AT2G07760

Ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
OG0000044
Physical Location & Seq
Reverse (-)
3584420 .. 3586278
1859 bp
Loading structure...
UTR
Exon/CDS
Intron
AT2G07760.1

Sequence Viewer

Length: 1593 bp
ATGAATTCTGTCTCAGTTTTAACTCAAGGCAAGGAAACAGAGGTCGGACCAAAAGTTGTAGTCGTAGACTCTTCCAATGTCAACTCTGTCCCTGATCCACGGTGGCCGTACTTGACTCGGTGGACGCAGAATTCTCCTTCTCCATCTCCATCAGTGATTTCTCCTTCTATCTCACTGGTGAAACCCTTGACAATTGGATCCTCGCCGAAAATTGCTCGCTCTTCTTCTCTTGACTTCGTGAATCTTACTTCTTCGCTGGATTCGACCTTACCGGTCACTGTCGAGCCTCCAATTGAACATGTGGTGAGTATTACATCATTGTCTTATTCCGCAGAAGTGTCTCTTCCTACTTCCGCCTTACCGCCAATAGTGTCTGCTACTCTCGACGAGTCCATTGCTCCTGTTAAGTTGGTCTCCCCTACTCTAAAAGGAGCTTGGGCAAAGCAGCTAAAGTTCACCTCGTCATCGGCCTCTCAGCAAGATGTTGGTGGAGCACCGATGCAATCTCATCTTGAAGCAACTAAGGAGGATAATGTTCGCTTCCCTTGGGCTGCAAAAATGGATCCAGCGGCAAGGAACCTTTACAGGGCAACCTCGCCGGAATTCATGGAAGACGGAATTCCAAAGAGGGGCTTATGGCATGTTGATGATTGTCTTATGTTTGTAGCGCCTTGGTCTACTGTAAATACATTTGATCTTCCTGAAATATCAACTATTCCTGTCTGGGTAACCCTTAAAAATATCCCAAACCGGTTGTACTCAATTCTAGGAATTAGCCATATTGCATCAGGTTTAGGTGCTCCTATGGCTACTTACAAACCTAGACTTGACCCTTCCCTAATGAGTGAGGCCAATATCTTGGTGGAAGTGGAGTTGAGTAAAGCTTTCCCTCCAAGAATTGCCGCAGTTGATAAGAAAGGCAATATATCGATGGTTAATGTTGAATATGCTTGGATCCCAGCTAAATGTGGAAAATGTGGGCAGTTAGGGCATAAGGCTTCGCGCTGTATGAAACCCCATTTGGCACATGAAAAAGTAACAGAAATTGTCTCAGAGGAGATCATTACTCCTGCTATTGTAAGTTTAGCTAGTGCCACAAATTTGGTATCGCCAATCACTCTTCAAACCAAGACCCCAATTGATGTCCCAATCACAAATTCAAAAATCCAAATCGATACAGTCTTCGATATTGAGGCTGGCCCAATCCAAGACAAAGATAATTGCACCGGAGTGGCAGATTGCTTTACAAATGTTGAAGCTGAAGTTGTAACTGAGGAAACTTGCACAGTTGAATCAGTTTTCGAAATTGCAGGCACAAAAGATAAGTTTAGTCGTTTGGGTTCTTCGTTTCCTGATGGGGATTCTCTTCATTCAGATGAAGACTCAATTGTTTCAGTTGAGTCAGACAGTGGGTCAGAATTGATGGAACTTATGACTCCATCGGGACAACGTCTTTTGCGCGAAAGACCGGTTAAACCATCCATCAAAGCTAAGGAGATACAAGCGTCCTCTACTACTCGAGGAAGAGGTAACCGTGGGCGTGGGAACCGTGGACGCGGAAATCGTGGACGCGGGAACCGTGGACGTGGCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4283 zf-CCHC_4

Protein Analysis

530

Amino Acids

57.08

Weight (kDa)

6.14

Isoelectric Point (pI)

47.45

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000044)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G07760 AT5G28823
fragaria_vesca FvH4_1g13572 FvH4_2g03281 FvH4_2g04691 FvH4_2g08332 FvH4_2g08333 FvH4_2g15313 FvH4_2g26101 FvH4_2g29541 FvH4_3g06911 FvH4_3g34351 FvH4_3g43733 FvH4_4g02432 FvH4_4g05601 FvH4_4g08213 FvH4_4g09961 FvH4_4g10131 FvH4_4g20001 FvH4_4g20002 FvH4_5g01051 FvH4_5g01401 FvH4_5g27943 FvH4_6g09220 FvH4_6g17383 FvH4_6g35491 FvH4_6g46421 FvH4_7g04151 FvH4_7g13962 FvH4_7g18611 FvH4_7g19491 FvH4_7g19511 FvH4_7g26562
malus_domestica MD06G1221600.v1.1
pyrus_communis pycom10g21150
