Rorug03G0311100

Domain of unknown function (DUF4283)

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000003
Physical Location & Seq
Forward (+)
33189533 .. 33192391
2859 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug03G0311100.1

Sequence Viewer

Length: 1071 bp
ATGTCGCTGCTCTCAGATCTCATAAACCTTGACCTCTCAGACACCACTAAGAAGATCATCGCAGAGTACATATGGGTTGGCGGATCTGGTATGGATCTCAGAAGCAAAGCAAGGACTCTGCCAGGACCTGTTAGTGACCCCTCAAAACTCCCCAAATGGAATTACGATGGATCCAGCACAGGTCAAGCTCCAGGGGAAGACAGTGAAGTCATCCTATACCCTCAAGCCATTTTCAAGGACCCATTTAGGAGAGGCAACAATATCTTGGTTATGTGTGATGCTTATACTCCGGCTGGAGAACCAATTCCAACAAACAAGAGATGTACTGCAGCAAAGATATTCAGCCATCCTAATGTTGTTGCTGAAGTGCCCTGGTATGGTCTGGAACAGGAGTACACCTTGTTGCAGAAAGATGTCAATTGGCCATTGGGATGGCCAATTGGTGGTTTTCCTGGTCCTCAGGGACCGTACTACTGTGCTGCCGGCGCTGACAAAGCATTTGGGCGTGACATTGTTGATTCTCATTACAAGGCCTGCTTGTATGCAGGCATCAACATCAGTGGCATCAACGGTGAAGTCATGCCAGGCCAGTGGGAGTTTCAAGTTGGTCCTTCAGTTGGCATCTCTGCGGGTGATGAATTATGGGTTGCTCGTTATATTTTGGAGAGGATCACAGAGATTGCTGGGGTGGTTCTTTCGTTTGATCCCAAGCCAATCCCTGGTGATTGGAACGGAGCTGGGGCTCACACAAATTACAGTACCAAATCCATGAGACACGAAGGAGGCTATGAAATTATCAAGAAAGCAATTGAGAAGCTGGGACTAAGGCACAAAGAACACATTGCTGCATATGGAGAAGGCAATGAACGCCGTTTGACCGGAAAACATGAAACAGCCGACATTAACACCTTCAAATGGGGTGTTGCGGACCGTGGTGCCTCCATCCGCGTTGGTCGTGACACAGAGAAAGAAGGCAAGGGCTATTTTGAGGACAGGAGGCCTGCTTCGAACATGGATCCATATGTGGTGACTTCTATGATTGCCGAGACCACTATTCTGTGGAAGCCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

356

Amino Acids

39.18

Weight (kDa)

5.87

Isoelectric Point (pI)

38.68

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Gln-synt_N PF03951 52 - 97 1.7e-08 Glutamine synthetase, beta-Grasp domain
Gln-synt_C PF00120 127 - 347 4.3e-12 Glutamine synthetase, catalytic domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000044)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G07760 AT5G28823
fragaria_vesca FvH4_1g13572 FvH4_2g03281 FvH4_2g04691 FvH4_2g08332 FvH4_2g08333 FvH4_2g15313 FvH4_2g26101 FvH4_2g29541 FvH4_3g06911 FvH4_3g34351 FvH4_3g43733 FvH4_4g02432 FvH4_4g05601 FvH4_4g08213 FvH4_4g09961 FvH4_4g10131 FvH4_4g20001 FvH4_4g20002 FvH4_5g01051 FvH4_5g01401 FvH4_5g27943 FvH4_6g09220 FvH4_6g17383 FvH4_6g35491 FvH4_6g46421 FvH4_7g04151 FvH4_7g13962 FvH4_7g18611 FvH4_7g19491 FvH4_7g19511 FvH4_7g26562
malus_domestica MD06G1221600.v1.1
pyrus_communis pycom10g21150
rosa_chinensis RchiOBHm_Chr1g0337571 RchiOBHm_Chr2g0168771 RchiOBHm_Chr3g0453631 RchiOBHm_Chr6g0278581
