Rorug05G0226500

Reverse transcriptase (RNA-dependent DNA polymerase)

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
Physical Location & Seq
Reverse (-)
23476326 .. 23478052
1727 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0226500.1

Sequence Viewer

Length: 876 bp
ATGTTTCTGTTAAACACAGTCGTCGATCAAGGGCATCTAGAGAATTCATTGATGCGATCTTTGCTTGTACAAGTTGGAGTACAAACAAGTAAAATATATGCTGCAGTGGCTAAACAACATGGGGGATATCAAAATATTGGATTTACAGAAAAGGTTCTTAGAAATCATTTTGATAAAGTGCGGCATTTGGAGCTAGCTGCAGGGGATGCTAATGCTATGCTTGACCTTTTTATGCACATGCAAGAAGAGAATCCCAATTTCTTTTATGCAATGGACTTGGATGAGGACCAACGTTTGAGAAATGTTTTTTGGGTTGATGCAAAAGGTCGTGAAGAATATAAGATTTTTGGAGACGTTGTTTCTTTTGATACTACATATATCACTAACAAGTACAAGATGCCATTTGCTCCGTTTATTGGTGTGAACAACCATTTTCTGTCTACACTACTTGGAGACGAGACTGCTTCAACTTTTGTTTGGTTAATGCAAACATGGCTGAGAGCAATGGGAGGAAAACCACCGGGTGCTATATTAACTGATCAAGACAAAGCCATGAAATCAGCCATTGCAGAGGTATTTCCAAATTCTCGACATCGCTTTTGTTTATGGCATATATTAATGAAAATCCCTCAAAAACTTGGTCAAGTAATCAAAGAAAATGAAGATTTTATGGAGATATTTGATAAATGCATTTACAATTCATGGACTAGTGAAGAGTTTGAGAAAGGATTGTGGGATATGATTGACAGATCTGAAAGCATCAATTCTTTCTTCAATAAATATGTGGGTAAGAAGACTACTTTGAAAGAGTTTGTTGGACAATACAATGTGGCTCTACAGGATAGACAAGAACAAGAAGCTCAAGCTGATTTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

291

Amino Acids

33.74

Weight (kDa)

5.53

Isoelectric Point (pI)

