Domain of unknown function (DUF4283)
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| RPE65 | PF03055 | 98 - 194 | 2.3e-17 | Retinal pigment epithelial membrane protein |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 474 |
| AccI | GTMKAC | 1 cut(s) | 342 |
| AccIII | TCCGGA | 1 cut(s) | 331 |
| AcsI | RAATTY | 2 cut(s) | 218, 315 |
| AcuI | CTGAAG | 1 cut(s) | 460 |
| AcyI | GRCGYC | 2 cut(s) | 195, 471 |
| AfaI | GTAC | 2 cut(s) | 74, 509 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 371, 584, 628 |
| AflIII | ACRYGT | 1 cut(s) | 520 |
| AgsI | TTSAA | 6 cut(s) | 17, 79, 169, 218, 382, 548 |
| AluBI | AGCT | 3 cut(s) | 53, 290, 544 |
| AluI | AGCT | 3 cut(s) | 53, 290, 544 |
| Alw26I | GTCTC | 1 cut(s) | 160 |
| Aor13HI | TCCGGA | 1 cut(s) | 331 |
| ApeKI | GCWGC | 1 cut(s) | 109 |
| ApoI | RAATTY | 2 cut(s) | 218, 315 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 164, 254 |
| AspS9I | GGNCC | 2 cut(s) | 356, 502 |
| AsuHPI | GGTGA | 1 cut(s) | 281 |
| AvaII | GGWCC | 2 cut(s) | 356, 502 |
| BauI | CACGAG | 1 cut(s) | 298 |
| BbsI | GAAGAC | 1 cut(s) | 466 |
| BbvCI | CCTCAGC | 1 cut(s) | 49 |
| BbvI | GCAGC | 1 cut(s) | 121 |
| BccI | CCATC | 3 cut(s) | 250, 479, 489 |
| BclI | TGATCA | 1 cut(s) | 226 |
| BcoDI | GTCTC | 1 cut(s) | 160 |
| BfaI | CTAG | 1 cut(s) | 59 |
| BisI | GCNGC | 1 cut(s) | 110 |
| BlsI | GCNGC | 1 cut(s) | 111 |
| BmcAI | AGTACT | 1 cut(s) | 74 |
| Bme18I | GGWCC | 2 cut(s) | 356, 502 |
| BmgT120I | GGNCC | 2 cut(s) | 356, 502 |
| BmrI | ACTGGG | 1 cut(s) | 257 |
| BmsI | GCATC | 2 cut(s) | 117, 312 |
| BmuI | ACTGGG | 1 cut(s) | 257 |
| BpiI | GAAGAC | 1 cut(s) | 466 |
| Bpu10I | CCTNAGC | 1 cut(s) | 49 |
| BsaAI | YACGTR | 1 cut(s) | 346 |
| BsaBI | GATNNNNATC | 1 cut(s) | 382 |
| BsaHI | GRCGYC | 2 cut(s) | 195, 471 |
| BsaJI | CCNNGG | 1 cut(s) | 93 |
| BsaWI | WCCGGW | 2 cut(s) | 331, 504 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 330, 360 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 371, 584, 628 |
| Bse118I | RCCGGY | 1 cut(s) | 598 |
| Bse1I | ACTGG | 1 cut(s) | 263 |
| Bse3DI | GCAATG | 1 cut(s) | 233 |
| Bse8I | GATNNNNATC | 1 cut(s) | 382 |
| BseAI | TCCGGA | 1 cut(s) | 331 |
| BseDI | CCNNGG | 1 cut(s) | 93 |
| BseGI | GGATG | 1 cut(s) | 132 |
