Domain of unknown function (DUF4283)
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| zf-CCHC_4 | PF14392 | 155 - 202 | 1.8e-08 | Zinc knuckle |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 865 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 862 |
| AciI | CCGC | 5 cut(s) | 26, 235, 381, 479, 679 |
| AclWI | GGATC | 7 cut(s) | 236, 342, 363, 404, 417, 846, 847 |
| AcsI | RAATTY | 2 cut(s) | 159, 450 |
| AcyI | GRCGYC | 2 cut(s) | 272, 682 |
| AfaI | GTAC | 1 cut(s) | 918 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 180, 187, 406, 678, 862 |
| AflIII | ACRYGT | 2 cut(s) | 599, 871 |
| AgsI | TTSAA | 3 cut(s) | 15, 133, 810 |
| AjnI | CCWGG | 2 cut(s) | 846, 922 |
| Alw26I | GTCTC | 1 cut(s) | 154 |
| AlwI | GGATC | 7 cut(s) | 236, 342, 363, 404, 417, 846, 847 |
| AoxI | GGCC | 1 cut(s) | 795 |
| ApoI | RAATTY | 2 cut(s) | 159, 450 |
| AspS9I | GGNCC | 2 cut(s) | 779, 796 |
| AsuC2I | CCSGG | 1 cut(s) | 182 |
| AsuHPI | GGTGA | 4 cut(s) | 276, 334, 527, 862 |
| AsuII | TTCGAA | 1 cut(s) | 372 |
| AsuNHI | GCTAGC | 1 cut(s) | 593 |
| AvaII | GGWCC | 1 cut(s) | 779 |
| AxyI | CCTNAGG | 1 cut(s) | 555 |
| BamHI | GGATCC | 1 cut(s) | 409 |
| BanI | GGYRCC | 1 cut(s) | 865 |
| BanII | GRGCYC | 1 cut(s) | 174 |
| BbsI | GAAGAC | 1 cut(s) | 741 |
| BbvCI | CCTCAGC | 1 cut(s) | 72 |
| BccI | CCATC | 2 cut(s) | 16, 295 |
| BciT130I | CCWGG | 2 cut(s) | 848, 924 |
| BcnI | CCSGG | 1 cut(s) | 182 |
| BcoDI | GTCTC | 1 cut(s) | 154 |
| BfaI | CTAG | 3 cut(s) | 338, 594, 815 |
| BfmI | CTRYAG | 1 cut(s) | 504 |
| BglII | AGATCT | 1 cut(s) | 115 |
| BisI | GCNGC | 4 cut(s) | 236, 381, 479, 680 |
| BlsI | GCNGC | 4 cut(s) | 237, 382, 480, 681 |
| Bme1390I | CCNGG | 3 cut(s) | 182, 848, 924 |
| Bme18I | GGWCC | 1 cut(s) | 779 |
| BmgT120I | GGNCC | 2 cut(s) | 779, 796 |
| BmiI | GGNNCC | 7 cut(s) | 126, 171, 411, 615, 780, 798, 867 |
| BmrFI | CCNGG | 3 cut(s) | 182, 848, 924 |
| BmrI | ACTGGG | 1 cut(s) | 15 |
| BmsI | GCATC | 2 cut(s) | 185, 752 |
| BmtI | GCTAGC | 1 cut(s) | 597 |
| BmuI | ACTGGG | 1 cut(s) | 15 |
| BpiI | GAAGAC | 1 cut(s) | 741 |
| Bpu10I | CCTNAGC | 2 cut(s) | 72, 254 |
| Bpu14I | TTCGAA | 1 cut(s) | 372 |
| BpuEI | CTTGAG | 1 cut(s) | 683 |
| BpuMI | CCSGG | 1 cut(s) | 182 |
| BsaBI | GATNNNNATC | 1 cut(s) | 497 |
| BsaHI | GRCGYC | 2 cut(s) | 272, 682 |
| BsaJI | CCNNGG | 2 cut(s) | 181, 753 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 34, 64, 287, 317, 731, 761 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 180, 187, 406, 678, 862 |
| Bse118I | RCCGGY | 2 cut(s) | 121, 616 |
| Bse1I | ACTGG | 4 cut(s) | 10, 192, 411, 782 |
| Bse21I | CCTNAGG | 1 cut(s) | 555 |
| Bse3DI | GCAATG | 1 cut(s) | 108 |