41.71

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ZSWIM1-3_RNaseH-like PF21056 83 - 197 3.2e-06 Zinc finger SWIM domain-containing protein 1/3, RNaseH-like domain
MULE PF10551 119 - 208 2e-26 MULE transposase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000044)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G07760 AT5G28823
fragaria_vesca FvH4_1g13572 FvH4_2g03281 FvH4_2g04691 FvH4_2g08332 FvH4_2g08333 FvH4_2g15313 FvH4_2g26101 FvH4_2g29541 FvH4_3g06911 FvH4_3g34351 FvH4_3g43733 FvH4_4g02432 FvH4_4g05601 FvH4_4g08213 FvH4_4g09961 FvH4_4g10131 FvH4_4g20001 FvH4_4g20002 FvH4_5g01051 FvH4_5g01401 FvH4_5g27943 FvH4_6g09220 FvH4_6g17383 FvH4_6g35491 FvH4_6g46421 FvH4_7g04151 FvH4_7g13962 FvH4_7g18611 FvH4_7g19491 FvH4_7g19511 FvH4_7g26562
malus_domestica MD06G1221600.v1.1
pyrus_communis pycom10g21150
rosa_chinensis RchiOBHm_Chr1g0337571 RchiOBHm_Chr2g0168771 RchiOBHm_Chr3g0453631 RchiOBHm_Chr6g0278581
rosa_laevigata RLG00000001899 RLG00000001925 RLG00000002026 RLG00000003410 RLG00000003767 RLG00000004304 RLG00000004473 RLG00000004677 RLG00000006856 RLG00000007994 RLG00000009888 RLG00000011627 RLG00000012174 RLG00000012217 RLG00000013118 RLG00000013736 RLG00000014194 RLG00000014251 RLG00000015011 RLG00000015057 RLG00000015235 RLG00000017416 RLG00000018052 RLG00000018537 RLG00000019968 RLG00000020096 RLG00000020263 RLG00000022606 RLG00000023119 RLG00000028111 RLG00000029686 RLG00000030126 RLG00000031124 RLG00000031236 RLG00000032766 RLG00000033171 RLG00000033548 RLG00000033987 RLG00000034062 RLG00000035115 RLG00000035863
rosa_multiflora Rmu_co8036712.1_g000001 Rmu_co8080248.1_g000001 Rmu_co8208334.1_g000001 Rmu_co8253451.1_g000001 Rmu_co8393241.1_g000001 Rmu_co8522225.1_g000005 Rmu_sc0000060.1_g000030 Rmu_sc0000060.1_g000031 Rmu_sc0000060.1_g000032 Rmu_sc0000090.1_g000008 Rmu_sc0000149.1_g000051 Rmu_sc0000149.1_g000058 Rmu_sc0000309.1_g000050 Rmu_sc0000370.1_g000022 Rmu_sc0000370.1_g000023 Rmu_sc0000370.1_g000024 Rmu_sc0000418.1_g000018 Rmu_sc0000427.1_g000014 Rmu_sc0000427.1_g000015 Rmu_sc0000434.1_g000008 Rmu_sc0000487.1_g000038 Rmu_sc0000487.1_g000039 Rmu_sc0000569.1_g000029 Rmu_sc0000580.1_g000097 Rmu_sc0000595.1_g000068 Rmu_sc0000607.1_g000027 Rmu_sc0000738.1_g000004 Rmu_sc0000758.1_g000001 Rmu_sc0000758.1_g000002 Rmu_sc0000870.1_g000019 Rmu_sc0000924.1_g000040 Rmu_sc0000924.1_g000041 Rmu_sc0000999.1_g000037 Rmu_sc0001001.1_g000001 Rmu_sc0001010.1_g000080 Rmu_sc0001075.1_g000041 Rmu_sc0001097.1_g000016 Rmu_sc0001173.1_g000020 Rmu_sc0001258.1_g000010 Rmu_sc0001425.1_g000031 Rmu_sc0001493.1_g000020 Rmu_sc0001493.1_g000021 Rmu_sc0001644.1_g000024 