Domain of unknown function (DUF4283)
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| zf-CCHC_4 | PF14392 | 96 - 143 | 2e-07 | Zinc knuckle |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 120 |
| AccB1I | GGYRCC | 1 cut(s) | 589 |
| AccBSI | CCGCTC | 1 cut(s) | 181 |
| AciI | CCGC | 2 cut(s) | 181, 593 |
| AclI | AACGTT | 1 cut(s) | 520 |
| AclWI | GGATC | 2 cut(s) | 227, 255 |
| AcsI | RAATTY | 3 cut(s) | 124, 198, 494 |
| AcuI | CTGAAG | 1 cut(s) | 564 |
| AfaI | GTAC | 1 cut(s) | 375 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 154 |
| AgsI | TTSAA | 5 cut(s) | 197, 362, 420, 489, 499 |
| AjnI | CCWGG | 1 cut(s) | 97 |
| Alw26I | GTCTC | 1 cut(s) | 266 |
| AlwI | GGATC | 2 cut(s) | 227, 255 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 304 |
| Ama87I | CYCGRG | 1 cut(s) | 204 |
| ApeKI | GCWGC | 2 cut(s) | 554, 619 |
| ApoI | RAATTY | 3 cut(s) | 124, 198, 494 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 149, 181 |
| AspS9I | GGNCC | 2 cut(s) | 145, 157 |
| AsuC2I | CCSGG | 1 cut(s) | 573 |
| AvaI | CYCGRG | 1 cut(s) | 204 |
| AvaII | GGWCC | 2 cut(s) | 145, 157 |
| BaeGI | GKGCMC | 1 cut(s) | 53 |
| BanI | GGYRCC | 1 cut(s) | 589 |
| BbvI | GCAGC | 2 cut(s) | 566, 631 |
| BccI | CCATC | 3 cut(s) | 329, 452, 580 |
| BciT130I | CCWGG | 1 cut(s) | 99 |
| BclI | TGATCA | 1 cut(s) | 84 |
| BcnI | CCSGG | 1 cut(s) | 573 |
| BcoDI | GTCTC | 1 cut(s) | 266 |
| BfmI | CTRYAG | 2 cut(s) | 630, 641 |
| BisI | GCNGC | 3 cut(s) | 182, 555, 620 |
| BlsI | GCNGC | 3 cut(s) | 183, 556, 621 |
| Bme1390I | CCNGG | 2 cut(s) | 99, 573 |
| Bme18I | GGWCC | 2 cut(s) | 145, 157 |
| BmeT110I | CYCGRG | 1 cut(s) | 204 |
| BmgT120I | GGNCC | 2 cut(s) | 145, 157 |
| BmiI | GGNNCC | 5 cut(s) | 146, 158, 463, 534, 591 |
| BmrFI | CCNGG | 2 cut(s) | 99, 573 |
| BmrI | ACTGGG | 1 cut(s) | 56 |
| BmsI | GCATC | 1 cut(s) | 541 |
| BmuI | ACTGGG | 1 cut(s) | 56 |
| BpuMI | CCSGG | 1 cut(s) | 573 |
| BsaI | GGTCTC | 1 cut(s) | 266 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 154 |
| Bse1I | ACTGG | 1 cut(s) | 51 |
| Bse3DI | GCAATG | 1 cut(s) | 614 |
| BseBI | CCWGG | 1 cut(s) | 99 |
| BseGI | GGATG | 3 cut(s) | 28, 463, 591 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 154 |
| BseMI | GCAATG | 1 cut(s) | 614 |
| BseMII | CTCAG | 5 cut(s) | 91, 267, 311, 432, 597 |
| BseNI | ACTGG | 1 cut(s) | 51 |
| BseSI | GKGCMC | 1 cut(s) | 53 |
