Rmu_sc0000595.1_g000068

Domain of unknown function (DUF4283)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000595.1
OG0000044
Physical Location & Seq
Reverse (-)
262517 .. 264128
1612 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000595.1_g000068.1.cds

Sequence Viewer

Length: 1464 bp
atggcgtcgcctcctgctgtatgcccatggagcttccttgagtccttgtcgattcctaagcacttggactctcaaaaccccaaatctgttcagcaaccaaaactcccaaaacccaagacgtttgcctctatacttggagggtctgatgatttgcaggttccaatgagcaagcttgcgcctccaaccatccgtggtgatatggtgtatgttaagattaatgaagcaatttaccaggaccagattatggcatgccgcaacaatctgattggtcggcttctcctacgtaaagggacgacccctttgaaaacggaaaacctaaaacagttactccattctctttggaagccgttggggccatggaggttggttcccattggtaaggggtgttttgatatccatttcaattctgaggctgatatgcgtaaggcttggggtggagatggtgttggaaccctagtacaattggatgctgcaaccaaagagcaaagatttggttattatgctcgtgtgttggtggacgtggatttattgggggctcttcccacctctattatggtggaaagggagggtcattgctttccggtcggaatccattacgaaaatcttcctcctcaatgtagtcattgccatttgattgggcatgatcgttccaattgcaggcaactaaagaaaagtgatgctgctacgaagtcggcggctgcacagacaaagcagaatgttgtcaagcaagagtatagggtgaagggtgcttcatctagacctcttgttactagtgagattgctactgagccaattaataataatatgtcttcacggcaagttgaagctcatgttgtcaatgagtttgctattgagccaacccaggttgttgaaccaacctttattgctgagtcacctcaaattgtggtcaacaaagagtcacaacaatgtgtggtcagtgagcagactgcagggaaaattgtcacgtttgtgaataacatatgtgaagaatcagctattgagcttatggagggaattgcagatgtagttatcgatggggaaaatgatgccaatggaaaaagtagtgttgaaaagggtagtgttgatggttcggaccatgaggagttcggtagtgacttttcaaggagtaactcgacttcacggtcctggaatgatattatggaggaagagggtgaggaagactttgttcctatagatcatcccccgggttttggtcctcaagattctagggcagctctagaaattgatgcagtagctaggcttgcaaatggtgaggatattgatggtttcactcctatgctaactaagtctcaaccgaagactcaagctaaggaaaaaagattgaaaaacatggaggaatcacaggttcgcaaaaaccctttaagggtccggagaagcctttacgactccaatgaaactcatatattggaacatcaggggagtggccaacttggactcctgtaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4283 zf-CCHC_4

Protein Analysis

487

Amino Acids

53.73

Weight (kDa)

5.63

Isoelectric Point (pI)

50.56

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000044)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G07760 AT5G28823
fragaria_vesca FvH4_1g13572 FvH4_2g03281 FvH4_2g04691 FvH4_2g08332 FvH4_2g08333 FvH4_2g15313 FvH4_2g26101 FvH4_2g29541 FvH4_3g06911 FvH4_3g34351 FvH4_3g43733 FvH4_4g02432 FvH4_4g05601 FvH4_4g08213 FvH4_4g09961 FvH4_4g10131 FvH4_4g20001 FvH4_4g20002 FvH4_5g01051 FvH4_5g01401 FvH4_5g27943 FvH4_6g09220 FvH4_6g17383 FvH4_6g35491 FvH4_6g46421 FvH4_7g04151 FvH4_7g13962 FvH4_7g18611 FvH4_7g19491 FvH4_7g19511 FvH4_7g26562
malus_domestica MD06G1221600.v1.1
pyrus_communis pycom10g21150
rosa_chinensis RchiOBHm_Chr1g0337571 RchiOBHm_Chr2g0168771 RchiOBHm_Chr3g0453631 RchiOBHm_Chr6g0278581
