC 6 cut(s) 617, 803, 1345, 1385, 1670, 1679
BshNI GGYRCC 3 cut(s) 327, 555, 593
BshVI ATCGAT 1 cut(s) 1200
BsiHKCI CYCGRG 1 cut(s) 582
BsiSI CCGG 3 cut(s) 614, 1075, 1697
BslI CCNNNNNNNGG 5 cut(s) 842, 1080, 1081, 1154, 1166
BsmI GAATGC 2 cut(s) 316, 1692
BsnI GGCC 6 cut(s) 617, 803, 1345, 1385, 1670, 1679
BsoBI CYCGRG 1 cut(s) 582
Bsp119I TTCGAA 1 cut(s) 526
Bsp120I GGGCCC 1 cut(s) 1668
Bsp1286I GDGCHC 3 cut(s) 48, 668, 1672
Bsp143I GATC 7 cut(s) 62, 125, 198, 249, 337, 967, 1735
Bsp19I CCATGG 1 cut(s) 1631
BspACI CCGC 3 cut(s) 423, 953, 965
BspANI GGCC 6 cut(s) 617, 803, 1345, 1385, 1670, 1679
BspCNI CTCAG 1 cut(s) 552
BspDI ATCGAT 1 cut(s) 1200
BspPI GGATC 4 cut(s) 70, 133, 332, 975
BspT104I TTCGAA 1 cut(s) 526
BspT107I GGYRCC 3 cut(s) 327, 555, 593
BsrDI GCAATG 1 cut(s) 1732
BsrI ACTGG 1 cut(s) 713
BssECI CCNNGG 5 cut(s) 29, 341, 804, 1153, 1631
BssMI GATC 7 cut(s) 62, 125, 198, 249, 337, 967, 1735
BssNI GRCGYC 2 cut(s) 328, 1806
BssT1I CCWWGG 3 cut(s) 804, 1153, 1631
Bst2UI CCWGG 2 cut(s) 343, 486
Bst4CI ACNGT 3 cut(s) 172, 187, 1215
Bst6I CTCTTC 1 cut(s) 1434
BstACI GRCGYC 2 cut(s) 328, 1806
BstBI TTCGAA 1 cut(s) 526
BstC8I GCNNGC 2 cut(s) 791, 1371
BstDEI CTNAG 1 cut(s) 539
BstDSI CCRYGG 2 cut(s) 29, 1631
BstENI CCTNNNNNAGG 1 cut(s) 840
BstF5I GGATG 4 cut(s) 378, 1114, 1243, 1641
BstH2I RGCGCY 2 cut(s) 331, 1143
BstHHI GCGC 3 cut(s) 330, 1142, 1561
BstKTI GATC 7 cut(s) 65, 128, 201, 252, 340, 970, 1738
BstMBI GATC 7 cut(s) 62, 125, 198, 249, 337, 967, 1735
BstMWI GCNNNNNNNGC 4 cut(s) 429, 959, 1382, 1676
BstNI CCWGG 2 cut(s) 343, 486
BstNSI RCATGY 1 cut(s) 512
BstPAI GACNNNNGTC 1 cut(s) 540
BstSCI CCNGG 4 cut(s) 341, 484, 612, 1073
BstSLI GKGCMC 1 cut(s) 1672
BstV1I GCAGC 2 cut(s) 949, 1360
BstX2I RGATCY 3 cut(s) 62, 125, 337
BstXI CCANNNNNNTGG 1 cut(s) 1443
BstYI RGATCY 3 cut(s) 62, 125, 337
Bsu15I ATCGAT 1 cut(s) 1200
BsuRI GGCC 6 cut(s) 617, 803, 1345, 1385, 1670, 1679
BsuTUI ATCGAT 1 cut(s) 1200
BtgI CCRYGG 2 cut(s) 29, 1631
BtsCI GGATG 4 cut(s) 378, 1114, 1243, 1641
Cac8I GCNNGC 2 cut(s) 791, 1371
CaiI CAGNNNCTG 2 cut(s) 128, 1046
CfoI GCGC 3 cut(s) 330, 1142, 1561
Cfr13I GGNCC 5 cut(s) 610, 1157, 1383, 1668, 1669
ClaI ATCGAT 1 cut(s) 1200
Csp6I GTAC 4 cut(s) 426, 594, 858, 1425
CviAII CATG 7 cut(s) 509, 773, 904, 1184, 1632, 1673, 1769
CviQI GTAC 4 cut(s) 426, 594, 858, 1425
DdeI CTNAG 1 cut(s) 539
DinI GGCGCC 1 cut(s) 329
DpnI GATC 7 cut(s) 64, 127, 200, 251, 339, 969, 1737
DpnII GATC 7 cut(s) 62, 125, 198, 249, 337, 967, 1735
EaeI YGGCCR 1 cut(s) 615
Eam1104I CTCTTC 1 cut(s) 1434
EarI CTCTTC 1 cut(s) 1434
Eco130I CCWWGG 3 cut(s) 804, 1153, 1631