| BseXI | GCAGC | 2 cut(s) | 566, 631 |
| BshNI | GGYRCC | 1 cut(s) | 589 |
| BsiHKCI | CYCGRG | 1 cut(s) | 204 |
| BsiSI | CCGG | 1 cut(s) | 573 |
| BslFI | GGGAC | 2 cut(s) | 170, 486 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 154 |
| BsmAI | GTCTC | 1 cut(s) | 266 |
| BsmFI | GGGAC | 2 cut(s) | 170, 486 |
| BsmI | GAATGC | 1 cut(s) | 222 |
| Bso31I | GGTCTC | 1 cut(s) | 266 |
| BsoBI | CYCGRG | 1 cut(s) | 204 |
| Bsp1286I | GDGCHC | 1 cut(s) | 53 |
| Bsp143I | GATC | 5 cut(s) | 84, 232, 247, 476, 503 |
| BspACI | CCGC | 2 cut(s) | 181, 593 |
| BspCNI | CTCAG | 5 cut(s) | 90, 266, 310, 433, 598 |
| BspLI | GGNNCC | 5 cut(s) | 146, 158, 463, 534, 591 |
| BspMAI | CTGCAG | 1 cut(s) | 634 |
| BspPI | GGATC | 2 cut(s) | 227, 255 |
| BspQI | GCTCTTC | 2 cut(s) | 490, 583 |
| BspT107I | GGYRCC | 1 cut(s) | 589 |
| BspTNI | GGTCTC | 1 cut(s) | 266 |
| BsrBI | CCGCTC | 1 cut(s) | 181 |
| BsrDI | GCAATG | 1 cut(s) | 614 |
| BsrI | ACTGG | 1 cut(s) | 51 |
| BssMI | GATC | 5 cut(s) | 84, 232, 247, 476, 503 |
| Bst2UI | CCWGG | 1 cut(s) | 99 |
| Bst4CI | ACNGT | 3 cut(s) | 244, 306, 642 |
| Bst6I | CTCTTC | 2 cut(s) | 490, 583 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 563, 616 |
| BstC8I | GCNNGC | 1 cut(s) | 624 |
| BstDEI | CTNAG | 5 cut(s) | 77, 253, 297, 441, 606 |
| BstF5I | GGATG | 3 cut(s) | 28, 463, 591 |
| BstKTI | GATC | 5 cut(s) | 87, 235, 250, 479, 506 |
| BstMAI | GTCTC | 1 cut(s) | 266 |
| BstMBI | GATC | 5 cut(s) | 84, 232, 247, 476, 503 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 532, 554, 563, 616 |
| BstNI | CCWGG | 1 cut(s) | 99 |
| BstSCI | CCNGG | 2 cut(s) | 97, 571 |
| BstSFI | CTRYAG | 2 cut(s) | 630, 641 |
| BstSLI | GKGCMC | 1 cut(s) | 53 |
| BstV1I | GCAGC | 2 cut(s) | 566, 631 |
| BtsCI | GGATG | 3 cut(s) | 28, 463, 591 |
| BtsIMutI | CAGTG | 4 cut(s) | 44, 249, 438, 638 |
| Cac8I | GCNNGC | 1 cut(s) | 624 |
| CaiI | CAGNNNCTG | 1 cut(s) | 304 |
| Cfr13I | GGNCC | 2 cut(s) | 145, 157 |
| Csp6I | GTAC | 1 cut(s) | 374 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 225, 260, 525, 560 |
| CviJI | RGCY | 6 cut(s) | 72, 97, 416, 535, 576, 637 |
| CviKI_1 | RGCY | 6 cut(s) | 72, 97, 416, 535, 576, 637 |
| CviQI | GTAC | 1 cut(s) | 374 |
| DdeI | CTNAG | 5 cut(s) | 77, 253, 297, 441, 606 |
| DpnI | GATC | 5 cut(s) | 86, 234, 249, 478, 505 |
| DpnII | GATC | 5 cut(s) | 84, 232, 247, 476, 503 |
| Eam1104I | CTCTTC | 2 cut(s) | 490, 583 |