rosa_laevigata RLG00000001899 RLG00000001925 RLG00000002026 RLG00000003410 RLG00000003767 RLG00000004304 RLG00000004473 RLG00000004677 RLG00000006856 RLG00000007994 RLG00000009888 RLG00000011627 RLG00000012174 RLG00000012217 RLG00000013118 RLG00000013736 RLG00000014194 RLG00000014251 RLG00000015011 RLG00000015057 RLG00000015235 RLG00000017416 RLG00000018052 RLG00000018537 RLG00000019968 RLG00000020096 RLG00000020263 RLG00000022606 RLG00000023119 RLG00000028111 RLG00000029686 RLG00000030126 RLG00000031124 RLG00000031236 RLG00000032766 RLG00000033171 RLG00000033548 RLG00000033987 RLG00000034062 RLG00000035115 RLG00000035863
rosa_multiflora Rmu_co8036712.1_g000001 Rmu_co8080248.1_g000001 Rmu_co8208334.1_g000001 Rmu_co8253451.1_g000001 Rmu_co8393241.1_g000001 Rmu_co8522225.1_g000005 Rmu_sc0000060.1_g000030 Rmu_sc0000060.1_g000031 Rmu_sc0000060.1_g000032 Rmu_sc0000090.1_g000008 Rmu_sc0000149.1_g000051 Rmu_sc0000149.1_g000058 Rmu_sc0000309.1_g000050 Rmu_sc0000370.1_g000022 Rmu_sc0000370.1_g000023 Rmu_sc0000370.1_g000024 Rmu_sc0000418.1_g000018 Rmu_sc0000427.1_g000014 Rmu_sc0000427.1_g000015 Rmu_sc0000434.1_g000008 Rmu_sc0000487.1_g000038 Rmu_sc0000487.1_g000039 Rmu_sc0000569.1_g000029 Rmu_sc0000580.1_g000097 Rmu_sc0000595.1_g000068 Rmu_sc0000607.1_g000027 Rmu_sc0000738.1_g000004 Rmu_sc0000758.1_g000001 Rmu_sc0000758.1_g000002 Rmu_sc0000870.1_g000019 Rmu_sc0000924.1_g000040 Rmu_sc0000924.1_g000041 Rmu_sc0000999.1_g000037 Rmu_sc0001001.1_g000001 Rmu_sc0001010.1_g000080 Rmu_sc0001075.1_g000041 Rmu_sc0001097.1_g000016 Rmu_sc0001173.1_g000020 Rmu_sc0001258.1_g000010 Rmu_sc0001425.1_g000031 Rmu_sc0001493.1_g000020 Rmu_sc0001493.1_g000021 Rmu_sc0001644.1_g000024 Rmu_sc0001648.1_g000039 Rmu_sc0001662.1_g000002 Rmu_sc0001849.1_g000046 Rmu_sc0001851.1_g000038 Rmu_sc0001861.1_g000006 Rmu_sc0001899.1_g000008 Rmu_sc0002231.1_g000023 Rmu_sc0002393.1_g000012 Rmu_sc0002515.1_g000010 Rmu_sc0002551.1_g000013 Rmu_sc0002680.1_g000029 Rmu_sc0002700.1_g000030 Rmu_sc0002700.1_g000031 Rmu_sc0002709.1_g000035 Rmu_sc0002779.1_g000017 Rmu_sc0003267.1_g000040 Rmu_sc0003306.1_g000009 Rmu_sc0003338.1_g000014 Rmu_sc0003522.1_g000038 Rmu_sc0003522.1_g000039 Rmu_sc0003653.1_g000031 Rmu_sc0003901.1_g000003 Rmu_sc0003920.1_g000009 Rmu_sc0004014.1_g000009 Rmu_sc0004016.1_g000013 Rmu_sc0004031.1_g000002 Rmu_sc0004106.1_g000001 Rmu_sc0004432.1_g000004 Rmu_sc0004481.1_g000020 Rmu_sc0004874.1_g000005 Rmu_sc0004928.1_g000005 Rmu_sc0005065.1_g000053 Rmu_sc0005091.1_g000005 Rmu_sc0005217.1_g000015 Rmu_sc0005242.1_g000002 Rmu_sc0005300.1_g000011 