rosa_laevigata RLG00000001899 RLG00000001925 RLG00000002026 RLG00000003410 RLG00000003767 RLG00000004304 RLG00000004473 RLG00000004677 RLG00000006856 RLG00000007994 RLG00000009888 RLG00000011627 RLG00000012174 RLG00000012217 RLG00000013118 RLG00000013736 RLG00000014194 RLG00000014251 RLG00000015011 RLG00000015057 RLG00000015235 RLG00000017416 RLG00000018052 RLG00000018537 RLG00000019968 RLG00000020096 RLG00000020263 RLG00000022606 RLG00000023119 RLG00000028111 RLG00000029686 RLG00000030126 RLG00000031124 RLG00000031236 RLG00000032766 RLG00000033171 RLG00000033548 RLG00000033987 RLG00000034062 RLG00000035115 RLG00000035863
rosa_multiflora Rmu_co8036712.1_g000001 Rmu_co8080248.1_g000001 Rmu_co8208334.1_g000001 Rmu_co8253451.1_g000001 Rmu_co8393241.1_g000001 Rmu_co8522225.1_g000005 Rmu_sc0000060.1_g000030 Rmu_sc0000060.1_g000031 Rmu_sc0000060.1_g000032 Rmu_sc0000090.1_g000008 Rmu_sc0000149.1_g000051 Rmu_sc0000149.1_g000058 Rmu_sc0000309.1_g000050 Rmu_sc0000370.1_g000022 Rmu_sc0000370.1_g000023 Rmu_sc0000370.1_g000024 Rmu_sc0000418.1_g000018 Rmu_sc0000427.1_g000014 Rmu_sc0000427.1_g000015 Rmu_sc0000434.1_g000008 Rmu_sc0000487.1_g000038 Rmu_sc0000487.1_g000039 Rmu_sc0000569.1_g000029 Rmu_sc0000580.1_g000097 Rmu_sc0000595.1_g000068 Rmu_sc0000607.1_g000027 Rmu_sc0000738.1_g000004 Rmu_sc0000758.1_g000001 Rmu_sc0000758.1_g000002 Rmu_sc0000870.1_g000019 Rmu_sc0000924.1_g000040 Rmu_sc0000924.1_g000041 Rmu_sc0000999.1_g000037 Rmu_sc0001001.1_g000001 Rmu_sc0001010.1_g000080 Rmu_sc0001075.1_g000041 Rmu_sc0001097.1_g000016 Rmu_sc0001173.1_g000020 Rmu_sc0001258.1_g000010 Rmu_sc0001425.1_g000031 Rmu_sc0001493.1_g000020 Rmu_sc0001493.1_g000021 Rmu_sc0001644.1_g000024 Rmu_sc0001648.1_g000039 Rmu_sc0001662.1_g000002 Rmu_sc0001849.1_g000046 Rmu_sc0001851.1_g000038 Rmu_sc0001861.1_g000006 Rmu_sc0001899.1_g000008 Rmu_sc0002231.1_g000023 Rmu_sc0002393.1_g000012 Rmu_sc0002515.1_g000010 Rmu_sc0002551.1_g000013 Rmu_sc0002680.1_g000029 Rmu_sc0002700.1_g000030 Rmu_sc0002700.1_g000031 Rmu_sc0002709.1_g000035 Rmu_sc0002779.1_g000017 Rmu_sc0003267.1_g000040 Rmu_sc0003306.1_g000009 Rmu_sc0003338.1_g000014 Rmu_sc0003522.1_g000038 Rmu_sc0003522.1_g000039 Rmu_sc0003653.1_g000031 Rmu_sc0003901.1_g000003 Rmu_sc0003920.1_g000009 Rmu_sc0004014.1_g000009 Rmu_sc0004016.1_g000013 Rmu_sc0004031.1_g000002 Rmu_sc0004106.1_g000001 Rmu_sc0004432.1_g000004 Rmu_sc0004481.1_g000020 Rmu_sc0004874.1_g000005 Rmu_sc0004928.1_g000005 Rmu_sc0005065.1_g000053 Rmu_sc0005091.1_g000005 Rmu_sc0005217.1_g000015 Rmu_sc0005242.1_g000002 Rmu_sc0005300.1_g000011 Rmu_sc0005400.1_g000004 Rmu_sc0005486.1_g000007 