FvH4_3g06911

Domain of unknown function (DUF4283)

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
Physical Location & Seq
Reverse (-)
3996234 .. 4000625
4392 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g06911.t1

Sequence Viewer

Length: 1437 bp
ATGTCTTATGTGGTATGTCCTTGGTCTTTCATGAATGAGGGTGTGACAAAGCCCCGATCGTATGCAGGGGTCGCTTCACCGGCAACAATTCCGATCACGGATCTGCCTCTCCCAGTATTTCAAGATGGAAAAACAACAGTTGTAATCTCTGAGGATAGCTACCAAACTGGTTTGGACAGGTGCAAGCATATGCTAATAGGACGACTCCAATTAGCAAACAGAGACAAACCATACACTCCTTCTGATTTGCAACGAAAGCTTGGATCTCTTTGGGGGGATTTGGGTTGCTGGAAGCTAATCCCAATGGGTAAAGGGTTTTATACCTTTAATTTTGCCTCTGCTGATGCGGTGTCTAGGGTTTGGGCAAAGGGTGCTATTGCCCTCAAGCCTGGTACCATCCGATTCTTGCAATGGATCCCTAATTTCTCTCCTGCAAATCAAACAAACACAAACACTCAAGTATGGGTGCGTTTCTGGGATTTAGGATTGGAATTTTGGGAGCCTCAGACCTTACTTGAGATAGCGAGTGTTGTTGGCGTGCCAGTGAGAATCGACCCAAACACTATTCAATGCAGGTATGGCCTATTTGCCAGAATTCTTGTGGATGTTGATCTCTCTGGTGATCTTCCTGCAGAGATTGTGATTAAGCGCAACAACGGGGAATCATTTGTGCAAGCCGTGGATTATGAGAAACTCCCTGACCTGTGTTCTCATTGTGGGAATGTGGGACATTGTGTTACAAATTGCAAATTTGTGAAGCCTGCCCCCTCTAAGTCTGATGGTCCAACGAATGGTAGAGGTCGTTCACGCCGGCGACGTCCCAAGCAGCGACCCTCCTTTGCTCAGAAGTCTCCTGTCCAAGTGCAGGAGGGTGTTGAATGTGATAAGACGGTTGATGTGGAGCTGGAAGAAGCTCAGCTTCAAGGTGCTCTTGATGCAAATAATGAGGAGGATGAGGCCAAGAGCAGTGTCCTTGAGATCTGTGTTAGTGCTAATAAGCAACATGTGGTGCATGAGAGTGTTCCTGCTAAAGGTGTTGGCTCTCCACTTTCAAGTTGGTATGATGAAACTGAACGTGAGGAAGTGGGTGGGGATTTCACTCTTGGTATTGCTAATGACCCTACGCAAGACCTTCTAAGAAAGTTTGTCCGGGATCATCATCTTGATGTGTTGTCGTTTGTGAGTGGTCTTATGATACTTGTCCTTGATCCACCGGAAACCGGAGGAGGCGCCGTCCTTGACCTTCTTAGCTCCGATGGAGGCGACGGCCTTGGTCTTCACGAGGCGGTCGAGGCCTTCTCCGACCTTCTGCTTACACTTGGCGAGAAGAATTTGACCGACGGAGGCGACGACGACAAGCTCACTAGACTTGATCGACGTGGACTTCGTCGATTGACGAGGCCGGAAGCTCCCAGACCTTGTCGGAGCCGGGGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

479

Amino Acids

52.61

Weight (kDa)

5.54

Isoelectric Point (pI)

41.38

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF4283 PF14111 59 - 145 8.1e-07 Domain of unknown function (DUF4283)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000044)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G07760 AT5G28823
fragaria_vesca FvH4_1g13572 FvH4_2g03281 FvH4_2g04691 FvH4_2g08332 FvH4_2g08333 FvH4_2g15313 FvH4_2g26101 FvH4_2g29541 FvH4_3g06911 FvH4_3g34351 FvH4_3g43733 FvH4_4g02432 FvH4_4g05601 FvH4_4g08213 FvH4_4g09961 FvH4_4g10131 FvH4_4g20001 FvH4_4g20002 FvH4_5g01051 FvH4_5g01401 FvH4_5g27943 FvH4_6g09220 FvH4_6g17383 FvH4_6g35491 FvH4_6g46421 FvH4_7g04151 FvH4_7g13962 FvH4_7g18611 FvH4_7g19491 FvH4_7g19511 FvH4_7g26562