Rmu_sc0005400.1_g000004 Rmu_sc0005486.1_g000007 Rmu_sc0005527.1_g000015 Rmu_sc0006059.1_g000021 Rmu_sc0006087.1_g000004 Rmu_sc0006184.1_g000006 Rmu_sc0006184.1_g000007 Rmu_sc0006578.1_g000006 Rmu_sc0006730.1_g000010 Rmu_sc0006736.1_g000030 Rmu_sc0006736.1_g000033 Rmu_sc0007333.1_g000018 Rmu_sc0007856.1_g000010 Rmu_sc0008231.1_g000003 Rmu_sc0009862.1_g000012 Rmu_sc0010547.1_g000001 Rmu_sc0010547.1_g000003 Rmu_sc0010632.1_g000012 Rmu_sc0010747.1_g000008 Rmu_sc0011075.1_g000009 Rmu_sc0011565.1_g000004 Rmu_sc0011641.1_g000003 Rmu_sc0013102.1_g000013 Rmu_sc0013160.1_g000006 Rmu_sc0014846.1_g000004 Rmu_sc0017037.1_g000003 Rmu_sc0018203.1_g000001 Rmu_sc0018204.1_g000001 Rmu_sc0018348.1_g000001 Rmu_sc0019354.1_g000002 Rmu_sc0021630.1_g000002 Rmu_sc0022987.1_g000002 Rmu_sc0024469.1_g000005 Rmu_sc0033519.1_g000001 Rmu_sc0033519.1_g000002 Rmu_sc0033519.1_g000003 Rmu_sc0042775.1_g000001 Rmu_ssc0000110.1_g000003 Rmu_ssc0000110.1_g000004 Rmu_ssc0000126.1_g000068 Rmu_ssc0000200.1_g000007 Rmu_ssc0000295.1_g000003 Rmu_ssc0000295.1_g000004 Rmu_ssc0000299.1_g000010 Rmu_ssc0000308.1_g000024 Rmu_ssc0000339.1_g000006 Rmu_ssc0000385.1_g000012 Rmu_ssc0000409.1_g000004 Rmu_ssc0000421.1_g000004
rosa_roxburghii Rroxscaffold_156G00440360 Rroxscaffold_166G00440800 Rroxscaffold_1G00039040 Rroxscaffold_1G00039050 Rroxscaffold_1G00073950 Rroxscaffold_2G00091710 Rroxscaffold_2G00120050 Rroxscaffold_2G00122590 Rroxscaffold_3G00219700 Rroxscaffold_3G00264140 Rroxscaffold_4G00290600 Rroxscaffold_4G00323610 Rroxscaffold_4G00328460 Rroxscaffold_5G00343440 Rroxscaffold_5G00343570 Rroxscaffold_5G00378540 Rroxscaffold_5G00385090 Rroxscaffold_7G00169130 Rroxscaffold_7G00216420
rosa_rugosa Rorug01G0065800 Rorug01G0073500 Rorug01G0091700 Rorug01G0096500 Rorug01G0204700.1 Rorug01G0249100 Rorug01G0333800 Rorug01G0333900 Rorug01G0339500 Rorug01G0431300 Rorug02G0085400 Rorug02G0117500 Rorug02G0130900 Rorug02G0178800 Rorug02G0226700 Rorug02G0336300 Rorug02G0338700 Rorug02G0351400 Rorug02G0459900 Rorug03G0187000 Rorug03G0223700 Rorug03G0291300 Rorug03G0291300 Rorug03G0311100 Rorug03G0316900 Rorug03G0346000 Rorug04G0014500 Rorug04G0014600 Rorug04G0124100 Rorug04G0136500 Rorug04G0302000 Rorug04G0338100 Rorug04G0338200 Rorug04G0413100 Rorug05G0182200 Rorug05G0226500 Rorug05G0273300 Rorug05G0292200 Rorug05G0292200 Rorug05G0392500 Rorug05G0394500 Rorug05G0394600 Rorug05G0505600.1 Rorug06G0351400 Rorug06G0393400 Rorug06G0393600 Rorug06G0470000 Rorug07G0063100 Rorug07G0086800 Rorug07G0109200 Rorug07G0236100