Rmu_sc0005527.1_g000015 Rmu_sc0006059.1_g000021 Rmu_sc0006087.1_g000004 Rmu_sc0006184.1_g000006 Rmu_sc0006184.1_g000007 Rmu_sc0006578.1_g000006 Rmu_sc0006730.1_g000010 Rmu_sc0006736.1_g000030 Rmu_sc0006736.1_g000033 Rmu_sc0007333.1_g000018 Rmu_sc0007856.1_g000010 Rmu_sc0008231.1_g000003 Rmu_sc0009862.1_g000012 Rmu_sc0010547.1_g000001 Rmu_sc0010547.1_g000003 Rmu_sc0010632.1_g000012 Rmu_sc0010747.1_g000008 Rmu_sc0011075.1_g000009 Rmu_sc0011565.1_g000004 Rmu_sc0011641.1_g000003 Rmu_sc0013102.1_g000013 Rmu_sc0013160.1_g000006 Rmu_sc0014846.1_g000004 Rmu_sc0017037.1_g000003 Rmu_sc0018203.1_g000001 Rmu_sc0018204.1_g000001 Rmu_sc0018348.1_g000001 Rmu_sc0019354.1_g000002 Rmu_sc0021630.1_g000002 Rmu_sc0022987.1_g000002 Rmu_sc0024469.1_g000005 Rmu_sc0033519.1_g000001 Rmu_sc0033519.1_g000002 Rmu_sc0033519.1_g000003 Rmu_sc0042775.1_g000001 Rmu_ssc0000110.1_g000003 Rmu_ssc0000110.1_g000004 Rmu_ssc0000126.1_g000068 Rmu_ssc0000200.1_g000007 Rmu_ssc0000295.1_g000003 Rmu_ssc0000295.1_g000004 Rmu_ssc0000299.1_g000010 Rmu_ssc0000308.1_g000024 Rmu_ssc0000339.1_g000006 Rmu_ssc0000385.1_g000012 Rmu_ssc0000409.1_g000004 Rmu_ssc0000421.1_g000004
rosa_roxburghii Rroxscaffold_156G00440360 Rroxscaffold_166G00440800 Rroxscaffold_1G00039040 Rroxscaffold_1G00039050 Rroxscaffold_1G00073950 Rroxscaffold_2G00091710 Rroxscaffold_2G00120050 Rroxscaffold_2G00122590 Rroxscaffold_3G00219700 Rroxscaffold_3G00264140 Rroxscaffold_4G00290600 Rroxscaffold_4G00323610 Rroxscaffold_4G00328460 Rroxscaffold_5G00343440 Rroxscaffold_5G00343570 Rroxscaffold_5G00378540 Rroxscaffold_5G00385090 Rroxscaffold_7G00169130 Rroxscaffold_7G00216420
rosa_rugosa Rorug01G0065800 Rorug01G0073500 Rorug01G0091700 Rorug01G0096500 Rorug01G0204700.1 Rorug01G0249100 Rorug01G0333800 Rorug01G0333900 Rorug01G0339500 Rorug01G0431300 Rorug02G0085400 Rorug02G0117500 Rorug02G0130900 Rorug02G0178800 Rorug02G0226700 Rorug02G0336300 Rorug02G0338700 Rorug02G0351400 Rorug02G0459900 Rorug03G0187000 Rorug03G0223700 Rorug03G0291300 Rorug03G0291300 Rorug03G0311100 Rorug03G0316900 Rorug03G0346000 Rorug04G0014500 Rorug04G0014600 Rorug04G0124100 Rorug04G0136500 Rorug04G0302000 Rorug04G0338100 Rorug04G0338200 Rorug04G0413100 Rorug05G0182200 Rorug05G0226500 Rorug05G0273300 Rorug05G0292200 Rorug05G0292200 Rorug05G0392500 Rorug05G0394500 Rorug05G0394600 Rorug05G0505600.1 Rorug06G0351400 Rorug06G0393400 Rorug06G0393600 Rorug06G0470000 Rorug07G0063100 Rorug07G0086800 Rorug07G0109200 Rorug07G0236100