rosa_chinensis RchiOBHm_Chr1g0337571 RchiOBHm_Chr2g0168771 RchiOBHm_Chr3g0453631 RchiOBHm_Chr6g0278581
rosa_laevigata RLG00000001899 RLG00000001925 RLG00000002026 RLG00000003410 RLG00000003767 RLG00000004304 RLG00000004473 RLG00000004677 RLG00000006856 RLG00000007994 RLG00000009888 RLG00000011627 RLG00000012174 RLG00000012217 RLG00000013118 RLG00000013736 RLG00000014194 RLG00000014251 RLG00000015011 RLG00000015057 RLG00000015235 RLG00000017416 RLG00000018052 RLG00000018537 RLG00000019968 RLG00000020096 RLG00000020263 RLG00000022606 RLG00000023119 RLG00000028111 RLG00000029686 RLG00000030126 RLG00000031124 RLG00000031236 RLG00000032766 RLG00000033171 RLG00000033548 RLG00000033987 RLG00000034062 RLG00000035115 RLG00000035863
rosa_multiflora Rmu_co8036712.1_g000001 Rmu_co8080248.1_g000001 Rmu_co8208334.1_g000001 Rmu_co8253451.1_g000001 Rmu_co8393241.1_g000001 Rmu_co8522225.1_g000005 Rmu_sc0000060.1_g000030 Rmu_sc0000060.1_g000031 Rmu_sc0000060.1_g000032 Rmu_sc0000090.1_g000008 Rmu_sc0000149.1_g000051 Rmu_sc0000149.1_g000058 Rmu_sc0000309.1_g000050 Rmu_sc0000370.1_g000022 Rmu_sc0000370.1_g000023 Rmu_sc0000370.1_g000024 Rmu_sc0000418.1_g000018 Rmu_sc0000427.1_g000014 Rmu_sc0000427.1_g000015 Rmu_sc0000434.1_g000008 Rmu_sc0000487.1_g000038 Rmu_sc0000487.1_g000039 Rmu_sc0000569.1_g000029 Rmu_sc0000580.1_g000097 Rmu_sc0000595.1_g000068 Rmu_sc0000607.1_g000027 Rmu_sc0000738.1_g000004 Rmu_sc0000758.1_g000001 Rmu_sc0000758.1_g000002 Rmu_sc0000870.1_g000019 Rmu_sc0000924.1_g000040 Rmu_sc0000924.1_g000041 Rmu_sc0000999.1_g000037 Rmu_sc0001001.1_g000001 Rmu_sc0001010.1_g000080 Rmu_sc0001075.1_g000041 Rmu_sc0001097.1_g000016 Rmu_sc0001173.1_g000020 Rmu_sc0001258.1_g000010 Rmu_sc0001425.1_g000031 Rmu_sc0001493.1_g000020 Rmu_sc0001493.1_g000021 Rmu_sc0001644.1_g000024 Rmu_sc0001648.1_g000039 Rmu_sc0001662.1_g000002 Rmu_sc0001849.1_g000046 Rmu_sc0001851.1_g000038 Rmu_sc0001861.1_g000006 Rmu_sc0001899.1_g000008 Rmu_sc0002231.1_g000023 Rmu_sc0002393.1_g000012 Rmu_sc0002515.1_g000010 Rmu_sc0002551.1_g000013 Rmu_sc0002680.1_g000029 Rmu_sc0002700.1_g000030 Rmu_sc0002700.1_g000031 Rmu_sc0002709.1_g000035 Rmu_sc0002779.1_g000017 Rmu_sc0003267.1_g000040 Rmu_sc0003306.1_g000009 Rmu_sc0003338.1_g000014 Rmu_sc0003522.1_g000038 Rmu_sc0003522.1_g000039 Rmu_sc0003653.1_g000031 Rmu_sc0003901.1_g000003 Rmu_sc0003920.1_g000009 Rmu_sc0004014.1_g000009 Rmu_sc0004016.1_g000013 Rmu_sc0004031.1_g000002 Rmu_sc0004106.1_g000001 Rmu_sc0004432.1_g000004 Rmu_sc0004481.1_g000020 Rmu_sc0004874.1_g000005 Rmu_sc0004928.1_g000005 Rmu_sc0005065.1_g000053 Rmu_sc0005091.1_g000005 