RLG00000020263

Belongs to the 'GDSL' lipolytic enzyme family

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
Physical Location & Seq
Reverse (-)
63005952 .. 63016597
10646 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000020263

Sequence Viewer

Length: 1608 bp
ATGTCTTCGAGGTCAGGATTCAGATTAGGAGCGGCTCCGGCAGGTCTGCAGTCGGATCGAGCTGTTTTCCTTCATCATGGATGGAAGCAGGCATGGCAGAACTATCTTCTGTCTGATCATCAGACGGGTTGGTGGCGCCGTCTTATTGAGATGGCGACGGGGAGAAATGACGCCGGCTTAGTTCTTGCTTGGCCATTTGCGTGCTCTAAGGTCTGTTACTTGGTCCTACGTCACCTACTTGATGGGTGGAGCAGGCACAGCTACGGCATAAAGGACAGATTTGCCATCGATTGGTGCGTCAGTGACTATAATGTCCTCGGGCTTTTCCGGGCTCCGAACCCGATGCAGCTGCCTGGGTCTCGGGGTTTGCGGGTCGGGTGGCGATTCAGTTGGGGTATCGGTGGAGCAGAAGAGTCGGAGGAGGGTGAGGGATTGAGGGCCATTGGGAGGAGTGTGGACTATGAGAAGCTTCCAGATATATGTCCTCACTGTGGCAATGTCGGGCACCTCGTCACAGCTTGTAAGTATGTGCAACAGTCCTCTGGCCCGGTCTCAATGGACAAGGAGATTGAGAAGGGAAGGGGTCGATCCCGCAAGCGTAGTGGGTGCTCTCATAGGCATCGTGCTCGTCAACAACATGTCTCCAAAGTGTACGTGCCTAAAAACCAACTGGATTCGGTGAAACGAGGTAAGGCTATGATAGTTGATTCAACTCCAAGAACCAGGGAGGATTGTGGCGAGGGTTCTTCTTTTGTGCGAAAGTACCCGACTCCAGTAGATATGGGTGTAATCCCAACTAGTGTTGTGCCGGAGCCCCAAGTGGTGGTTGAACATGTGGTCCAGGAAGTTATTGAGCCGGTGGCTAAGGTGGTTTTGGAACCAGAAACTAATCAAGATCAAGGCATCCATGACAATGTTGTTGAGCAGGAGGATGATACTAGGTATGTCAGAGATCATGGCCAACAGAATAATGATGATGATGATGCATCTACATGTGGTGGCAGTGAGCAGGTTTGTTCTGACGCTGGGGACACTGTCGTTGCAAATTCAGTATCTCCAATTGCTAGTTGGTATAAGGAGACAGAACAAGTTGATATGGATGGGGCTTTTACTAAAATCTACAAGAAAGGAGGAAGAAAATGTGGGATTACAAGCCTTGCACCTCTTGGTTGTGTACCATCTGCGAGGGCAACTACACCAGGAAACACAGGCACCTGTGTGGAAGAAATGAATGCGCTAGCGGTACTACACAACGCAGAACTTTCTGAAGCCCTTTTAAAGAGGAAAGGAAAGCTCCAAGGATTCAAATATTCAAATCCAGATTTCTACAGTTACTTAAATGGAATATTTAACAATTCTACAAATTTTGGTTTCCAGGAGGGAAAGACAGCATGTTGTGGCTGTGGTACATATAGAGGAATTTTGAGCTTTGGAGGAAAGAGAGGCATGACAGATTACGAATTATGTGACAATGTTACAGAGTATGTCTTTTTTGACTCTGTGCATATAACAGAAAGGGTTTACGAGAAAGTTTCCGAATTATGGTGGAGCCATACTCCCAATGTCACAGGGTCCTACAATAATCTGAAACAGCTTTTTGAAGTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

536

Amino Acids

59.44

Weight (kDa)

6.61

Isoelectric Point (pI)

40.58

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lipase_GDSL PF00657 373 - 514 3.5e-07 GDSL-like Lipase/Acylhydrolase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000044)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G07760 AT5G28823
fragaria_vesca FvH4_1g13572 FvH4_2g03281 FvH4_2g04691 FvH4_2g08332 FvH4_2g08333 FvH4_2g15313 FvH4_2g26101 FvH4_2g29541 FvH4_3g06911 FvH4_3g34351 FvH4_3g43733 FvH4_4g02432 FvH4_4g05601 FvH4_4g08213 FvH4_4g09961 FvH4_4g10131 FvH4_4g20001 FvH4_4g20002 FvH4_5g01051 FvH4_5g01401 FvH4_5g27943 FvH4_6g09220 FvH4_6g17383 FvH4_6g35491 FvH4_6g46421 FvH4_7g04151 FvH4_7g13962 FvH4_7g18611 FvH4_7g19491 FvH4_7g19511 FvH4_7g26562
malus_domestica MD06G1221600.v1.1
pyrus_communis pycom10g21150
rosa_chinensis RchiOBHm_Chr1g0337571 RchiOBHm_Chr2g0168771 RchiOBHm_Chr3g0453631 RchiOBHm_Chr6g0278581