rosa_samantha Rh1AG010800 Rh1AG011100 Rh1AG064900 Rh1AG088000 Rh1AG207100 Rh1AG262000 Rh1AG300800 Rh1BG043000 Rh1BG144600 Rh1BG180700 Rh1BG180800 Rh1BG328800 Rh1BG399400 Rh1CG041400 Rh1CG047300 Rh1CG379700 Rh1DG036500 Rh1DG083000 Rh1DG210700 Rh1DG210800 Rh1DG231100 Rh2AG007900 Rh2AG055500 Rh2AG339100 Rh2AG368100 Rh2BG243300 Rh2BG258900 Rh2BG292000 Rh2BG333500 Rh2BG387300 Rh2BG612800 Rh2BG619100 Rh2CG026500 Rh2CG163600 Rh2CG535700 Rh2DG186400 Rh2DG235000 Rh2DG314500 Rh2DG388500 Rh2DG391400 Rh2DG496900 Rh2DG526700 Rh2DG570700 Rh3AG330700 Rh3BG266900 Rh3CG236000 Rh3CG340400 Rh3DG090000 Rh3DG278400 Rh3DG297600 Rh3DG362600 Rh4AG001300 Rh4AG023300 Rh4AG097100 Rh4AG427000 Rh4BG029400 Rh4BG032400 Rh4BG086000 Rh4BG249200 Rh4CG001900 Rh4CG040600 Rh4CG093000 Rh4CG106300 Rh4CG113200 Rh4CG113900 Rh4DG002300 Rh4DG144400 Rh4DG234200 Rh5AG043700 Rh5AG084900 Rh5AG161500 Rh5AG409000 Rh5AG457200 Rh5AG457900 Rh5AG473700 Rh5AG520600 Rh5BG042100 Rh5BG124100 Rh5BG323500 Rh5BG417200 Rh5BG443700 Rh5BG451500 Rh5BG464900 Rh5BG470400 Rh5BG522500 Rh5CG068800 Rh5CG178300 Rh5CG231000 Rh5CG258600 Rh5CG394500 Rh5CG473700 Rh5DG164700 Rh5DG235400 Rh5DG261300 Rh5DG304900 Rh5DG334500 Rh5DG424300 Rh5DG458400 Rh5DG478600 Rh5DG552300 Rh5DG552700 Rh6AG037000 Rh6AG042100 Rh6AG255500 Rh6AG283400 Rh6AG291800 Rh6BG049600 Rh6BG080700 Rh6BG114600 Rh6BG128900 Rh6BG352500 Rh6CG052400 Rh6CG112900 Rh6CG113000 Rh6CG131300 Rh6CG157700 Rh6CG243200 Rh6CG254100 Rh6CG275700 Rh6CG299700 Rh6CG309100 Rh6CG317600 Rh6CG342600 Rh6CG471900 Rh6DG038200 Rh6DG102300 Rh6DG114400 Rh6DG225900 Rh6DG292900 Rh6DG320700 Rh6DG512800 Rh7AG217700 Rh7AG313900 Rh7AG446000 Rh7AG472600 Rh7BG223100 Rh7BG349900 Rh7BG352000 Rh7CG160200 Rh7CG233900 Rh7CG242700 Rh7CG273900 Rh7CG306400 Rh7CG322200 Rh7DG053800 Rh7DG077800 Rh7DG227700 Rh7DG404800
rosa_wichuraiana Rw0G003990 Rw2G022110 Rw2G024890 Rw6G005700 Rw7G008770

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 206
AccB1I GGYRCC 1 cut(s) 935
AccB7I CCANNNNNTGG 2 cut(s) 443, 719
AccII CGCG 1 cut(s) 948
AciI CCGC 4 cut(s) 81, 629, 926, 946
AclWI GGATC 8 cut(s) 91, 102, 165, 178, 677, 698, 1010, 1023
AcoI YGGCCR 2 cut(s) 422, 434
AcuI CTGAAG 2 cut(s) 384, 597
AfaI GTAC 5 cut(s) 68, 325, 395, 470, 760
AfiI CCNNNNNNNGG 5 cut(s) 377, 443, 617, 719, 915
AgsI TTSAA 3 cut(s) 235, 602, 913
AjnI CCWGG 6 cut(s) 121, 190, 371, 451, 583, 718
AluBI AGCT 3 cut(s) 188, 737, 817
AluI AGCT 3 cut(s) 188, 737, 817
Alw26I GTCTC 2 cut(s) 766, 1040
AlwI GGATC 8 cut(s) 91, 102, 165, 178, 677, 698, 1010, 1023
AlwNI CAGNNNCTG 1 cut(s) 128