| BseJI | GATNNNNATC | 1 cut(s) | 382 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 371, 584, 628 |
| BseMI | GCAATG | 1 cut(s) | 233 |
| BseMII | CTCAG | 2 cut(s) | 63, 260 |
| BseNI | ACTGG | 1 cut(s) | 263 |
| BseRI | GAGGAG | 2 cut(s) | 82, 611 |
| BseXI | GCAGC | 1 cut(s) | 121 |
| BsiSI | CCGG | 3 cut(s) | 332, 505, 599 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 371, 584, 628 |
| BsmAI | GTCTC | 1 cut(s) | 160 |
| Bsp13I | TCCGGA | 1 cut(s) | 331 |
| Bsp143I | GATC | 1 cut(s) | 226 |
| BspCNI | CTCAG | 2 cut(s) | 62, 259 |
| BspEI | TCCGGA | 1 cut(s) | 331 |
| BspHI | TCATGA | 1 cut(s) | 102 |
| BsrDI | GCAATG | 1 cut(s) | 233 |
| BsrFI | RCCGGY | 1 cut(s) | 598 |
| BsrI | ACTGG | 1 cut(s) | 263 |
| BssAI | RCCGGY | 1 cut(s) | 598 |
| BssECI | CCNNGG | 1 cut(s) | 93 |
| BssMI | GATC | 1 cut(s) | 226 |
| BssNI | GRCGYC | 2 cut(s) | 195, 471 |
| BssSI | CACGAG | 1 cut(s) | 298 |
| Bst2BI | CACGAG | 1 cut(s) | 298 |
| Bst4CI | ACNGT | 1 cut(s) | 502 |
| BstACI | GRCGYC | 2 cut(s) | 195, 471 |
| BstBAI | YACGTR | 1 cut(s) | 346 |
| BstC8I | GCNNGC | 1 cut(s) | 600 |
| BstDEI | CTNAG | 2 cut(s) | 49, 246 |
| BstF5I | GGATG | 1 cut(s) | 132 |
| BstKTI | GATC | 1 cut(s) | 229 |
| BstMAI | GTCTC | 1 cut(s) | 160 |
| BstMBI | GATC | 1 cut(s) | 226 |
| BstNSI | RCATGY | 1 cut(s) | 524 |
| BstSNI | TACGTA | 1 cut(s) | 346 |
| BstV1I | GCAGC | 1 cut(s) | 121 |
| BstV2I | GAAGAC | 1 cut(s) | 466 |
| BtsCI | GGATG | 1 cut(s) | 132 |
| BtsI | GCAGTG | 1 cut(s) | 487 |
| BtsIMutI | CAGTG | 1 cut(s) | 487 |
| Cac8I | GCNNGC | 1 cut(s) | 600 |
| CciI | TCATGA | 1 cut(s) | 102 |
| Cfr10I | RCCGGY | 1 cut(s) | 598 |
| Cfr13I | GGNCC | 2 cut(s) | 356, 502 |
| CpoI | CGGWCCG | 1 cut(s) | 502 |
| CseI | GACGC | 1 cut(s) | 203 |
| Csp6I | GTAC | 2 cut(s) | 73, 508 |
| CspI | CGGWCCG | 1 cut(s) | 502 |
| CviAII | CATG | 4 cut(s) | 103, 439, 446, 521 |
| CviJI | RGCY | 8 cut(s) | 46, 53, 98, 112, 290, 544, 565, 602 |
| CviKI_1 | RGCY | 8 cut(s) | 46, 53, 98, 112, 290, 544, 565, 602 |
| CviQI | GTAC | 2 cut(s) | 73, 508 |
| DdeI | CTNAG | 2 cut(s) | 49, 246 |
| DpnI | GATC | 1 cut(s) | 228 |
| DpnII | GATC | 1 cut(s) | 226 |
| Eco105I | TACGTA | 1 cut(s) | 346 |
| Eco47I | GGWCC | 2 cut(s) | 356, 502 |
