Rmu_sc0005300.1_g000011

Reverse transcriptase (RNA-dependent DNA polymerase)

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0005300.1
Physical Location & Seq
Forward (+)
57811 .. 59011
1201 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0005300.1_g000011.1.cds

Sequence Viewer

Length: 894 bp
atgcaagcccccaatctttggttcttgtgtgttgatgctctcaggccacagattattgcaacttctgatcaacatattactgttggatgcatgcttgatggtcgacattgtgtcctcactgaaatttatgcaaaaactaccatctctgggaggggtcatctttggcaagaactggaacatctcaagctttcatatggtcagggtccctggctcgtttttggggattttaattgcattttgggtgctcatgagaagcgtgggggtggtcctcaaagtgttgtttcttgccaggattttcaaaatatgtgtacttcctgtgtgttaattgatataccaacctgtggccttacttatacatggtctaacgggcacactgaggtttgcttggacagggctttggcctctttgcacttcactggctaccctcaatttgtctttgcttctaagcttcgtgctttgaggagcatgctcagaaattggagtaaagccaatgtaagagatatcgctgcacgggtggctatgctcctgaaggacaaagctaggttgaggtggttacagggtggtgatcgcaacacaacttttctccataacgtggtcaagattaggcgctttcataagactatcacatccctggaagatggccaagagactctttcagatcaagcttctattgttacttgcattgtcaatcattttaaatgctccttcataagcgatccttctctcctcgatatgggtttggtagagagagttattcctcacttagtcactgaaactgaaaattcttctcttgtcctaatgcctacaagggaggaaatttgggacactatcaaggcaatggatgattttagttctcctggaccggatggatttggaggtttttttctatgttag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

297

Amino Acids

33.3

Weight (kDa)

6.58

Isoelectric Point (pI)