AoxI GGCC 5 cut(s) 422, 434, 531, 586, 998
ApeKI GCWGC 4 cut(s) 7, 329, 479, 845
ArsI GACNNNNNNTTYG 2 cut(s) 482, 514
Asp700I GAANNNNTTC 1 cut(s) 303
AspLEI GCGC 1 cut(s) 488
AspS9I GGNCC 6 cut(s) 125, 238, 455, 464, 608, 928
AsuHPI GGTGA 4 cut(s) 584, 644, 734, 1039
AsuII TTCGAA 1 cut(s) 1007
AvaII GGWCC 6 cut(s) 125, 238, 455, 464, 608, 928
AxyI CCTNAGG 1 cut(s) 459
BaeGI GKGCMC 1 cut(s) 372
BalI TGGCCA 2 cut(s) 424, 436
BamHI GGATCC 2 cut(s) 170, 1015
BanI GGYRCC 1 cut(s) 935
BanII GRGCYC 1 cut(s) 745
BbsI GAAGAC 1 cut(s) 204
BbvI GCAGC 3 cut(s) 341, 466, 832
BccI CCATC 4 cut(s) 161, 354, 426, 950
BceAI ACGGC 1 cut(s) 855
BciT130I CCWGG 6 cut(s) 123, 192, 373, 453, 585, 720
BcoDI GTCTC 2 cut(s) 766, 1040
BfmI CTRYAG 1 cut(s) 327
BfoI RGCGCY 1 cut(s) 489
BglII AGATCT 1 cut(s) 16
BisI GCNGC 4 cut(s) 8, 330, 480, 846
BlsI GCNGC 4 cut(s) 9, 331, 481, 847
Bme1390I CCNGG 6 cut(s) 123, 192, 373, 453, 585, 720
Bme18I GGWCC 6 cut(s) 125, 238, 455, 464, 608, 928
BmgT120I GGNCC 6 cut(s) 125, 238, 455, 464, 608, 928
BmiI GGNNCC 5 cut(s) 172, 240, 465, 937, 1017
BmrFI CCNGG 6 cut(s) 123, 192, 373, 453, 585, 720
BmsI GCATC 4 cut(s) 268, 558, 573, 630
BpiI GAAGAC 1 cut(s) 204
BpmI CTGGAG 2 cut(s) 174, 315
Bpu14I TTCGAA 1 cut(s) 1007
BpuEI CTTGAG 1 cut(s) 207
BsaI GGTCTC 1 cut(s) 1040
BsaJI CCNNGG 4 cut(s) 191, 371, 718, 931
BsaWI WCCGGW 1 cut(s) 878
Bsc4I CCNNNNNNNGG 5 cut(s) 377, 443, 617, 719, 915
Bse118I RCCGGY 1 cut(s) 482
Bse1I ACTGG 1 cut(s) 589
Bse21I CCTNAGG 1 cut(s) 459
Bse3DI GCAATG 2 cut(s) 840, 868
BseBI CCWGG 6 cut(s) 123, 192, 373, 453, 585, 720
BseDI CCNNGG 4 cut(s) 191, 371, 718, 931
BseGI GGATG 4 cut(s) 210, 346, 437, 942
BseLI CCNNNNNNNGG 5 cut(s) 377, 443, 617, 719, 915
BseMI GCAATG 2 cut(s) 840, 868
BseMII CTCAG 4 cut(s) 27, 51, 112, 473
BseNI ACTGG 1 cut(s) 589
BseSI GKGCMC 1 cut(s) 372
BseXI GCAGC 3 cut(s) 341, 466, 832
BseYI CCCAGC 3 cut(s) 683, 737, 817
Bsh1236I CGCG 1 cut(s) 948
BshFI GGCC 5 cut(s) 424, 436, 533, 588, 1000
BshNI GGYRCC 1 cut(s) 935
BsiSI CCGG 3 cut(s) 290, 483, 879
BslFI GGGAC 2 cut(s) 477, 834
BslI CCNNNNNNNGG 5 cut(s) 377, 443, 617, 719, 915
BsmAI GTCTC 2 cut(s) 766, 1040
BsmFI GGGAC 2 cut(s) 477, 834
BsnI GGCC 5 cut(s) 424, 436, 533, 588, 1000
Bso31I GGTCTC 1 cut(s) 1040
Bsp119I TTCGAA 1 cut(s) 1007
Bsp1286I GDGCHC 2 cut(s) 372, 745
Bsp143I GATC 8 cut(s) 16, 54, 83, 94, 170, 669, 703, 1015
BspACI CCGC 4 cut(s) 81, 629, 926, 946
BspANI GGCC 5 cut(s) 424, 436, 533, 588, 1000
BspCNI CTCAG 4 cut(s) 26, 50, 111, 472