malus_domestica MD06G1221600.v1.1
pyrus_communis pycom10g21150
rosa_chinensis RchiOBHm_Chr1g0337571 RchiOBHm_Chr2g0168771 RchiOBHm_Chr3g0453631 RchiOBHm_Chr6g0278581
rosa_laevigata RLG00000001899 RLG00000001925 RLG00000002026 RLG00000003410 RLG00000003767 RLG00000004304 RLG00000004473 RLG00000004677 RLG00000006856 RLG00000007994 RLG00000009888 RLG00000011627 RLG00000012174 RLG00000012217 RLG00000013118 RLG00000013736 RLG00000014194 RLG00000014251 RLG00000015011 RLG00000015057 RLG00000015235 RLG00000017416 RLG00000018052 RLG00000018537 RLG00000019968 RLG00000020096 RLG00000020263 RLG00000022606 RLG00000023119 RLG00000028111 RLG00000029686 RLG00000030126 RLG00000031124 RLG00000031236 RLG00000032766 RLG00000033171 RLG00000033548 RLG00000033987 RLG00000034062 RLG00000035115 RLG00000035863
rosa_multiflora Rmu_co8036712.1_g000001 Rmu_co8080248.1_g000001 Rmu_co8208334.1_g000001 Rmu_co8253451.1_g000001 Rmu_co8393241.1_g000001 Rmu_co8522225.1_g000005 Rmu_sc0000060.1_g000030 Rmu_sc0000060.1_g000031 Rmu_sc0000060.1_g000032 Rmu_sc0000090.1_g000008 Rmu_sc0000149.1_g000051 Rmu_sc0000149.1_g000058 Rmu_sc0000309.1_g000050 Rmu_sc0000370.1_g000022 Rmu_sc0000370.1_g000023 Rmu_sc0000370.1_g000024 Rmu_sc0000418.1_g000018 Rmu_sc0000427.1_g000014 Rmu_sc0000427.1_g000015 Rmu_sc0000434.1_g000008 Rmu_sc0000487.1_g000038 Rmu_sc0000487.1_g000039 Rmu_sc0000569.1_g000029 Rmu_sc0000580.1_g000097 Rmu_sc0000595.1_g000068 Rmu_sc0000607.1_g000027 Rmu_sc0000738.1_g000004 Rmu_sc0000758.1_g000001 Rmu_sc0000758.1_g000002 Rmu_sc0000870.1_g000019 Rmu_sc0000924.1_g000040 Rmu_sc0000924.1_g000041 Rmu_sc0000999.1_g000037 Rmu_sc0001001.1_g000001 Rmu_sc0001010.1_g000080 Rmu_sc0001075.1_g000041 Rmu_sc0001097.1_g000016 Rmu_sc0001173.1_g000020 Rmu_sc0001258.1_g000010 Rmu_sc0001425.1_g000031 Rmu_sc0001493.1_g000020 Rmu_sc0001493.1_g000021 Rmu_sc0001644.1_g000024 Rmu_sc0001648.1_g000039 Rmu_sc0001662.1_g000002 Rmu_sc0001849.1_g000046 Rmu_sc0001851.1_g000038 Rmu_sc0001861.1_g000006 Rmu_sc0001899.1_g000008 Rmu_sc0002231.1_g000023 Rmu_sc0002393.1_g000012 Rmu_sc0002515.1_g000010 Rmu_sc0002551.1_g000013 Rmu_sc0002680.1_g000029 Rmu_sc0002700.1_g000030 Rmu_sc0002700.1_g000031 Rmu_sc0002709.1_g000035 Rmu_sc0002779.1_g000017 Rmu_sc0003267.1_g000040 Rmu_sc0003306.1_g000009 Rmu_sc0003338.1_g000014 Rmu_sc0003522.1_g000038 Rmu_sc0003522.1_g000039 Rmu_sc0003653.1_g000031 Rmu_sc0003901.1_g000003 Rmu_sc0003920.1_g000009 Rmu_sc0004014.1_g000009 Rmu_sc0004016.1_g000013 Rmu_sc0004031.1_g000002 