40.29

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000044)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G07760 AT5G28823
fragaria_vesca FvH4_1g13572 FvH4_2g03281 FvH4_2g04691 FvH4_2g08332 FvH4_2g08333 FvH4_2g15313 FvH4_2g26101 FvH4_2g29541 FvH4_3g06911 FvH4_3g34351 FvH4_3g43733 FvH4_4g02432 FvH4_4g05601 FvH4_4g08213 FvH4_4g09961 FvH4_4g10131 FvH4_4g20001 FvH4_4g20002 FvH4_5g01051 FvH4_5g01401 FvH4_5g27943 FvH4_6g09220 FvH4_6g17383 FvH4_6g35491 FvH4_6g46421 FvH4_7g04151 FvH4_7g13962 FvH4_7g18611 FvH4_7g19491 FvH4_7g19511 FvH4_7g26562
malus_domestica MD06G1221600.v1.1
pyrus_communis pycom10g21150
rosa_chinensis RchiOBHm_Chr1g0337571 RchiOBHm_Chr2g0168771 RchiOBHm_Chr3g0453631 RchiOBHm_Chr6g0278581
rosa_laevigata RLG00000001899 RLG00000001925 RLG00000002026 RLG00000003410 RLG00000003767 RLG00000004304 RLG00000004473 RLG00000004677 RLG00000006856 RLG00000007994 RLG00000009888 RLG00000011627 RLG00000012174 RLG00000012217 RLG00000013118 RLG00000013736 RLG00000014194 RLG00000014251 RLG00000015011 RLG00000015057 RLG00000015235 RLG00000017416 RLG00000018052 RLG00000018537 RLG00000019968 RLG00000020096 RLG00000020263 RLG00000022606 RLG00000023119 RLG00000028111 RLG00000029686 RLG00000030126 RLG00000031124 RLG00000031236 RLG00000032766 RLG00000033171 RLG00000033548 RLG00000033987 RLG00000034062 RLG00000035115 RLG00000035863
rosa_multiflora Rmu_co8036712.1_g000001 Rmu_co8080248.1_g000001 Rmu_co8208334.1_g000001 Rmu_co8253451.1_g000001 Rmu_co8393241.1_g000001 Rmu_co8522225.1_g000005 Rmu_sc0000060.1_g000030 Rmu_sc0000060.1_g000031 Rmu_sc0000060.1_g000032 Rmu_sc0000090.1_g000008 Rmu_sc0000149.1_g000051 Rmu_sc0000149.1_g000058 Rmu_sc0000309.1_g000050 Rmu_sc0000370.1_g000022 Rmu_sc0000370.1_g000023 Rmu_sc0000370.1_g000024 Rmu_sc0000418.1_g000018 Rmu_sc0000427.1_g000014 Rmu_sc0000427.1_g000015 Rmu_sc0000434.1_g000008 Rmu_sc0000487.1_g000038 Rmu_sc0000487.1_g000039 Rmu_sc0000569.1_g000029 Rmu_sc0000580.1_g000097 Rmu_sc0000595.1_g000068 Rmu_sc0000607.1_g000027 Rmu_sc0000738.1_g000004 Rmu_sc0000758.1_g000001 Rmu_sc0000758.1_g000002 Rmu_sc0000870.1_g000019 Rmu_sc0000924.1_g000040 Rmu_sc0000924.1_g000041 Rmu_sc0000999.1_g000037 Rmu_sc0001001.1_g000001 Rmu_sc0001010.1_g000080 Rmu_sc0001075.1_g000041 Rmu_sc0001097.1_g000016 Rmu_sc0001173.1_g000020 Rmu_sc0001258.1_g000010 Rmu_sc0001425.1_g000031 Rmu_sc0001493.1_g000020 Rmu_sc0001493.1_g000021 Rmu_sc0001644.1_g000024 Rmu_sc0001648.1_g000039 Rmu_sc0001662.1_g000002 Rmu_sc0001849.1_g000046 Rmu_sc0001851.1_g000038 Rmu_sc0001861.1_g000006 Rmu_sc0001899.1_g000008 