rosa_samantha Rh1AG010800 Rh1AG011100 Rh1AG064900 Rh1AG088000 Rh1AG207100 Rh1AG262000 Rh1AG300800 Rh1BG043000 Rh1BG144600 Rh1BG180700 Rh1BG180800 Rh1BG328800 Rh1BG399400 Rh1CG041400 Rh1CG047300 Rh1CG379700 Rh1DG036500 Rh1DG083000 Rh1DG210700 Rh1DG210800 Rh1DG231100 Rh2AG007900 Rh2AG055500 Rh2AG339100 Rh2AG368100 Rh2BG243300 Rh2BG258900 Rh2BG292000 Rh2BG333500 Rh2BG387300 Rh2BG612800 Rh2BG619100 Rh2CG026500 Rh2CG163600 Rh2CG535700 Rh2DG186400 Rh2DG235000 Rh2DG314500 Rh2DG388500 Rh2DG391400 Rh2DG496900 Rh2DG526700 Rh2DG570700 Rh3AG330700 Rh3BG266900 Rh3CG236000 Rh3CG340400 Rh3DG090000 Rh3DG278400 Rh3DG297600 Rh3DG362600 Rh4AG001300 Rh4AG023300 Rh4AG097100 Rh4AG427000 Rh4BG029400 Rh4BG032400 Rh4BG086000 Rh4BG249200 Rh4CG001900 Rh4CG040600 Rh4CG093000 Rh4CG106300 Rh4CG113200 Rh4CG113900 Rh4DG002300 Rh4DG144400 Rh4DG234200 Rh5AG043700 Rh5AG084900 Rh5AG161500 Rh5AG409000 Rh5AG457200 Rh5AG457900 Rh5AG473700 Rh5AG520600 Rh5BG042100 Rh5BG124100 Rh5BG323500 Rh5BG417200 Rh5BG443700 Rh5BG451500 Rh5BG464900 Rh5BG470400 Rh5BG522500 Rh5CG068800 Rh5CG178300 Rh5CG231000 Rh5CG258600 Rh5CG394500 Rh5CG473700 Rh5DG164700 Rh5DG235400 Rh5DG261300 Rh5DG304900 Rh5DG334500 Rh5DG424300 Rh5DG458400 Rh5DG478600 Rh5DG552300 Rh5DG552700 Rh6AG037000 Rh6AG042100 Rh6AG255500 Rh6AG283400 Rh6AG291800 Rh6BG049600 Rh6BG080700 Rh6BG114600 Rh6BG128900 Rh6BG352500 Rh6CG052400 Rh6CG112900 Rh6CG113000 Rh6CG131300 Rh6CG157700 Rh6CG243200 Rh6CG254100 Rh6CG275700 Rh6CG299700 Rh6CG309100 Rh6CG317600 Rh6CG342600 Rh6CG471900 Rh6DG038200 Rh6DG102300 Rh6DG114400 Rh6DG225900 Rh6DG292900 Rh6DG320700 Rh6DG512800 Rh7AG217700 Rh7AG313900 Rh7AG446000 Rh7AG472600 Rh7BG223100 Rh7BG349900 Rh7BG352000 Rh7CG160200 Rh7CG233900 Rh7CG242700 Rh7CG273900 Rh7CG306400 Rh7CG322200 Rh7DG053800 Rh7DG077800 Rh7DG227700 Rh7DG404800
rosa_wichuraiana Rw0G003990 Rw2G022110 Rw2G024890 Rw6G005700 Rw7G008770

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1141
Acc36I ACCTGC 1 cut(s) 145
AccB7I CCANNNNNTGG 1 cut(s) 244
AccIII TCCGGA 1 cut(s) 1389
AciI CCGC 2 cut(s) 253, 695
AcoI YGGCCR 1 cut(s) 1444
AcyI GRCGYC 1 cut(s) 5
AfaI GTAC 1 cut(s) 459
AfiI CCNNNNNNNGG 4 cut(s) 244, 657, 1211, 1384
AgsI TTSAA 7 cut(s) 304, 403, 824, 872, 1070, 1122, 1345
AhlI ACTAGT 1 cut(s) 770
AjiI CACGTC 1 cut(s) 520
AjnI CCWGG 3 cut(s) 231, 861, 1145
AleI CACNNNNGTG 1 cut(s) 968
AluBI AGCT 8 cut(s) 33, 172, 827, 995, 1003, 1235, 1256, 1328
AluI AGCT 8 cut(s) 33, 172, 827, 995, 1003, 1235, 1256, 1328
Alw26I GTCTC 1 cut(s) 1314
Ama87I CYCGRG 1 cut(s) 1204
Aor13HI TCCGGA 1 cut(s) 1389
AoxI GGCC 2 cut(s) 353, 1444
ApeKI GCWGC 4 cut(s) 470, 680, 698, 1232
ArsI GACNNNNNNTTYG 2 cut(s) 283, 315
AseI ATTAAT 2 cut(s) 216, 795
Asp700I GAANNNNTTC 1 cut(s) 603
