Rmu_sc0004016.1_g000013

Domain of unknown function (DUF4283)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0004016.1
OG0000044
Physical Location & Seq
Reverse (-)
72293 .. 73917
1625 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0004016.1_g000013.1.cds

Sequence Viewer

Length: 948 bp
atgtcttccatattgcttcagcagtctcacattcttccaccagttggttttcaaggggctgcggccgctcaaaggctaagctttgccttggacgactcctcagctatatgcccatggagttttctggaacctctatctgttacgctagctaccagggttgcgcctgaactaaaggtttgcaagaccaagacttttgcctctgttcttgctgacaaggaagagcctcatattcccatcagtcaattgccggctccaacaatccggggtgatactgtttgtatccggatcaatgaggagatttatcaacaacaactacgaagttgtagtaataatctaatagggtgtctactcctccgcaagggatccttgccaatgaaaatagaggttcttaaatcttccttgaattctctatggagatcgttagggccttggcggctagttccgaatggtaagggttattttgatctccacttcagttctgaaactgatatgcgcaggctcaatgcagcaacaaaagaacagcgttatggttattttgcaagagttctggtggatgttgatctccatggaacccttcccacgacaatcatggttgaatttgatgattttgttaatcatgtcttagagaaagctgcccttgatttaatggaagagcaagcacaacgactcatagaagatgactgccaagccccggccaatatgcaagcaaatcatgataatgaagattcagacaatggctctcatgttagcagcactccatctcgaacttggggtgccatctttgaggaagaacgaggtagtgctgatgatccttcaagtgctttgcctagtttgggtccgcctccaggctttgagtctcgagctgccatggaaattgatgttgtagcaaagtttgttaatggtgaagacattgatggatttatgccagttcttacaaaatcgcaatag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4283 zf-CCHC_4

Protein Analysis

315

Amino Acids

34.71

Weight (kDa)

4.94

Isoelectric Point (pI)

53.58

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000044)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G07760 AT5G28823
fragaria_vesca FvH4_1g13572 FvH4_2g03281 FvH4_2g04691 FvH4_2g08332 FvH4_2g08333 FvH4_2g15313 FvH4_2g26101 FvH4_2g29541 FvH4_3g06911 FvH4_3g34351 FvH4_3g43733 FvH4_4g02432 FvH4_4g05601 FvH4_4g08213 FvH4_4g09961 FvH4_4g10131 FvH4_4g20001 FvH4_4g20002 FvH4_5g01051 FvH4_5g01401 FvH4_5g27943 FvH4_6g09220 FvH4_6g17383 FvH4_6g35491 FvH4_6g46421 FvH4_7g04151 FvH4_7g13962 FvH4_7g18611 FvH4_7g19491 FvH4_7g19511 FvH4_7g26562
malus_domestica MD06G1221600.v1.1
pyrus_communis pycom10g21150
rosa_chinensis RchiOBHm_Chr1g0337571 RchiOBHm_Chr2g0168771 RchiOBHm_Chr3g0453631 RchiOBHm_Chr6g0278581