| Bse8I | GATNNNNATC | 1 cut(s) | 497 |
| BseBI | CCWGG | 2 cut(s) | 848, 924 |
| BseDI | CCNNGG | 2 cut(s) | 181, 753 |
| BseJI | GATNNNNATC | 1 cut(s) | 497 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 180, 187, 406, 678, 862 |
| BseMI | GCAATG | 1 cut(s) | 108 |
| BseMII | CTCAG | 4 cut(s) | 63, 156, 546, 806 |
| BseNI | ACTGG | 4 cut(s) | 10, 192, 411, 782 |
| BseRI | GAGGAG | 3 cut(s) | 39, 182, 842 |
| Bsh1285I | CGRYCG | 2 cut(s) | 692, 710 |
| BshFI | GGCC | 1 cut(s) | 797 |
| BshNI | GGYRCC | 1 cut(s) | 865 |
| BsiEI | CGRYCG | 2 cut(s) | 692, 710 |
| BsiSI | CCGG | 4 cut(s) | 122, 181, 275, 617 |
| BslFI | GGGAC | 1 cut(s) | 198 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 180, 187, 406, 678, 862 |
| BsmAI | GTCTC | 1 cut(s) | 154 |
| BsmFI | GGGAC | 1 cut(s) | 198 |
| BsmI | GAATGC | 1 cut(s) | 667 |
| BsnI | GGCC | 1 cut(s) | 797 |
| Bsp119I | TTCGAA | 1 cut(s) | 372 |
| Bsp1286I | GDGCHC | 1 cut(s) | 174 |
| BspACI | CCGC | 5 cut(s) | 26, 235, 381, 479, 679 |
| BspANI | GGCC | 1 cut(s) | 797 |
| BspCNI | CTCAG | 4 cut(s) | 64, 157, 547, 805 |
| BspLI | GGNNCC | 7 cut(s) | 126, 171, 411, 615, 780, 798, 867 |
| BspOI | GCTAGC | 1 cut(s) | 597 |
| BspPI | GGATC | 7 cut(s) | 236, 342, 363, 404, 417, 846, 847 |
| BspT104I | TTCGAA | 1 cut(s) | 372 |
| BspT107I | GGYRCC | 1 cut(s) | 865 |
| BsrDI | GCAATG | 1 cut(s) | 108 |
| BsrFI | RCCGGY | 2 cut(s) | 121, 616 |
| BsrI | ACTGG | 4 cut(s) | 10, 192, 411, 782 |
| BssAI | RCCGGY | 2 cut(s) | 121, 616 |
| BssECI | CCNNGG | 2 cut(s) | 181, 753 |
| BssNI | GRCGYC | 2 cut(s) | 272, 682 |
| BssT1I | CCWWGG | 1 cut(s) | 753 |
| Bst2UI | CCWGG | 2 cut(s) | 848, 924 |
| Bst4CI | ACNGT | 3 cut(s) | 32, 657, 736 |
| Bst6I | CTCTTC | 2 cut(s) | 132, 907 |
| BstACI | GRCGYC | 2 cut(s) | 272, 682 |
| BstBI | TTCGAA | 1 cut(s) | 372 |
| BstC8I | GCNNGC | 4 cut(s) | 251, 395, 595, 618 |
| BstDEI | CTNAG | 6 cut(s) | 72, 165, 254, 555, 792, 911 |
| BstMAI | GTCTC | 1 cut(s) | 154 |
| BstMCI | CGRYCG | 2 cut(s) | 692, 710 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 83, 603, 794 |
| BstNI | CCWGG | 2 cut(s) | 848, 924 |
| BstNSI | RCATGY | 2 cut(s) | 603, 875 |
| BstSCI | CCNGG | 3 cut(s) | 180, 846, 922 |
| BstSFI | CTRYAG | 1 cut(s) | 504 |
| BstV2I | GAAGAC | 1 cut(s) | 741 |
| BstX2I | RGATCY | 3 cut(s) | 115, 334, 409 |
| BstYI | RGATCY | 3 cut(s) | 115, 334, 409 |
| Bsu36I | CCTNAGG | 1 cut(s) | 555 |
| BsuRI | GGCC | 1 cut(s) | 797 |
| BtsIMutI | CAGTG | 1 cut(s) | 741 |
| Cac8I | GCNNGC | 4 cut(s) | 251, 395, 595, 618 |
| Cfr10I | RCCGGY | 2 cut(s) | 121, 616 |
| Cfr13I | GGNCC | 2 cut(s) | 779, 796 |
| CseI | GACGC | 2 cut(s) | 280, 671 |
| CsiI | ACCWGGT | 2 cut(s) | 846, 922 |