AspLEI GCGC 1 cut(s) 178
AspS9I GGNCC 6 cut(s) 235, 353, 1093, 1143, 1214, 1387
AsuC2I CCSGG 2 cut(s) 1205, 1206
AsuHPI GGTGA 5 cut(s) 206, 751, 885, 1184, 1283
AvaI CYCGRG 1 cut(s) 1204
AvaII GGWCC 5 cut(s) 235, 1093, 1143, 1214, 1387
BalI TGGCCA 1 cut(s) 1446
BanII GRGCYC 1 cut(s) 538
BarI GAAGNNNNNNTAC 2 cut(s) 1120, 1152
BauI CACGAG 1 cut(s) 504
BbsI GAAGAC 3 cut(s) 801, 1185, 1325
BbvI GCAGC 4 cut(s) 457, 667, 685, 1244
BccI CCATC 5 cut(s) 194, 434, 1028, 1079, 1277
BceAI ACGGC 2 cut(s) 331, 830
BciT130I CCWGG 3 cut(s) 233, 863, 1147
BcnI CCSGG 2 cut(s) 1205, 1206
BcoDI GTCTC 1 cut(s) 1314
BcuI ACTAGT 1 cut(s) 770
BfaI CTAG 6 cut(s) 455, 756, 771, 1227, 1238, 1257
BfmI CTRYAG 2 cut(s) 948, 1191
BfuAI ACCTGC 1 cut(s) 145
BglI GCCNNNNNGGC 1 cut(s) 352
BisI GCNGC 6 cut(s) 253, 471, 681, 696, 699, 1233
BlsI GCNGC 6 cut(s) 254, 472, 682, 697, 700, 1234
Bme1390I CCNGG 5 cut(s) 233, 863, 1147, 1205, 1206
Bme18I GGWCC 5 cut(s) 235, 1093, 1143, 1214, 1387
BmeT110I CYCGRG 1 cut(s) 1204
BmgBI CACGTC 1 cut(s) 520
BmgT120I GGNCC 6 cut(s) 235, 353, 1093, 1143, 1214, 1387
BmiI GGNNCC 5 cut(s) 159, 354, 369, 451, 1388
BmrFI CCNGG 5 cut(s) 233, 863, 1147, 1205, 1206
BmsI GCATC 4 cut(s) 457, 667, 1036, 1237
BpiI GAAGAC 3 cut(s) 801, 1185, 1325
Bpu10I CCTNAGC 2 cut(s) 57, 1329
BpuEI CTTGAG 3 cut(s) 59, 1203, 1308
BpuMI CCSGG 2 cut(s) 1205, 1206
Bsa29I ATCGAT 1 cut(s) 1032
BsaAI YACGTR 1 cut(s) 284
BsaHI GRCGYC 1 cut(s) 5
BsaJI CCNNGG 6 cut(s) 26, 190, 356, 861, 1203, 1204
BsaWI WCCGGW 2 cut(s) 580, 1389
BsaXI ACNNNNNCTCC 7 cut(s) 87, 117, 312, 342, 429, 459, 1440
Bsc4I CCNNNNNNNGG 4 cut(s) 244, 657, 1211, 1384
Bse3DI GCAATG 2 cut(s) 571, 622
BseAI TCCGGA 1 cut(s) 1389
BseBI CCWGG 3 cut(s) 233, 863, 1147
BseCI ATCGAT 1 cut(s) 1032
BseDI CCNNGG 6 cut(s) 26, 190, 356, 861, 1203, 1204
BseGI GGATG 3 cut(s) 186, 472, 1198
BseLI CCNNNNNNNGG 4 cut(s) 244, 657, 1211, 1384
BseMI GCAATG 2 cut(s) 571, 622
BseMII CTCAG 3 cut(s) 399, 777, 879
BseRI GAGGAG 2 cut(s) 600, 1115
BseXI GCAGC 4 cut(s) 457, 667, 685, 1244
BsgI GTGCAG 1 cut(s) 684
Bsh1285I CGRYCG 1 cut(s) 585
BshFI GGCC 2 cut(s) 355, 1446
BshVI ATCGAT 1 cut(s) 1032
BsiEI CGRYCG 1 cut(s) 585
BsiHKCI CYCGRG 1 cut(s) 1204
BsiSI CCGG 3 cut(s) 581, 1205, 1390
BslFI GGGAC 1 cut(s) 304
BslI CCNNNNNNNGG 4 cut(s) 244, 657, 1211, 1384
BsmAI GTCTC 1 cut(s) 1314
BsmFI GGGAC 1 cut(s) 304
BsnI GGCC 2 cut(s) 355, 1446
BsoBI CYCGRG 1 cut(s) 1204
Bsp1286I GDGCHC 1 cut(s) 538
Bsp13I TCCGGA 1 cut(s) 1389
Bsp143I GATC 2 cut(s) 643, 1195
Bsp19I CCATGG 2 cut(s) 26, 356
BspACI CCGC 2 cut(s) 253, 695
BspANI GGCC 2 cut(s) 355, 1446