Rmu_sc0001648.1_g000039 Rmu_sc0001662.1_g000002 Rmu_sc0001849.1_g000046 Rmu_sc0001851.1_g000038 Rmu_sc0001861.1_g000006 Rmu_sc0001899.1_g000008 Rmu_sc0002231.1_g000023 Rmu_sc0002393.1_g000012 Rmu_sc0002515.1_g000010 Rmu_sc0002551.1_g000013 Rmu_sc0002680.1_g000029 Rmu_sc0002700.1_g000030 Rmu_sc0002700.1_g000031 Rmu_sc0002709.1_g000035 Rmu_sc0002779.1_g000017 Rmu_sc0003267.1_g000040 Rmu_sc0003306.1_g000009 Rmu_sc0003338.1_g000014 Rmu_sc0003522.1_g000038 Rmu_sc0003522.1_g000039 Rmu_sc0003653.1_g000031 Rmu_sc0003901.1_g000003 Rmu_sc0003920.1_g000009 Rmu_sc0004014.1_g000009 Rmu_sc0004016.1_g000013 Rmu_sc0004031.1_g000002 Rmu_sc0004106.1_g000001 Rmu_sc0004432.1_g000004 Rmu_sc0004481.1_g000020 Rmu_sc0004874.1_g000005 Rmu_sc0004928.1_g000005 Rmu_sc0005065.1_g000053 Rmu_sc0005091.1_g000005 Rmu_sc0005217.1_g000015 Rmu_sc0005242.1_g000002 Rmu_sc0005300.1_g000011 Rmu_sc0005400.1_g000004 Rmu_sc0005486.1_g000007 Rmu_sc0005527.1_g000015 Rmu_sc0006059.1_g000021 Rmu_sc0006087.1_g000004 Rmu_sc0006184.1_g000006 Rmu_sc0006184.1_g000007 Rmu_sc0006578.1_g000006 Rmu_sc0006730.1_g000010 Rmu_sc0006736.1_g000030 Rmu_sc0006736.1_g000033 Rmu_sc0007333.1_g000018 Rmu_sc0007856.1_g000010 Rmu_sc0008231.1_g000003 Rmu_sc0009862.1_g000012 Rmu_sc0010547.1_g000001 Rmu_sc0010547.1_g000003 Rmu_sc0010632.1_g000012 Rmu_sc0010747.1_g000008 Rmu_sc0011075.1_g000009 Rmu_sc0011565.1_g000004 Rmu_sc0011641.1_g000003 Rmu_sc0013102.1_g000013 Rmu_sc0013160.1_g000006 Rmu_sc0014846.1_g000004 Rmu_sc0017037.1_g000003 Rmu_sc0018203.1_g000001 Rmu_sc0018204.1_g000001 Rmu_sc0018348.1_g000001 Rmu_sc0019354.1_g000002 Rmu_sc0021630.1_g000002 Rmu_sc0022987.1_g000002 Rmu_sc0024469.1_g000005 Rmu_sc0033519.1_g000001 Rmu_sc0033519.1_g000002 Rmu_sc0033519.1_g000003 Rmu_sc0042775.1_g000001 Rmu_ssc0000110.1_g000003 Rmu_ssc0000110.1_g000004 Rmu_ssc0000126.1_g000068 Rmu_ssc0000200.1_g000007 Rmu_ssc0000295.1_g000003 Rmu_ssc0000295.1_g000004 Rmu_ssc0000299.1_g000010 Rmu_ssc0000308.1_g000024 Rmu_ssc0000339.1_g000006 Rmu_ssc0000385.1_g000012 Rmu_ssc0000409.1_g000004 Rmu_ssc0000421.1_g000004
rosa_roxburghii Rroxscaffold_156G00440360 Rroxscaffold_166G00440800 Rroxscaffold_1G00039040 Rroxscaffold_1G00039050 Rroxscaffold_1G00073950 Rroxscaffold_2G00091710 Rroxscaffold_2G00120050 Rroxscaffold_2G00122590 Rroxscaffold_3G00219700 Rroxscaffold_3G00264140 Rroxscaffold_4G00290600 Rroxscaffold_4G00323610 Rroxscaffold_4G00328460 Rroxscaffold_5G00343440 Rroxscaffold_5G00343570 Rroxscaffold_5G00378540 Rroxscaffold_5G00385090 Rroxscaffold_7G00169130 Rroxscaffold_7G00216420