Rmu_sc0002231.1_g000023 Rmu_sc0002393.1_g000012 Rmu_sc0002515.1_g000010 Rmu_sc0002551.1_g000013 Rmu_sc0002680.1_g000029 Rmu_sc0002700.1_g000030 Rmu_sc0002700.1_g000031 Rmu_sc0002709.1_g000035 Rmu_sc0002779.1_g000017 Rmu_sc0003267.1_g000040 Rmu_sc0003306.1_g000009 Rmu_sc0003338.1_g000014 Rmu_sc0003522.1_g000038 Rmu_sc0003522.1_g000039 Rmu_sc0003653.1_g000031 Rmu_sc0003901.1_g000003 Rmu_sc0003920.1_g000009 Rmu_sc0004014.1_g000009 Rmu_sc0004016.1_g000013 Rmu_sc0004031.1_g000002 Rmu_sc0004106.1_g000001 Rmu_sc0004432.1_g000004 Rmu_sc0004481.1_g000020 Rmu_sc0004874.1_g000005 Rmu_sc0004928.1_g000005 Rmu_sc0005065.1_g000053 Rmu_sc0005091.1_g000005 Rmu_sc0005217.1_g000015 Rmu_sc0005242.1_g000002 Rmu_sc0005300.1_g000011 Rmu_sc0005400.1_g000004 Rmu_sc0005486.1_g000007 Rmu_sc0005527.1_g000015 Rmu_sc0006059.1_g000021 Rmu_sc0006087.1_g000004 Rmu_sc0006184.1_g000006 Rmu_sc0006184.1_g000007 Rmu_sc0006578.1_g000006 Rmu_sc0006730.1_g000010 Rmu_sc0006736.1_g000030 Rmu_sc0006736.1_g000033 Rmu_sc0007333.1_g000018 Rmu_sc0007856.1_g000010 Rmu_sc0008231.1_g000003 Rmu_sc0009862.1_g000012 Rmu_sc0010547.1_g000001 Rmu_sc0010547.1_g000003 Rmu_sc0010632.1_g000012 Rmu_sc0010747.1_g000008 Rmu_sc0011075.1_g000009 Rmu_sc0011565.1_g000004 Rmu_sc0011641.1_g000003 Rmu_sc0013102.1_g000013 Rmu_sc0013160.1_g000006 Rmu_sc0014846.1_g000004 Rmu_sc0017037.1_g000003 Rmu_sc0018203.1_g000001 Rmu_sc0018204.1_g000001 Rmu_sc0018348.1_g000001 Rmu_sc0019354.1_g000002 Rmu_sc0021630.1_g000002 Rmu_sc0022987.1_g000002 Rmu_sc0024469.1_g000005 Rmu_sc0033519.1_g000001 Rmu_sc0033519.1_g000002 Rmu_sc0033519.1_g000003 Rmu_sc0042775.1_g000001 Rmu_ssc0000110.1_g000003 Rmu_ssc0000110.1_g000004 Rmu_ssc0000126.1_g000068 Rmu_ssc0000200.1_g000007 Rmu_ssc0000295.1_g000003 Rmu_ssc0000295.1_g000004 Rmu_ssc0000299.1_g000010 Rmu_ssc0000308.1_g000024 Rmu_ssc0000339.1_g000006 Rmu_ssc0000385.1_g000012 Rmu_ssc0000409.1_g000004 Rmu_ssc0000421.1_g000004
rosa_roxburghii Rroxscaffold_156G00440360 Rroxscaffold_166G00440800 Rroxscaffold_1G00039040 Rroxscaffold_1G00039050 Rroxscaffold_1G00073950 Rroxscaffold_2G00091710 Rroxscaffold_2G00120050 Rroxscaffold_2G00122590 Rroxscaffold_3G00219700 Rroxscaffold_3G00264140 Rroxscaffold_4G00290600 Rroxscaffold_4G00323610 Rroxscaffold_4G00328460 Rroxscaffold_5G00343440 Rroxscaffold_5G00343570 Rroxscaffold_5G00378540 Rroxscaffold_5G00385090 Rroxscaffold_7G00169130 Rroxscaffold_7G00216420