Rmu_sc0005217.1_g000015 Rmu_sc0005242.1_g000002 Rmu_sc0005300.1_g000011 Rmu_sc0005400.1_g000004 Rmu_sc0005486.1_g000007 Rmu_sc0005527.1_g000015 Rmu_sc0006059.1_g000021 Rmu_sc0006087.1_g000004 Rmu_sc0006184.1_g000006 Rmu_sc0006184.1_g000007 Rmu_sc0006578.1_g000006 Rmu_sc0006730.1_g000010 Rmu_sc0006736.1_g000030 Rmu_sc0006736.1_g000033 Rmu_sc0007333.1_g000018 Rmu_sc0007856.1_g000010 Rmu_sc0008231.1_g000003 Rmu_sc0009862.1_g000012 Rmu_sc0010547.1_g000001 Rmu_sc0010547.1_g000003 Rmu_sc0010632.1_g000012 Rmu_sc0010747.1_g000008 Rmu_sc0011075.1_g000009 Rmu_sc0011565.1_g000004 Rmu_sc0011641.1_g000003 Rmu_sc0013102.1_g000013 Rmu_sc0013160.1_g000006 Rmu_sc0014846.1_g000004 Rmu_sc0017037.1_g000003 Rmu_sc0018203.1_g000001 Rmu_sc0018204.1_g000001 Rmu_sc0018348.1_g000001 Rmu_sc0019354.1_g000002 Rmu_sc0021630.1_g000002 Rmu_sc0022987.1_g000002 Rmu_sc0024469.1_g000005 Rmu_sc0033519.1_g000001 Rmu_sc0033519.1_g000002 Rmu_sc0033519.1_g000003 Rmu_sc0042775.1_g000001 Rmu_ssc0000110.1_g000003 Rmu_ssc0000110.1_g000004 Rmu_ssc0000126.1_g000068 Rmu_ssc0000200.1_g000007 Rmu_ssc0000295.1_g000003 Rmu_ssc0000295.1_g000004 Rmu_ssc0000299.1_g000010 Rmu_ssc0000308.1_g000024 Rmu_ssc0000339.1_g000006 Rmu_ssc0000385.1_g000012 Rmu_ssc0000409.1_g000004 Rmu_ssc0000421.1_g000004
rosa_roxburghii Rroxscaffold_156G00440360 Rroxscaffold_166G00440800 Rroxscaffold_1G00039040 Rroxscaffold_1G00039050 Rroxscaffold_1G00073950 Rroxscaffold_2G00091710 Rroxscaffold_2G00120050 Rroxscaffold_2G00122590 Rroxscaffold_3G00219700 Rroxscaffold_3G00264140 Rroxscaffold_4G00290600 Rroxscaffold_4G00323610 Rroxscaffold_4G00328460 Rroxscaffold_5G00343440 Rroxscaffold_5G00343570 Rroxscaffold_5G00378540 Rroxscaffold_5G00385090 Rroxscaffold_7G00169130 Rroxscaffold_7G00216420
rosa_rugosa Rorug01G0065800 Rorug01G0073500 Rorug01G0091700 Rorug01G0096500 Rorug01G0204700.1 Rorug01G0249100 Rorug01G0333800 Rorug01G0333900 Rorug01G0339500 Rorug01G0431300 Rorug02G0085400 Rorug02G0117500 Rorug02G0130900 Rorug02G0178800 Rorug02G0226700 Rorug02G0336300 Rorug02G0338700 Rorug02G0351400 Rorug02G0459900 Rorug03G0187000 Rorug03G0223700 Rorug03G0291300 Rorug03G0291300 Rorug03G0311100 Rorug03G0316900 Rorug03G0346000 Rorug04G0014500 Rorug04G0014600 Rorug04G0124100 Rorug04G0136500 Rorug04G0302000 Rorug04G0338100 Rorug04G0338200 Rorug04G0413100 Rorug05G0182200 Rorug05G0226500 Rorug05G0273300 Rorug05G0292200 Rorug05G0292200 Rorug05G0392500 Rorug05G0394500 Rorug05G0394600 Rorug05G0505600.1 Rorug06G0351400 Rorug06G0393400 Rorug06G0393600 Rorug06G0470000 Rorug07G0063100 Rorug07G0086800 Rorug07G0109200 Rorug07G0236100