Rmu_sc0004106.1_g000001 Rmu_sc0004432.1_g000004 Rmu_sc0004481.1_g000020 Rmu_sc0004874.1_g000005 Rmu_sc0004928.1_g000005 Rmu_sc0005065.1_g000053 Rmu_sc0005091.1_g000005 Rmu_sc0005217.1_g000015 Rmu_sc0005242.1_g000002 Rmu_sc0005300.1_g000011 Rmu_sc0005400.1_g000004 Rmu_sc0005486.1_g000007 Rmu_sc0005527.1_g000015 Rmu_sc0006059.1_g000021 Rmu_sc0006087.1_g000004 Rmu_sc0006184.1_g000006 Rmu_sc0006184.1_g000007 Rmu_sc0006578.1_g000006 Rmu_sc0006730.1_g000010 Rmu_sc0006736.1_g000030 Rmu_sc0006736.1_g000033 Rmu_sc0007333.1_g000018 Rmu_sc0007856.1_g000010 Rmu_sc0008231.1_g000003 Rmu_sc0009862.1_g000012 Rmu_sc0010547.1_g000001 Rmu_sc0010547.1_g000003 Rmu_sc0010632.1_g000012 Rmu_sc0010747.1_g000008 Rmu_sc0011075.1_g000009 Rmu_sc0011565.1_g000004 Rmu_sc0011641.1_g000003 Rmu_sc0013102.1_g000013 Rmu_sc0013160.1_g000006 Rmu_sc0014846.1_g000004 Rmu_sc0017037.1_g000003 Rmu_sc0018203.1_g000001 Rmu_sc0018204.1_g000001 Rmu_sc0018348.1_g000001 Rmu_sc0019354.1_g000002 Rmu_sc0021630.1_g000002 Rmu_sc0022987.1_g000002 Rmu_sc0024469.1_g000005 Rmu_sc0033519.1_g000001 Rmu_sc0033519.1_g000002 Rmu_sc0033519.1_g000003 Rmu_sc0042775.1_g000001 Rmu_ssc0000110.1_g000003 Rmu_ssc0000110.1_g000004 Rmu_ssc0000126.1_g000068 Rmu_ssc0000200.1_g000007 Rmu_ssc0000295.1_g000003 Rmu_ssc0000295.1_g000004 Rmu_ssc0000299.1_g000010 Rmu_ssc0000308.1_g000024 Rmu_ssc0000339.1_g000006 Rmu_ssc0000385.1_g000012 Rmu_ssc0000409.1_g000004 Rmu_ssc0000421.1_g000004
rosa_roxburghii Rroxscaffold_156G00440360 Rroxscaffold_166G00440800 Rroxscaffold_1G00039040 Rroxscaffold_1G00039050 Rroxscaffold_1G00073950 Rroxscaffold_2G00091710 Rroxscaffold_2G00120050 Rroxscaffold_2G00122590 Rroxscaffold_3G00219700 Rroxscaffold_3G00264140 Rroxscaffold_4G00290600 Rroxscaffold_4G00323610 Rroxscaffold_4G00328460 Rroxscaffold_5G00343440 Rroxscaffold_5G00343570 Rroxscaffold_5G00378540 Rroxscaffold_5G00385090 Rroxscaffold_7G00169130 Rroxscaffold_7G00216420
rosa_rugosa Rorug01G0065800 Rorug01G0073500 Rorug01G0091700 Rorug01G0096500 Rorug01G0204700.1 Rorug01G0249100 Rorug01G0333800 Rorug01G0333900 Rorug01G0339500 Rorug01G0431300 Rorug02G0085400 Rorug02G0117500 Rorug02G0130900 Rorug02G0178800 Rorug02G0226700 Rorug02G0336300 Rorug02G0338700 Rorug02G0351400 Rorug02G0459900 Rorug03G0187000 Rorug03G0223700 Rorug03G0291300 Rorug03G0291300 Rorug03G0311100 Rorug03G0316900 Rorug03G0346000 Rorug04G0014500 Rorug04G0014600 Rorug04G0124100 Rorug04G0136500 Rorug04G0302000 Rorug04G0338100 Rorug04G0338200 Rorug04G0413100 Rorug05G0182200 Rorug05G0226500 Rorug05G0273300 Rorug05G0292200 Rorug05G0292200 Rorug05G0392500 Rorug05G0394500 Rorug05G0394600 Rorug05G0505600.1 Rorug06G0351400 Rorug06G0393400 Rorug06G0393600 Rorug06G0470000 Rorug07G0063100 Rorug07G0086800 Rorug07G0109200 Rorug07G0236100