BspCNI CTCAG 3 cut(s) 400, 778, 880
BspDI ATCGAT 1 cut(s) 1032
BspEI TCCGGA 1 cut(s) 1389
BspLI GGNNCC 5 cut(s) 159, 354, 369, 451, 1388
BspMAI CTGCAG 1 cut(s) 952
BspMI ACCTGC 1 cut(s) 145
BspQI GCTCTTC 1 cut(s) 543
BsrDI GCAATG 2 cut(s) 571, 622
BssECI CCNNGG 6 cut(s) 26, 190, 356, 861, 1203, 1204
BssMI GATC 2 cut(s) 643, 1195
BssNI GRCGYC 1 cut(s) 5
BssSI CACGAG 1 cut(s) 504
BssT1I CCWWGG 2 cut(s) 26, 356
Bst2BI CACGAG 1 cut(s) 504
Bst2UI CCWGG 3 cut(s) 233, 863, 1147
Bst4CI ACNGT 2 cut(s) 324, 1143
Bst6I CTCTTC 2 cut(s) 543, 1161
BstACI GRCGYC 1 cut(s) 5
BstBAI YACGTR 1 cut(s) 284
BstC8I GCNNGC 5 cut(s) 170, 174, 250, 659, 1263
BstDEI CTNAG 6 cut(s) 57, 408, 786, 888, 1305, 1329
BstDSI CCRYGG 3 cut(s) 26, 190, 356
BstF5I GGATG 3 cut(s) 186, 472, 1198
BstHHI GCGC 1 cut(s) 178
BstKTI GATC 2 cut(s) 646, 1198
BstMAI GTCTC 1 cut(s) 1314
BstMBI GATC 2 cut(s) 643, 1195
BstMCI CGRYCG 1 cut(s) 585
BstMWI GCNNNNNNNGC 3 cut(s) 30, 352, 1262
BstNI CCWGG 3 cut(s) 233, 863, 1147
BstNSI RCATGY 1 cut(s) 252
BstSCI CCNGG 5 cut(s) 231, 861, 1145, 1203, 1204
BstSFI CTRYAG 2 cut(s) 948, 1191
BstSNI TACGTA 1 cut(s) 284
BstV1I GCAGC 4 cut(s) 457, 667, 685, 1244
BstV2I GAAGAC 3 cut(s) 801, 1185, 1325
BstXI CCANNNNNNTGG 1 cut(s) 635
Bsu15I ATCGAT 1 cut(s) 1032
BsuRI GGCC 2 cut(s) 355, 1446
BsuTUI ATCGAT 1 cut(s) 1032
BtgI CCRYGG 3 cut(s) 26, 190, 356
BtrI CACGTC 1 cut(s) 520
BtsCI GGATG 3 cut(s) 186, 472, 1198
BtsIMutI CAGTG 1 cut(s) 943
BveI ACCTGC 1 cut(s) 145
Cac8I GCNNGC 5 cut(s) 170, 174, 250, 659, 1263
CfoI GCGC 1 cut(s) 178
Cfr13I GGNCC 6 cut(s) 235, 353, 1093, 1143, 1214, 1387
Cfr9I CCCGGG 1 cut(s) 1204
ClaI ATCGAT 1 cut(s) 1032
Csp6I GTAC 1 cut(s) 458
CviAII CATG 7 cut(s) 27, 249, 357, 641, 830, 1097, 1351
CviQI GTAC 1 cut(s) 458
DdeI CTNAG 6 cut(s) 57, 408, 786, 888, 1305, 1329
DpnI GATC 2 cut(s) 645, 1197
DpnII GATC 2 cut(s) 643, 1195
DrdI GACNNNNNNGTC 1 cut(s) 1141
DseDI GACNNNNNNGTC 1 cut(s) 1141
EaeI YGGCCR 1 cut(s) 1444
Eam1104I CTCTTC 2 cut(s) 543, 1161
EarI CTCTTC 2 cut(s) 543, 1161
Eco105I TACGTA 1 cut(s) 284
Eco130I CCWWGG 2 cut(s) 26, 356
Eco24I GRGCYC 1 cut(s) 538
Eco32I GATATC 1 cut(s) 394
Eco47I GGWCC 5 cut(s) 235, 1093, 1143, 1214, 1387
Eco88I CYCGRG 1 cut(s) 1204
EcoRII CCWGG 3 cut(s) 231, 861, 1145
EcoRV GATATC 1 cut(s) 394
EcoT14I CCWWGG 2 cut(s) 26, 356
EcoT38I GRGCYC 1 cut(s) 538
ErhI CCWWGG 2 cut(s) 26, 356
FaeI CATG 7 cut(s) 30, 252, 360, 644, 833, 1100, 1354
FaqI GGGAC 1 cut(s) 304
FatI CATG 7 cut(s) 26, 248, 356, 640, 829, 1096, 1350
FauNDI CATATG 1 cut(s) 980
Fnu4HI GCNGC 6 cut(s) 253, 471, 681, 696, 699, 1233
FokI GGATG 3 cut(s) 173, 479, 1185