BspFNI CGCG 1 cut(s) 948
BspLI GGNNCC 5 cut(s) 172, 240, 465, 937, 1017
BspMAI CTGCAG 1 cut(s) 331
BspPI GGATC 8 cut(s) 91, 102, 165, 178, 677, 698, 1010, 1023
BspT104I TTCGAA 1 cut(s) 1007
BspT107I GGYRCC 1 cut(s) 935
BspTNI GGTCTC 1 cut(s) 1040
BsrDI GCAATG 2 cut(s) 840, 868
BsrFI RCCGGY 1 cut(s) 482
BsrI ACTGG 1 cut(s) 589
BssAI RCCGGY 1 cut(s) 482
BssECI CCNNGG 4 cut(s) 191, 371, 718, 931
BssMI GATC 8 cut(s) 16, 54, 83, 94, 170, 669, 703, 1015
Bst2UI CCWGG 6 cut(s) 123, 192, 373, 453, 585, 720
Bst4CI ACNGT 6 cut(s) 203, 468, 476, 572, 758, 932
BstBI TTCGAA 1 cut(s) 1007
BstC8I GCNNGC 4 cut(s) 484, 535, 547, 1002
BstDEI CTNAG 6 cut(s) 13, 37, 48, 98, 459, 824
BstDSI CCRYGG 1 cut(s) 931
BstF5I GGATG 4 cut(s) 210, 346, 437, 942
BstFNI CGCG 1 cut(s) 948
BstH2I RGCGCY 1 cut(s) 489
BstHHI GCGC 1 cut(s) 488
BstKTI GATC 8 cut(s) 19, 57, 86, 97, 173, 672, 706, 1018
BstMAI GTCTC 2 cut(s) 766, 1040
BstMBI GATC 8 cut(s) 16, 54, 83, 94, 170, 669, 703, 1015
BstMWI GCNNNNNNNGC 3 cut(s) 485, 494, 867
BstNI CCWGG 6 cut(s) 123, 192, 373, 453, 585, 720
BstSCI CCNGG 6 cut(s) 121, 190, 371, 451, 583, 718
BstSFI CTRYAG 1 cut(s) 327
BstSLI GKGCMC 1 cut(s) 372
BstUI CGCG 1 cut(s) 948
BstV1I GCAGC 3 cut(s) 341, 466, 832
BstV2I GAAGAC 1 cut(s) 204
BstX2I RGATCY 5 cut(s) 16, 83, 94, 170, 1015
BstXI CCANNNNNNTGG 2 cut(s) 432, 591
BstYI RGATCY 5 cut(s) 16, 83, 94, 170, 1015
Bsu36I CCTNAGG 1 cut(s) 459
BsuRI GGCC 5 cut(s) 424, 436, 533, 588, 1000
BtgI CCRYGG 1 cut(s) 931
BtgZI GCGATG 1 cut(s) 43
BtsCI GGATG 4 cut(s) 210, 346, 437, 942
BtsIMutI CAGTG 3 cut(s) 208, 565, 596
Cac8I GCNNGC 4 cut(s) 484, 535, 547, 1002
CaiI CAGNNNCTG 1 cut(s) 128
CfoI GCGC 1 cut(s) 488
Cfr10I RCCGGY 1 cut(s) 482
Cfr13I GGNCC 6 cut(s) 125, 238, 455, 464, 608, 928
CpoI CGGWCCG 1 cut(s) 928
Csp6I GTAC 5 cut(s) 67, 324, 394, 469, 759
CspCI CAANNNNNGTGG 2 cut(s) 541, 576
CspI CGGWCCG 1 cut(s) 928
CviAII CATG 4 cut(s) 580, 769, 887, 1012
CviQI GTAC 5 cut(s) 67, 324, 394, 469, 759
DdeI CTNAG 6 cut(s) 13, 37, 48, 98, 459, 824
DpnI GATC 8 cut(s) 18, 56, 85, 96, 172, 671, 705, 1017
DpnII GATC 8 cut(s) 16, 54, 83, 94, 170, 669, 703, 1015
DrdI GACNNNNNNGTC 1 cut(s) 206
DseDI GACNNNNNNGTC 1 cut(s) 206
EaeI YGGCCR 2 cut(s) 422, 434
EciI GGCGGA 1 cut(s) 96
Eco147I AGGCCT 2 cut(s) 533, 1000
Eco24I GRGCYC 1 cut(s) 745
Eco31I GGTCTC 1 cut(s) 1040
Eco47I GGWCC 6 cut(s) 125, 238, 455, 464, 608, 928
Eco57I CTGAAG 2 cut(s) 384, 597
Eco81I CCTNAGG 1 cut(s) 459
EcoO109I RGGNCCY 2 cut(s) 125, 238