rosa_samantha Rh1AG010800 Rh1AG011100 Rh1AG064900 Rh1AG088000 Rh1AG207100 Rh1AG262000 Rh1AG300800 Rh1BG043000 Rh1BG144600 Rh1BG180700 Rh1BG180800 Rh1BG328800 Rh1BG399400 Rh1CG041400 Rh1CG047300 Rh1CG379700 Rh1DG036500 Rh1DG083000 Rh1DG210700 Rh1DG210800 Rh1DG231100 Rh2AG007900 Rh2AG055500 Rh2AG339100 Rh2AG368100 Rh2BG243300 Rh2BG258900 Rh2BG292000 Rh2BG333500 Rh2BG387300 Rh2BG612800 Rh2BG619100 Rh2CG026500 Rh2CG163600 Rh2CG535700 Rh2DG186400 Rh2DG235000 Rh2DG314500 Rh2DG388500 Rh2DG391400 Rh2DG496900 Rh2DG526700 Rh2DG570700 Rh3AG330700 Rh3BG266900 Rh3CG236000 Rh3CG340400 Rh3DG090000 Rh3DG278400 Rh3DG297600 Rh3DG362600 Rh4AG001300 Rh4AG023300 Rh4AG097100 Rh4AG427000 Rh4BG029400 Rh4BG032400 Rh4BG086000 Rh4BG249200 Rh4CG001900 Rh4CG040600 Rh4CG093000 Rh4CG106300 Rh4CG113200 Rh4CG113900 Rh4DG002300 Rh4DG144400 Rh4DG234200 Rh5AG043700 Rh5AG084900 Rh5AG161500 Rh5AG409000 Rh5AG457200 Rh5AG457900 Rh5AG473700 Rh5AG520600 Rh5BG042100 Rh5BG124100 Rh5BG323500 Rh5BG417200 Rh5BG443700 Rh5BG451500 Rh5BG464900 Rh5BG470400 Rh5BG522500 Rh5CG068800 Rh5CG178300 Rh5CG231000 Rh5CG258600 Rh5CG394500 Rh5CG473700 Rh5DG164700 Rh5DG235400 Rh5DG261300 Rh5DG304900 Rh5DG334500 Rh5DG424300 Rh5DG458400 Rh5DG478600 Rh5DG552300 Rh5DG552700 Rh6AG037000 Rh6AG042100 Rh6AG255500 Rh6AG283400 Rh6AG291800 Rh6BG049600 Rh6BG080700 Rh6BG114600 Rh6BG128900 Rh6BG352500 Rh6CG052400 Rh6CG112900 Rh6CG113000 Rh6CG131300 Rh6CG157700 Rh6CG243200 Rh6CG254100 Rh6CG275700 Rh6CG299700 Rh6CG309100 Rh6CG317600 Rh6CG342600 Rh6CG471900 Rh6DG038200 Rh6DG102300 Rh6DG114400 Rh6DG225900 Rh6DG292900 Rh6DG320700 Rh6DG512800 Rh7AG217700 Rh7AG313900 Rh7AG446000 Rh7AG472600 Rh7BG223100 Rh7BG349900 Rh7BG352000 Rh7CG160200 Rh7CG233900 Rh7CG242700 Rh7CG273900 Rh7CG306400 Rh7CG322200 Rh7DG053800 Rh7DG077800 Rh7DG227700 Rh7DG404800
rosa_wichuraiana Rw0G003990 Rw2G022110 Rw2G024890 Rw6G005700 Rw7G008770

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 820
Acc36I ACCTGC 1 cut(s) 564
Acc65I GGTACC 1 cut(s) 392
AccB1I GGYRCC 2 cut(s) 392, 1229
AccB7I CCANNNNNTGG 1 cut(s) 791
AciI CCGC 2 cut(s) 347, 1286
AclWI GGATC 6 cut(s) 108, 271, 409, 422, 1161, 1202
AcsI RAATTY 4 cut(s) 491, 594, 749, 1330
AcyI GRCGYC 2 cut(s) 817, 1230
AfaI GTAC 1 cut(s) 394