FriOI GRGCYC 1 cut(s) 538
Fsp4HI GCNGC 6 cut(s) 253, 471, 681, 696, 699, 1233
FspBI CTAG 6 cut(s) 455, 756, 771, 1227, 1238, 1257
GlaI GCGC 1 cut(s) 177
GluI GCNGC 6 cut(s) 253, 471, 681, 696, 699, 1233
HaeIII GGCC 2 cut(s) 355, 1446
HapII CCGG 3 cut(s) 581, 1205, 1390
HhaI GCGC 1 cut(s) 178
Hin1I GRCGYC 1 cut(s) 5
Hin1II CATG 7 cut(s) 30, 252, 360, 644, 833, 1100, 1354
Hin6I GCGC 1 cut(s) 176
HinP1I GCGC 1 cut(s) 176
HincII GTYRAC 1 cut(s) 910
HindII GTYRAC 1 cut(s) 910
HindIII AAGCTT 1 cut(s) 170
HpaII CCGG 3 cut(s) 581, 1205, 1390
HphI GGTGA 5 cut(s) 206, 751, 885, 1184, 1283
Hpy166II GTNNAC 2 cut(s) 517, 910
Hpy188I TCNGA 5 cut(s) 145, 264, 409, 587, 1093
Hpy188III TCNNGA 4 cut(s) 756, 1220, 1238, 1390
Hpy8I GTNNAC 2 cut(s) 517, 910
Hpy99I CGWCG 1 cut(s) 10
HpyAV CCTTC 1 cut(s) 736
HpyCH4III ACNGT 2 cut(s) 324, 1143
HpyCH4IV ACGT 4 cut(s) 119, 283, 519, 965
HpyCH4V TGCA 8 cut(s) 154, 473, 657, 701, 950, 1019, 1250, 1265
HpyF10VI GCNNNNNNNGC 3 cut(s) 30, 352, 1262
HpyF3I CTNAG 6 cut(s) 57, 408, 786, 888, 1305, 1329
HpySE526I ACGT 4 cut(s) 119, 283, 519, 965
Hsp92I GRCGYC 1 cut(s) 5
Hsp92II CATG 7 cut(s) 30, 252, 360, 644, 833, 1100, 1354
HspAI GCGC 1 cut(s) 176
Kpn2I TCCGGA 1 cut(s) 1389
Kzo9I GATC 2 cut(s) 643, 1195
LguI GCTCTTC 1 cut(s) 543
LmnI GCTCC 1 cut(s) 30
Lsp1109I GCAGC 4 cut(s) 457, 667, 685, 1244
LweI GCATC 4 cut(s) 457, 667, 1036, 1237
MaeI CTAG 6 cut(s) 455, 756, 771, 1227, 1238, 1257
MaeII ACGT 4 cut(s) 119, 283, 519, 965
MaeIII GTNAC 7 cut(s) 324, 766, 891, 918, 961, 1112, 1127
MalI GATC 2 cut(s) 645, 1197
MboI GATC 2 cut(s) 643, 1195
MboII GAAGA 7 cut(s) 530, 596, 801, 998, 1178, 1190, 1330
MfeI CAATTG 2 cut(s) 461, 652
MhlI GDGCHC 1 cut(s) 538
MlsI TGGCCA 1 cut(s) 1446
MluCI AATT 9 cut(s) 225, 403, 461, 652, 792, 900, 957, 1014, 1242
MluNI TGGCCA 1 cut(s) 1446
MlyI GAGTC 7 cut(s) 50, 62, 899, 926, 1315, 1400, 1449
MmeI TCCRAC 3 cut(s) 206, 427, 565
Mox20I TGGCCA 1 cut(s) 1446
MroI TCCGGA 1 cut(s) 1389
MroXI GAANNNNTTC 1 cut(s) 603
MscI TGGCCA 1 cut(s) 1446
MseI TTAA 4 cut(s) 210, 216, 795, 1382
MslI CAYNNNNRTG 3 cut(s) 925, 968, 1295
Msp20I TGGCCA 1 cut(s) 1446
MspI CCGG 3 cut(s) 581, 1205, 1390
MspR9I CCNGG 5 cut(s) 233, 863, 1147, 1205, 1206
MunI CAATTG 2 cut(s) 461, 652
MvaI CCWGG 3 cut(s) 233, 863, 1147
MwoI GCNNNNNNNGC 3 cut(s) 30, 352, 1262
NciI CCSGG 2 cut(s) 1205, 1206
NcoI CCATGG 2 cut(s) 26, 356
NdeI CATATG 1 cut(s) 980
NdeII GATC 2 cut(s) 643, 1195
NlaIII CATG 7 cut(s) 30, 252, 360, 644, 833, 1100, 1354
NlaIV GGNNCC 5 cut(s) 159, 354, 369, 451, 1388
NmuCI GTSAC 4 cut(s) 891, 918, 961, 1112
NspI RCATGY 1 cut(s) 252