rosa_laevigata RLG00000001899 RLG00000001925 RLG00000002026 RLG00000003410 RLG00000003767 RLG00000004304 RLG00000004473 RLG00000004677 RLG00000006856 RLG00000007994 RLG00000009888 RLG00000011627 RLG00000012174 RLG00000012217 RLG00000013118 RLG00000013736 RLG00000014194 RLG00000014251 RLG00000015011 RLG00000015057 RLG00000015235 RLG00000017416 RLG00000018052 RLG00000018537 RLG00000019968 RLG00000020096 RLG00000020263 RLG00000022606 RLG00000023119 RLG00000028111 RLG00000029686 RLG00000030126 RLG00000031124 RLG00000031236 RLG00000032766 RLG00000033171 RLG00000033548 RLG00000033987 RLG00000034062 RLG00000035115 RLG00000035863
rosa_multiflora Rmu_co8036712.1_g000001 Rmu_co8080248.1_g000001 Rmu_co8208334.1_g000001 Rmu_co8253451.1_g000001 Rmu_co8393241.1_g000001 Rmu_co8522225.1_g000005 Rmu_sc0000060.1_g000030 Rmu_sc0000060.1_g000031 Rmu_sc0000060.1_g000032 Rmu_sc0000090.1_g000008 Rmu_sc0000149.1_g000051 Rmu_sc0000149.1_g000058 Rmu_sc0000309.1_g000050 Rmu_sc0000370.1_g000022 Rmu_sc0000370.1_g000023 Rmu_sc0000370.1_g000024 Rmu_sc0000418.1_g000018 Rmu_sc0000427.1_g000014 Rmu_sc0000427.1_g000015 Rmu_sc0000434.1_g000008 Rmu_sc0000487.1_g000038 Rmu_sc0000487.1_g000039 Rmu_sc0000569.1_g000029 Rmu_sc0000580.1_g000097 Rmu_sc0000595.1_g000068 Rmu_sc0000607.1_g000027 Rmu_sc0000738.1_g000004 Rmu_sc0000758.1_g000001 Rmu_sc0000758.1_g000002 Rmu_sc0000870.1_g000019 Rmu_sc0000924.1_g000040 Rmu_sc0000924.1_g000041 Rmu_sc0000999.1_g000037 Rmu_sc0001001.1_g000001 Rmu_sc0001010.1_g000080 Rmu_sc0001075.1_g000041 Rmu_sc0001097.1_g000016 Rmu_sc0001173.1_g000020 Rmu_sc0001258.1_g000010 Rmu_sc0001425.1_g000031 Rmu_sc0001493.1_g000020 Rmu_sc0001493.1_g000021 Rmu_sc0001644.1_g000024 Rmu_sc0001648.1_g000039 Rmu_sc0001662.1_g000002 Rmu_sc0001849.1_g000046 Rmu_sc0001851.1_g000038 Rmu_sc0001861.1_g000006 Rmu_sc0001899.1_g000008 Rmu_sc0002231.1_g000023 Rmu_sc0002393.1_g000012 Rmu_sc0002515.1_g000010 Rmu_sc0002551.1_g000013 Rmu_sc0002680.1_g000029 Rmu_sc0002700.1_g000030 Rmu_sc0002700.1_g000031 Rmu_sc0002709.1_g000035 Rmu_sc0002779.1_g000017 Rmu_sc0003267.1_g000040 Rmu_sc0003306.1_g000009 Rmu_sc0003338.1_g000014 Rmu_sc0003522.1_g000038 Rmu_sc0003522.1_g000039 Rmu_sc0003653.1_g000031 Rmu_sc0003901.1_g000003 Rmu_sc0003920.1_g000009 Rmu_sc0004014.1_g000009 Rmu_sc0004016.1_g000013 Rmu_sc0004031.1_g000002 Rmu_sc0004106.1_g000001 Rmu_sc0004432.1_g000004 Rmu_sc0004481.1_g000020 Rmu_sc0004874.1_g000005 Rmu_sc0004928.1_g000005 Rmu_sc0005065.1_g000053 Rmu_sc0005091.1_g000005 Rmu_sc0005217.1_g000015 Rmu_sc0005242.1_g000002 