Eco24I GRGCYC 3 cut(s) 48, 668, 1672
Eco47I GGWCC 2 cut(s) 610, 1157
Eco47III AGCGCT 1 cut(s) 1141
Eco57I CTGAAG 1 cut(s) 150
Eco88I CYCGRG 1 cut(s) 582
EcoNI CCTNNNNNAGG 1 cut(s) 840
EcoO109I RGGNCCY 1 cut(s) 1668
EcoRII CCWGG 2 cut(s) 341, 484
EcoT14I CCWWGG 3 cut(s) 804, 1153, 1631
EcoT22I ATGCAT 1 cut(s) 1312
EcoT38I GRGCYC 3 cut(s) 48, 668, 1672
EgeI GGCGCC 1 cut(s) 329
EheI GGCGCC 1 cut(s) 329
ErhI CCWWGG 3 cut(s) 804, 1153, 1631
FaeI CATG 7 cut(s) 512, 776, 907, 1187, 1635, 1676, 1772
FatI CATG 7 cut(s) 508, 772, 903, 1183, 1631, 1672, 1768
Fnu4HI GCNGC 2 cut(s) 963, 1374
FokI GGATG 4 cut(s) 365, 1121, 1250, 1648
FriOI GRGCYC 3 cut(s) 48, 668, 1672
Fsp4HI GCNGC 2 cut(s) 963, 1374
FspBI CTAG 6 cut(s) 227, 458, 572, 1137, 1149, 1810
GlaI GCGC 3 cut(s) 329, 1141, 1560
GluI GCNGC 2 cut(s) 963, 1374
GsuI CTGGAG 2 cut(s) 1298, 1299
HaeII RGCGCY 2 cut(s) 331, 1143
HaeIII GGCC 6 cut(s) 617, 803, 1345, 1385, 1670, 1679
HapII CCGG 3 cut(s) 614, 1075, 1697
HhaI GCGC 3 cut(s) 330, 1142, 1561
Hin1I GRCGYC 2 cut(s) 328, 1806
Hin1II CATG 7 cut(s) 512, 776, 907, 1187, 1635, 1676, 1772
Hin6I GCGC 3 cut(s) 328, 1140, 1559
HinP1I GCGC 3 cut(s) 328, 1140, 1559
HincII GTYRAC 3 cut(s) 655, 1014, 1616
HindII GTYRAC 3 cut(s) 655, 1014, 1616
HinfI GANTC 7 cut(s) 79, 440, 935, 1037, 1202, 1361, 1760
HpaII CCGG 3 cut(s) 614, 1075, 1697
HphI GGTGA 2 cut(s) 500, 1059
Hpy166II GTNNAC 3 cut(s) 655, 1014, 1616
Hpy188I TCNGA 9 cut(s) 84, 130, 249, 337, 394, 840, 1033, 1042, 1597
Hpy188III TCNNGA 6 cut(s) 218, 437, 545, 572, 866, 1316
Hpy8I GTNNAC 3 cut(s) 655, 1014, 1616
Hpy99I CGWCG 1 cut(s) 1808
HpyAV CCTTC 6 cut(s) 78, 680, 750, 793, 1099, 1520
HpyCH4III ACNGT 3 cut(s) 172, 187, 1215
HpyCH4IV ACGT 3 cut(s) 677, 1702, 1806
HpyF10VI GCNNNNNNNGC 4 cut(s) 429, 959, 1382, 1676
HpyF3I CTNAG 1 cut(s) 539
HpySE526I ACGT 3 cut(s) 677, 1702, 1806
Hsp92I GRCGYC 2 cut(s) 328, 1806
Hsp92II CATG 7 cut(s) 512, 776, 907, 1187, 1635, 1676, 1772
HspAI GCGC 3 cut(s) 328, 1140, 1559
KasI GGCGCC 1 cut(s) 327
KpnI GGTACC 1 cut(s) 597
Kzo9I GATC 7 cut(s) 62, 125, 198, 249, 337, 967, 1735
LmnI GCTCC 6 cut(s) 7, 671, 904, 1135, 1147, 1333
Lsp1109I GCAGC 2 cut(s) 949, 1360
LweI GCATC 3 cut(s) 1015, 1297, 1319
MaeI CTAG 6 cut(s) 227, 458, 572, 1137, 1149, 1810
MaeII ACGT 3 cut(s) 677, 1702, 1806
MaeIII GTNAC 3 cut(s) 239, 752, 871
MalI GATC 7 cut(s) 64, 127, 200, 251, 339, 969, 1737
MboI GATC 7 cut(s) 62, 125, 198, 249, 337, 967, 1735
MboII GAAGA 6 cut(s) 143, 208, 488, 959, 1241, 1421
MfeI CAATTG 3 cut(s) 605, 794, 1641
MflI RGATCY 3 cut(s) 62, 125, 337
MhlI GDGCHC 3 cut(s) 48, 668, 1672
Mly113I GGCGCC 1 cut(s) 328
MlyI GAGTC 1 cut(s) 1355