rosa_rugosa Rorug01G0065800 Rorug01G0073500 Rorug01G0091700 Rorug01G0096500 Rorug01G0204700.1 Rorug01G0249100 Rorug01G0333800 Rorug01G0333900 Rorug01G0339500 Rorug01G0431300 Rorug02G0085400 Rorug02G0117500 Rorug02G0130900 Rorug02G0178800 Rorug02G0226700 Rorug02G0336300 Rorug02G0338700 Rorug02G0351400 Rorug02G0459900 Rorug03G0187000 Rorug03G0223700 Rorug03G0291300 Rorug03G0291300 Rorug03G0311100 Rorug03G0316900 Rorug03G0346000 Rorug04G0014500 Rorug04G0014600 Rorug04G0124100 Rorug04G0136500 Rorug04G0302000 Rorug04G0338100 Rorug04G0338200 Rorug04G0413100 Rorug05G0182200 Rorug05G0226500 Rorug05G0273300 Rorug05G0292200 Rorug05G0292200 Rorug05G0392500 Rorug05G0394500 Rorug05G0394600 Rorug05G0505600.1 Rorug06G0351400 Rorug06G0393400 Rorug06G0393600 Rorug06G0470000 Rorug07G0063100 Rorug07G0086800 Rorug07G0109200 Rorug07G0236100
rosa_samantha Rh1AG010800 Rh1AG011100 Rh1AG064900 Rh1AG088000 Rh1AG207100 Rh1AG262000 Rh1AG300800 Rh1BG043000 Rh1BG144600 Rh1BG180700 Rh1BG180800 Rh1BG328800 Rh1BG399400 Rh1CG041400 Rh1CG047300 Rh1CG379700 Rh1DG036500 Rh1DG083000 Rh1DG210700 Rh1DG210800 Rh1DG231100 Rh2AG007900 Rh2AG055500 Rh2AG339100 Rh2AG368100 Rh2BG243300 Rh2BG258900 Rh2BG292000 Rh2BG333500 Rh2BG387300 Rh2BG612800 Rh2BG619100 Rh2CG026500 Rh2CG163600 Rh2CG535700 Rh2DG186400 Rh2DG235000 Rh2DG314500 Rh2DG388500 Rh2DG391400 Rh2DG496900 Rh2DG526700 Rh2DG570700 Rh3AG330700 Rh3BG266900 Rh3CG236000 Rh3CG340400 Rh3DG090000 Rh3DG278400 Rh3DG297600 Rh3DG362600 Rh4AG001300 Rh4AG023300 Rh4AG097100 Rh4AG427000 Rh4BG029400 Rh4BG032400 Rh4BG086000 Rh4BG249200 Rh4CG001900 Rh4CG040600 Rh4CG093000 Rh4CG106300 Rh4CG113200 Rh4CG113900 Rh4DG002300 Rh4DG144400 Rh4DG234200 Rh5AG043700 Rh5AG084900 Rh5AG161500 Rh5AG409000 Rh5AG457200 Rh5AG457900 Rh5AG473700 Rh5AG520600 Rh5BG042100 Rh5BG124100 Rh5BG323500 Rh5BG417200 Rh5BG443700 Rh5BG451500 Rh5BG464900 Rh5BG470400 Rh5BG522500 Rh5CG068800 Rh5CG178300 Rh5CG231000 Rh5CG258600 Rh5CG394500 Rh5CG473700 Rh5DG164700 Rh5DG235400 Rh5DG261300 Rh5DG304900 Rh5DG334500 Rh5DG424300 Rh5DG458400 Rh5DG478600 Rh5DG552300 Rh5DG552700 Rh6AG037000 Rh6AG042100 Rh6AG255500 Rh6AG283400 Rh6AG291800 Rh6BG049600 Rh6BG080700 Rh6BG114600 Rh6BG128900 Rh6BG352500 Rh6CG052400 Rh6CG112900 Rh6CG113000 Rh6CG131300 Rh6CG157700 Rh6CG243200 Rh6CG254100 Rh6CG275700 Rh6CG299700 Rh6CG309100 Rh6CG317600 Rh6CG342600 Rh6CG471900 Rh6DG038200 Rh6DG102300 Rh6DG114400 Rh6DG225900 Rh6DG292900 Rh6DG320700 Rh6DG512800 Rh7AG217700 Rh7AG313900 Rh7AG446000 Rh7AG472600 Rh7BG223100 Rh7BG349900 Rh7BG352000 Rh7CG160200 Rh7CG233900 Rh7CG242700 Rh7CG273900 Rh7CG306400 Rh7CG322200 Rh7DG053800 Rh7DG077800 Rh7DG227700 Rh7DG404800
rosa_wichuraiana Rw0G003990 Rw2G022110 Rw2G024890 Rw6G005700 Rw7G008770