Rmu_sc0005300.1_g000011 Rmu_sc0005400.1_g000004 Rmu_sc0005486.1_g000007 Rmu_sc0005527.1_g000015 Rmu_sc0006059.1_g000021 Rmu_sc0006087.1_g000004 Rmu_sc0006184.1_g000006 Rmu_sc0006184.1_g000007 Rmu_sc0006578.1_g000006 Rmu_sc0006730.1_g000010 Rmu_sc0006736.1_g000030 Rmu_sc0006736.1_g000033 Rmu_sc0007333.1_g000018 Rmu_sc0007856.1_g000010 Rmu_sc0008231.1_g000003 Rmu_sc0009862.1_g000012 Rmu_sc0010547.1_g000001 Rmu_sc0010547.1_g000003 Rmu_sc0010632.1_g000012 Rmu_sc0010747.1_g000008 Rmu_sc0011075.1_g000009 Rmu_sc0011565.1_g000004 Rmu_sc0011641.1_g000003 Rmu_sc0013102.1_g000013 Rmu_sc0013160.1_g000006 Rmu_sc0014846.1_g000004 Rmu_sc0017037.1_g000003 Rmu_sc0018203.1_g000001 Rmu_sc0018204.1_g000001 Rmu_sc0018348.1_g000001 Rmu_sc0019354.1_g000002 Rmu_sc0021630.1_g000002 Rmu_sc0022987.1_g000002 Rmu_sc0024469.1_g000005 Rmu_sc0033519.1_g000001 Rmu_sc0033519.1_g000002 Rmu_sc0033519.1_g000003 Rmu_sc0042775.1_g000001 Rmu_ssc0000110.1_g000003 Rmu_ssc0000110.1_g000004 Rmu_ssc0000126.1_g000068 Rmu_ssc0000200.1_g000007 Rmu_ssc0000295.1_g000003 Rmu_ssc0000295.1_g000004 Rmu_ssc0000299.1_g000010 Rmu_ssc0000308.1_g000024 Rmu_ssc0000339.1_g000006 Rmu_ssc0000385.1_g000012 Rmu_ssc0000409.1_g000004 Rmu_ssc0000421.1_g000004
rosa_roxburghii Rroxscaffold_156G00440360 Rroxscaffold_166G00440800 Rroxscaffold_1G00039040 Rroxscaffold_1G00039050 Rroxscaffold_1G00073950 Rroxscaffold_2G00091710 Rroxscaffold_2G00120050 Rroxscaffold_2G00122590 Rroxscaffold_3G00219700 Rroxscaffold_3G00264140 Rroxscaffold_4G00290600 Rroxscaffold_4G00323610 Rroxscaffold_4G00328460 Rroxscaffold_5G00343440 Rroxscaffold_5G00343570 Rroxscaffold_5G00378540 Rroxscaffold_5G00385090 Rroxscaffold_7G00169130 Rroxscaffold_7G00216420
rosa_rugosa Rorug01G0065800 Rorug01G0073500 Rorug01G0091700 Rorug01G0096500 Rorug01G0204700.1 Rorug01G0249100 Rorug01G0333800 Rorug01G0333900 Rorug01G0339500 Rorug01G0431300 Rorug02G0085400 Rorug02G0117500 Rorug02G0130900 Rorug02G0178800 Rorug02G0226700 Rorug02G0336300 Rorug02G0338700 Rorug02G0351400 Rorug02G0459900 Rorug03G0187000 Rorug03G0223700 Rorug03G0291300 Rorug03G0291300 Rorug03G0311100 Rorug03G0316900 Rorug03G0346000 Rorug04G0014500 Rorug04G0014600 Rorug04G0124100 Rorug04G0136500 Rorug04G0302000 Rorug04G0338100 Rorug04G0338200 Rorug04G0413100 Rorug05G0182200 Rorug05G0226500 Rorug05G0273300 Rorug05G0292200 Rorug05G0292200 Rorug05G0392500 Rorug05G0394500 Rorug05G0394600 Rorug05G0505600.1 Rorug06G0351400 Rorug06G0393400 Rorug06G0393600 Rorug06G0470000 Rorug07G0063100 Rorug07G0086800 Rorug07G0109200 Rorug07G0236100