rosa_samantha Rh1AG010800 Rh1AG011100 Rh1AG064900 Rh1AG088000 Rh1AG207100 Rh1AG262000 Rh1AG300800 Rh1BG043000 Rh1BG144600 Rh1BG180700 Rh1BG180800 Rh1BG328800 Rh1BG399400 Rh1CG041400 Rh1CG047300 Rh1CG379700 Rh1DG036500 Rh1DG083000 Rh1DG210700 Rh1DG210800 Rh1DG231100 Rh2AG007900 Rh2AG055500 Rh2AG339100 Rh2AG368100 Rh2BG243300 Rh2BG258900 Rh2BG292000 Rh2BG333500 Rh2BG387300 Rh2BG612800 Rh2BG619100 Rh2CG026500 Rh2CG163600 Rh2CG535700 Rh2DG186400 Rh2DG235000 Rh2DG314500 Rh2DG388500 Rh2DG391400 Rh2DG496900 Rh2DG526700 Rh2DG570700 Rh3AG330700 Rh3BG266900 Rh3CG236000 Rh3CG340400 Rh3DG090000 Rh3DG278400 Rh3DG297600 Rh3DG362600 Rh4AG001300 Rh4AG023300 Rh4AG097100 Rh4AG427000 Rh4BG029400 Rh4BG032400 Rh4BG086000 Rh4BG249200 Rh4CG001900 Rh4CG040600 Rh4CG093000 Rh4CG106300 Rh4CG113200 Rh4CG113900 Rh4DG002300 Rh4DG144400 Rh4DG234200 Rh5AG043700 Rh5AG084900 Rh5AG161500 Rh5AG409000 Rh5AG457200 Rh5AG457900 Rh5AG473700 Rh5AG520600 Rh5BG042100 Rh5BG124100 Rh5BG323500 Rh5BG417200 Rh5BG443700 Rh5BG451500 Rh5BG464900 Rh5BG470400 Rh5BG522500 Rh5CG068800 Rh5CG178300 Rh5CG231000 Rh5CG258600 Rh5CG394500 Rh5CG473700 Rh5DG164700 Rh5DG235400 Rh5DG261300 Rh5DG304900 Rh5DG334500 Rh5DG424300 Rh5DG458400 Rh5DG478600 Rh5DG552300 Rh5DG552700 Rh6AG037000 Rh6AG042100 Rh6AG255500 Rh6AG283400 Rh6AG291800 Rh6BG049600 Rh6BG080700 Rh6BG114600 Rh6BG128900 Rh6BG352500 Rh6CG052400 Rh6CG112900 Rh6CG113000 Rh6CG131300 Rh6CG157700 Rh6CG243200 Rh6CG254100 Rh6CG275700 Rh6CG299700 Rh6CG309100 Rh6CG317600 Rh6CG342600 Rh6CG471900 Rh6DG038200 Rh6DG102300 Rh6DG114400 Rh6DG225900 Rh6DG292900 Rh6DG320700 Rh6DG512800 Rh7AG217700 Rh7AG313900 Rh7AG446000 Rh7AG472600 Rh7BG223100 Rh7BG349900 Rh7BG352000 Rh7CG160200 Rh7CG233900 Rh7CG242700 Rh7CG273900 Rh7CG306400 Rh7CG322200 Rh7DG053800 Rh7DG077800 Rh7DG227700 Rh7DG404800
rosa_wichuraiana Rw0G003990 Rw2G022110 Rw2G024890 Rw6G005700 Rw7G008770

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 2 cut(s) 66, 677
AccII CGCG 4 cut(s) 1003, 1461, 1557, 1572
AciI CCGC 7 cut(s) 330, 354, 362, 569, 903, 1557, 1572
AclWI GGATC 7 cut(s) 89, 192, 205, 557, 570, 949, 962
AcoI YGGCCR 1 cut(s) 104
AcsI RAATTY 6 cut(s) 4, 130, 602, 618, 1099, 1156
AcuI CTGAAG 1 cut(s) 1281
AfaI GTAC 2 cut(s) 110, 758
AfiI CCNNNNNNNGG 2 cut(s) 586, 629
AflIII ACRYGT 1 cut(s) 298
AgeI ACCGGT 3 cut(s) 271, 750, 1468
AgsI TTSAA 7 cut(s) 296, 515, 944, 1124, 1161, 1256, 1292
AhdI GACNNNNNGTC 1 cut(s) 1411
AjiI CACGTC 1 cut(s) 1586
AjuI GAANNNNNNNTTGG 4 cut(s) 1004, 1036, 1141, 1173
AleI CACNNNNGTG 1 cut(s) 1229
AluBI AGCT 7 cut(s) 434, 448, 884, 962, 1088, 1259, 1490
AluI AGCT 7 cut(s) 434, 448, 884, 962, 1088, 1259, 1490