rosa_laevigata RLG00000001899 RLG00000001925 RLG00000002026 RLG00000003410 RLG00000003767 RLG00000004304 RLG00000004473 RLG00000004677 RLG00000006856 RLG00000007994 RLG00000009888 RLG00000011627 RLG00000012174 RLG00000012217 RLG00000013118 RLG00000013736 RLG00000014194 RLG00000014251 RLG00000015011 RLG00000015057 RLG00000015235 RLG00000017416 RLG00000018052 RLG00000018537 RLG00000019968 RLG00000020096 RLG00000020263 RLG00000022606 RLG00000023119 RLG00000028111 RLG00000029686 RLG00000030126 RLG00000031124 RLG00000031236 RLG00000032766 RLG00000033171 RLG00000033548 RLG00000033987 RLG00000034062 RLG00000035115 RLG00000035863
rosa_multiflora Rmu_co8036712.1_g000001 Rmu_co8080248.1_g000001 Rmu_co8208334.1_g000001 Rmu_co8253451.1_g000001 Rmu_co8393241.1_g000001 Rmu_co8522225.1_g000005 Rmu_sc0000060.1_g000030 Rmu_sc0000060.1_g000031 Rmu_sc0000060.1_g000032 Rmu_sc0000090.1_g000008 Rmu_sc0000149.1_g000051 Rmu_sc0000149.1_g000058 Rmu_sc0000309.1_g000050 Rmu_sc0000370.1_g000022 Rmu_sc0000370.1_g000023 Rmu_sc0000370.1_g000024 Rmu_sc0000418.1_g000018 Rmu_sc0000427.1_g000014 Rmu_sc0000427.1_g000015 Rmu_sc0000434.1_g000008 Rmu_sc0000487.1_g000038 Rmu_sc0000487.1_g000039 Rmu_sc0000569.1_g000029 Rmu_sc0000580.1_g000097 Rmu_sc0000595.1_g000068 Rmu_sc0000607.1_g000027 Rmu_sc0000738.1_g000004 Rmu_sc0000758.1_g000001 Rmu_sc0000758.1_g000002 Rmu_sc0000870.1_g000019 Rmu_sc0000924.1_g000040 Rmu_sc0000924.1_g000041 Rmu_sc0000999.1_g000037 Rmu_sc0001001.1_g000001 Rmu_sc0001010.1_g000080 Rmu_sc0001075.1_g000041 Rmu_sc0001097.1_g000016 Rmu_sc0001173.1_g000020 Rmu_sc0001258.1_g000010 Rmu_sc0001425.1_g000031 Rmu_sc0001493.1_g000020 Rmu_sc0001493.1_g000021 Rmu_sc0001644.1_g000024 Rmu_sc0001648.1_g000039 Rmu_sc0001662.1_g000002 Rmu_sc0001849.1_g000046 Rmu_sc0001851.1_g000038 Rmu_sc0001861.1_g000006 Rmu_sc0001899.1_g000008 Rmu_sc0002231.1_g000023 Rmu_sc0002393.1_g000012 Rmu_sc0002515.1_g000010 Rmu_sc0002551.1_g000013 Rmu_sc0002680.1_g000029 Rmu_sc0002700.1_g000030 Rmu_sc0002700.1_g000031 Rmu_sc0002709.1_g000035 Rmu_sc0002779.1_g000017 Rmu_sc0003267.1_g000040 Rmu_sc0003306.1_g000009 Rmu_sc0003338.1_g000014 Rmu_sc0003522.1_g000038 Rmu_sc0003522.1_g000039 Rmu_sc0003653.1_g000031 Rmu_sc0003901.1_g000003 Rmu_sc0003920.1_g000009 Rmu_sc0004014.1_g000009 Rmu_sc0004016.1_g000013 Rmu_sc0004031.1_g000002 Rmu_sc0004106.1_g000001 Rmu_sc0004432.1_g000004 Rmu_sc0004481.1_g000020 Rmu_sc0004874.1_g000005 Rmu_sc0004928.1_g000005 Rmu_sc0005065.1_g000053 Rmu_sc0005091.1_g000005 Rmu_sc0005217.1_g000015 Rmu_sc0005242.1_g000002 Rmu_sc0005300.1_g000011 Rmu_sc0005400.1_g000004 Rmu_sc0005486.1_g000007 Rmu_sc0005527.1_g000015 Rmu_sc0006059.1_g000021 Rmu_sc0006087.1_g000004 Rmu_sc0006184.1_g000006 Rmu_sc0006184.1_g000007 Rmu_sc0006578.1_g000006 Rmu_sc0006730.1_g000010 