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 3 cut(s) 18, 341, 592
AccI GTMKAC 1 cut(s) 103
AclWI GGATC 1 cut(s) 710
AcoI YGGCCR 1 cut(s) 640
AcsI RAATTY 3 cut(s) 123, 781, 816
AcuI CTGAAG 1 cut(s) 548
AfaI GTAC 1 cut(s) 310
AfiI CCNNNNNNNGG 5 cut(s) 18, 147, 341, 592, 733
AgsI TTSAA 1 cut(s) 299
AhdI GACNNNNNGTC 1 cut(s) 110
AjnI CCWGG 4 cut(s) 206, 288, 630, 856
AjuI GAANNNNNNNTTGG 1 cut(s) 37
AluBI AGCT 4 cut(s) 187, 448, 539, 665
AluI AGCT 4 cut(s) 187, 448, 539, 665
Alw21I GWGCWC 1 cut(s) 247
Alw26I GTCTC 1 cut(s) 641
AlwI GGATC 1 cut(s) 710
AoxI GGCC 4 cut(s) 44, 343, 399, 640
ApeKI GCWGC 1 cut(s) 506
ApoI RAATTY 3 cut(s) 123, 781, 816
AspLEI GCGC 1 cut(s) 609
AspS9I GGNCC 3 cut(s) 203, 266, 860
AsuHPI GGTGA 1 cut(s) 575
AvaII GGWCC 3 cut(s) 203, 266, 860
BaeGI GKGCMC 1 cut(s) 372
BalI TGGCCA 1 cut(s) 642
Bbv12I GWGCWC 1 cut(s) 247
BbvI GCAGC 1 cut(s) 493
BccI CCATC 4 cut(s) 92, 149, 632, 860
BciT130I CCWGG 4 cut(s) 208, 290, 632, 858
BclI TGATCA 1 cut(s) 67
BcoDI GTCTC 1 cut(s) 641
BfaI CTAG 1 cut(s) 540
BfoI RGCGCY 1 cut(s) 610
BisI GCNGC 1 cut(s) 507
BlsI GCNGC 1 cut(s) 508
Bme1390I CCNGG 4 cut(s) 208, 290, 632, 858
Bme18I GGWCC 3 cut(s) 203, 266, 860
BmeRI GACNNNNNGTC 1 cut(s) 110
BmgT120I GGNCC 3 cut(s) 203, 266, 860
BmiI GGNNCC 2 cut(s) 204, 205
BmrFI CCNGG 4 cut(s) 208, 290, 632, 858
BmsI GCATC 2 cut(s) 25, 77
BpuEI CTTGAG 1 cut(s) 167
BsaJI CCNNGG 2 cut(s) 206, 630
BsaWI WCCGGW 1 cut(s) 862
Bsc4I CCNNNNNNNGG 5 cut(s) 18, 147, 341, 592, 733
Bse1I ACTGG 2 cut(s) 177, 421
Bse3DI GCAATG 1 cut(s) 843
BseBI CCWGG 4 cut(s) 208, 290, 632, 858
BseDI CCNNGG 2 cut(s) 206, 630
BseGI GGATG 4 cut(s) 92, 626, 847, 871
BseLI CCNNNNNNNGG 5 cut(s) 18, 147, 341, 592, 733
BseMI GCAATG 1 cut(s) 843
BseMII CTCAG 3 cut(s) 55, 366, 484
BseNI ACTGG 2 cut(s) 177, 421
BseRI GAGGAG 2 cut(s) 475, 716
BseSI GKGCMC 1 cut(s) 372
BseXI GCAGC 1 cut(s) 493
BsgI GTGCAG 1 cut(s) 492
BshFI GGCC 4 cut(s) 46, 345, 401, 642
BsiHKAI GWGCWC 1 cut(s) 247
BsiSI CCGG 1 cut(s) 863
BslFI GGGAC 2 cut(s) 189, 836
BslI CCNNNNNNNGG 5 cut(s) 18, 147, 341, 592, 733
BsmAI GTCTC 1 cut(s) 641
BsmFI GGGAC 2 cut(s) 189, 836
BsnI GGCC 4 cut(s) 46, 345, 401, 642
Bsp1286I GDGCHC 2 cut(s) 247, 372
Bsp143I GATC 4 cut(s) 67, 565, 658, 715
BspANI GGCC 4 cut(s) 46, 345, 401, 642
BspCNI CTCAG 3 cut(s) 54, 367, 483
BspHI TCATGA 1 cut(s) 247
BspLI GGNNCC 2 cut(s) 204, 205
BspPI GGATC 1 cut(s) 710
BsrDI GCAATG 1 cut(s) 843
BsrI ACTGG 2 cut(s) 177, 421
BssECI CCNNGG 2 cut(s) 206, 630
BssMI GATC 4 cut(s) 67, 565, 658, 715
Bst2UI CCWGG 4 cut(s) 208, 290, 632, 858
Bst4CI ACNGT 1 cut(s) 82