AfiI CCNNNNNNNGG 4 cut(s) 791, 865, 1031, 1220
AflIII ACRYGT 1 cut(s) 1003
AgsI TTSAA 5 cut(s) 122, 569, 878, 923, 1053
AjiI CACGTC 1 cut(s) 1379
AjnI CCWGG 1 cut(s) 388
AluBI AGCT 9 cut(s) 159, 259, 295, 904, 914, 919, 1251, 1360, 1409
AluI AGCT 9 cut(s) 159, 259, 295, 904, 914, 919, 1251, 1360, 1409
Alw21I GWGCWC 1 cut(s) 931
Alw26I GTCTC 2 cut(s) 216, 855
AlwI GGATC 6 cut(s) 108, 271, 409, 422, 1161, 1202
AoxI GGCC 5 cut(s) 580, 957, 1267, 1293, 1400
ApeKI GCWGC 1 cut(s) 826
ApoI RAATTY 4 cut(s) 491, 594, 749, 1330
ArsI GACNNNNNNTTYG 2 cut(s) 1368, 1400
Asp718I GGTACC 1 cut(s) 392
AspLEI GCGC 2 cut(s) 651, 1232
AspS9I GGNCC 1 cut(s) 782
AsuC2I CCSGG 2 cut(s) 1151, 1430
AsuHPI GGTGA 2 cut(s) 69, 632
AvaII GGWCC 1 cut(s) 782
BamHI GGATCC 1 cut(s) 414
BanI GGYRCC 2 cut(s) 392, 1229
BauI CACGAG 1 cut(s) 1280
BbsI GAAGAC 1 cut(s) 1268
Bbv12I GWGCWC 1 cut(s) 931
BbvI GCAGC 1 cut(s) 838
BccI CCATC 4 cut(s) 119, 404, 773, 1250
BceAI ACGGC 3 cut(s) 662, 1217, 1282
BciT130I CCWGG 1 cut(s) 390
BcnI CCSGG 2 cut(s) 1151, 1430
BcoDI GTCTC 2 cut(s) 216, 855
BfaI CTAG 2 cut(s) 354, 1365
BfmI CTRYAG 1 cut(s) 630
BfoI RGCGCY 1 cut(s) 1233
BfuAI ACCTGC 1 cut(s) 564
BglII AGATCT 1 cut(s) 978
BisI GCNGC 1 cut(s) 827
BlpI GCTNAGC 1 cut(s) 915
BlsI GCNGC 1 cut(s) 828
Bme1390I CCNGG 3 cut(s) 390, 1151, 1430
Bme18I GGWCC 1 cut(s) 782
BmgBI CACGTC 1 cut(s) 1379
BmgT120I GGNCC 1 cut(s) 782
BmiI GGNNCC 5 cut(s) 394, 416, 501, 1231, 1427
BmrFI CCNGG 3 cut(s) 390, 1151, 1430
BmrI ACTGGG 1 cut(s) 107
BmsI GCATC 2 cut(s) 334, 925
BmuI ACTGGG 1 cut(s) 107
BpiI GAAGAC 1 cut(s) 1268
BplI GAGNNNNNCTC 2 cut(s) 1283, 1315
Bpu1102I GCTNAGC 1 cut(s) 915
BpuEI CTTGAG 4 cut(s) 368, 441, 536, 995
BpuMI CCSGG 2 cut(s) 1151, 1430
BsaBI GATNNNNATC 2 cut(s) 609, 1158
BsaHI GRCGYC 2 cut(s) 817, 1230
BsaJI CCNNGG 4 cut(s) 20, 678, 1270, 1429
BsaWI WCCGGW 2 cut(s) 1213, 1220
BsaXI ACNNNNNCTCC 2 cut(s) 1218, 1248
Bsc4I CCNNNNNNNGG 4 cut(s) 791, 865, 1031, 1220
Bse118I RCCGGY 2 cut(s) 79, 810
Bse1I ACTGG 3 cut(s) 113, 172, 542
Bse3DI GCAATG 1 cut(s) 416
Bse8I GATNNNNATC 2 cut(s) 609, 1158
BseBI CCWGG 1 cut(s) 390
BseDI CCNNGG 4 cut(s) 20, 678, 1270, 1429
BseGI GGATG 3 cut(s) 396, 610, 958
BseJI GATNNNNATC 2 cut(s) 609, 1158
BseLI CCNNNNNNNGG 4 cut(s) 791, 865, 1031, 1220
BseMI GCAATG 1 cut(s) 416
BseMII CTCAG 4 cut(s) 141, 518, 857, 929
BseNI ACTGG 3 cut(s) 113, 172, 542
BseRI GAGGAG 2 cut(s) 962, 1239
BseXI GCAGC 1 cut(s) 838
BsgI GTGCAG 1 cut(s) 884
Bsh1285I CGRYCG 2 cut(s) 59, 1290