Rmu_sc0006736.1_g000030 Rmu_sc0006736.1_g000033 Rmu_sc0007333.1_g000018 Rmu_sc0007856.1_g000010 Rmu_sc0008231.1_g000003 Rmu_sc0009862.1_g000012 Rmu_sc0010547.1_g000001 Rmu_sc0010547.1_g000003 Rmu_sc0010632.1_g000012 Rmu_sc0010747.1_g000008 Rmu_sc0011075.1_g000009 Rmu_sc0011565.1_g000004 Rmu_sc0011641.1_g000003 Rmu_sc0013102.1_g000013 Rmu_sc0013160.1_g000006 Rmu_sc0014846.1_g000004 Rmu_sc0017037.1_g000003 Rmu_sc0018203.1_g000001 Rmu_sc0018204.1_g000001 Rmu_sc0018348.1_g000001 Rmu_sc0019354.1_g000002 Rmu_sc0021630.1_g000002 Rmu_sc0022987.1_g000002 Rmu_sc0024469.1_g000005 Rmu_sc0033519.1_g000001 Rmu_sc0033519.1_g000002 Rmu_sc0033519.1_g000003 Rmu_sc0042775.1_g000001 Rmu_ssc0000110.1_g000003 Rmu_ssc0000110.1_g000004 Rmu_ssc0000126.1_g000068 Rmu_ssc0000200.1_g000007 Rmu_ssc0000295.1_g000003 Rmu_ssc0000295.1_g000004 Rmu_ssc0000299.1_g000010 Rmu_ssc0000308.1_g000024 Rmu_ssc0000339.1_g000006 Rmu_ssc0000385.1_g000012 Rmu_ssc0000409.1_g000004 Rmu_ssc0000421.1_g000004
rosa_roxburghii Rroxscaffold_156G00440360 Rroxscaffold_166G00440800 Rroxscaffold_1G00039040 Rroxscaffold_1G00039050 Rroxscaffold_1G00073950 Rroxscaffold_2G00091710 Rroxscaffold_2G00120050 Rroxscaffold_2G00122590 Rroxscaffold_3G00219700 Rroxscaffold_3G00264140 Rroxscaffold_4G00290600 Rroxscaffold_4G00323610 Rroxscaffold_4G00328460 Rroxscaffold_5G00343440 Rroxscaffold_5G00343570 Rroxscaffold_5G00378540 Rroxscaffold_5G00385090 Rroxscaffold_7G00169130 Rroxscaffold_7G00216420
rosa_rugosa Rorug01G0065800 Rorug01G0073500 Rorug01G0091700 Rorug01G0096500 Rorug01G0204700.1 Rorug01G0249100 Rorug01G0333800 Rorug01G0333900 Rorug01G0339500 Rorug01G0431300 Rorug02G0085400 Rorug02G0117500 Rorug02G0130900 Rorug02G0178800 Rorug02G0226700 Rorug02G0336300 Rorug02G0338700 Rorug02G0351400 Rorug02G0459900 Rorug03G0187000 Rorug03G0223700 Rorug03G0291300 Rorug03G0291300 Rorug03G0311100 Rorug03G0316900 Rorug03G0346000 Rorug04G0014500 Rorug04G0014600 Rorug04G0124100 Rorug04G0136500 Rorug04G0302000 Rorug04G0338100 Rorug04G0338200 Rorug04G0413100 Rorug05G0182200 Rorug05G0226500 Rorug05G0273300 Rorug05G0292200 Rorug05G0292200 Rorug05G0392500 Rorug05G0394500 Rorug05G0394600 Rorug05G0505600.1 Rorug06G0351400 Rorug06G0393400 Rorug06G0393600 Rorug06G0470000 Rorug07G0063100 Rorug07G0086800 Rorug07G0109200 Rorug07G0236100
rosa_samantha Rh1AG010800 Rh1AG011100 Rh1AG064900 Rh1AG088000 Rh1AG207100 Rh1AG262000 Rh1AG300800 Rh1BG043000 Rh1BG144600 Rh1BG180700 Rh1BG180800 Rh1BG328800 Rh1BG399400 Rh1CG041400 Rh1CG047300 Rh1CG379700 Rh1DG036500 Rh1DG083000 Rh1DG210700 Rh1DG210800 Rh1DG231100 Rh2AG007900 Rh2AG055500 Rh2AG339100 Rh2AG368100 Rh2BG243300 Rh2BG258900 Rh2BG292000 Rh2BG333500 Rh2BG387300 Rh2BG612800 Rh2BG619100 Rh2CG026500 Rh2CG163600 Rh2CG535700 Rh2DG186400 Rh2DG235000 Rh2DG314500 Rh2DG388500 Rh2DG391400 Rh2DG496900 