| EarI | CTCTTC | 2 cut(s) | 490, 583 |
| Eco31I | GGTCTC | 1 cut(s) | 266 |
| Eco47I | GGWCC | 2 cut(s) | 145, 157 |
| Eco57I | CTGAAG | 1 cut(s) | 564 |
| Eco88I | CYCGRG | 1 cut(s) | 204 |
| EcoO109I | RGGNCCY | 2 cut(s) | 145, 157 |
| EcoRII | CCWGG | 1 cut(s) | 97 |
| FaiI | YATR | 7 cut(s) | 40, 120, 267, 281, 366, 401, 542 |
| FaqI | GGGAC | 2 cut(s) | 170, 486 |
| FbaI | TGATCA | 1 cut(s) | 84 |
| Fnu4HI | GCNGC | 3 cut(s) | 182, 555, 620 |
| FokI | GGATG | 3 cut(s) | 35, 470, 598 |
| Fsp4HI | GCNGC | 3 cut(s) | 182, 555, 620 |
| GluI | GCNGC | 3 cut(s) | 182, 555, 620 |
| HapII | CCGG | 1 cut(s) | 573 |
| HincII | GTYRAC | 1 cut(s) | 436 |
| HindII | GTYRAC | 1 cut(s) | 436 |
| HinfI | GANTC | 1 cut(s) | 187 |
| HpaI | GTTAAC | 1 cut(s) | 436 |
| HpaII | CCGG | 1 cut(s) | 573 |
| Hpy166II | GTNNAC | 2 cut(s) | 289, 436 |
| Hpy188I | TCNGA | 3 cut(s) | 80, 215, 607 |
| Hpy188III | TCNNGA | 5 cut(s) | 204, 355, 465, 489, 507 |
| Hpy8I | GTNNAC | 2 cut(s) | 289, 436 |
| HpyAV | CCTTC | 1 cut(s) | 504 |
| HpyCH4III | ACNGT | 3 cut(s) | 244, 306, 642 |
| HpyCH4IV | ACGT | 1 cut(s) | 520 |
| HpyCH4V | TGCA | 4 cut(s) | 269, 554, 619, 632 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 532, 554, 563, 616 |
| HpyF3I | CTNAG | 5 cut(s) | 77, 253, 297, 441, 606 |
| HpySE526I | ACGT | 1 cut(s) | 520 |
| Ksp22I | TGATCA | 1 cut(s) | 84 |
| KspAI | GTTAAC | 1 cut(s) | 436 |
| Kzo9I | GATC | 5 cut(s) | 84, 232, 247, 476, 503 |
| LguI | GCTCTTC | 2 cut(s) | 490, 583 |
| LmnI | GCTCC | 2 cut(s) | 178, 532 |
| LpnPI | CCDG | 8 cut(s) | 32, 84, 111, 398, 478, 567, 586, 608 |
| Lsp1109I | GCAGC | 2 cut(s) | 566, 631 |
| LweI | GCATC | 1 cut(s) | 541 |
| MaeII | ACGT | 1 cut(s) | 520 |
| MaeIII | GTNAC | 2 cut(s) | 42, 322 |
| MalI | GATC | 5 cut(s) | 86, 234, 249, 478, 505 |
| MbiI | CCGCTC | 1 cut(s) | 181 |
| MboI | GATC | 5 cut(s) | 84, 232, 247, 476, 503 |
| MboII | GAAGA | 2 cut(s) | 477, 570 |
| MfeI | CAATTG | 1 cut(s) | 378 |
| MhlI | GDGCHC | 1 cut(s) | 53 |
| MluCI | AATT | 5 cut(s) | 124, 198, 378, 421, 494 |
| MlyI | GAGTC | 1 cut(s) | 181 |
| MmeI | TCCRAC | 2 cut(s) | 193, 430 |
| MnlI | CCTC | 4 cut(s) | 200, 231, 448, 613 |
| MseI | TTAA | 1 cut(s) | 435 |
| MspI | CCGG | 1 cut(s) | 573 |
| MspR9I | CCNGG | 2 cut(s) | 99, 573 |
| MunI | CAATTG | 1 cut(s) | 378 |
| Mva1269I | GAATGC | 1 cut(s) | 222 |