| Csp6I | GTAC | 1 cut(s) | 917 |
| CviAII | CATG | 3 cut(s) | 587, 600, 872 |
| CviQI | GTAC | 1 cut(s) | 917 |
| DdeI | CTNAG | 6 cut(s) | 72, 165, 254, 555, 792, 911 |
| Eam1104I | CTCTTC | 2 cut(s) | 132, 907 |
| EarI | CTCTTC | 2 cut(s) | 132, 907 |
| EciI | GGCGGA | 1 cut(s) | 41 |
| Eco130I | CCWWGG | 1 cut(s) | 753 |
| Eco24I | GRGCYC | 1 cut(s) | 174 |
| Eco47I | GGWCC | 1 cut(s) | 779 |
| Eco81I | CCTNAGG | 1 cut(s) | 555 |
| EcoO109I | RGGNCCY | 1 cut(s) | 796 |
| EcoRII | CCWGG | 2 cut(s) | 846, 922 |
| EcoT14I | CCWWGG | 1 cut(s) | 753 |
| EcoT38I | GRGCYC | 1 cut(s) | 174 |
| ErhI | CCWWGG | 1 cut(s) | 753 |
| FaeI | CATG | 3 cut(s) | 590, 603, 875 |
| FaqI | GGGAC | 1 cut(s) | 198 |
| FatI | CATG | 3 cut(s) | 586, 599, 871 |
| Fnu4HI | GCNGC | 4 cut(s) | 236, 381, 479, 680 |
| FriOI | GRGCYC | 1 cut(s) | 174 |
| Fsp4HI | GCNGC | 4 cut(s) | 236, 381, 479, 680 |
| FspBI | CTAG | 3 cut(s) | 338, 594, 815 |
| GluI | GCNGC | 4 cut(s) | 236, 381, 479, 680 |
| HaeIII | GGCC | 1 cut(s) | 797 |
| HapII | CCGG | 4 cut(s) | 122, 181, 275, 617 |
| HgaI | GACGC | 2 cut(s) | 280, 671 |
| Hin1I | GRCGYC | 2 cut(s) | 272, 682 |
| Hin1II | CATG | 3 cut(s) | 590, 603, 875 |
| HinfI | GANTC | 4 cut(s) | 89, 424, 498, 545 |
| HpaII | CCGG | 4 cut(s) | 122, 181, 275, 617 |
| HphI | GGTGA | 4 cut(s) | 276, 334, 527, 862 |
| Hpy166II | GTNNAC | 2 cut(s) | 460, 917 |
| Hpy188I | TCNGA | 2 cut(s) | 166, 630 |
| Hpy8I | GTNNAC | 2 cut(s) | 460, 917 |
| Hpy99I | CGWCG | 2 cut(s) | 687, 690 |
| HpyCH4III | ACNGT | 3 cut(s) | 32, 657, 736 |
| HpyCH4IV | ACGT | 1 cut(s) | 462 |
| HpyCH4V | TGCA | 4 cut(s) | 86, 113, 198, 788 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 83, 603, 794 |
| HpyF3I | CTNAG | 6 cut(s) | 72, 165, 254, 555, 792, 911 |
| HpySE526I | ACGT | 1 cut(s) | 462 |
| Hsp92I | GRCGYC | 2 cut(s) | 272, 682 |
| Hsp92II | CATG | 3 cut(s) | 590, 603, 875 |
| KroI | GCCGGC | 1 cut(s) | 616 |
| KroNI | GCCGGC | 1 cut(s) | 618 |
| LmnI | GCTCC | 4 cut(s) | 169, 613, 758, 829 |
| LweI | GCATC | 2 cut(s) | 185, 752 |
| MabI | ACCWGGT | 2 cut(s) | 846, 922 |
| MaeI | CTAG | 3 cut(s) | 338, 594, 815 |
| MaeII | ACGT | 1 cut(s) | 462 |
| MaeIII | GTNAC | 2 cut(s) | 32, 657 |
| MboII | GAAGA | 5 cut(s) | 149, 740, 741, 894, 897 |
| MflI | RGATCY | 3 cut(s) | 115, 334, 409 |
| MhlI | GDGCHC | 1 cut(s) | 174 |
| MluCI | AATT | 6 cut(s) | 100, 159, 205, 387, 450, 891 |
| MroNI | GCCGGC | 1 cut(s) | 616 |
| MslI | CAYNNNNRTG | 1 cut(s) | 66 |
| MspA1I | CMGCKG | 1 cut(s) | 679 |
| MspI | CCGG | 4 cut(s) | 122, 181, 275, 617 |
| MspR9I | CCNGG | 3 cut(s) | 182, 848, 924 |
| Mva1269I | GAATGC | 1 cut(s) | 667 |