Alw21I GWGCWC 2 cut(s) 496, 802
Alw26I GTCTC 4 cut(s) 16, 345, 418, 1054
AlwI GGATC 7 cut(s) 89, 192, 205, 557, 570, 949, 962
Ama87I CYCGRG 1 cut(s) 1518
AoxI GGCC 4 cut(s) 104, 468, 849, 1198
ApeKI GCWGC 2 cut(s) 445, 551
ApoI RAATTY 6 cut(s) 4, 130, 602, 618, 1099, 1156
AsiGI ACCGGT 3 cut(s) 271, 750, 1468
AspLEI GCGC 3 cut(s) 670, 1005, 1461
AspS9I GGNCC 2 cut(s) 47, 1199
AsuHPI GGTGA 3 cut(s) 190, 316, 448
AsuII TTCGAA 1 cut(s) 1302
AvaI CYCGRG 1 cut(s) 1518
AvaII GGWCC 1 cut(s) 47
BaeI ACNNNNGTAYC 2 cut(s) 1490, 1523
BamHI GGATCC 3 cut(s) 197, 562, 954
BbsI GAAGAC 3 cut(s) 618, 1174, 1386
Bbv12I GWGCWC 2 cut(s) 496, 802
BbvI GCAGC 2 cut(s) 457, 538
BccI CCATC 8 cut(s) 151, 157, 925, 1349, 1417, 1447, 1486, 1490
BceAI ACGGC 1 cut(s) 91
BcgI CGANNNNNNTGC 2 cut(s) 377, 411
BcoDI GTCTC 4 cut(s) 16, 345, 418, 1054
BfaI CTAG 3 cut(s) 767, 822, 1089
BfoI RGCGCY 1 cut(s) 671
BisI GCNGC 4 cut(s) 446, 552, 570, 903
BlsI GCNGC 4 cut(s) 447, 553, 571, 904
Bme18I GGWCC 1 cut(s) 47
BmeRI GACNNNNNGTC 1 cut(s) 1411
BmeT110I CYCGRG 1 cut(s) 1518
BmgBI CACGTC 1 cut(s) 1586
BmgT120I GGNCC 2 cut(s) 47, 1199
BmiI GGNNCC 6 cut(s) 199, 564, 578, 956, 1547, 1577
BmsI GCATC 2 cut(s) 489, 794
BpiI GAAGAC 3 cut(s) 618, 1174, 1386
Bpu10I CCTNAGC 1 cut(s) 1491
Bpu14I TTCGAA 1 cut(s) 1302
BpuEI CTTGAG 1 cut(s) 9
Bsa29I ATCGAT 2 cut(s) 929, 1173
BsaI GGTCTC 1 cut(s) 418
BsaJI CCNNGG 6 cut(s) 98, 545, 671, 1534, 1549, 1579
BsaWI WCCGGW 4 cut(s) 271, 750, 1226, 1468
Bsc4I CCNNNNNNNGG 2 cut(s) 586, 629
Bse118I RCCGGY 3 cut(s) 271, 750, 1468
Bse1I ACTGG 1 cut(s) 180
Bse3DI GCAATG 1 cut(s) 393
BseCI ATCGAT 2 cut(s) 929, 1173
BseDI CCNNGG 6 cut(s) 98, 545, 671, 1534, 1549, 1579
BseGI GGATG 1 cut(s) 1478
BseLI CCNNNNNNNGG 2 cut(s) 586, 629
BseMI GCAATG 1 cut(s) 393
BseMII CTCAG 4 cut(s) 27, 488, 1065, 1263
BseNI ACTGG 1 cut(s) 180
BseRI GAGGAG 1 cut(s) 1070
BseXI GCAGC 2 cut(s) 457, 538
BseYI CCCAGC 1 cut(s) 958
Bsh1236I CGCG 4 cut(s) 1003, 1461, 1557, 1572
BshFI GGCC 4 cut(s) 106, 470, 851, 1200
BshTI ACCGGT 3 cut(s) 271, 750, 1468
BshVI ATCGAT 2 cut(s) 929, 1173
BsiHKAI GWGCWC 2 cut(s) 496, 802
BsiHKCI CYCGRG 1 cut(s) 1518
BsiSI CCGG 5 cut(s) 272, 599, 751, 1227, 1469
BslFI GGGAC 3 cut(s) 74, 1130, 1458
BslI CCNNNNNNNGG 2 cut(s) 586, 629
BsmAI GTCTC 4 cut(s) 16, 345, 418, 1054
BsmFI GGGAC 3 cut(s) 74, 1130, 1458
BsnI GGCC 4 cut(s) 106, 470, 851, 1200
Bso31I GGTCTC 1 cut(s) 418
BsoBI CYCGRG 1 cut(s) 1518
Bsp119I TTCGAA 1 cut(s) 1302
Bsp1286I GDGCHC 2 cut(s) 496, 802
Bsp143I GATC 6 cut(s) 94, 197, 562, 694, 954, 1059
BspACI CCGC 7 cut(s) 330, 354, 362, 569, 903, 1557, 1572