MmeI TCCRAC 1 cut(s) 698
Mph1103I ATGCAT 1 cut(s) 1312
MseI TTAA 3 cut(s) 1391, 1604, 1653
MspI CCGG 3 cut(s) 614, 1075, 1697
MspR9I CCNGG 4 cut(s) 343, 486, 614, 1075
MunI CAATTG 3 cut(s) 605, 794, 1641
Mva1269I GAATGC 2 cut(s) 316, 1692
MvaI CCWGG 2 cut(s) 343, 486
MwoI GCNNNNNNNGC 4 cut(s) 429, 959, 1382, 1676
NarI GGCGCC 1 cut(s) 328
NciI CCSGG 2 cut(s) 614, 1075
NcoI CCATGG 1 cut(s) 1631
NdeII GATC 7 cut(s) 62, 125, 198, 249, 337, 967, 1735
NlaIII CATG 7 cut(s) 512, 776, 907, 1187, 1635, 1676, 1772
NmuCI GTSAC 1 cut(s) 752
NsiI ATGCAT 1 cut(s) 1312
NspI RCATGY 1 cut(s) 512
NspV TTCGAA 1 cut(s) 526
PctI GAATGC 2 cut(s) 316, 1692
PfeI GAWTC 6 cut(s) 79, 440, 935, 1037, 1202, 1760
PkrI GCNGC 2 cut(s) 964, 1375
PleI GAGTC 1 cut(s) 1355
PluTI GGCGCC 1 cut(s) 331
PpsI GAGTC 1 cut(s) 1355
PshAI GACNNNNGTC 1 cut(s) 540
PshBI ATTAAT 1 cut(s) 1604
Psp6I CCWGG 2 cut(s) 341, 484
PspGI CCWGG 2 cut(s) 341, 484
PspOMI GGGCCC 1 cut(s) 1668
PspPI GGNCC 5 cut(s) 610, 1157, 1383, 1668, 1669
PstNI CAGNNNCTG 2 cut(s) 128, 1046
PsuI RGATCY 3 cut(s) 62, 125, 337
RsaI GTAC 4 cut(s) 427, 595, 859, 1426
RsaNI GTAC 4 cut(s) 426, 594, 858, 1425
SaqAI TTAA 3 cut(s) 1391, 1604, 1653
SatI GCNGC 2 cut(s) 963, 1374
Sau3AI GATC 7 cut(s) 62, 125, 198, 249, 337, 967, 1735
Sau96I GGNCC 5 cut(s) 610, 1157, 1383, 1668, 1669
SchI GAGTC 1 cut(s) 1355
ScrFI CCNGG 4 cut(s) 343, 486, 614, 1075
SduI GDGCHC 3 cut(s) 48, 668, 1672
SfaNI GCATC 3 cut(s) 1015, 1297, 1319
SfiI GGCCNNNNNGGCC 1 cut(s) 1676
SfoI GGCGCC 1 cut(s) 329
SfuI TTCGAA 1 cut(s) 526
SinI GGWCC 2 cut(s) 610, 1157
SmlI CTYRAG 1 cut(s) 41
SmoI CTYRAG 1 cut(s) 41
SsiI CCGC 3 cut(s) 423, 953, 965
SspDI GGCGCC 1 cut(s) 327
SspMI CTAG 6 cut(s) 227, 458, 572, 1137, 1149, 1810
StyD4I CCNGG 4 cut(s) 341, 484, 612, 1073
StyI CCWWGG 3 cut(s) 804, 1153, 1631
TaaI ACNGT 3 cut(s) 172, 187, 1215
TaiI ACGT 3 cut(s) 680, 1705, 1809
TaqI TCGA 7 cut(s) 77, 438, 526, 690, 908, 1200, 1340
TatI WGTACW 1 cut(s) 857
TfiI GAWTC 6 cut(s) 79, 440, 935, 1037, 1202, 1760
Tru1I TTAA 3 cut(s) 1391, 1604, 1653
Tru9I TTAA 3 cut(s) 1391, 1604, 1653
TseFI GTSAC 1 cut(s) 752
TseI GCWGC 2 cut(s) 962, 1373
Tsp45I GTSAC 1 cut(s) 752
TspDTI ATGAA 6 cut(s) 209, 302, 744, 754, 789, 1695
TspGWI ACGGA 4 cut(s) 257, 443, 804, 1601
VpaK11BI GGWCC 2 cut(s) 610, 1157
VspI ATTAAT 1 cut(s) 1604
XagI CCTNNNNNAGG 1 cut(s) 840
XapI RAATTY 1 cut(s) 86
XbaI TCTAGA 1 cut(s) 571
XceI RCATGY 1 cut(s) 512
XcmI CCANNNNNNNNNTGG 2 cut(s) 339, 1077
XspI CTAG 6 cut(s) 227, 458, 572, 1137, 1149, 1810
ZraI GACGTC 1 cut(s) 1807
Zsp2I ATGCAT 1 cut(s) 1312
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.