EcoRII CCWGG 6 cut(s) 121, 190, 371, 451, 583, 718
EcoT38I GRGCYC 1 cut(s) 745
FaeI CATG 4 cut(s) 583, 772, 890, 1015
FalI AAGNNNNNCTT 2 cut(s) 521, 553
FaqI GGGAC 2 cut(s) 477, 834
FatI CATG 4 cut(s) 579, 768, 886, 1011
FauI CCCGC 1 cut(s) 622
FauNDI CATATG 3 cut(s) 71, 850, 1021
Fnu4HI GCNGC 4 cut(s) 8, 330, 480, 846
FokI GGATG 4 cut(s) 197, 333, 444, 929
FriOI GRGCYC 1 cut(s) 745
Fsp4HI GCNGC 4 cut(s) 8, 330, 480, 846
GlaI GCGC 1 cut(s) 487
GluI GCNGC 4 cut(s) 8, 330, 480, 846
GsaI CCCAGC 3 cut(s) 687, 741, 821
GsuI CTGGAG 2 cut(s) 174, 315
HaeII RGCGCY 1 cut(s) 489
HaeIII GGCC 5 cut(s) 424, 436, 533, 588, 1000
HapII CCGG 3 cut(s) 290, 483, 879
HhaI GCGC 1 cut(s) 488
Hin1II CATG 4 cut(s) 583, 772, 890, 1015
Hin6I GCGC 1 cut(s) 486
HinP1I GCGC 1 cut(s) 486
HinfI GANTC 2 cut(s) 115, 518
HpaII CCGG 3 cut(s) 290, 483, 879
HphI GGTGA 4 cut(s) 584, 644, 734, 1039
Hpy166II GTNNAC 1 cut(s) 396
Hpy188I TCNGA 3 cut(s) 16, 40, 101
Hpy188III TCNNGA 3 cut(s) 383, 799, 956
Hpy8I GTNNAC 1 cut(s) 396
HpyAV CCTTC 5 cut(s) 621, 773, 851, 919, 965
HpyCH4III ACNGT 6 cut(s) 203, 468, 476, 572, 758, 932
HpyCH4V TGCA 4 cut(s) 329, 406, 545, 848
HpyF10VI GCNNNNNNNGC 3 cut(s) 485, 494, 867
HpyF3I CTNAG 6 cut(s) 13, 37, 48, 98, 459, 824
Hsp92II CATG 4 cut(s) 583, 772, 890, 1015
HspAI GCGC 1 cut(s) 486
KroI GCCGGC 1 cut(s) 482
KroNI GCCGGC 1 cut(s) 484
Kzo9I GATC 8 cut(s) 16, 54, 83, 94, 170, 669, 703, 1015
LmnI GCTCC 2 cut(s) 193, 734
Lsp1109I GCAGC 3 cut(s) 341, 466, 832
LweI GCATC 4 cut(s) 268, 558, 573, 630
MaeIII GTNAC 4 cut(s) 134, 506, 956, 1027
MalI GATC 8 cut(s) 18, 56, 85, 96, 172, 671, 705, 1017
MboI GATC 8 cut(s) 16, 54, 83, 94, 170, 669, 703, 1015
MboII GAAGA 2 cut(s) 64, 209
MfeI CAATTG 3 cut(s) 418, 438, 807
MflI RGATCY 5 cut(s) 16, 83, 94, 170, 1015
MhlI GDGCHC 2 cut(s) 372, 745
MlsI TGGCCA 2 cut(s) 424, 436
MluCI AATT 8 cut(s) 160, 303, 418, 438, 638, 751, 792, 807
MluNI TGGCCA 2 cut(s) 424, 436
MlyI GAGTC 1 cut(s) 109
MmeI TCCRAC 1 cut(s) 332
Mox20I TGGCCA 2 cut(s) 424, 436
MroNI GCCGGC 1 cut(s) 482
MroXI GAANNNNTTC 1 cut(s) 303
MscI TGGCCA 2 cut(s) 424, 436
MseI TTAA 1 cut(s) 903
MslI CAYNNNNRTG 2 cut(s) 351, 430
Msp20I TGGCCA 2 cut(s) 424, 436
MspI CCGG 3 cut(s) 290, 483, 879
MspR9I CCNGG 6 cut(s) 123, 192, 373, 453, 585, 720
MunI CAATTG 3 cut(s) 418, 438, 807
MvaI CCWGG 6 cut(s) 123, 192, 373, 453, 585, 720
MvnI CGCG 1 cut(s) 948
MwoI GCNNNNNNNGC 3 cut(s) 485, 494, 867
NaeI GCCGGC 1 cut(s) 484
NdeI CATATG 3 cut(s) 71, 850, 1021
NdeII GATC 8 cut(s) 16, 54, 83, 94, 170, 669, 703, 1015