BspANI GGCC 4 cut(s) 106, 470, 851, 1200
BspCNI CTCAG 4 cut(s) 26, 487, 1064, 1264
BspDI ATCGAT 2 cut(s) 929, 1173
BspFNI CGCG 4 cut(s) 1003, 1461, 1557, 1572
BspLI GGNNCC 6 cut(s) 199, 564, 578, 956, 1547, 1577
BspPI GGATC 7 cut(s) 89, 192, 205, 557, 570, 949, 962
BspQI GCTCTTC 1 cut(s) 226
BspT104I TTCGAA 1 cut(s) 1302
BspTNI GGTCTC 1 cut(s) 418
BsrDI GCAATG 1 cut(s) 393
BsrFI RCCGGY 3 cut(s) 271, 750, 1468
BsrI ACTGG 1 cut(s) 180
BssAI RCCGGY 3 cut(s) 271, 750, 1468
BssECI CCNNGG 6 cut(s) 98, 545, 671, 1534, 1549, 1579
BssMI GATC 6 cut(s) 94, 197, 562, 694, 954, 1059
BssT1I CCWWGG 2 cut(s) 545, 671
Bst4CI ACNGT 9 cut(s) 102, 280, 682, 1180, 1288, 1409, 1535, 1550, 1580
Bst6I CTCTTC 6 cut(s) 76, 226, 348, 1125, 1371, 1519
BstBI TTCGAA 1 cut(s) 1302
BstC8I GCNNGC 3 cut(s) 217, 1198, 1312
BstDEI CTNAG 6 cut(s) 13, 474, 522, 1051, 1272, 1491
BstDSI CCRYGG 4 cut(s) 98, 1534, 1549, 1579
BstEII GGTNACC 2 cut(s) 727, 1529
BstF5I GGATG 1 cut(s) 1478
BstFNI CGCG 4 cut(s) 1003, 1461, 1557, 1572
BstH2I RGCGCY 1 cut(s) 671
BstHHI GCGC 3 cut(s) 670, 1005, 1461
BstKTI GATC 6 cut(s) 97, 200, 565, 697, 957, 1062
BstMAI GTCTC 4 cut(s) 16, 345, 418, 1054
BstMBI GATC 6 cut(s) 94, 197, 562, 694, 954, 1059
BstMWI GCNNNNNNNGC 2 cut(s) 806, 988
BstNSI RCATGY 2 cut(s) 302, 644
BstPI GGTNACC 2 cut(s) 727, 1529
BstUI CGCG 4 cut(s) 1003, 1461, 1557, 1572
BstV1I GCAGC 2 cut(s) 457, 538
BstV2I GAAGAC 3 cut(s) 618, 1174, 1386
BstX2I RGATCY 3 cut(s) 197, 562, 954
BstXI CCANNNNNNTGG 2 cut(s) 859, 1102
BstYI RGATCY 3 cut(s) 197, 562, 954
Bsu15I ATCGAT 2 cut(s) 929, 1173
BsuRI GGCC 4 cut(s) 106, 470, 851, 1200
BsuTUI ATCGAT 2 cut(s) 929, 1173
BtgI CCRYGG 4 cut(s) 98, 1534, 1549, 1579
BtrI CACGTC 1 cut(s) 1586
BtsCI GGATG 1 cut(s) 1478
BtsIMutI CAGTG 4 cut(s) 159, 173, 276, 1414
Cac8I GCNNGC 3 cut(s) 217, 1198, 1312
CfoI GCGC 3 cut(s) 670, 1005, 1461
Cfr10I RCCGGY 3 cut(s) 271, 750, 1468
Cfr13I GGNCC 2 cut(s) 47, 1199
ClaI ATCGAT 2 cut(s) 929, 1173
CseI GACGC 4 cut(s) 133, 1494, 1563, 1578
Csp6I GTAC 2 cut(s) 109, 757
CspAI ACCGGT 3 cut(s) 271, 750, 1468
CviAII CATG 4 cut(s) 299, 607, 641, 1028
CviQI GTAC 2 cut(s) 109, 757
DdeI CTNAG 6 cut(s) 13, 474, 522, 1051, 1272, 1491
DpnI GATC 6 cut(s) 96, 199, 564, 696, 956, 1061
DpnII GATC 6 cut(s) 94, 197, 562, 694, 954, 1059
DriI GACNNNNNGTC 1 cut(s) 1411
EaeI YGGCCR 1 cut(s) 104
Eam1104I CTCTTC 6 cut(s) 76, 226, 348, 1125, 1371, 1519
Eam1105I GACNNNNNGTC 1 cut(s) 1411
EarI CTCTTC 6 cut(s) 76, 226, 348, 1125, 1371, 1519
EciI GGCGGA 1 cut(s) 343
Eco130I CCWWGG 2 cut(s) 545, 671
Eco31I GGTCTC 1 cut(s) 418
Eco47I GGWCC 1 cut(s) 47