BshFI GGCC 5 cut(s) 582, 959, 1269, 1295, 1402
BshNI GGYRCC 2 cut(s) 392, 1229
BsiEI CGRYCG 2 cut(s) 59, 1290
BsiHKAI GWGCWC 1 cut(s) 931
BsiSI CCGG 7 cut(s) 80, 811, 1150, 1214, 1221, 1403, 1429
BslFI GGGAC 2 cut(s) 741, 804
BslI CCNNNNNNNGG 4 cut(s) 791, 865, 1031, 1220
BsmAI GTCTC 2 cut(s) 216, 855
BsmFI GGGAC 2 cut(s) 741, 804
BsnI GGCC 5 cut(s) 582, 959, 1269, 1295, 1402
Bsp1286I GDGCHC 1 cut(s) 931
Bsp1720I GCTNAGC 1 cut(s) 915
BspACI CCGC 2 cut(s) 347, 1286
BspANI GGCC 5 cut(s) 582, 959, 1269, 1295, 1402
BspCNI CTCAG 4 cut(s) 142, 517, 856, 928
BspHI TCATGA 1 cut(s) 30
BspLI GGNNCC 5 cut(s) 394, 416, 501, 1231, 1427
BspMAI CTGCAG 1 cut(s) 634
BspMI ACCTGC 1 cut(s) 564
BspPI GGATC 6 cut(s) 108, 271, 409, 422, 1161, 1202
BspT107I GGYRCC 2 cut(s) 392, 1229
BsrDI GCAATG 1 cut(s) 416
BsrFI RCCGGY 2 cut(s) 79, 810
BsrI ACTGG 3 cut(s) 113, 172, 542
BssAI RCCGGY 2 cut(s) 79, 810
BssECI CCNNGG 4 cut(s) 20, 678, 1270, 1429
BssNI GRCGYC 2 cut(s) 817, 1230
BssSI CACGAG 1 cut(s) 1280
BssT1I CCWWGG 2 cut(s) 20, 1270
Bst2BI CACGAG 1 cut(s) 1280
Bst2UI CCWGG 1 cut(s) 390
Bst4CI ACNGT 2 cut(s) 139, 892
BstACI GRCGYC 2 cut(s) 817, 1230
BstAPI GCANNNNNTGC 1 cut(s) 371
BstC8I GCNNGC 5 cut(s) 185, 539, 675, 762, 812
BstDEI CTNAG 7 cut(s) 150, 504, 771, 843, 915, 1136, 1247
BstDSI CCRYGG 1 cut(s) 678
BstENI CCTNNNNNAGG 1 cut(s) 1029
BstF5I GGATG 3 cut(s) 396, 610, 958
BstH2I RGCGCY 1 cut(s) 1233
BstHHI GCGC 2 cut(s) 651, 1232
BstMAI GTCTC 2 cut(s) 216, 855
BstMCI CGRYCG 2 cut(s) 59, 1290
BstMWI GCNNNNNNNGC 7 cut(s) 71, 80, 256, 371, 579, 935, 1292
BstNI CCWGG 1 cut(s) 390
BstNSI RCATGY 1 cut(s) 1007
BstSCI CCNGG 3 cut(s) 388, 1149, 1428
BstSFI CTRYAG 1 cut(s) 630
BstV1I GCAGC 1 cut(s) 838
BstV2I GAAGAC 1 cut(s) 1268
BstX2I RGATCY 4 cut(s) 100, 263, 414, 978
BstYI RGATCY 4 cut(s) 100, 263, 414, 978
BsuRI GGCC 5 cut(s) 582, 959, 1269, 1295, 1402
BtgI CCRYGG 1 cut(s) 678
BtrI CACGTC 1 cut(s) 1379
BtsCI GGATG 3 cut(s) 396, 610, 958
BtsI GCAGTG 1 cut(s) 973
BtsIMutI CAGTG 2 cut(s) 549, 973
BveI ACCTGC 1 cut(s) 564
Cac8I GCNNGC 5 cut(s) 185, 539, 675, 762, 812
CciI TCATGA 1 cut(s) 30
CfoI GCGC 2 cut(s) 651, 1232
Cfr10I RCCGGY 2 cut(s) 79, 810
Cfr13I GGNCC 1 cut(s) 782
Csp6I GTAC 1 cut(s) 393
CviAII CATG 3 cut(s) 31, 1004, 1013
CviQI GTAC 1 cut(s) 393
DdeI CTNAG 7 cut(s) 150, 504, 771, 843, 915, 1136, 1247
DinI GGCGCC 1 cut(s) 1231
Eco130I CCWWGG 2 cut(s) 20, 1270
Eco147I AGGCCT 1 cut(s) 1295
Eco47I GGWCC 1 cut(s) 782
EcoNI CCTNNNNNAGG 1 cut(s) 1029