rosa_samantha Rh1AG010800 Rh1AG011100 Rh1AG064900 Rh1AG088000 Rh1AG207100 Rh1AG262000 Rh1AG300800 Rh1BG043000 Rh1BG144600 Rh1BG180700 Rh1BG180800 Rh1BG328800 Rh1BG399400 Rh1CG041400 Rh1CG047300 Rh1CG379700 Rh1DG036500 Rh1DG083000 Rh1DG210700 Rh1DG210800 Rh1DG231100 Rh2AG007900 Rh2AG055500 Rh2AG339100 Rh2AG368100 Rh2BG243300 Rh2BG258900 Rh2BG292000 Rh2BG333500 Rh2BG387300 Rh2BG612800 Rh2BG619100 Rh2CG026500 Rh2CG163600 Rh2CG535700 Rh2DG186400 Rh2DG235000 Rh2DG314500 Rh2DG388500 Rh2DG391400 Rh2DG496900 Rh2DG526700 Rh2DG570700 Rh3AG330700 Rh3BG266900 Rh3CG236000 Rh3CG340400 Rh3DG090000 Rh3DG278400 Rh3DG297600 Rh3DG362600 Rh4AG001300 Rh4AG023300 Rh4AG097100 Rh4AG427000 Rh4BG029400 Rh4BG032400 Rh4BG086000 Rh4BG249200 Rh4CG001900 Rh4CG040600 Rh4CG093000 Rh4CG106300 Rh4CG113200 Rh4CG113900 Rh4DG002300 Rh4DG144400 Rh4DG234200 Rh5AG043700 Rh5AG084900 Rh5AG161500 Rh5AG409000 Rh5AG457200 Rh5AG457900 Rh5AG473700 Rh5AG520600 Rh5BG042100 Rh5BG124100 Rh5BG323500 Rh5BG417200 Rh5BG443700 Rh5BG451500 Rh5BG464900 Rh5BG470400 Rh5BG522500 Rh5CG068800 Rh5CG178300 Rh5CG231000 Rh5CG258600 Rh5CG394500 Rh5CG473700 Rh5DG164700 Rh5DG235400 Rh5DG261300 Rh5DG304900 Rh5DG334500 Rh5DG424300 Rh5DG458400 Rh5DG478600 Rh5DG552300 Rh5DG552700 Rh6AG037000 Rh6AG042100 Rh6AG255500 Rh6AG283400 Rh6AG291800 Rh6BG049600 Rh6BG080700 Rh6BG114600 Rh6BG128900 Rh6BG352500 Rh6CG052400 Rh6CG112900 Rh6CG113000 Rh6CG131300 Rh6CG157700 Rh6CG243200 Rh6CG254100 Rh6CG275700 Rh6CG299700 Rh6CG309100 Rh6CG317600 Rh6CG342600 Rh6CG471900 Rh6DG038200 Rh6DG102300 Rh6DG114400 Rh6DG225900 Rh6DG292900 Rh6DG320700 Rh6DG512800 Rh7AG217700 Rh7AG313900 Rh7AG446000 Rh7AG472600 Rh7BG223100 Rh7BG349900 Rh7BG352000 Rh7CG160200 Rh7CG233900 Rh7CG242700 Rh7CG273900 Rh7CG306400 Rh7CG322200 Rh7DG053800 Rh7DG077800 Rh7DG227700 Rh7DG404800
rosa_wichuraiana Rw0G003990 Rw2G022110 Rw2G024890 Rw6G005700 Rw7G008770

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 494
AccB1I GGYRCC 1 cut(s) 773
AccB7I CCANNNNNTGG 1 cut(s) 44
AccBSI CCGCTC 1 cut(s) 68
AccI GTMKAC 1 cut(s) 346
AccIII TCCGGA 1 cut(s) 282
AciI CCGC 5 cut(s) 62, 66, 355, 433, 839
AclWI GGATC 4 cut(s) 293, 357, 370, 803