| Eco57I | CTGAAG | 1 cut(s) | 460 |
| EcoRI | GAATTC | 2 cut(s) | 218, 315 |
| EcoT22I | ATGCAT | 1 cut(s) | 147 |
| FaeI | CATG | 4 cut(s) | 106, 442, 449, 524 |
| FatI | CATG | 4 cut(s) | 102, 438, 445, 520 |
| FbaI | TGATCA | 1 cut(s) | 226 |
| FblI | GTMKAC | 1 cut(s) | 342 |
| Fnu4HI | GCNGC | 1 cut(s) | 110 |
| FokI | GGATG | 1 cut(s) | 139 |
| Fsp4HI | GCNGC | 1 cut(s) | 110 |
| FspBI | CTAG | 1 cut(s) | 59 |
| GluI | GCNGC | 1 cut(s) | 110 |
| HapII | CCGG | 3 cut(s) | 332, 505, 599 |
| HgaI | GACGC | 1 cut(s) | 203 |
| Hin1I | GRCGYC | 2 cut(s) | 195, 471 |
| Hin1II | CATG | 4 cut(s) | 106, 442, 449, 524 |
| HindIII | AAGCTT | 1 cut(s) | 542 |
| HinfI | GANTC | 3 cut(s) | 206, 339, 593 |
| HpaII | CCGG | 3 cut(s) | 332, 505, 599 |
| HphI | GGTGA | 1 cut(s) | 281 |
| Hpy166II | GTNNAC | 1 cut(s) | 343 |
| Hpy188I | TCNGA | 3 cut(s) | 36, 249, 311 |
| Hpy188III | TCNNGA | 7 cut(s) | 79, 103, 157, 169, 298, 320, 332 |
| Hpy8I | GTNNAC | 1 cut(s) | 343 |
| Hpy99I | CGWCG | 2 cut(s) | 391, 473 |
| HpyAV | CCTTC | 6 cut(s) | 117, 278, 399, 422, 428, 576 |
| HpyCH4III | ACNGT | 1 cut(s) | 502 |
| HpyCH4IV | ACGT | 2 cut(s) | 345, 471 |
| HpyCH4V | TGCA | 3 cut(s) | 130, 145, 277 |
| HpyF3I | CTNAG | 2 cut(s) | 49, 246 |
| HpySE526I | ACGT | 2 cut(s) | 345, 471 |
| Hsp92I | GRCGYC | 2 cut(s) | 195, 471 |
| Hsp92II | CATG | 4 cut(s) | 106, 442, 449, 524 |
| Kpn2I | TCCGGA | 1 cut(s) | 331 |
| KroI | GCCGGC | 1 cut(s) | 598 |
| KroNI | GCCGGC | 1 cut(s) | 600 |
| Ksp22I | TGATCA | 1 cut(s) | 226 |
| Kzo9I | GATC | 1 cut(s) | 226 |
| LmnI | GCTCC | 1 cut(s) | 287 |
| LpnPI | CCDG | 6 cut(s) | 276, 333, 345, 518, 591, 612 |
| Lsp1109I | GCAGC | 1 cut(s) | 121 |
| LweI | GCATC | 2 cut(s) | 117, 312 |
| MaeI | CTAG | 1 cut(s) | 59 |
| MaeII | ACGT | 2 cut(s) | 345, 471 |
| MalI | GATC | 1 cut(s) | 228 |
| MboI | GATC | 1 cut(s) | 226 |
| MboII | GAAGA | 5 cut(s) | 157, 262, 324, 466, 475 |
| MluCI | AATT | 5 cut(s) | 22, 218, 272, 315, 625 |
| MlyI | GAGTC | 2 cut(s) | 348, 587 |
| MmeI | TCCRAC | 1 cut(s) | 171 |
| MnlI | CCTC | 5 cut(s) | 58, 103, 328, 368, 632 |
| Mph1103I | ATGCAT | 1 cut(s) | 147 |
| MroI | TCCGGA | 1 cut(s) | 331 |
| MroNI | GCCGGC | 1 cut(s) | 598 |
| MroXI | GAANNNNTTC | 2 cut(s) | 164, 254 |