Rh2DG526700 Rh2DG570700 Rh3AG330700 Rh3BG266900 Rh3CG236000 Rh3CG340400 Rh3DG090000 Rh3DG278400 Rh3DG297600 Rh3DG362600 Rh4AG001300 Rh4AG023300 Rh4AG097100 Rh4AG427000 Rh4BG029400 Rh4BG032400 Rh4BG086000 Rh4BG249200 Rh4CG001900 Rh4CG040600 Rh4CG093000 Rh4CG106300 Rh4CG113200 Rh4CG113900 Rh4DG002300 Rh4DG144400 Rh4DG234200 Rh5AG043700 Rh5AG084900 Rh5AG161500 Rh5AG409000 Rh5AG457200 Rh5AG457900 Rh5AG473700 Rh5AG520600 Rh5BG042100 Rh5BG124100 Rh5BG323500 Rh5BG417200 Rh5BG443700 Rh5BG451500 Rh5BG464900 Rh5BG470400 Rh5BG522500 Rh5CG068800 Rh5CG178300 Rh5CG231000 Rh5CG258600 Rh5CG394500 Rh5CG473700 Rh5DG164700 Rh5DG235400 Rh5DG261300 Rh5DG304900 Rh5DG334500 Rh5DG424300 Rh5DG458400 Rh5DG478600 Rh5DG552300 Rh5DG552700 Rh6AG037000 Rh6AG042100 Rh6AG255500 Rh6AG283400 Rh6AG291800 Rh6BG049600 Rh6BG080700 Rh6BG114600 Rh6BG128900 Rh6BG352500 Rh6CG052400 Rh6CG112900 Rh6CG113000 Rh6CG131300 Rh6CG157700 Rh6CG243200 Rh6CG254100 Rh6CG275700 Rh6CG299700 Rh6CG309100 Rh6CG317600 Rh6CG342600 Rh6CG471900 Rh6DG038200 Rh6DG102300 Rh6DG114400 Rh6DG225900 Rh6DG292900 Rh6DG320700 Rh6DG512800 Rh7AG217700 Rh7AG313900 Rh7AG446000 Rh7AG472600 Rh7BG223100 Rh7BG349900 Rh7BG352000 Rh7CG160200 Rh7CG233900 Rh7CG242700 Rh7CG273900 Rh7CG306400 Rh7CG322200 Rh7DG053800 Rh7DG077800 Rh7DG227700 Rh7DG404800
rosa_wichuraiana Rw0G003990 Rw2G022110 Rw2G024890 Rw6G005700 Rw7G008770

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 311
Acc36I ACCTGC 2 cut(s) 32, 1000
AccB1I GGYRCC 3 cut(s) 135, 504, 1211
AccB7I CCANNNNNTGG 2 cut(s) 291, 823
AccBSI CCGCTC 1 cut(s) 32
AciI CCGC 4 cut(s) 32, 370, 592, 1241
AclWI GGATC 2 cut(s) 63, 582
AcoI YGGCCR 2 cut(s) 191, 958
AcsI RAATTY 3 cut(s) 1045, 1363, 1419
AcuI CTGAAG 1 cut(s) 1287
AcyI GRCGYC 2 cut(s) 136, 171
AfaI GTAC 5 cut(s) 653, 764, 1176, 1245, 1408
AfiI CCNNNNNNNGG 5 cut(s) 291, 447, 491, 823, 1542
AflIII ACRYGT 3 cut(s) 637, 832, 992
AgsI TTSAA 5 cut(s) 711, 830, 1306, 1314, 1601
AhlI ACTAGT 1 cut(s) 797
AjnI CCWGG 5 cut(s) 352, 722, 840, 1198, 1374
AleI CACNNNNGTG 1 cut(s) 1217
AloI GAACNNNNNNTCC 2 cut(s) 822, 854
AluBI AGCT 8 cut(s) 62, 261, 349, 469, 518, 1294, 1428, 1594
AluI AGCT 8 cut(s) 62, 261, 349, 469, 518, 1294, 1428, 1594
Alw21I GWGCWC 3 cut(s) 206, 611, 628
Alw26I GTCTC 4 cut(s) 363, 556, 646, 1073
AlwI GGATC 2 cut(s) 63, 582
Ama87I CYCGRG 2 cut(s) 317, 360
AoxI GGCC 4 cut(s) 191, 438, 544, 958
ApeKI GCWGC 2 cut(s) 346, 349
ApoI RAATTY 3 cut(s) 1045, 1363, 1419
AspLEI GCGC 2 cut(s) 138, 1237
AspS9I GGNCC 5 cut(s) 223, 438, 545, 838, 1572
AsuC2I CCSGG 2 cut(s) 329, 548
AsuHPI GGTGA 3 cut(s) 224, 437, 691
AsuNHI GCTAGC 1 cut(s) 1237
AvaI CYCGRG 2 cut(s) 317, 360
AvaII GGWCC 3 cut(s) 223, 838, 1572
BaeGI GKGCMC 1 cut(s) 507
BalI TGGCCA 2 cut(s) 193, 960
BanI GGYRCC 3 cut(s) 135, 504, 1211
BanII GRGCYC 2 cut(s) 334, 816