| MvaI | CCWGG | 1 cut(s) | 99 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 532, 554, 563, 616 |
| NciI | CCSGG | 1 cut(s) | 573 |
| NdeII | GATC | 5 cut(s) | 84, 232, 247, 476, 503 |
| NlaIV | GGNNCC | 5 cut(s) | 146, 158, 463, 534, 591 |
| NmuCI | GTSAC | 1 cut(s) | 42 |
| PaeR7I | CTCGAG | 1 cut(s) | 204 |
| PciSI | GCTCTTC | 2 cut(s) | 490, 583 |
| PctI | GAATGC | 1 cut(s) | 222 |
| PkrI | GCNGC | 3 cut(s) | 183, 556, 621 |
| PleI | GAGTC | 1 cut(s) | 181 |
| PpsI | GAGTC | 1 cut(s) | 181 |
| PpuMI | RGGWCCY | 2 cut(s) | 145, 157 |
| PsiI | TTATAA | 1 cut(s) | 120 |
| Psp1406I | AACGTT | 1 cut(s) | 520 |
| Psp5II | RGGWCCY | 2 cut(s) | 145, 157 |
| Psp6I | CCWGG | 1 cut(s) | 97 |
| PspGI | CCWGG | 1 cut(s) | 97 |
| PspN4I | GGNNCC | 5 cut(s) | 146, 158, 463, 534, 591 |
| PspPI | GGNCC | 2 cut(s) | 145, 157 |
| PspPPI | RGGWCCY | 2 cut(s) | 145, 157 |
| PstI | CTGCAG | 1 cut(s) | 634 |
| PstNI | CAGNNNCTG | 1 cut(s) | 304 |
| RsaI | GTAC | 1 cut(s) | 375 |
| RsaNI | GTAC | 1 cut(s) | 374 |
| SapI | GCTCTTC | 2 cut(s) | 490, 583 |
| SaqAI | TTAA | 1 cut(s) | 435 |
| SatI | GCNGC | 3 cut(s) | 182, 555, 620 |
| Sau3AI | GATC | 5 cut(s) | 84, 232, 247, 476, 503 |
| Sau96I | GGNCC | 2 cut(s) | 145, 157 |
| SchI | GAGTC | 1 cut(s) | 181 |
| ScrFI | CCNGG | 2 cut(s) | 99, 573 |
| SduI | GDGCHC | 1 cut(s) | 53 |
| SetI | ASST | 4 cut(s) | 162, 262, 523, 605 |
| SfaNI | GCATC | 1 cut(s) | 541 |
| SfcI | CTRYAG | 2 cut(s) | 630, 641 |
| Sfr274I | CTCGAG | 1 cut(s) | 204 |
| SinI | GGWCC | 2 cut(s) | 145, 157 |
| SlaI | CTCGAG | 1 cut(s) | 204 |
| SmlI | CTYRAG | 1 cut(s) | 204 |
| SmoI | CTYRAG | 1 cut(s) | 204 |
| Sse9I | AATT | 5 cut(s) | 124, 198, 378, 421, 494 |
| SsiI | CCGC | 2 cut(s) | 181, 593 |
| StyD4I | CCNGG | 2 cut(s) | 97, 571 |
| TaaI | ACNGT | 3 cut(s) | 244, 306, 642 |
| TaiI | ACGT | 1 cut(s) | 523 |
| TaqI | TCGA | 1 cut(s) | 205 |
| TasI | AATT | 5 cut(s) | 124, 198, 378, 421, 494 |
| TauI | GCSGC | 1 cut(s) | 184 |
| Tru1I | TTAA | 1 cut(s) | 435 |
| Tru9I | TTAA | 1 cut(s) | 435 |
| TscAI | CASTG | 4 cut(s) | 51, 249, 445, 645 |
| TseFI | GTSAC | 1 cut(s) | 42 |
| TseI | GCWGC | 2 cut(s) | 554, 619 |
| Tsp45I | GTSAC | 1 cut(s) | 42 |
| TspDTI | ATGAA | 2 cut(s) | 47, 381 |
| TspGWI | ACGGA | 2 cut(s) | 308, 545 |
| TspRI | CASTG | 4 cut(s) | 51, 249, 445, 645 |
| VpaK11BI | GGWCC | 2 cut(s) | 145, 157 |
| XapI | RAATTY | 3 cut(s) | 124, 198, 494 |
| XhoI | CTCGAG | 1 cut(s) | 204 |