Eco57I CTGAAG 1 cut(s) 1281
Eco88I CYCGRG 1 cut(s) 1518
Eco91I GGTNACC 2 cut(s) 727, 1529
EcoO65I GGTNACC 2 cut(s) 727, 1529
EcoRI GAATTC 4 cut(s) 4, 130, 602, 618
EcoT14I CCWWGG 2 cut(s) 545, 671
ErhI CCWWGG 2 cut(s) 545, 671
FaeI CATG 4 cut(s) 302, 610, 644, 1031
FalI AAGNNNNNCTT 4 cut(s) 327, 359, 617, 649
FaqI GGGAC 3 cut(s) 74, 1130, 1458
FatI CATG 4 cut(s) 298, 606, 640, 1027
FauI CCCGC 1 cut(s) 1565
FblI GTMKAC 2 cut(s) 66, 677
Fnu4HI GCNGC 4 cut(s) 446, 552, 570, 903
FokI GGATG 1 cut(s) 1465
Fsp4HI GCNGC 4 cut(s) 446, 552, 570, 903
FspBI CTAG 3 cut(s) 767, 822, 1089
GlaI GCGC 3 cut(s) 669, 1004, 1460
GluI GCNGC 4 cut(s) 446, 552, 570, 903
GsaI CCCAGC 1 cut(s) 962
HaeII RGCGCY 1 cut(s) 671
HaeIII GGCC 4 cut(s) 106, 470, 851, 1200
HapII CCGG 5 cut(s) 272, 599, 751, 1227, 1469
HgaI GACGC 4 cut(s) 133, 1494, 1563, 1578
HhaI GCGC 3 cut(s) 670, 1005, 1461
Hin1II CATG 4 cut(s) 302, 610, 644, 1031
Hin6I GCGC 3 cut(s) 668, 1003, 1459
HinP1I GCGC 3 cut(s) 668, 1003, 1459
HincII GTYRAC 1 cut(s) 82
HindII GTYRAC 1 cut(s) 82
HindIII AAGCTT 1 cut(s) 882
HpaII CCGG 5 cut(s) 272, 599, 751, 1227, 1469
HphI GGTGA 3 cut(s) 190, 316, 448
Hpy166II GTNNAC 8 cut(s) 67, 82, 123, 456, 678, 1553, 1568, 1583
Hpy188I TCNGA 5 cut(s) 47, 1054, 1375, 1405, 1417
Hpy188III TCNNGA 7 cut(s) 230, 238, 383, 512, 701, 1352, 1443
Hpy8I GTNNAC 8 cut(s) 67, 82, 123, 456, 678, 1553, 1568, 1583
Hpy99I CGWCG 1 cut(s) 389
HpyAV CCTTC 3 cut(s) 147, 174, 843
HpyCH4III ACNGT 9 cut(s) 102, 280, 682, 1180, 1288, 1409, 1535, 1550, 1580
HpyCH4IV ACGT 2 cut(s) 1450, 1585
HpyCH4V TGCA 6 cut(s) 502, 554, 785, 1224, 1284, 1310
HpyF10VI GCNNNNNNNGC 2 cut(s) 806, 988
HpyF3I CTNAG 6 cut(s) 13, 474, 522, 1051, 1272, 1491
HpySE526I ACGT 2 cut(s) 1450, 1585
Hsp92II CATG 4 cut(s) 302, 610, 644, 1031
HspAI GCGC 3 cut(s) 668, 1003, 1459
Kzo9I GATC 6 cut(s) 94, 197, 562, 694, 954, 1059
LguI GCTCTTC 1 cut(s) 226
LmnI GCTCC 4 cut(s) 403, 431, 491, 805
Lsp1109I GCAGC 2 cut(s) 457, 538
LweI GCATC 2 cut(s) 489, 794
MaeI CTAG 3 cut(s) 767, 822, 1089
MaeII ACGT 2 cut(s) 1450, 1585
MaeIII GTNAC 5 cut(s) 274, 727, 1036, 1267, 1529
MalI GATC 6 cut(s) 96, 199, 564, 696, 956, 1061
MboI GATC 6 cut(s) 94, 197, 562, 694, 954, 1059
MfeI CAATTG 4 cut(s) 192, 291, 1137, 1386
MflI RGATCY 3 cut(s) 197, 562, 954
MhlI GDGCHC 2 cut(s) 496, 802
MlyI GAGTC 6 cut(s) 62, 109, 398, 1376, 1409, 1429
MmeI TCCRAC 1 cut(s) 25
MseI TTAA 5 cut(s) 20, 405, 735, 936, 1473
MslI CAYNNNNRTG 3 cut(s) 645, 1229, 1374
MspA1I CMGCKG 1 cut(s) 569
MspI CCGG 5 cut(s) 272, 599, 751, 1227, 1469
MunI CAATTG 4 cut(s) 192, 291, 1137, 1386