OliI CACNNNNGTG 1 cut(s) 968
PaeI GCATGC 1 cut(s) 252
PciSI GCTCTTC 1 cut(s) 543
PdmI GAANNNNTTC 1 cut(s) 603
PfeI GAWTC 5 cut(s) 52, 588, 989, 1223, 1358
PflMI CCANNNNNTGG 1 cut(s) 244
PfoI TCCNGGA 1 cut(s) 1145
PkrI GCNGC 6 cut(s) 254, 472, 682, 697, 700, 1234
PleI GAGTC 7 cut(s) 49, 62, 898, 925, 1315, 1400, 1449
PpsI GAGTC 7 cut(s) 49, 62, 898, 925, 1315, 1400, 1449
Ppu21I YACGTR 1 cut(s) 284
PshBI ATTAAT 2 cut(s) 216, 795
Psp6I CCWGG 3 cut(s) 231, 861, 1145
PspGI CCWGG 3 cut(s) 231, 861, 1145
PspN4I GGNNCC 5 cut(s) 159, 354, 369, 451, 1388
PspPI GGNCC 6 cut(s) 235, 353, 1093, 1143, 1214, 1387
PstI CTGCAG 1 cut(s) 952
RsaI GTAC 1 cut(s) 459
RsaNI GTAC 1 cut(s) 458
RseI CAYNNNNRTG 3 cut(s) 925, 968, 1295
SapI GCTCTTC 1 cut(s) 543
SaqAI TTAA 4 cut(s) 210, 216, 795, 1382
SatI GCNGC 6 cut(s) 253, 471, 681, 696, 699, 1233
Sau3AI GATC 2 cut(s) 643, 1195
Sau96I GGNCC 6 cut(s) 235, 353, 1093, 1143, 1214, 1387
SchI GAGTC 7 cut(s) 50, 62, 899, 926, 1315, 1400, 1449
ScrFI CCNGG 5 cut(s) 233, 863, 1147, 1205, 1206
SduI GDGCHC 1 cut(s) 538
SfaNI GCATC 4 cut(s) 457, 667, 1036, 1237
SfcI CTRYAG 2 cut(s) 948, 1191
SinI GGWCC 5 cut(s) 235, 1093, 1143, 1214, 1387
SmaI CCCGGG 1 cut(s) 1206
SmiMI CAYNNNNRTG 3 cut(s) 925, 968, 1295
SmlI CTYRAG 3 cut(s) 38, 1218, 1323
SmoI CTYRAG 3 cut(s) 38, 1218, 1323
SnaBI TACGTA 1 cut(s) 284
SpeI ACTAGT 1 cut(s) 770
SphI GCATGC 1 cut(s) 252
Sse9I AATT 9 cut(s) 225, 403, 461, 652, 792, 900, 957, 1014, 1242
SsiI CCGC 2 cut(s) 253, 695
SspMI CTAG 6 cut(s) 455, 756, 771, 1227, 1238, 1257
StyD4I CCNGG 5 cut(s) 231, 861, 1145, 1203, 1204
StyI CCWWGG 2 cut(s) 26, 356
TaaI ACNGT 2 cut(s) 324, 1143
TaiI ACGT 4 cut(s) 122, 286, 522, 968
TaqI TCGA 3 cut(s) 50, 1032, 1133
TasI AATT 9 cut(s) 225, 403, 461, 652, 792, 900, 957, 1014, 1242
TatI WGTACW 1 cut(s) 457
TauI GCSGC 2 cut(s) 255, 698
TfiI GAWTC 5 cut(s) 52, 588, 989, 1223, 1358
Tru1I TTAA 4 cut(s) 210, 216, 795, 1382
Tru9I TTAA 4 cut(s) 210, 216, 795, 1382
TscAI CASTG 1 cut(s) 943
TseFI GTSAC 4 cut(s) 891, 918, 961, 1112
TseI GCWGC 4 cut(s) 470, 680, 698, 1232
Tsp45I GTSAC 4 cut(s) 891, 918, 961, 1112
TspDTI ATGAA 3 cut(s) 234, 741, 1428
TspGWI ACGGA 2 cut(s) 179, 323
TspMI CCCGGG 1 cut(s) 1204
TspRI CASTG 1 cut(s) 943
Van91I CCANNNNNTGG 1 cut(s) 244
VpaK11BI GGWCC 5 cut(s) 235, 1093, 1143, 1214, 1387
VspI ATTAAT 2 cut(s) 216, 795
XbaI TCTAGA 2 cut(s) 755, 1237
XceI RCATGY 1 cut(s) 252
XcmI CCANNNNNNNNNTGG 1 cut(s) 550
XmaI CCCGGG 1 cut(s) 1204
XmnI GAANNNNTTC 1 cut(s) 603
XspI CTAG 6 cut(s) 455, 756, 771, 1227, 1238, 1257
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.