Bbv12I GWGCWC 3 cut(s) 206, 611, 628
BbvI GCAGC 2 cut(s) 336, 358
BccI CCATC 6 cut(s) 75, 145, 236, 293, 1094, 1186
BceAI ACGGC 2 cut(s) 123, 280
BciT130I CCWGG 5 cut(s) 354, 724, 842, 1200, 1376
BclI TGATCA 1 cut(s) 115
BcnI CCSGG 2 cut(s) 329, 548
BcoDI GTCTC 4 cut(s) 363, 556, 646, 1073
BcuI ACTAGT 1 cut(s) 797
BfaI CTAG 4 cut(s) 798, 939, 1065, 1238
BfmI CTRYAG 2 cut(s) 47, 1327
BfoI RGCGCY 1 cut(s) 139
BfuAI ACCTGC 2 cut(s) 32, 1000
BisI GCNGC 3 cut(s) 33, 347, 350
BlsI GCNGC 3 cut(s) 34, 348, 351
Bme1390I CCNGG 7 cut(s) 329, 354, 548, 724, 842, 1200, 1376
Bme18I GGWCC 3 cut(s) 223, 838, 1572
BmeT110I CYCGRG 2 cut(s) 317, 360
BmgT120I GGNCC 5 cut(s) 223, 438, 545, 838, 1572
BmiI GGNNCC 9 cut(s) 36, 137, 333, 506, 813, 879, 1213, 1550, 1573
BmrFI CCNGG 7 cut(s) 329, 354, 548, 724, 842, 1200, 1376
BmsI GCATC 5 cut(s) 333, 628, 912, 973, 995
BmtI GCTAGC 1 cut(s) 1241
BplI GAGNNNNNCTC 2 cut(s) 1540, 1572
BpmI CTGGAG 1 cut(s) 756
Bpu10I CCTNAGC 1 cut(s) 864
BpuMI CCSGG 2 cut(s) 329, 548
Bsa29I ATCGAT 1 cut(s) 288
BsaAI YACGTR 1 cut(s) 655
BsaHI GRCGYC 2 cut(s) 136, 171
BsaI GGTCTC 2 cut(s) 363, 556
BsaJI CCNNGG 4 cut(s) 316, 353, 723, 1297
Bsc4I CCNNNNNNNGG 5 cut(s) 291, 447, 491, 823, 1542
Bse118I RCCGGY 2 cut(s) 173, 856
Bse1I ACTGG 2 cut(s) 675, 773
Bse3DI GCAATG 1 cut(s) 502
BseBI CCWGG 5 cut(s) 354, 724, 842, 1200, 1376
BseCI ATCGAT 1 cut(s) 288
BseDI CCNNGG 4 cut(s) 316, 353, 723, 1297
BseGI GGATG 4 cut(s) 86, 903, 937, 1105
BseLI CCNNNNNNNGG 5 cut(s) 291, 447, 491, 823, 1542
BseMI GCAATG 1 cut(s) 502
BseNI ACTGG 2 cut(s) 675, 773
BseRI GAGGAG 2 cut(s) 434, 463
BseSI GKGCMC 1 cut(s) 507
BseXI GCAGC 2 cut(s) 336, 358
BseYI CCCAGC 1 cut(s) 1025
BshFI GGCC 4 cut(s) 193, 440, 546, 960
BshNI GGYRCC 3 cut(s) 135, 504, 1211
BshVI ATCGAT 1 cut(s) 288
BsiHKAI GWGCWC 3 cut(s) 206, 611, 628
BsiHKCI CYCGRG 2 cut(s) 317, 360
BsiSI CCGG 6 cut(s) 38, 174, 328, 548, 809, 857
BslFI GGGAC 1 cut(s) 1043
BslI CCNNNNNNNGG 5 cut(s) 291, 447, 491, 823, 1542
BsmAI GTCTC 4 cut(s) 363, 556, 646, 1073
BsmFI GGGAC 1 cut(s) 1043
BsmI GAATGC 1 cut(s) 1237
BsnI GGCC 4 cut(s) 193, 440, 546, 960
Bso31I GGTCTC 2 cut(s) 363, 556
BsoBI CYCGRG 2 cut(s) 317, 360
Bsp1286I GDGCHC 6 cut(s) 206, 334, 507, 611, 628, 816
Bsp143I GATC 5 cut(s) 55, 115, 587, 895, 952
BspACI CCGC 4 cut(s) 32, 370, 592, 1241
BspANI GGCC 4 cut(s) 193, 440, 546, 960
BspDI ATCGAT 1 cut(s) 288
BspLI GGNNCC 9 cut(s) 36, 137, 333, 506, 813, 879, 1213, 1550, 1573
BspMAI CTGCAG 1 cut(s) 51
BspMI ACCTGC 2 cut(s) 32, 1000
BspOI GCTAGC 1 cut(s) 1241
BspPI GGATC 2 cut(s) 63, 582
BspT107I GGYRCC 3 cut(s) 135, 504, 1211
BspTNI GGTCTC 2 cut(s) 363, 556
BsrBI CCGCTC 1 cut(s) 32
BsrDI GCAATG 1 cut(s) 502
BsrFI RCCGGY 2 cut(s) 173, 856
BsrI ACTGG 2 cut(s) 675, 773
BssAI RCCGGY 2 cut(s) 173, 856
BssECI CCNNGG 4 cut(s) 316, 353, 723, 1297