BstC8I GCNNGC 3 cut(s) 6, 92, 467
BstDEI CTNAG 5 cut(s) 41, 375, 444, 470, 763
BstF5I GGATG 4 cut(s) 92, 626, 847, 871
BstH2I RGCGCY 1 cut(s) 610
BstHHI GCGC 1 cut(s) 609
BstKTI GATC 4 cut(s) 70, 568, 661, 718
BstMAI GTCTC 1 cut(s) 641
BstMBI GATC 4 cut(s) 67, 565, 658, 715
BstMWI GCNNNNNNNGC 1 cut(s) 515
BstNI CCWGG 4 cut(s) 208, 290, 632, 858
BstNSI RCATGY 2 cut(s) 94, 469
BstSCI CCNGG 4 cut(s) 206, 288, 630, 856
BstSLI GKGCMC 1 cut(s) 372
BstV1I GCAGC 1 cut(s) 493
BsuRI GGCC 4 cut(s) 46, 345, 401, 642
BtsCI GGATG 4 cut(s) 92, 626, 847, 871
BtsIMutI CAGTG 4 cut(s) 117, 372, 414, 768
Cac8I GCNNGC 3 cut(s) 6, 92, 467
CciI TCATGA 1 cut(s) 247
CfoI GCGC 1 cut(s) 609
Cfr13I GGNCC 3 cut(s) 203, 266, 860
Csp6I GTAC 1 cut(s) 309
CviAII CATG 4 cut(s) 91, 248, 357, 466
CviQI GTAC 1 cut(s) 309
DdeI CTNAG 5 cut(s) 41, 375, 444, 470, 763
DpnI GATC 4 cut(s) 69, 567, 660, 717
DpnII GATC 4 cut(s) 67, 565, 658, 715
DraI TTTAAA 1 cut(s) 697
DriI GACNNNNNGTC 1 cut(s) 110
EaeI YGGCCR 1 cut(s) 640
Eam1105I GACNNNNNGTC 1 cut(s) 110
Eco32I GATATC 1 cut(s) 502
Eco47I GGWCC 3 cut(s) 203, 266, 860
Eco57I CTGAAG 1 cut(s) 548
EcoO109I RGGNCCY 1 cut(s) 203
EcoRII CCWGG 4 cut(s) 206, 288, 630, 856
EcoRV GATATC 1 cut(s) 502
EcoT22I ATGCAT 1 cut(s) 92
FaeI CATG 4 cut(s) 94, 251, 360, 469
FalI AAGNNNNNCTT 4 cut(s) 636, 668, 703, 735
FaqI GGGAC 2 cut(s) 189, 836
FatI CATG 4 cut(s) 90, 247, 356, 465
FauNDI CATATG 1 cut(s) 193
FbaI TGATCA 1 cut(s) 67
FblI GTMKAC 1 cut(s) 103
Fnu4HI GCNGC 1 cut(s) 507
FokI GGATG 4 cut(s) 99, 613, 854, 878
Fsp4HI GCNGC 1 cut(s) 507
FspBI CTAG 1 cut(s) 540
GlaI GCGC 1 cut(s) 608
GluI GCNGC 1 cut(s) 507
HaeII RGCGCY 1 cut(s) 610
HaeIII GGCC 4 cut(s) 46, 345, 401, 642
HapII CCGG 1 cut(s) 863
HhaI GCGC 1 cut(s) 609
Hin1II CATG 4 cut(s) 94, 251, 360, 469
Hin6I GCGC 1 cut(s) 607
HinP1I GCGC 1 cut(s) 607
HincII GTYRAC 1 cut(s) 104
HindII GTYRAC 1 cut(s) 104
HindIII AAGCTT 3 cut(s) 185, 446, 663
HinfI GANTC 1 cut(s) 649
HpaII CCGG 1 cut(s) 863
HphI GGTGA 1 cut(s) 575
Hpy166II GTNNAC 2 cut(s) 104, 309
Hpy188I TCNGA 3 cut(s) 67, 473, 658
Hpy188III TCNNGA 3 cut(s) 248, 526, 598
Hpy8I GTNNAC 2 cut(s) 104, 309
HpyAV CCTTC 3 cut(s) 523, 715, 729
HpyCH4III ACNGT 1 cut(s) 82
HpyCH4IV ACGT 1 cut(s) 591
HpyCH4V TGCA 8 cut(s) 4, 59, 90, 131, 234, 409, 509, 681
HpyF10VI GCNNNNNNNGC 1 cut(s) 515
HpyF3I CTNAG 5 cut(s) 41, 375, 444, 470, 763
HpySE526I ACGT 1 cut(s) 591
Hsp92II CATG 4 cut(s) 94, 251, 360, 469
HspAI GCGC 1 cut(s) 607
KflI GGGWCCC 1 cut(s) 203
Ksp22I TGATCA 1 cut(s) 67
Kzo9I GATC 4 cut(s) 67, 565, 658, 715
LmnI GCTCC 3 cut(s) 462, 528, 707