rosa_rugosa Rorug01G0065800 Rorug01G0073500 Rorug01G0091700 Rorug01G0096500 Rorug01G0204700.1 Rorug01G0249100 Rorug01G0333800 Rorug01G0333900 Rorug01G0339500 Rorug01G0431300 Rorug02G0085400 Rorug02G0117500 Rorug02G0130900 Rorug02G0178800 Rorug02G0226700 Rorug02G0336300 Rorug02G0338700 Rorug02G0351400 Rorug02G0459900 Rorug03G0187000 Rorug03G0223700 Rorug03G0291300 Rorug03G0291300 Rorug03G0311100 Rorug03G0316900 Rorug03G0346000 Rorug04G0014500 Rorug04G0014600 Rorug04G0124100 Rorug04G0136500 Rorug04G0302000 Rorug04G0338100 Rorug04G0338200 Rorug04G0413100 Rorug05G0182200 Rorug05G0226500 Rorug05G0273300 Rorug05G0292200 Rorug05G0292200 Rorug05G0392500 Rorug05G0394500 Rorug05G0394600 Rorug05G0505600.1 Rorug06G0351400 Rorug06G0393400 Rorug06G0393600 Rorug06G0470000 Rorug07G0063100 Rorug07G0086800 Rorug07G0109200 Rorug07G0236100
rosa_samantha Rh1AG010800 Rh1AG011100 Rh1AG064900 Rh1AG088000 Rh1AG207100 Rh1AG262000 Rh1AG300800 Rh1BG043000 Rh1BG144600 Rh1BG180700 Rh1BG180800 Rh1BG328800 Rh1BG399400 Rh1CG041400 Rh1CG047300 Rh1CG379700 Rh1DG036500 Rh1DG083000 Rh1DG210700 Rh1DG210800 Rh1DG231100 Rh2AG007900 Rh2AG055500 Rh2AG339100 Rh2AG368100 Rh2BG243300 Rh2BG258900 Rh2BG292000 Rh2BG333500 Rh2BG387300 Rh2BG612800 Rh2BG619100 Rh2CG026500 Rh2CG163600 Rh2CG535700 Rh2DG186400 Rh2DG235000 Rh2DG314500 Rh2DG388500 Rh2DG391400 Rh2DG496900 Rh2DG526700 Rh2DG570700 Rh3AG330700 Rh3BG266900 Rh3CG236000 Rh3CG340400 Rh3DG090000 Rh3DG278400 Rh3DG297600 Rh3DG362600 Rh4AG001300 Rh4AG023300 Rh4AG097100 Rh4AG427000 Rh4BG029400 Rh4BG032400 Rh4BG086000 Rh4BG249200 Rh4CG001900 Rh4CG040600 Rh4CG093000 Rh4CG106300 Rh4CG113200 Rh4CG113900 Rh4DG002300 Rh4DG144400 Rh4DG234200 Rh5AG043700 Rh5AG084900 Rh5AG161500 Rh5AG409000 Rh5AG457200 Rh5AG457900 Rh5AG473700 Rh5AG520600 Rh5BG042100 Rh5BG124100 Rh5BG323500 Rh5BG417200 Rh5BG443700 Rh5BG451500 Rh5BG464900 Rh5BG470400 Rh5BG522500 Rh5CG068800 Rh5CG178300 Rh5CG231000 Rh5CG258600 Rh5CG394500 Rh5CG473700 Rh5DG164700 Rh5DG235400 Rh5DG261300 Rh5DG304900 Rh5DG334500 Rh5DG424300 Rh5DG458400 Rh5DG478600 Rh5DG552300 Rh5DG552700 Rh6AG037000 Rh6AG042100 Rh6AG255500 Rh6AG283400 Rh6AG291800 Rh6BG049600 Rh6BG080700 Rh6BG114600 Rh6BG128900 Rh6BG352500 Rh6CG052400 Rh6CG112900 Rh6CG113000 Rh6CG131300 Rh6CG157700 Rh6CG243200 Rh6CG254100 Rh6CG275700 Rh6CG299700 Rh6CG309100 Rh6CG317600 Rh6CG342600 Rh6CG471900 Rh6DG038200 Rh6DG102300 Rh6DG114400 Rh6DG225900 Rh6DG292900 Rh6DG320700 Rh6DG512800 Rh7AG217700 Rh7AG313900 Rh7AG446000 Rh7AG472600 Rh7BG223100 Rh7BG349900 Rh7BG352000 Rh7CG160200 Rh7CG233900 Rh7CG242700 Rh7CG273900 Rh7CG306400 Rh7CG322200 Rh7DG053800 Rh7DG077800 Rh7DG227700 Rh7DG404800
rosa_wichuraiana Rw0G003990 Rw2G022110 Rw2G024890 Rw6G005700 Rw7G008770