BssMI GATC 5 cut(s) 55, 115, 587, 895, 952
BssNI GRCGYC 2 cut(s) 136, 171
BssT1I CCWWGG 1 cut(s) 1297
Bst2UI CCWGG 5 cut(s) 354, 724, 842, 1200, 1376
Bst4CI ACNGT 4 cut(s) 491, 537, 1036, 1331
Bst6I CTCTTC 1 cut(s) 405
BstACI GRCGYC 2 cut(s) 136, 171
BstBAI YACGTR 1 cut(s) 655
BstC8I GCNNGC 6 cut(s) 90, 175, 202, 254, 596, 1239
BstDEI CTNAG 3 cut(s) 178, 207, 864
BstF5I GGATG 4 cut(s) 86, 903, 937, 1105
BstH2I RGCGCY 1 cut(s) 139
BstHHI GCGC 2 cut(s) 138, 1237
BstKTI GATC 5 cut(s) 58, 118, 590, 898, 955
BstMAI GTCTC 4 cut(s) 363, 556, 646, 1073
BstMBI GATC 5 cut(s) 55, 115, 587, 895, 952
BstMWI GCNNNNNNNGC 3 cut(s) 38, 94, 258
BstNI CCWGG 5 cut(s) 354, 724, 842, 1200, 1376
BstNSI RCATGY 4 cut(s) 641, 836, 996, 1395
BstSCI CCNGG 7 cut(s) 327, 352, 546, 722, 840, 1198, 1374
BstSFI CTRYAG 2 cut(s) 47, 1327
BstSLI GKGCMC 1 cut(s) 507
BstV1I GCAGC 2 cut(s) 336, 358
Bsu15I ATCGAT 1 cut(s) 288
BsuRI GGCC 4 cut(s) 193, 440, 546, 960
BsuTUI ATCGAT 1 cut(s) 288
BtsCI GGATG 4 cut(s) 86, 903, 937, 1105
BtsI GCAGTG 1 cut(s) 1009
BtsIMutI CAGTG 4 cut(s) 307, 487, 1009, 1032
BveI ACCTGC 2 cut(s) 32, 1000
Cac8I GCNNGC 6 cut(s) 90, 175, 202, 254, 596, 1239
CfoI GCGC 2 cut(s) 138, 1237
Cfr10I RCCGGY 2 cut(s) 173, 856
Cfr13I GGNCC 5 cut(s) 223, 438, 545, 838, 1572
ClaI ATCGAT 1 cut(s) 288
CseI GACGC 3 cut(s) 179, 286, 1031
Csp6I GTAC 5 cut(s) 652, 763, 1175, 1244, 1407
CspCI CAANNNNNGTGG 2 cut(s) 583, 618
CviAII CATG 9 cut(s) 77, 93, 638, 833, 908, 956, 993, 1392, 1447
CviQI GTAC 5 cut(s) 652, 763, 1175, 1244, 1407
DdeI CTNAG 3 cut(s) 178, 207, 864
DinI GGCGCC 1 cut(s) 137
DpnI GATC 5 cut(s) 57, 117, 589, 897, 954
DpnII GATC 5 cut(s) 55, 115, 587, 895, 952
DraI TTTAAA 1 cut(s) 1278
DrdI GACNNNNNNGTC 1 cut(s) 311
DseDI GACNNNNNNGTC 1 cut(s) 311
EaeI YGGCCR 2 cut(s) 191, 958
Eam1104I CTCTTC 1 cut(s) 405
EarI CTCTTC 1 cut(s) 405
Eco130I CCWWGG 1 cut(s) 1297
Eco24I GRGCYC 2 cut(s) 334, 816
Eco31I GGTCTC 2 cut(s) 363, 556
Eco47I GGWCC 3 cut(s) 223, 838, 1572
Eco57I CTGAAG 1 cut(s) 1287
Eco88I CYCGRG 2 cut(s) 317, 360
EcoO109I RGGNCCY 1 cut(s) 1572
EcoRII CCWGG 5 cut(s) 352, 722, 840, 1198, 1374
EcoT14I CCWWGG 1 cut(s) 1297
EcoT22I ATGCAT 1 cut(s) 988
EcoT38I GRGCYC 2 cut(s) 334, 816
EgeI GGCGCC 1 cut(s) 137
EheI GGCGCC 1 cut(s) 137
ErhI CCWWGG 1 cut(s) 1297
FaeI CATG 9 cut(s) 80, 96, 641, 836, 911, 959, 996, 1395, 1450
FaqI GGGAC 1 cut(s) 1043
FatI CATG 9 cut(s) 76, 92, 637, 832, 907, 955, 992, 1391, 1446
FauI CCCGC 2 cut(s) 363, 599
FbaI TGATCA 1 cut(s) 115
Fnu4HI GCNGC 3 cut(s) 33, 347, 350
FokI GGATG 4 cut(s) 93, 890, 944, 1112
FriOI GRGCYC 2 cut(s) 334, 816
Fsp4HI GCNGC 3 cut(s) 33, 347, 350
FspBI CTAG 4 cut(s) 798, 939, 1065, 1238
GlaI GCGC 2 cut(s) 137, 1236
GluI GCNGC 3 cut(s) 33, 347, 350
GsaI CCCAGC 1 cut(s) 1029
GsuI CTGGAG 1 cut(s) 756
HaeII RGCGCY 1 cut(s) 139
