Domain of unknown function (DUF4283)
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| zf-CCHC_4 | PF14392 | 81 - 116 | 1.2e-07 | Zinc knuckle |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 421 |
| AccII | CGCG | 1 cut(s) | 546 |
| AciI | CCGC | 1 cut(s) | 134 |
| AclI | AACGTT | 1 cut(s) | 333 |
| AcoI | YGGCCR | 1 cut(s) | 73 |
| AflII | CTTAAG | 1 cut(s) | 173 |
| AgsI | TTSAA | 1 cut(s) | 275 |
| AjnI | CCWGG | 1 cut(s) | 178 |
| AluBI | AGCT | 3 cut(s) | 120, 349, 368 |
| AluI | AGCT | 3 cut(s) | 120, 349, 368 |
| Alw26I | GTCTC | 1 cut(s) | 296 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 371 |
| AoxI | GGCC | 1 cut(s) | 73 |
| ApeKI | GCWGC | 2 cut(s) | 5, 365 |
| AspS9I | GGNCC | 1 cut(s) | 530 |
| AsuHPI | GGTGA | 1 cut(s) | 77 |
| AvaII | GGWCC | 1 cut(s) | 530 |
| BaeGI | GKGCMC | 1 cut(s) | 330 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 274, 307 |
| BalI | TGGCCA | 1 cut(s) | 75 |
| BbsI | GAAGAC | 1 cut(s) | 434 |
| BbvI | GCAGC | 2 cut(s) | 17, 377 |
| BccI | CCATC | 2 cut(s) | 385, 478 |
| BciT130I | CCWGG | 1 cut(s) | 180 |
| BciVI | GTATCC | 3 cut(s) | 98, 177, 275 |
| BcoDI | GTCTC | 1 cut(s) | 296 |
| BfaI | CTAG | 2 cut(s) | 144, 522 |
| BfmI | CTRYAG | 1 cut(s) | 566 |
| BfrI | CTTAAG | 1 cut(s) | 173 |
| BfuI | GTATCC | 3 cut(s) | 98, 177, 275 |
| BisI | GCNGC | 3 cut(s) | 6, 135, 366 |
| BlsI | GCNGC | 3 cut(s) | 7, 136, 367 |
| Bme1390I | CCNGG | 1 cut(s) | 180 |
| Bme18I | GGWCC | 1 cut(s) | 530 |
| BmgT120I | GGNCC | 1 cut(s) | 530 |
| BmiI | GGNNCC | 1 cut(s) | 531 |
| BmrFI | CCNGG | 1 cut(s) | 180 |
| BmsI | GCATC | 2 cut(s) | 508, 559 |
| BpiI | GAAGAC | 1 cut(s) | 434 |
| BsaJI | CCNNGG | 2 cut(s) | 9, 179 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 249, 279 |
| Bse3DI | GCAATG | 1 cut(s) | 325 |
| BseBI | CCWGG | 1 cut(s) | 180 |
| BseDI | CCNNGG | 2 cut(s) | 9, 179 |
| BseMI | GCAATG | 1 cut(s) | 325 |
| BseMII | CTCAG | 2 cut(s) | 179, 450 |
| BseRI | GAGGAG | 2 cut(s) | 545, 548 |
| BseSI | GKGCMC | 1 cut(s) | 330 |
| BseXI | GCAGC | 2 cut(s) | 17, 377 |
| Bsh1236I | CGCG | 1 cut(s) | 546 |
| BshFI | GGCC | 1 cut(s) | 75 |
| BsmAI | GTCTC | 1 cut(s) | 296 |
| BsmBI | CGTCTC | 1 cut(s) | 296 |
| BsmI | GAATGC | 1 cut(s) | 517 |
| BsnI | GGCC | 1 cut(s) | 75 |
| Bsp1286I | GDGCHC | 1 cut(s) | 330 |
| BspACI | CCGC | 1 cut(s) | 134 |
| BspANI | GGCC | 1 cut(s) | 75 |
| BspCNI | CTCAG | 2 cut(s) | 180, 451 |
| BspFNI | CGCG | 1 cut(s) | 546 |
| BspLI | GGNNCC | 1 cut(s) | 531 |
| BspTI | CTTAAG | 1 cut(s) | 173 |
| BsrDI | GCAATG | 1 cut(s) | 325 |
| BssECI | CCNNGG | 2 cut(s) | 9, 179 |
| BssT1I | CCWWGG | 1 cut(s) | 9 |
| Bst2UI | CCWGG | 1 cut(s) | 180 |