EcoRI GAATTC 1 cut(s) 594
EcoRII CCWGG 1 cut(s) 388
EcoT14I CCWWGG 2 cut(s) 20, 1270
EgeI GGCGCC 1 cut(s) 1231
EheI GGCGCC 1 cut(s) 1231
ErhI CCWWGG 2 cut(s) 20, 1270
FaeI CATG 3 cut(s) 34, 1007, 1016
FalI AAGNNNNNCTT 4 cut(s) 903, 935, 915, 947
FaqI GGGAC 2 cut(s) 741, 804
FatI CATG 3 cut(s) 30, 1003, 1012
FauNDI CATATG 1 cut(s) 189
Fnu4HI GCNGC 1 cut(s) 827
FokI GGATG 3 cut(s) 383, 617, 965
Fsp4HI GCNGC 1 cut(s) 827
FspBI CTAG 2 cut(s) 354, 1365
GlaI GCGC 2 cut(s) 650, 1231
GluI GCNGC 1 cut(s) 827
HaeII RGCGCY 1 cut(s) 1233
HaeIII GGCC 5 cut(s) 582, 959, 1269, 1295, 1402
HapII CCGG 7 cut(s) 80, 811, 1150, 1214, 1221, 1403, 1429
HhaI GCGC 2 cut(s) 651, 1232
Hin1I GRCGYC 2 cut(s) 817, 1230
Hin1II CATG 3 cut(s) 34, 1007, 1016
Hin6I GCGC 2 cut(s) 649, 1230
HinP1I GCGC 2 cut(s) 649, 1230
HindIII AAGCTT 1 cut(s) 257
HinfI GANTC 4 cut(s) 204, 402, 549, 662
HpaII CCGG 7 cut(s) 80, 811, 1150, 1214, 1221, 1403, 1429
HphI GGTGA 2 cut(s) 69, 632
Hpy166II GTNNAC 2 cut(s) 806, 1382
Hpy188III TCNNGA 5 cut(s) 31, 122, 932, 1163, 1280
Hpy8I GTNNAC 2 cut(s) 806, 1382
Hpy99I CGWCG 7 cut(s) 819, 1268, 1343, 1352, 1355, 1380, 1392
HpyAV CCTTC 5 cut(s) 249, 1142, 1253, 1306, 1316
HpyCH4III ACNGT 2 cut(s) 139, 892
HpyCH4IV ACGT 3 cut(s) 817, 1075, 1378
HpyF10VI GCNNNNNNNGC 7 cut(s) 71, 80, 256, 371, 579, 935, 1292
HpyF3I CTNAG 7 cut(s) 150, 504, 771, 843, 915, 1136, 1247
HpySE526I ACGT 3 cut(s) 817, 1075, 1378
Hsp92I GRCGYC 2 cut(s) 817, 1230
Hsp92II CATG 3 cut(s) 34, 1007, 1016
HspAI GCGC 2 cut(s) 649, 1230
KasI GGCGCC 1 cut(s) 1229
KpnI GGTACC 1 cut(s) 396
KroI GCCGGC 1 cut(s) 810
KroNI GCCGGC 1 cut(s) 812
LmnI GCTCC 5 cut(s) 499, 901, 1256, 1414, 1425
Lsp1109I GCAGC 1 cut(s) 838
LweI GCATC 2 cut(s) 334, 925
MaeI CTAG 2 cut(s) 354, 1365
MaeII ACGT 3 cut(s) 817, 1075, 1378
MaeIII GTNAC 2 cut(s) 43, 736
MboII GAAGA 4 cut(s) 617, 920, 1268, 1339
MflI RGATCY 4 cut(s) 100, 263, 414, 978
MhlI GDGCHC 1 cut(s) 931
MluCI AATT 9 cut(s) 87, 209, 328, 421, 491, 594, 742, 749, 1330
Mly113I GGCGCC 1 cut(s) 1230
MlyI GAGTC 1 cut(s) 198
MmeI TCCRAC 3 cut(s) 809, 1326, 1403
MreI CGCCGGCG 1 cut(s) 810
MroNI GCCGGC 1 cut(s) 810
MseI TTAA 2 cut(s) 327, 645
MslI CAYNNNNRTG 2 cut(s) 1017, 1164
MspI CCGG 7 cut(s) 80, 811, 1150, 1214, 1221, 1403, 1429
MspR9I CCNGG 3 cut(s) 390, 1151, 1430
MvaI CCWGG 1 cut(s) 390
MwoI GCNNNNNNNGC 7 cut(s) 71, 80, 256, 371, 579, 935, 1292
NaeI GCCGGC 1 cut(s) 812
NarI GGCGCC 1 cut(s) 1230
NciI CCSGG 2 cut(s) 1151, 1430
NdeI CATATG 1 cut(s) 189