HaeIII GGCC 4 cut(s) 193, 440, 546, 960
HapII CCGG 6 cut(s) 38, 174, 328, 548, 809, 857
HgaI GACGC 3 cut(s) 179, 286, 1031
HhaI GCGC 2 cut(s) 138, 1237
Hin1I GRCGYC 2 cut(s) 136, 171
Hin1II CATG 9 cut(s) 80, 96, 641, 836, 911, 959, 996, 1395, 1450
Hin6I GCGC 2 cut(s) 136, 1235
HinP1I GCGC 2 cut(s) 136, 1235
HincII GTYRAC 1 cut(s) 632
HindII GTYRAC 1 cut(s) 632
HindIII AAGCTT 1 cut(s) 467
HinfI GANTC 8 cut(s) 18, 384, 413, 674, 707, 769, 1302, 1496
HpaII CCGG 6 cut(s) 38, 174, 328, 548, 809, 857
HphI GGTGA 3 cut(s) 224, 437, 691
Hpy166II GTNNAC 5 cut(s) 457, 632, 652, 1175, 1522
Hpy188III TCNNGA 4 cut(s) 15, 473, 893, 1319
Hpy8I GTNNAC 5 cut(s) 457, 632, 652, 1175, 1522
Hpy99I CGWCG 1 cut(s) 160
HpyAV CCTTC 3 cut(s) 80, 568, 573
HpyCH4III ACNGT 4 cut(s) 491, 537, 1036, 1331
HpyCH4IV ACGT 2 cut(s) 229, 654
HpyCH4V TGCA 7 cut(s) 49, 346, 532, 986, 1043, 1160, 1504
HpyF10VI GCNNNNNNNGC 3 cut(s) 38, 94, 258
HpyF3I CTNAG 3 cut(s) 178, 207, 864
HpySE526I ACGT 2 cut(s) 229, 654
Hsp92I GRCGYC 2 cut(s) 136, 171
Hsp92II CATG 9 cut(s) 80, 96, 641, 836, 911, 959, 996, 1395, 1450
HspAI GCGC 2 cut(s) 136, 1235
KasI GGCGCC 1 cut(s) 135
KroI GCCGGC 1 cut(s) 173
KroNI GCCGGC 1 cut(s) 175
Ksp22I TGATCA 1 cut(s) 115
Kzo9I GATC 5 cut(s) 55, 115, 587, 895, 952
LmnI GCTCC 8 cut(s) 29, 40, 249, 337, 404, 811, 1299, 1548
Lsp1109I GCAGC 2 cut(s) 336, 358
LweI GCATC 5 cut(s) 333, 628, 912, 973, 995
MaeI CTAG 4 cut(s) 798, 939, 1065, 1238
MaeII ACGT 2 cut(s) 229, 654
MaeIII GTNAC 8 cut(s) 215, 230, 302, 511, 1331, 1466, 1474, 1564
MalI GATC 5 cut(s) 57, 117, 589, 897, 954
MbiI CCGCTC 1 cut(s) 32
MboI GATC 5 cut(s) 55, 115, 587, 895, 952
MboII GAAGA 5 cut(s) 98, 422, 738, 1146, 1235
MfeI CAATTG 1 cut(s) 1059
MhlI GDGCHC 6 cut(s) 206, 334, 507, 611, 628, 816
MlsI TGGCCA 2 cut(s) 193, 960
MluCI AATT 7 cut(s) 1045, 1059, 1354, 1363, 1419, 1460, 1538
MluNI TGGCCA 2 cut(s) 193, 960
Mly113I GGCGCC 1 cut(s) 136
MlyI GAGTC 3 cut(s) 422, 763, 1490
MmeI TCCRAC 2 cut(s) 33, 396
Mox20I TGGCCA 2 cut(s) 193, 960
Mph1103I ATGCAT 1 cut(s) 988
MroNI GCCGGC 1 cut(s) 173
MscI TGGCCA 2 cut(s) 193, 960
MseI TTAA 3 cut(s) 1277, 1337, 1350
MslI CAYNNNNRTG 4 cut(s) 199, 912, 991, 1217
Msp20I TGGCCA 2 cut(s) 193, 960
MspA1I CMGCKG 1 cut(s) 349
MspI CCGG 6 cut(s) 38, 174, 328, 548, 809, 857
MspR9I CCNGG 7 cut(s) 329, 354, 548, 724, 842, 1200, 1376
MunI CAATTG 1 cut(s) 1059
Mva1269I GAATGC 1 cut(s) 1237
MvaI CCWGG 5 cut(s) 354, 724, 842, 1200, 1376
MwoI GCNNNNNNNGC 3 cut(s) 38, 94, 258
NaeI GCCGGC 1 cut(s) 175
NarI GGCGCC 1 cut(s) 136
NciI CCSGG 2 cut(s) 329, 548
NdeII GATC 5 cut(s) 55, 115, 587, 895, 952
NgoMIV GCCGGC 1 cut(s) 173
NheI GCTAGC 1 cut(s) 1237
NlaIII CATG 9 cut(s) 80, 96, 641, 836, 911, 959, 996, 1395, 1450
NlaIV GGNNCC 9 cut(s) 36, 137, 333, 506, 813, 879, 1213, 1550, 1573