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 440
AciI CCGC 1 cut(s) 181
AclI AACGTT 1 cut(s) 292
AcsI RAATTY 2 cut(s) 43, 583
AdeI CACNNNGTG 1 cut(s) 524
AfaI GTAC 3 cut(s) 69, 81, 392
AfiI CCNNNNNNNGG 1 cut(s) 416
AgsI TTSAA 3 cut(s) 468, 775, 805
AhlI ACTAGT 1 cut(s) 707
AjuI GAANNNNNNNTTGG 2 cut(s) 292, 324
AluBI AGCT 4 cut(s) 193, 197, 860, 866
AluI AGCT 4 cut(s) 193, 197, 860, 866
Alw26I GTCTC 3 cut(s) 345, 447, 452
ApeKI GCWGC 2 cut(s) 101, 197
ApoI RAATTY 2 cut(s) 43, 583
ArsI GACNNNNNNTTYG 4 cut(s) 582, 614, 625, 657
AseI ATTAAT 1 cut(s) 617
Asp700I GAANNNNTTC 1 cut(s) 153
AspS9I GGNCC 1 cut(s) 286
AsuC2I CCSGG 1 cut(s) 522
AsuNHI GCTAGC 1 cut(s) 193
AvaII GGWCC 1 cut(s) 286
BbsI GAAGAC 1 cut(s) 800
BbvI GCAGC 2 cut(s) 88, 184
BclI TGATCA 1 cut(s) 538
BcnI CCSGG 1 cut(s) 522
BcoDI GTCTC 3 cut(s) 345, 447, 452
BcuI ACTAGT 1 cut(s) 707
BfaI CTAG 3 cut(s) 38, 194, 708
BfmI CTRYAG 3 cut(s) 102, 198, 836
BglII AGATCT 1 cut(s) 749
BisI GCNGC 3 cut(s) 102, 182, 198
BlsI GCNGC 3 cut(s) 103, 183, 199
Bme1390I CCNGG 1 cut(s) 522
Bme18I GGWCC 1 cut(s) 286
BmgT120I GGNCC 1 cut(s) 286
BmrFI CCNGG 1 cut(s) 522
BmsI GCATC 6 cut(s) 42, 43, 196, 307, 387, 768
BmtI GCTAGC 1 cut(s) 197
BpiI GAAGAC 1 cut(s) 800
BpuEI CTTGAG 1 cut(s) 846
BpuMI CCSGG 1 cut(s) 522
BsaXI ACNNNNNCTCC 2 cut(s) 342, 372
Bsc4I CCNNNNNNNGG 1 cut(s) 416
Bse3DI GCAATG 3 cut(s) 276, 510, 564
BseGI GGATG 2 cut(s) 211, 286
BseLI CCNNNNNNNGG 1 cut(s) 416
BseMI GCAATG 3 cut(s) 276, 510, 564
BseMII CTCAG 1 cut(s) 488
BseXI GCAGC 2 cut(s) 88, 184
BsiSI CCGG 1 cut(s) 521
BslI CCNNNNNNNGG 1 cut(s) 416
BsmAI GTCTC 3 cut(s) 345, 447, 452
BsmBI CGTCTC 2 cut(s) 345, 447
Bsp1407I TGTACA 1 cut(s) 67
Bsp143I GATC 4 cut(s) 25, 56, 538, 749
BspACI CCGC 1 cut(s) 181
BspCNI CTCAG 1 cut(s) 489
BspMAI CTGCAG 2 cut(s) 106, 202
BspOI GCTAGC 1 cut(s) 197
BsrDI GCAATG 3 cut(s) 276, 510, 564
BsrGI TGTACA 1 cut(s) 67
BssMI GATC 4 cut(s) 25, 56, 538, 749
Bst4CI ACNGT 1 cut(s) 19
Bst6I CTCTTC 2 cut(s) 240, 708
BstAPI GCANNNNNTGC 1 cut(s) 206
BstAUI TGTACA 1 cut(s) 67
BstC8I GCNNGC 1 cut(s) 195
BstDEI CTNAG 2 cut(s) 158, 497
BstF5I GGATG 2 cut(s) 211, 286
BstKTI GATC 4 cut(s) 28, 59, 541, 752