MvnI CGCG 4 cut(s) 1003, 1461, 1557, 1572
MwoI GCNNNNNNNGC 2 cut(s) 806, 988
NdeII GATC 6 cut(s) 94, 197, 562, 694, 954, 1059
NlaIII CATG 4 cut(s) 302, 610, 644, 1031
NlaIV GGNNCC 6 cut(s) 199, 564, 578, 956, 1547, 1577
NmuCI GTSAC 1 cut(s) 274
NspI RCATGY 2 cut(s) 302, 644
NspV TTCGAA 1 cut(s) 1302
OliI CACNNNNGTG 1 cut(s) 1229
PaeR7I CTCGAG 1 cut(s) 1518
PciI ACATGT 1 cut(s) 298
PciSI GCTCTTC 1 cut(s) 226
PcsI WCGNNNNNNNCGW 3 cut(s) 260, 1561, 1576
PfeI GAWTC 4 cut(s) 241, 260, 1292, 1361
PflFI GACNNNGTC 1 cut(s) 1449
PinAI ACCGGT 3 cut(s) 271, 750, 1468
PkrI GCNGC 4 cut(s) 447, 553, 571, 904
PleI GAGTC 6 cut(s) 62, 109, 397, 1376, 1408, 1429
PpsI GAGTC 6 cut(s) 62, 109, 397, 1376, 1408, 1429
PscI ACATGT 1 cut(s) 298
PspEI GGTNACC 2 cut(s) 727, 1529
PspFI CCCAGC 1 cut(s) 958
PspN4I GGNNCC 6 cut(s) 199, 564, 578, 956, 1547, 1577
PspPI GGNCC 2 cut(s) 47, 1199
PspXI VCTCGAGB 1 cut(s) 1518
PsuI RGATCY 3 cut(s) 197, 562, 954
PsyI GACNNNGTC 1 cut(s) 1449
RsaI GTAC 2 cut(s) 110, 758
RsaNI GTAC 2 cut(s) 109, 757
RseI CAYNNNNRTG 3 cut(s) 645, 1229, 1374
SapI GCTCTTC 1 cut(s) 226
SaqAI TTAA 5 cut(s) 20, 405, 735, 936, 1473
SatI GCNGC 4 cut(s) 446, 552, 570, 903
Sau3AI GATC 6 cut(s) 94, 197, 562, 694, 954, 1059
Sau96I GGNCC 2 cut(s) 47, 1199
SchI GAGTC 6 cut(s) 62, 109, 398, 1376, 1409, 1429
SduI GDGCHC 2 cut(s) 496, 802
SfaNI GCATC 2 cut(s) 489, 794
Sfr274I CTCGAG 1 cut(s) 1518
SfuI TTCGAA 1 cut(s) 1302
SinI GGWCC 1 cut(s) 47
SlaI CTCGAG 1 cut(s) 1518
SmiMI CAYNNNNRTG 3 cut(s) 645, 1229, 1374
SmlI CTYRAG 2 cut(s) 24, 1518
SmoI CTYRAG 2 cut(s) 24, 1518
SsiI CCGC 7 cut(s) 330, 354, 362, 569, 903, 1557, 1572
SspMI CTAG 3 cut(s) 767, 822, 1089
StyI CCWWGG 2 cut(s) 545, 671
TaaI ACNGT 9 cut(s) 102, 280, 682, 1180, 1288, 1409, 1535, 1550, 1580
TaiI ACGT 2 cut(s) 1453, 1588
TaqI TCGA 8 cut(s) 263, 282, 384, 929, 1173, 1185, 1302, 1519
TatI WGTACW 1 cut(s) 756
TauI GCSGC 2 cut(s) 572, 905
TfiI GAWTC 4 cut(s) 241, 260, 1292, 1361
Tru1I TTAA 5 cut(s) 20, 405, 735, 936, 1473
Tru9I TTAA 5 cut(s) 20, 405, 735, 936, 1473
TscAI CASTG 4 cut(s) 159, 180, 283, 1414
TseFI GTSAC 1 cut(s) 274
TseI GCWGC 2 cut(s) 445, 551
Tsp45I GTSAC 1 cut(s) 274
TspDTI ATGAA 6 cut(s) 17, 595, 1025, 1044, 1358, 1392
TspGWI ACGGA 1 cut(s) 630
TspRI CASTG 4 cut(s) 159, 180, 283, 1414
Tth111I GACNNNGTC 1 cut(s) 1449
VpaK11BI GGWCC 1 cut(s) 47
XapI RAATTY 6 cut(s) 4, 130, 602, 618, 1099, 1156
XceI RCATGY 2 cut(s) 302, 644
XcmI CCANNNNNNNNNTGG 1 cut(s) 859
XhoI CTCGAG 1 cut(s) 1518
XmiI GTMKAC 2 cut(s) 66, 677
XspI CTAG 3 cut(s) 767, 822, 1089
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.