| MslI | CAYNNNNRTG | 1 cut(s) | 150 |
| MspA1I | CMGCKG | 1 cut(s) | 53 |
| MspI | CCGG | 3 cut(s) | 332, 505, 599 |
| NaeI | GCCGGC | 1 cut(s) | 600 |
| NdeII | GATC | 1 cut(s) | 226 |
| NgoMIV | GCCGGC | 1 cut(s) | 598 |
| NlaIII | CATG | 4 cut(s) | 106, 442, 449, 524 |
| NmeAIII | GCCGAG | 1 cut(s) | 74 |
| NsiI | ATGCAT | 1 cut(s) | 147 |
| NspI | RCATGY | 1 cut(s) | 524 |
| PagI | TCATGA | 1 cut(s) | 102 |
| PciI | ACATGT | 1 cut(s) | 520 |
| PdiI | GCCGGC | 1 cut(s) | 600 |
| PdmI | GAANNNNTTC | 2 cut(s) | 164, 254 |
| PfeI | GAWTC | 1 cut(s) | 206 |
| PkrI | GCNGC | 1 cut(s) | 111 |
| PleI | GAGTC | 2 cut(s) | 347, 587 |
| PpsI | GAGTC | 2 cut(s) | 347, 587 |
| Ppu21I | YACGTR | 1 cut(s) | 346 |
| PscI | ACATGT | 1 cut(s) | 520 |
| PspPI | GGNCC | 2 cut(s) | 356, 502 |
| PvuII | CAGCTG | 1 cut(s) | 53 |
| RsaI | GTAC | 2 cut(s) | 74, 509 |
| RsaNI | GTAC | 2 cut(s) | 73, 508 |
| RseI | CAYNNNNRTG | 1 cut(s) | 150 |
| Rsr2I | CGGWCCG | 1 cut(s) | 502 |
| RsrII | CGGWCCG | 1 cut(s) | 502 |
| SatI | GCNGC | 1 cut(s) | 110 |
| Sau3AI | GATC | 1 cut(s) | 226 |
| Sau96I | GGNCC | 2 cut(s) | 356, 502 |
| ScaI | AGTACT | 1 cut(s) | 74 |
| SchI | GAGTC | 2 cut(s) | 348, 587 |
| SetI | ASST | 6 cut(s) | 55, 292, 348, 410, 474, 546 |
| SfaNI | GCATC | 2 cut(s) | 117, 312 |
| SinI | GGWCC | 2 cut(s) | 356, 502 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 150 |
| SnaBI | TACGTA | 1 cut(s) | 346 |
| Sse9I | AATT | 5 cut(s) | 22, 218, 272, 315, 625 |
| SspI | AATATT | 1 cut(s) | 67 |
| SspMI | CTAG | 1 cut(s) | 59 |
| TaaI | ACNGT | 1 cut(s) | 502 |
| TaiI | ACGT | 2 cut(s) | 348, 474 |
| TaqI | TCGA | 3 cut(s) | 158, 386, 525 |
| TasI | AATT | 5 cut(s) | 22, 218, 272, 315, 625 |
| TatI | WGTACW | 1 cut(s) | 72 |
| TfiI | GAWTC | 1 cut(s) | 206 |
| TscAI | CASTG | 1 cut(s) | 487 |
| TseI | GCWGC | 1 cut(s) | 109 |
| TspDTI | ATGAA | 3 cut(s) | 119, 211, 434 |
| TspRI | CASTG | 1 cut(s) | 487 |
| VpaK11BI | GGWCC | 2 cut(s) | 356, 502 |
| XapI | RAATTY | 2 cut(s) | 218, 315 |
| XceI | RCATGY | 1 cut(s) | 524 |
| XmiI | GTMKAC | 1 cut(s) | 342 |
| XmnI | GAANNNNTTC | 2 cut(s) | 164, 254 |
| XspI | CTAG | 1 cut(s) | 59 |
| ZraI | GACGTC | 1 cut(s) | 472 |
| ZrmI | AGTACT | 1 cut(s) | 74 |
| Zsp2I | ATGCAT | 1 cut(s) | 147 |