BstMAI GTCTC 3 cut(s) 345, 447, 452
BstMBI GATC 4 cut(s) 25, 56, 538, 749
BstMWI GCNNNNNNNGC 5 cut(s) 61, 107, 190, 206, 493
BstNSI RCATGY 1 cut(s) 241
BstSCI CCNGG 1 cut(s) 520
BstSFI CTRYAG 3 cut(s) 102, 198, 836
BstV1I GCAGC 2 cut(s) 88, 184
BstV2I GAAGAC 1 cut(s) 800
BstX2I RGATCY 1 cut(s) 749
BstYI RGATCY 1 cut(s) 749
BtgZI GCGATG 1 cut(s) 578
BtsCI GGATG 2 cut(s) 211, 286
BtsI GCAGTG 1 cut(s) 111
BtsIMutI CAGTG 1 cut(s) 111
Cac8I GCNNGC 1 cut(s) 195
Cfr13I GGNCC 1 cut(s) 286
Csp6I GTAC 3 cut(s) 68, 80, 391
CviAII CATG 5 cut(s) 119, 238, 492, 553, 702
CviJI RGCY 9 cut(s) 110, 193, 197, 496, 551, 563, 833, 860, 866
CviKI_1 RGCY 9 cut(s) 110, 193, 197, 496, 551, 563, 833, 860, 866
CviQI GTAC 3 cut(s) 68, 80, 391
DdeI CTNAG 2 cut(s) 158, 497
DpnI GATC 4 cut(s) 27, 58, 540, 751
DpnII GATC 4 cut(s) 25, 56, 538, 749
DraIII CACNNNGTG 1 cut(s) 524
Eam1104I CTCTTC 2 cut(s) 240, 708
EarI CTCTTC 2 cut(s) 240, 708
Eco32I GATATC 1 cut(s) 128
Eco47I GGWCC 1 cut(s) 286
EcoRI GAATTC 1 cut(s) 43
EcoRV GATATC 1 cut(s) 128
EcoT22I ATGCAT 1 cut(s) 692
Esp3I CGTCTC 2 cut(s) 345, 447
FaeI CATG 5 cut(s) 122, 241, 495, 556, 705
FatI CATG 5 cut(s) 118, 237, 491, 552, 701
FbaI TGATCA 1 cut(s) 538
FblI GTMKAC 1 cut(s) 440
Fnu4HI GCNGC 3 cut(s) 102, 182, 198
FokI GGATG 2 cut(s) 218, 293
Fsp4HI GCNGC 3 cut(s) 102, 182, 198
FspBI CTAG 3 cut(s) 38, 194, 708
GluI GCNGC 3 cut(s) 102, 182, 198
HapII CCGG 1 cut(s) 521
Hin1II CATG 5 cut(s) 122, 241, 495, 556, 705
HinfI GANTC 1 cut(s) 250
HpaII CCGG 1 cut(s) 521
Hpy166II GTNNAC 2 cut(s) 424, 441
Hpy188I TCNGA 2 cut(s) 754, 875
Hpy188III TCNNGA 4 cut(s) 38, 329, 542, 588
Hpy8I GTNNAC 2 cut(s) 424, 441
Hpy99I CGWCG 1 cut(s) 26
HpyCH4III ACNGT 1 cut(s) 19
HpyCH4IV ACGT 2 cut(s) 292, 354
HpyCH4V TGCA 9 cut(s) 104, 200, 235, 241, 269, 320, 487, 569, 690
HpyF10VI GCNNNNNNNGC 5 cut(s) 61, 107, 190, 206, 493
HpyF3I CTNAG 2 cut(s) 158, 497
HpySE526I ACGT 2 cut(s) 292, 354
Hsp92II CATG 5 cut(s) 122, 241, 495, 556, 705
Ksp22I TGATCA 1 cut(s) 538
Kzo9I GATC 4 cut(s) 25, 56, 538, 749
LmnI GCTCC 2 cut(s) 190, 412
LpnPI CCDG 3 cut(s) 186, 534, 824
Lsp1109I GCAGC 2 cut(s) 88, 184
LweI GCATC 6 cut(s) 42, 43, 196, 307, 387, 768
MaeI CTAG 3 cut(s) 38, 194, 708