AcoI YGGCCR 2 cut(s) 63, 693
AcsI RAATTY 2 cut(s) 403, 596
AcuI CTGAAG 1 cut(s) 457
AfiI CCNNNNNNNGG 6 cut(s) 44, 72, 358, 691, 833, 845
AgsI TTSAA 4 cut(s) 53, 403, 596, 816
AjnI CCWGG 2 cut(s) 152, 844
AluBI AGCT 5 cut(s) 81, 104, 149, 632, 863
AluI AGCT 5 cut(s) 81, 104, 149, 632, 863
Alw26I GTCTC 2 cut(s) 30, 861
AlwI GGATC 4 cut(s) 293, 357, 370, 803
Ama87I CYCGRG 1 cut(s) 858
Aor13HI TCCGGA 1 cut(s) 282
AoxI GGCC 3 cut(s) 63, 425, 693
ApeKI GCWGC 5 cut(s) 59, 506, 632, 750, 863
ApoI RAATTY 2 cut(s) 403, 596
AspLEI GCGC 2 cut(s) 163, 495
AspS9I GGNCC 2 cut(s) 425, 836
AsuC2I CCSGG 2 cut(s) 263, 692
AsuHPI GGTGA 2 cut(s) 278, 914
AsuNHI GCTAGC 1 cut(s) 145
AvaI CYCGRG 1 cut(s) 858
AvaII GGWCC 1 cut(s) 836
BamHI GGATCC 1 cut(s) 362
BanI GGYRCC 1 cut(s) 773
BbsI GAAGAC 1 cut(s) 912
BbvCI CCTCAGC 1 cut(s) 100
BbvI GCAGC 5 cut(s) 46, 518, 619, 762, 850
BccI CCATC 4 cut(s) 242, 766, 785, 908
BciT130I CCWGG 2 cut(s) 154, 846
BciVI GTATCC 1 cut(s) 290
BcnI CCSGG 2 cut(s) 263, 692
BcoDI GTCTC 2 cut(s) 30, 861
BfaI CTAG 3 cut(s) 146, 437, 828
BfuI GTATCC 1 cut(s) 290
BglI GCCNNNNNGGC 1 cut(s) 433
BisI GCNGC 8 cut(s) 60, 63, 66, 434, 507, 633, 751, 864
BlpI GCTNAGC 1 cut(s) 77
BlsI GCNGC 8 cut(s) 61, 64, 67, 435, 508, 634, 752, 865
Bme1390I CCNGG 4 cut(s) 154, 263, 692, 846
Bme18I GGWCC 1 cut(s) 836
BmeT110I CYCGRG 1 cut(s) 858
BmgT120I GGNCC 2 cut(s) 425, 836
BmiI GGNNCC 6 cut(s) 129, 252, 364, 571, 775, 837
BmrFI CCNGG 4 cut(s) 154, 263, 692, 846
BmtI GCTAGC 1 cut(s) 149
BpiI GAAGAC 1 cut(s) 912
BpmI CTGGAG 1 cut(s) 828
Bpu10I CCTNAGC 1 cut(s) 100
Bpu1102I GCTNAGC 1 cut(s) 77
BpuMI CCSGG 2 cut(s) 263, 692
BsaBI GATNNNNATC 1 cut(s) 558
BsaJI CCNNGG 8 cut(s) 87, 113, 153, 262, 428, 565, 690, 867
BsaWI WCCGGW 1 cut(s) 282
Bsc4I CCNNNNNNNGG 6 cut(s) 44, 72, 358, 691, 833, 845
Bse118I RCCGGY 1 cut(s) 247
Bse1I ACTGG 2 cut(s) 41, 926
Bse8I GATNNNNATC 1 cut(s) 558
BseAI TCCGGA 1 cut(s) 282
BseBI CCWGG 2 cut(s) 154, 846
BseDI CCNNGG 8 cut(s) 87, 113, 153, 262, 428, 565, 690, 867
BseGI GGATG 1 cut(s) 559
BseJI GATNNNNATC 1 cut(s) 558
BseLI CCNNNNNNNGG 6 cut(s) 44, 72, 358, 691, 833, 845
BseMII CTCAG 1 cut(s) 114
BseNI ACTGG 2 cut(s) 41, 926
BseRI GAGGAG 3 cut(s) 88, 308, 341
BseX3I CGGCCG 1 cut(s) 63
BseXI GCAGC 5 cut(s) 46, 518, 619, 762, 850
Bsh1285I CGRYCG 1 cut(s) 66
BshFI GGCC 3 cut(s) 65, 427, 695