Lsp1109I GCAGC 1 cut(s) 493
LweI GCATC 2 cut(s) 25, 77
MaeI CTAG 1 cut(s) 540
MaeII ACGT 1 cut(s) 591
MaeIII GTNAC 3 cut(s) 552, 673, 766
MalI GATC 4 cut(s) 69, 567, 660, 717
MboI GATC 4 cut(s) 67, 565, 658, 715
MboII GAAGA 2 cut(s) 647, 777
MhlI GDGCHC 2 cut(s) 247, 372
MlsI TGGCCA 1 cut(s) 642
MluCI AATT 7 cut(s) 123, 229, 324, 428, 475, 781, 816
MluNI TGGCCA 1 cut(s) 642
MlyI GAGTC 1 cut(s) 643
MmeI TCCRAC 1 cut(s) 64
Mox20I TGGCCA 1 cut(s) 642
Mph1103I ATGCAT 1 cut(s) 92
MscI TGGCCA 1 cut(s) 642
MseI TTAA 3 cut(s) 228, 323, 696
Msp20I TGGCCA 1 cut(s) 642
MspI CCGG 1 cut(s) 863
MspR9I CCNGG 4 cut(s) 208, 290, 632, 858
MvaI CCWGG 4 cut(s) 208, 290, 632, 858
MwoI GCNNNNNNNGC 1 cut(s) 515
NdeI CATATG 1 cut(s) 193
NdeII GATC 4 cut(s) 67, 565, 658, 715
NlaIII CATG 4 cut(s) 94, 251, 360, 469
NlaIV GGNNCC 2 cut(s) 204, 205
NmuCI GTSAC 1 cut(s) 766
NsiI ATGCAT 1 cut(s) 92
NspI RCATGY 2 cut(s) 94, 469
PaeI GCATGC 2 cut(s) 94, 469
PagI TCATGA 1 cut(s) 247
PflMI CCANNNNNTGG 3 cut(s) 18, 341, 592
PfoI TCCNGGA 1 cut(s) 856
PkrI GCNGC 1 cut(s) 508
PleI GAGTC 1 cut(s) 643
PpsI GAGTC 1 cut(s) 643
PpuMI RGGWCCY 1 cut(s) 203
Psp5II RGGWCCY 1 cut(s) 203
Psp6I CCWGG 4 cut(s) 206, 288, 630, 856
PspGI CCWGG 4 cut(s) 206, 288, 630, 856
PspN4I GGNNCC 2 cut(s) 204, 205
PspPI GGNCC 3 cut(s) 203, 266, 860
PspPPI RGGWCCY 1 cut(s) 203
RsaI GTAC 1 cut(s) 310
RsaNI GTAC 1 cut(s) 309
SalI GTCGAC 1 cut(s) 102
SaqAI TTAA 3 cut(s) 228, 323, 696
SatI GCNGC 1 cut(s) 507
Sau3AI GATC 4 cut(s) 67, 565, 658, 715
Sau96I GGNCC 3 cut(s) 203, 266, 860
SchI GAGTC 1 cut(s) 643
ScrFI CCNGG 4 cut(s) 208, 290, 632, 858
SduI GDGCHC 2 cut(s) 247, 372
SfaNI GCATC 2 cut(s) 25, 77
SinI GGWCC 3 cut(s) 203, 266, 860
SmlI CTYRAG 1 cut(s) 182
SmoI CTYRAG 1 cut(s) 182
SphI GCATGC 2 cut(s) 94, 469
Sse9I AATT 7 cut(s) 123, 229, 324, 428, 475, 781, 816
SspMI CTAG 1 cut(s) 540
StyD4I CCNGG 4 cut(s) 206, 288, 630, 856
TaaI ACNGT 1 cut(s) 82
TaiI ACGT 1 cut(s) 594
TaqI TCGA 2 cut(s) 103, 729
TasI AATT 7 cut(s) 123, 229, 324, 428, 475, 781, 816
TatI WGTACW 1 cut(s) 308
Tru1I TTAA 3 cut(s) 228, 323, 696
Tru9I TTAA 3 cut(s) 228, 323, 696
TscAI CASTG 4 cut(s) 124, 379, 421, 775
TseFI GTSAC 1 cut(s) 766
TseI GCWGC 1 cut(s) 506
Tsp45I GTSAC 1 cut(s) 766
TspDTI ATGAA 3 cut(s) 180, 602, 697
TspRI CASTG 4 cut(s) 124, 379, 421, 775
Van91I CCANNNNNTGG 3 cut(s) 18, 341, 592
VpaK11BI GGWCC 3 cut(s) 203, 266, 860
XapI RAATTY 3 cut(s) 123, 781, 816
XceI RCATGY 2 cut(s) 94, 469
XmiI GTMKAC 1 cut(s) 103
XspI CTAG 1 cut(s) 540
Zsp2I ATGCAT 1 cut(s) 92
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.