| Bst4CI | ACNGT | 1 cut(s) | 382 |
| BstAFI | CTTAAG | 1 cut(s) | 173 |
| BstC8I | GCNNGC | 3 cut(s) | 308, 544, 548 |
| BstDEI | CTNAG | 2 cut(s) | 188, 459 |
| BstFNI | CGCG | 1 cut(s) | 546 |
| BstMAI | GTCTC | 1 cut(s) | 296 |
| BstNI | CCWGG | 1 cut(s) | 180 |
| BstSCI | CCNGG | 1 cut(s) | 178 |
| BstSFI | CTRYAG | 1 cut(s) | 566 |
| BstSLI | GKGCMC | 1 cut(s) | 330 |
| BstUI | CGCG | 1 cut(s) | 546 |
| BstV1I | GCAGC | 2 cut(s) | 17, 377 |
| BstV2I | GAAGAC | 1 cut(s) | 434 |
| BsuI | GTATCC | 3 cut(s) | 98, 177, 275 |
| BsuRI | GGCC | 1 cut(s) | 75 |
| BtsI | GCAGTG | 1 cut(s) | 578 |
| BtsIMutI | CAGTG | 1 cut(s) | 578 |
| Cac8I | GCNNGC | 3 cut(s) | 308, 544, 548 |
| CaiI | CAGNNNCTG | 1 cut(s) | 371 |
| Cfr13I | GGNCC | 1 cut(s) | 530 |
| CseI | GACGC | 2 cut(s) | 278, 404 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 216, 251 |
| CviAII | CATG | 3 cut(s) | 94, 230, 362 |
| CviJI | RGCY | 8 cut(s) | 8, 75, 120, 137, 178, 239, 349, 368 |
| CviKI_1 | RGCY | 8 cut(s) | 8, 75, 120, 137, 178, 239, 349, 368 |
| DdeI | CTNAG | 2 cut(s) | 188, 459 |
| EaeI | YGGCCR | 1 cut(s) | 73 |
| Eco130I | CCWWGG | 1 cut(s) | 9 |
| Eco47I | GGWCC | 1 cut(s) | 530 |
| EcoO109I | RGGNCCY | 1 cut(s) | 530 |
| EcoRII | CCWGG | 1 cut(s) | 178 |
| EcoT14I | CCWWGG | 1 cut(s) | 9 |
| ErhI | CCWWGG | 1 cut(s) | 9 |
| Esp3I | CGTCTC | 1 cut(s) | 296 |
| FaeI | CATG | 3 cut(s) | 97, 233, 365 |
| FaiI | YATR | 4 cut(s) | 95, 231, 363, 500 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 92, 124 |
| FatI | CATG | 3 cut(s) | 93, 229, 361 |
| FblI | GTMKAC | 1 cut(s) | 421 |
| Fnu4HI | GCNGC | 3 cut(s) | 6, 135, 366 |
| Fsp4HI | GCNGC | 3 cut(s) | 6, 135, 366 |
| FspBI | CTAG | 2 cut(s) | 144, 522 |
| GluI | GCNGC | 3 cut(s) | 6, 135, 366 |
| HaeIII | GGCC | 1 cut(s) | 75 |
| HgaI | GACGC | 2 cut(s) | 278, 404 |
| Hin1II | CATG | 3 cut(s) | 97, 233, 365 |
| HincII | GTYRAC | 1 cut(s) | 422 |
| HindII | GTYRAC | 1 cut(s) | 422 |
| HindIII | AAGCTT | 1 cut(s) | 347 |
| HinfI | GANTC | 1 cut(s) | 583 |
| HphI | GGTGA | 1 cut(s) | 77 |
| Hpy166II | GTNNAC | 1 cut(s) | 422 |
| Hpy188I | TCNGA | 3 cut(s) | 34, 378, 588 |
| Hpy8I | GTNNAC | 1 cut(s) | 422 |
| Hpy99I | CGWCG | 3 cut(s) | 420, 423, 426 |
| HpyAV | CCTTC | 2 cut(s) | 151, 543 |
| HpyCH4III | ACNGT | 1 cut(s) | 382 |
| HpyCH4IV | ACGT | 1 cut(s) | 333 |
| HpyCH4V | TGCA | 4 cut(s) | 164, 365, 449, 515 |
| HpyF3I | CTNAG | 2 cut(s) | 188, 459 |
| HpySE526I | ACGT | 1 cut(s) | 333 |
| Hsp92II | CATG | 3 cut(s) | 97, 233, 365 |
| LmnI | GCTCC | 1 cut(s) | 499 |
| LpnPI | CCDG | 3 cut(s) | 165, 192, 357 |
| Lsp1109I | GCAGC | 2 cut(s) | 17, 377 |
| LweI | GCATC | 2 cut(s) | 508, 559 |
| MaeI | CTAG | 2 cut(s) | 144, 522 |