BshNI GGYRCC 1 cut(s) 773
BsiEI CGRYCG 1 cut(s) 66
BsiHKCI CYCGRG 1 cut(s) 858
BsiSI CCGG 4 cut(s) 248, 262, 283, 692
BslI CCNNNNNNNGG 6 cut(s) 44, 72, 358, 691, 833, 845
BsmAI GTCTC 2 cut(s) 30, 861
BsnI GGCC 3 cut(s) 65, 427, 695
BsoBI CYCGRG 1 cut(s) 858
Bsp13I TCCGGA 1 cut(s) 282
Bsp143I GATC 6 cut(s) 285, 362, 416, 463, 559, 808
Bsp1720I GCTNAGC 1 cut(s) 77
Bsp19I CCATGG 3 cut(s) 113, 565, 867
BspACI CCGC 5 cut(s) 62, 66, 355, 433, 839
BspANI GGCC 3 cut(s) 65, 427, 695
BspCNI CTCAG 1 cut(s) 113
BspEI TCCGGA 1 cut(s) 282
BspHI TCATGA 1 cut(s) 712
BspLI GGNNCC 6 cut(s) 129, 252, 364, 571, 775, 837
BspOI GCTAGC 1 cut(s) 149
BspPI GGATC 4 cut(s) 293, 357, 370, 803
BspQI GCTCTTC 2 cut(s) 213, 645
BspT107I GGYRCC 1 cut(s) 773
BsrBI CCGCTC 1 cut(s) 68
BsrFI RCCGGY 1 cut(s) 247
BsrI ACTGG 2 cut(s) 41, 926
BssAI RCCGGY 1 cut(s) 247
BssECI CCNNGG 8 cut(s) 87, 113, 153, 262, 428, 565, 690, 867
BssMI GATC 6 cut(s) 285, 362, 416, 463, 559, 808
BssT1I CCWWGG 5 cut(s) 87, 113, 428, 565, 867
Bst2UI CCWGG 2 cut(s) 154, 846
Bst4CI ACNGT 1 cut(s) 274
Bst6I CTCTTC 2 cut(s) 213, 645
BstC8I GCNNGC 5 cut(s) 147, 249, 497, 657, 705
BstDEI CTNAG 3 cut(s) 77, 100, 622
BstDSI CCRYGG 3 cut(s) 113, 565, 867
BstENI CCTNNNNNAGG 1 cut(s) 356
BstF5I GGATG 1 cut(s) 559
BstHHI GCGC 2 cut(s) 163, 495
BstKTI GATC 6 cut(s) 288, 365, 419, 466, 562, 811
BstMAI GTCTC 2 cut(s) 30, 861
BstMBI GATC 6 cut(s) 285, 362, 416, 463, 559, 808
BstMCI CGRYCG 1 cut(s) 66
BstMWI GCNNNNNNNGC 2 cut(s) 65, 433
BstNI CCWGG 2 cut(s) 154, 846
BstSCI CCNGG 4 cut(s) 152, 261, 690, 844
BstV1I GCAGC 5 cut(s) 46, 518, 619, 762, 850
BstV2I GAAGAC 1 cut(s) 912
BstX2I RGATCY 1 cut(s) 362
BstYI RGATCY 1 cut(s) 362
BstZI CGGCCG 1 cut(s) 63
BsuI GTATCC 1 cut(s) 290
BsuRI GGCC 3 cut(s) 65, 427, 695
BtgI CCRYGG 3 cut(s) 113, 565, 867
BtsCI GGATG 1 cut(s) 559
Cac8I GCNNGC 5 cut(s) 147, 249, 497, 657, 705
CciI TCATGA 1 cut(s) 712
CciNI GCGGCCGC 1 cut(s) 63
CfoI GCGC 2 cut(s) 163, 495
Cfr10I RCCGGY 1 cut(s) 247
Cfr13I GGNCC 2 cut(s) 425, 836
CviAII CATG 7 cut(s) 114, 566, 589, 617, 713, 743, 868
DdeI CTNAG 3 cut(s) 77, 100, 622
DpnI GATC 6 cut(s) 287, 364, 418, 465, 561, 810
DpnII GATC 6 cut(s) 285, 362, 416, 463, 559, 808
EaeI YGGCCR 2 cut(s) 63, 693
EagI CGGCCG 1 cut(s) 63
Eam1104I CTCTTC 2 cut(s) 213, 645
EarI CTCTTC 2 cut(s) 213, 645