NgoMIV GCCGGC 1 cut(s) 482
NlaIII CATG 4 cut(s) 583, 772, 890, 1015
NlaIV GGNNCC 5 cut(s) 172, 240, 465, 937, 1017
NmeAIII GCCGAG 1 cut(s) 1069
NmuCI GTSAC 4 cut(s) 134, 506, 956, 1027
NspV TTCGAA 1 cut(s) 1007
PceI AGGCCT 2 cut(s) 533, 1000
PdiI GCCGGC 1 cut(s) 484
PdmI GAANNNNTTC 1 cut(s) 303
PfeI GAWTC 1 cut(s) 518
PflMI CCANNNNNTGG 2 cut(s) 443, 719
PkrI GCNGC 4 cut(s) 9, 331, 481, 847
PleI GAGTC 1 cut(s) 109
PpsI GAGTC 1 cut(s) 109
PpuMI RGGWCCY 2 cut(s) 125, 238
Psp5II RGGWCCY 2 cut(s) 125, 238
Psp6I CCWGG 6 cut(s) 121, 190, 371, 451, 583, 718
PspFI CCCAGC 3 cut(s) 683, 737, 817
PspGI CCWGG 6 cut(s) 121, 190, 371, 451, 583, 718
PspN4I GGNNCC 5 cut(s) 172, 240, 465, 937, 1017
PspPI GGNCC 6 cut(s) 125, 238, 455, 464, 608, 928
PspPPI RGGWCCY 2 cut(s) 125, 238
PstI CTGCAG 1 cut(s) 331
PstNI CAGNNNCTG 1 cut(s) 128
PsuI RGATCY 5 cut(s) 16, 83, 94, 170, 1015
RsaI GTAC 5 cut(s) 68, 325, 395, 470, 760
RsaNI GTAC 5 cut(s) 67, 324, 394, 469, 759
RseI CAYNNNNRTG 2 cut(s) 351, 430
Rsr2I CGGWCCG 1 cut(s) 928
RsrII CGGWCCG 1 cut(s) 928
SaqAI TTAA 1 cut(s) 903
SatI GCNGC 4 cut(s) 8, 330, 480, 846
Sau3AI GATC 8 cut(s) 16, 54, 83, 94, 170, 669, 703, 1015
Sau96I GGNCC 6 cut(s) 125, 238, 455, 464, 608, 928
SchI GAGTC 1 cut(s) 109
ScrFI CCNGG 6 cut(s) 123, 192, 373, 453, 585, 720
SduI GDGCHC 2 cut(s) 372, 745
SetI ASST 9 cut(s) 30, 36, 130, 184, 190, 401, 739, 819, 911
SfaNI GCATC 4 cut(s) 268, 558, 573, 630
SfcI CTRYAG 1 cut(s) 327
SfuI TTCGAA 1 cut(s) 1007
SinI GGWCC 6 cut(s) 125, 238, 455, 464, 608, 928
SmiMI CAYNNNNRTG 2 cut(s) 351, 430
SmlI CTYRAG 1 cut(s) 222
SmoI CTYRAG 1 cut(s) 222
Sse9I AATT 8 cut(s) 160, 303, 418, 438, 638, 751, 792, 807
SseBI AGGCCT 2 cut(s) 533, 1000
SsiI CCGC 4 cut(s) 81, 629, 926, 946
StuI AGGCCT 2 cut(s) 533, 1000
StyD4I CCNGG 6 cut(s) 121, 190, 371, 451, 583, 718
TaaI ACNGT 6 cut(s) 203, 468, 476, 572, 758, 932
TaqI TCGA 1 cut(s) 1007
TasI AATT 8 cut(s) 160, 303, 418, 438, 638, 751, 792, 807
TatI WGTACW 3 cut(s) 66, 323, 393
TfiI GAWTC 1 cut(s) 518
Tru1I TTAA 1 cut(s) 903
Tru9I TTAA 1 cut(s) 903
TscAI CASTG 3 cut(s) 208, 565, 596
TseFI GTSAC 4 cut(s) 134, 506, 956, 1027
TseI GCWGC 4 cut(s) 7, 329, 479, 845
Tsp45I GTSAC 4 cut(s) 134, 506, 956, 1027
TspDTI ATGAA 4 cut(s) 651, 804, 879, 903
TspGWI ACGGA 1 cut(s) 747
TspRI CASTG 3 cut(s) 208, 565, 596
Van91I CCANNNNNTGG 2 cut(s) 443, 719
VpaK11BI GGWCC 6 cut(s) 125, 238, 455, 464, 608, 928
XmnI GAANNNNTTC 1 cut(s) 303
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.