| MaeII | ACGT | 1 cut(s) | 333 |
| MaeIII | GTNAC | 2 cut(s) | 245, 334 |
| MboII | GAAGA | 3 cut(s) | 18, 439, 493 |
| MfeI | CAATTG | 1 cut(s) | 165 |
| MhlI | GDGCHC | 1 cut(s) | 330 |
| MlsI | TGGCCA | 1 cut(s) | 75 |
| MluCI | AATT | 4 cut(s) | 84, 165, 233, 589 |
| MluNI | TGGCCA | 1 cut(s) | 75 |
| MmeI | TCCRAC | 1 cut(s) | 259 |
| MnlI | CCTC | 5 cut(s) | 183, 234, 520, 566, 569 |
| Mox20I | TGGCCA | 1 cut(s) | 75 |
| MscI | TGGCCA | 1 cut(s) | 75 |
| MseI | TTAA | 1 cut(s) | 174 |
| Msp20I | TGGCCA | 1 cut(s) | 75 |
| MspCI | CTTAAG | 1 cut(s) | 173 |
| MspR9I | CCNGG | 1 cut(s) | 180 |
| MunI | CAATTG | 1 cut(s) | 165 |
| Mva1269I | GAATGC | 1 cut(s) | 517 |
| MvaI | CCWGG | 1 cut(s) | 180 |
| MvnI | CGCG | 1 cut(s) | 546 |
| NlaIII | CATG | 3 cut(s) | 97, 233, 365 |
| NlaIV | GGNNCC | 1 cut(s) | 531 |
| NmuCI | GTSAC | 1 cut(s) | 245 |
| PctI | GAATGC | 1 cut(s) | 517 |
| PfeI | GAWTC | 1 cut(s) | 583 |
| PkrI | GCNGC | 3 cut(s) | 7, 136, 367 |
| PpuMI | RGGWCCY | 1 cut(s) | 530 |
| Psp1406I | AACGTT | 1 cut(s) | 333 |
| Psp5II | RGGWCCY | 1 cut(s) | 530 |
| Psp6I | CCWGG | 1 cut(s) | 178 |
| PspGI | CCWGG | 1 cut(s) | 178 |
| PspN4I | GGNNCC | 1 cut(s) | 531 |
| PspPI | GGNCC | 1 cut(s) | 530 |
| PspPPI | RGGWCCY | 1 cut(s) | 530 |
| PstNI | CAGNNNCTG | 1 cut(s) | 371 |
| SalI | GTCGAC | 1 cut(s) | 420 |
| SaqAI | TTAA | 1 cut(s) | 174 |
| SatI | GCNGC | 3 cut(s) | 6, 135, 366 |
| Sau96I | GGNCC | 1 cut(s) | 530 |
| ScrFI | CCNGG | 1 cut(s) | 180 |
| SduI | GDGCHC | 1 cut(s) | 330 |
| SetI | ASST | 5 cut(s) | 122, 336, 351, 370, 403 |
| SfaNI | GCATC | 2 cut(s) | 508, 559 |
| SfcI | CTRYAG | 1 cut(s) | 566 |
| SgrDI | CGTCGACG | 1 cut(s) | 420 |
| SinI | GGWCC | 1 cut(s) | 530 |
| SmlI | CTYRAG | 1 cut(s) | 173 |
| SmoI | CTYRAG | 1 cut(s) | 173 |
| Sse9I | AATT | 4 cut(s) | 84, 165, 233, 589 |
| SsiI | CCGC | 1 cut(s) | 134 |
| SspMI | CTAG | 2 cut(s) | 144, 522 |
| StyD4I | CCNGG | 1 cut(s) | 178 |
| StyI | CCWWGG | 1 cut(s) | 9 |
| TaaI | ACNGT | 1 cut(s) | 382 |
| TaiI | ACGT | 1 cut(s) | 336 |
| TaqI | TCGA | 1 cut(s) | 421 |
| TasI | AATT | 4 cut(s) | 84, 165, 233, 589 |
| TauI | GCSGC | 1 cut(s) | 137 |
| TfiI | GAWTC | 1 cut(s) | 583 |
| Tru1I | TTAA | 1 cut(s) | 174 |
| Tru9I | TTAA | 1 cut(s) | 174 |
| TscAI | CASTG | 1 cut(s) | 578 |
| TseFI | GTSAC | 1 cut(s) | 245 |
| TseI | GCWGC | 2 cut(s) | 5, 365 |
| Tsp45I | GTSAC | 1 cut(s) | 245 |
| TspDTI | ATGAA | 3 cut(s) | 18, 246, 525 |
| TspGWI | ACGGA | 2 cut(s) | 270, 439 |
| TspRI | CASTG | 1 cut(s) | 578 |
| Vha464I | CTTAAG | 1 cut(s) | 173 |
| VpaK11BI | GGWCC | 1 cut(s) | 530 |
| XmiI | GTMKAC | 1 cut(s) | 421 |
| XspI | CTAG | 2 cut(s) | 144, 522 |