| MvaI | CCWGG | 2 cut(s) | 848, 924 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 83, 603, 794 |
| NaeI | GCCGGC | 1 cut(s) | 618 |
| NciI | CCSGG | 1 cut(s) | 182 |
| NgoMIV | GCCGGC | 1 cut(s) | 616 |
| NheI | GCTAGC | 1 cut(s) | 593 |
| NlaIII | CATG | 3 cut(s) | 590, 603, 875 |
| NlaIV | GGNNCC | 7 cut(s) | 126, 171, 411, 615, 780, 798, 867 |
| NmuCI | GTSAC | 1 cut(s) | 657 |
| NspI | RCATGY | 2 cut(s) | 603, 875 |
| NspV | TTCGAA | 1 cut(s) | 372 |
| PciI | ACATGT | 2 cut(s) | 599, 871 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 703, 712 |
| PctI | GAATGC | 1 cut(s) | 667 |
| PdiI | GCCGGC | 1 cut(s) | 618 |
| PfeI | GAWTC | 4 cut(s) | 89, 424, 498, 545 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 862 |
| PkrI | GCNGC | 4 cut(s) | 237, 382, 480, 681 |
| Ple19I | CGATCG | 2 cut(s) | 692, 710 |
| PscI | ACATGT | 2 cut(s) | 599, 871 |
| Psp6I | CCWGG | 2 cut(s) | 846, 922 |
| PspGI | CCWGG | 2 cut(s) | 846, 922 |
| PspN4I | GGNNCC | 7 cut(s) | 126, 171, 411, 615, 780, 798, 867 |
| PspPI | GGNCC | 2 cut(s) | 779, 796 |
| PsuI | RGATCY | 3 cut(s) | 115, 334, 409 |
| PvuI | CGATCG | 2 cut(s) | 692, 710 |
| RsaI | GTAC | 1 cut(s) | 918 |
| RsaNI | GTAC | 1 cut(s) | 917 |
| RseI | CAYNNNNRTG | 1 cut(s) | 66 |
| SatI | GCNGC | 4 cut(s) | 236, 381, 479, 680 |
| Sau96I | GGNCC | 2 cut(s) | 779, 796 |
| ScrFI | CCNGG | 3 cut(s) | 182, 848, 924 |
| SduI | GDGCHC | 1 cut(s) | 174 |
| SetI | ASST | 8 cut(s) | 49, 329, 368, 465, 522, 561, 849, 928 |
| SexAI | ACCWGGT | 2 cut(s) | 846, 922 |
| SfaNI | GCATC | 2 cut(s) | 185, 752 |
| SfcI | CTRYAG | 1 cut(s) | 504 |
| SfuI | TTCGAA | 1 cut(s) | 372 |
| SinI | GGWCC | 1 cut(s) | 779 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 66 |
| SmlI | CTYRAG | 1 cut(s) | 662 |
| SmoI | CTYRAG | 1 cut(s) | 662 |
| Sse9I | AATT | 6 cut(s) | 100, 159, 205, 387, 450, 891 |
| SsiI | CCGC | 5 cut(s) | 26, 235, 381, 479, 679 |
| SspMI | CTAG | 3 cut(s) | 338, 594, 815 |
| StyD4I | CCNGG | 3 cut(s) | 180, 846, 922 |
| StyI | CCWWGG | 1 cut(s) | 753 |
| TaaI | ACNGT | 3 cut(s) | 32, 657, 736 |
| TaiI | ACGT | 1 cut(s) | 465 |
| TaqI | TCGA | 6 cut(s) | 290, 372, 688, 692, 706, 710 |
| TasI | AATT | 6 cut(s) | 100, 159, 205, 387, 450, 891 |
| TauI | GCSGC | 4 cut(s) | 238, 383, 481, 682 |
| TfiI | GAWTC | 4 cut(s) | 89, 424, 498, 545 |
| TscAI | CASTG | 1 cut(s) | 741 |
| TseFI | GTSAC | 1 cut(s) | 657 |
| Tsp45I | GTSAC | 1 cut(s) | 657 |
| TspDTI | ATGAA | 2 cut(s) | 558, 884 |
| TspRI | CASTG | 1 cut(s) | 741 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 862 |
| VpaK11BI | GGWCC | 1 cut(s) | 779 |
| XapI | RAATTY | 2 cut(s) | 159, 450 |
| XceI | RCATGY | 2 cut(s) | 603, 875 |
| XspI | CTAG | 3 cut(s) | 338, 594, 815 |