EciI GGCGGA 1 cut(s) 828
EclXI CGGCCG 1 cut(s) 63
Eco130I CCWWGG 5 cut(s) 87, 113, 428, 565, 867
Eco47I GGWCC 1 cut(s) 836
Eco52I CGGCCG 1 cut(s) 63
Eco57I CTGAAG 1 cut(s) 457
Eco88I CYCGRG 1 cut(s) 858
EcoNI CCTNNNNNAGG 1 cut(s) 356
EcoO109I RGGNCCY 1 cut(s) 425
EcoRI GAATTC 1 cut(s) 403
EcoRII CCWGG 2 cut(s) 152, 844
EcoT14I CCWWGG 5 cut(s) 87, 113, 428, 565, 867
ErhI CCWWGG 5 cut(s) 87, 113, 428, 565, 867
FaeI CATG 7 cut(s) 117, 569, 592, 620, 716, 746, 871
FalI AAGNNNNNCTT 4 cut(s) 350, 382, 621, 653
FatI CATG 7 cut(s) 113, 565, 588, 616, 712, 742, 867
FblI GTMKAC 1 cut(s) 346
Fnu4HI GCNGC 8 cut(s) 60, 63, 66, 434, 507, 633, 751, 864
FokI GGATG 1 cut(s) 566
Fsp4HI GCNGC 8 cut(s) 60, 63, 66, 434, 507, 633, 751, 864
FspBI CTAG 3 cut(s) 146, 437, 828
FspI TGCGCA 1 cut(s) 494
GlaI GCGC 2 cut(s) 162, 494
GluI GCNGC 8 cut(s) 60, 63, 66, 434, 507, 633, 751, 864
GsuI CTGGAG 1 cut(s) 828
HaeIII GGCC 3 cut(s) 65, 427, 695
HapII CCGG 4 cut(s) 248, 262, 283, 692
HhaI GCGC 2 cut(s) 163, 495
Hin1II CATG 7 cut(s) 117, 569, 592, 620, 716, 746, 871
Hin6I GCGC 2 cut(s) 161, 493
HinP1I GCGC 2 cut(s) 161, 493
HindIII AAGCTT 1 cut(s) 79
HinfI GANTC 4 cut(s) 95, 666, 725, 854
HpaII CCGG 4 cut(s) 248, 262, 283, 692
HphI GGTGA 2 cut(s) 278, 914
Hpy166II GTNNAC 1 cut(s) 347
Hpy188I TCNGA 3 cut(s) 444, 481, 730
Hpy188III TCNNGA 5 cut(s) 125, 283, 713, 762, 858
Hpy8I GTNNAC 1 cut(s) 347
HpyAV CCTTC 2 cut(s) 584, 822
HpyCH4III ACNGT 1 cut(s) 274
HpyCH4V TGCA 4 cut(s) 180, 506, 539, 703
HpyF10VI GCNNNNNNNGC 2 cut(s) 65, 433
HpyF3I CTNAG 3 cut(s) 77, 100, 622
Hsp92II CATG 7 cut(s) 117, 569, 592, 620, 716, 746, 871
HspAI GCGC 2 cut(s) 161, 493
Kpn2I TCCGGA 1 cut(s) 282
KroI GCCGGC 1 cut(s) 247
KroNI GCCGGC 1 cut(s) 249
Kzo9I GATC 6 cut(s) 285, 362, 416, 463, 559, 808
LguI GCTCTTC 2 cut(s) 213, 645
LmnI GCTCC 1 cut(s) 256
Lsp1109I GCAGC 5 cut(s) 46, 518, 619, 762, 850
MaeI CTAG 3 cut(s) 146, 437, 828
MaeIII GTNAC 1 cut(s) 139
MalI GATC 6 cut(s) 287, 364, 418, 465, 561, 810
MbiI CCGCTC 1 cut(s) 68
MboI GATC 6 cut(s) 285, 362, 416, 463, 559, 808
MboII GAAGA 8 cut(s) 26, 230, 387, 662, 686, 734, 800, 917
MfeI CAATTG 1 cut(s) 242
MflI RGATCY 1 cut(s) 362
MluCI AATT 4 cut(s) 242, 403, 596, 873
MlyI GAGTC 3 cut(s) 89, 660, 863
MmeI TCCRAC 1 cut(s) 278
MroI TCCGGA 1 cut(s) 282
MroNI GCCGGC 1 cut(s) 247
MseI TTAA 4 cut(s) 390, 612, 644, 897