MaeII ACGT 2 cut(s) 292, 354
MalI GATC 4 cut(s) 27, 58, 540, 751
MboI GATC 4 cut(s) 25, 56, 538, 749
MboII GAAGA 6 cut(s) 257, 344, 674, 725, 763, 805
MflI RGATCY 1 cut(s) 749
MluCI AATT 5 cut(s) 43, 256, 583, 697, 763
MmeI TCCRAC 2 cut(s) 55, 796
MnlI CCTC 4 cut(s) 277, 503, 565, 639
Mph1103I ATGCAT 1 cut(s) 692
MroXI GAANNNNTTC 1 cut(s) 153
MseI TTAA 4 cut(s) 11, 482, 533, 617
MspI CCGG 1 cut(s) 521
MspR9I CCNGG 1 cut(s) 522
MwoI GCNNNNNNNGC 5 cut(s) 61, 107, 190, 206, 493
NciI CCSGG 1 cut(s) 522
NdeII GATC 4 cut(s) 25, 56, 538, 749
NheI GCTAGC 1 cut(s) 193
NlaIII CATG 5 cut(s) 122, 241, 495, 556, 705
NsiI ATGCAT 1 cut(s) 692
NspI RCATGY 1 cut(s) 241
PdmI GAANNNNTTC 1 cut(s) 153
PfeI GAWTC 1 cut(s) 250
PkrI GCNGC 3 cut(s) 103, 183, 199
PshBI ATTAAT 1 cut(s) 617
Psp1406I AACGTT 1 cut(s) 292
PspPI GGNCC 1 cut(s) 286
PstI CTGCAG 2 cut(s) 106, 202
PsuI RGATCY 1 cut(s) 749
RsaI GTAC 3 cut(s) 69, 81, 392
RsaNI GTAC 3 cut(s) 68, 80, 391
SaqAI TTAA 4 cut(s) 11, 482, 533, 617
SatI GCNGC 3 cut(s) 102, 182, 198
Sau3AI GATC 4 cut(s) 25, 56, 538, 749
Sau96I GGNCC 1 cut(s) 286
ScrFI CCNGG 1 cut(s) 522
SfaNI GCATC 6 cut(s) 42, 43, 196, 307, 387, 768
SfcI CTRYAG 3 cut(s) 102, 198, 836
SinI GGWCC 1 cut(s) 286
SmlI CTYRAG 1 cut(s) 861
SmoI CTYRAG 1 cut(s) 861
SpeI ACTAGT 1 cut(s) 707
Sse9I AATT 5 cut(s) 43, 256, 583, 697, 763
SsiI CCGC 1 cut(s) 181
SspI AATATT 1 cut(s) 136
SspMI CTAG 3 cut(s) 38, 194, 708
StyD4I CCNGG 1 cut(s) 520
TaaI ACNGT 1 cut(s) 19
TaiI ACGT 2 cut(s) 295, 357
TaqI TCGA 2 cut(s) 24, 589
TasI AATT 5 cut(s) 43, 256, 583, 697, 763
TatI WGTACW 3 cut(s) 67, 79, 390
TauI GCSGC 1 cut(s) 184
TfiI GAWTC 1 cut(s) 250
Tru1I TTAA 4 cut(s) 11, 482, 533, 617
Tru9I TTAA 4 cut(s) 11, 482, 533, 617
TscAI CASTG 1 cut(s) 111
TseI GCWGC 2 cut(s) 101, 197
TspDTI ATGAA 5 cut(s) 36, 569, 635, 675, 690
TspGWI ACGGA 1 cut(s) 399
TspRI CASTG 1 cut(s) 111
VpaK11BI GGWCC 1 cut(s) 286
VspI ATTAAT 1 cut(s) 617
XapI RAATTY 2 cut(s) 43, 583
XbaI TCTAGA 1 cut(s) 37
XceI RCATGY 1 cut(s) 241
XmiI GTMKAC 1 cut(s) 440
XmnI GAANNNNTTC 1 cut(s) 153
XspI CTAG 3 cut(s) 38, 194, 708
Zsp2I ATGCAT 1 cut(s) 692
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.