NgoMIV GCCGGC 1 cut(s) 810
NlaIII CATG 3 cut(s) 34, 1007, 1016
NlaIV GGNNCC 5 cut(s) 394, 416, 501, 1231, 1427
NmuCI GTSAC 1 cut(s) 43
NspI RCATGY 1 cut(s) 1007
PagI TCATGA 1 cut(s) 30
PceI AGGCCT 1 cut(s) 1295
PciI ACATGT 1 cut(s) 1003
PcsI WCGNNNNNNNCGW 4 cut(s) 814, 1287, 1347, 1384
PdiI GCCGGC 1 cut(s) 812
PfeI GAWTC 3 cut(s) 402, 549, 662
PflFI GACNNNGTC 2 cut(s) 1386, 1419
PflMI CCANNNNNTGG 1 cut(s) 791
PfoI TCCNGGA 1 cut(s) 1149
PkrI GCNGC 1 cut(s) 828
Ple19I CGATCG 1 cut(s) 59
PleI GAGTC 1 cut(s) 198
PluTI GGCGCC 1 cut(s) 1233
PpsI GAGTC 1 cut(s) 198
PscI ACATGT 1 cut(s) 1003
Psp6I CCWGG 1 cut(s) 388
PspGI CCWGG 1 cut(s) 388
PspN4I GGNNCC 5 cut(s) 394, 416, 501, 1231, 1427
PspPI GGNCC 1 cut(s) 782
PsrI GAACNNNNNNTAC 2 cut(s) 787, 819
PstI CTGCAG 1 cut(s) 634
PsuI RGATCY 4 cut(s) 100, 263, 414, 978
PsyI GACNNNGTC 2 cut(s) 1386, 1419
PvuI CGATCG 1 cut(s) 59
RsaI GTAC 1 cut(s) 394
RsaNI GTAC 1 cut(s) 393
RseI CAYNNNNRTG 2 cut(s) 1017, 1164
SaqAI TTAA 2 cut(s) 327, 645
SatI GCNGC 1 cut(s) 827
Sau96I GGNCC 1 cut(s) 782
SchI GAGTC 1 cut(s) 198
ScrFI CCNGG 3 cut(s) 390, 1151, 1430
SduI GDGCHC 1 cut(s) 931
SfaNI GCATC 2 cut(s) 334, 925
SfcI CTRYAG 1 cut(s) 630
SfoI GGCGCC 1 cut(s) 1231
SgrAI CRCCGGYG 1 cut(s) 810
SinI GGWCC 1 cut(s) 782
SmiMI CAYNNNNRTG 2 cut(s) 1017, 1164
SmlI CTYRAG 4 cut(s) 383, 456, 515, 974
SmoI CTYRAG 4 cut(s) 383, 456, 515, 974
Sse9I AATT 9 cut(s) 87, 209, 328, 421, 491, 594, 742, 749, 1330
SseBI AGGCCT 1 cut(s) 1295
SsiI CCGC 2 cut(s) 347, 1286
SspDI GGCGCC 1 cut(s) 1229
SspMI CTAG 2 cut(s) 354, 1365
StuI AGGCCT 1 cut(s) 1295
StyD4I CCNGG 3 cut(s) 388, 1149, 1428
StyI CCWWGG 2 cut(s) 20, 1270
TaaI ACNGT 2 cut(s) 139, 892
TaiI ACGT 3 cut(s) 820, 1078, 1381
TaqI TCGA 4 cut(s) 552, 1290, 1375, 1390
TaqII GACCGA 1 cut(s) 1352
TasI AATT 9 cut(s) 87, 209, 328, 421, 491, 594, 742, 749, 1330
TfiI GAWTC 3 cut(s) 402, 549, 662
Tru1I TTAA 2 cut(s) 327, 645
Tru9I TTAA 2 cut(s) 327, 645
TscAI CASTG 2 cut(s) 549, 973
TseFI GTSAC 1 cut(s) 43
TseI GCWGC 1 cut(s) 826
Tsp45I GTSAC 1 cut(s) 43
TspDTI ATGAA 3 cut(s) 19, 47, 1080
TspGWI ACGGA 2 cut(s) 113, 1356
TspRI CASTG 2 cut(s) 549, 973
Tth111I GACNNNGTC 2 cut(s) 1386, 1419
Van91I CCANNNNNTGG 1 cut(s) 791
VpaK11BI GGWCC 1 cut(s) 782
XagI CCTNNNNNAGG 1 cut(s) 1029
XapI RAATTY 4 cut(s) 491, 594, 749, 1330
XceI RCATGY 1 cut(s) 1007
XcmI CCANNNNNNNNNTGG 2 cut(s) 598, 1053
XspI CTAG 2 cut(s) 354, 1365
ZraI GACGTC 1 cut(s) 818
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.