NmuCI GTSAC 5 cut(s) 230, 302, 511, 1466, 1564
NsiI ATGCAT 1 cut(s) 988
NspI RCATGY 4 cut(s) 641, 836, 996, 1395
OliI CACNNNNGTG 1 cut(s) 1217
PciI ACATGT 3 cut(s) 637, 832, 992
PcsI WCGNNNNNNNCGW 2 cut(s) 294, 507
PctI GAATGC 1 cut(s) 1237
PdiI GCCGGC 1 cut(s) 175
PfeI GAWTC 5 cut(s) 18, 384, 674, 707, 1302
PflFI GACNNNGTC 1 cut(s) 1034
PflMI CCANNNNNTGG 2 cut(s) 291, 823
PfoI TCCNGGA 2 cut(s) 840, 1374
PkrI GCNGC 3 cut(s) 34, 348, 351
PleI GAGTC 3 cut(s) 421, 763, 1490
PluTI GGCGCC 1 cut(s) 139
PpsI GAGTC 3 cut(s) 421, 763, 1490
Ppu21I YACGTR 1 cut(s) 655
PpuMI RGGWCCY 1 cut(s) 1572
PscI ACATGT 3 cut(s) 637, 832, 992
Psp5II RGGWCCY 1 cut(s) 1572
Psp6I CCWGG 5 cut(s) 352, 722, 840, 1198, 1374
PspFI CCCAGC 1 cut(s) 1025
PspGI CCWGG 5 cut(s) 352, 722, 840, 1198, 1374
PspN4I GGNNCC 9 cut(s) 36, 137, 333, 506, 813, 879, 1213, 1550, 1573
PspPI GGNCC 5 cut(s) 223, 438, 545, 838, 1572
PspPPI RGGWCCY 1 cut(s) 1572
PstI CTGCAG 1 cut(s) 51
PsyI GACNNNGTC 1 cut(s) 1034
PvuII CAGCTG 1 cut(s) 349
RsaI GTAC 5 cut(s) 653, 764, 1176, 1245, 1408
RsaNI GTAC 5 cut(s) 652, 763, 1175, 1244, 1407
RseI CAYNNNNRTG 4 cut(s) 199, 912, 991, 1217
SaqAI TTAA 3 cut(s) 1277, 1337, 1350
SatI GCNGC 3 cut(s) 33, 347, 350
Sau3AI GATC 5 cut(s) 55, 115, 587, 895, 952
Sau96I GGNCC 5 cut(s) 223, 438, 545, 838, 1572
SchI GAGTC 3 cut(s) 422, 763, 1490
ScrFI CCNGG 7 cut(s) 329, 354, 548, 724, 842, 1200, 1376
SduI GDGCHC 6 cut(s) 206, 334, 507, 611, 628, 816
SfaNI GCATC 5 cut(s) 333, 628, 912, 973, 995
SfcI CTRYAG 2 cut(s) 47, 1327
SfoI GGCGCC 1 cut(s) 137
SinI GGWCC 3 cut(s) 223, 838, 1572
SmiMI CAYNNNNRTG 4 cut(s) 199, 912, 991, 1217
SpeI ACTAGT 1 cut(s) 797
Sse9I AATT 7 cut(s) 1045, 1059, 1354, 1363, 1419, 1460, 1538
SsiI CCGC 4 cut(s) 32, 370, 592, 1241
SspDI GGCGCC 1 cut(s) 135
SspI AATATT 2 cut(s) 1310, 1347
SspMI CTAG 4 cut(s) 798, 939, 1065, 1238
StyD4I CCNGG 7 cut(s) 327, 352, 546, 722, 840, 1198, 1374
StyI CCWWGG 1 cut(s) 1297
TaaI ACNGT 4 cut(s) 491, 537, 1036, 1331
TaiI ACGT 2 cut(s) 232, 657
TaqI TCGA 4 cut(s) 8, 58, 288, 586
TasI AATT 7 cut(s) 1045, 1059, 1354, 1363, 1419, 1460, 1538
TauI GCSGC 1 cut(s) 35
TfiI GAWTC 5 cut(s) 18, 384, 674, 707, 1302
Tru1I TTAA 3 cut(s) 1277, 1337, 1350
Tru9I TTAA 3 cut(s) 1277, 1337, 1350
TscAI CASTG 4 cut(s) 307, 494, 1009, 1039
TseFI GTSAC 5 cut(s) 230, 302, 511, 1466, 1564
TseI GCWGC 2 cut(s) 346, 349
Tsp45I GTSAC 5 cut(s) 230, 302, 511, 1466, 1564
TspDTI ATGAA 2 cut(s) 62, 1244
TspRI CASTG 4 cut(s) 307, 494, 1009, 1039
Tth111I GACNNNGTC 1 cut(s) 1034
Van91I CCANNNNNTGG 2 cut(s) 291, 823
VpaK11BI GGWCC 3 cut(s) 223, 838, 1572
XapI RAATTY 3 cut(s) 1045, 1363, 1419
XceI RCATGY 4 cut(s) 641, 836, 996, 1395
XcmI CCANNNNNNNNNTGG 1 cut(s) 1065
XspI CTAG 4 cut(s) 798, 939, 1065, 1238
Zsp2I ATGCAT 1 cut(s) 988
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.