MslI CAYNNNNRTG 1 cut(s) 717
MspI CCGG 4 cut(s) 248, 262, 283, 692
MspR9I CCNGG 4 cut(s) 154, 263, 692, 846
MunI CAATTG 1 cut(s) 242
MvaI CCWGG 2 cut(s) 154, 846
MwoI GCNNNNNNNGC 2 cut(s) 65, 433
NaeI GCCGGC 1 cut(s) 249
NciI CCSGG 2 cut(s) 263, 692
NcoI CCATGG 3 cut(s) 113, 565, 867
NdeII GATC 6 cut(s) 285, 362, 416, 463, 559, 808
NgoMIV GCCGGC 1 cut(s) 247
NheI GCTAGC 1 cut(s) 145
NlaIII CATG 7 cut(s) 117, 569, 592, 620, 716, 746, 871
NlaIV GGNNCC 6 cut(s) 129, 252, 364, 571, 775, 837
NotI GCGGCCGC 1 cut(s) 63
NsbI TGCGCA 1 cut(s) 494
PaeR7I CTCGAG 1 cut(s) 858
PagI TCATGA 1 cut(s) 712
PciSI GCTCTTC 2 cut(s) 213, 645
PdiI GCCGGC 1 cut(s) 249
PfeI GAWTC 1 cut(s) 725
PflMI CCANNNNNTGG 1 cut(s) 44
PkrI GCNGC 8 cut(s) 61, 64, 67, 435, 508, 634, 752, 865
PleI GAGTC 3 cut(s) 89, 660, 862
PpsI GAGTC 3 cut(s) 89, 660, 862
Psp6I CCWGG 2 cut(s) 152, 844
PspGI CCWGG 2 cut(s) 152, 844
PspN4I GGNNCC 6 cut(s) 129, 252, 364, 571, 775, 837
PspPI GGNCC 2 cut(s) 425, 836
PsuI RGATCY 1 cut(s) 362
RseI CAYNNNNRTG 1 cut(s) 717
SapI GCTCTTC 2 cut(s) 213, 645
SaqAI TTAA 4 cut(s) 390, 612, 644, 897
SatI GCNGC 8 cut(s) 60, 63, 66, 434, 507, 633, 751, 864
Sau3AI GATC 6 cut(s) 285, 362, 416, 463, 559, 808
Sau96I GGNCC 2 cut(s) 425, 836
SchI GAGTC 3 cut(s) 89, 660, 863
ScrFI CCNGG 4 cut(s) 154, 263, 692, 846
SetI ASST 9 cut(s) 83, 106, 133, 151, 177, 387, 634, 799, 865
Sfr274I CTCGAG 1 cut(s) 858
SinI GGWCC 1 cut(s) 836
SlaI CTCGAG 1 cut(s) 858
SmiMI CAYNNNNRTG 1 cut(s) 717
SmlI CTYRAG 1 cut(s) 858
SmoI CTYRAG 1 cut(s) 858
Sse9I AATT 4 cut(s) 242, 403, 596, 873
SsiI CCGC 5 cut(s) 62, 66, 355, 433, 839
SspMI CTAG 3 cut(s) 146, 437, 828
StyD4I CCNGG 4 cut(s) 152, 261, 690, 844
StyI CCWWGG 5 cut(s) 87, 113, 428, 565, 867
TaaI ACNGT 1 cut(s) 274
TaqI TCGA 2 cut(s) 763, 859
TasI AATT 4 cut(s) 242, 403, 596, 873
TauI GCSGC 3 cut(s) 65, 68, 436
TfiI GAWTC 1 cut(s) 725
Tru1I TTAA 4 cut(s) 390, 612, 644, 897
Tru9I TTAA 4 cut(s) 390, 612, 644, 897
TseI GCWGC 5 cut(s) 59, 506, 632, 750, 863
TspDTI ATGAA 2 cut(s) 389, 735
Van91I CCANNNNNTGG 1 cut(s) 44
VpaK11BI GGWCC 1 cut(s) 836
XagI CCTNNNNNAGG 1 cut(s) 356
XapI RAATTY 2 cut(s) 403, 596
XcmI CCANNNNNNNNNTGG 2 cut(s) 586, 765
XhoI CTCGAG 1 cut(s) 858
XmiI GTMKAC 1 cut(s) 346
XspI CTAG 3 cut(s) 146, 437, 828
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.