Rmu_sc0003267.1_g000040

Domain of unknown function (DUF4283)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0003267.1
OG0000044
Physical Location & Seq
Reverse (-)
184898 .. 187794
2897 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0003267.1_g000040.1.cds

Sequence Viewer

Length: 1434 bp
atggtctgcaagatctgcgccagaaacttagtctcttttggggcaacatcggtcaatggaagatcattccaatgggtcgtggttactagtgccattgctttgaagcctggaacattgagattcatgcgctgggttcctaatttcccccctgcatgtcagtgtaatacaaatgcccaagtttgggtgaggttatgggatcttggactcgagtactgggaagcccagacactctttgaaatcaccaatggaattggtgtccccatcaggattgatgcgaacacacttgatcgaaagtttggtctatatgcaagggttttggtggatattgacctttccacagaacccccattggaaattatggtagaacgtgagggtggtggaaccctagttttggaagttgaatatgaacatctgcccttatcatgctctcactgtgcaaaggaagtgaaggagaatgacattaattcaaggagggggcgtaaacgaagtcgacgtgcaaagaagagtaatgtttttcaagtctacgttgctaagaaagtggtggaggtggttcaacagattggagacccctcctctgctgatcctaatgcatcatctgggatttcactgatagtacataatgacatggttgagacttcacaggttccagagacacaactttctcctttggctgcaccttctccaagagtgcattcaccaattctaggacctccgtctgtgggaggtttggcaggtattgtagttgtacctactgttaatgcttttcaggccctcgcaaatgagtttgagactgatagcgagggagagaccacagagatacaatgtagtgatgatgtgcaacgtggagcggatgttatcattgaagaggatactatttccaaaactccttcccctaaggtgttaactaaagatatgactcagtcagaatatgatgttcataaagctaagttctgttggggtgatttggaaaatgaagaacctcttggtaatcatacatatgctcaggatgagttaagtcctctgtgttcctggtttgatgagggtgaagcaactgtggaagatgagaatcttcttaagtctcttccaaaatctcaaaataaaaaattgaagtccaaaagagattcacgagacccttaccctacccgcaatcggacgcctgttgtgcgtcttgatctttggttcaaccggctctgcttaatcatgcttatgttttggttgtctttccgttttgttatttcttctaaagggtattggcttcatgtcccccccccttcggaaattttgaagaagaaggtgggaagacctcttgggagcaagaacaagaaccctcacccacaaaagaaggtgagtgtgactccattgcgcctcacttaccttactgttgctgttgttcaggaggttactcctaaggataagggcaaagggaagctctaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4283 zf-CCHC_4

Protein Analysis

477

Amino Acids

53.29

Weight (kDa)

7.95

Isoelectric Point (pI)

42.25

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000044)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G07760 AT5G28823
fragaria_vesca FvH4_1g13572 FvH4_2g03281 FvH4_2g04691 FvH4_2g08332 FvH4_2g08333 FvH4_2g15313 FvH4_2g26101 FvH4_2g29541 FvH4_3g06911 FvH4_3g34351 FvH4_3g43733 FvH4_4g02432 FvH4_4g05601 FvH4_4g08213 FvH4_4g09961 FvH4_4g10131 FvH4_4g20001 FvH4_4g20002 FvH4_5g01051 FvH4_5g01401 FvH4_5g27943 FvH4_6g09220 FvH4_6g17383 FvH4_6g35491 FvH4_6g46421 FvH4_7g04151 FvH4_7g13962 FvH4_7g18611 FvH4_7g19491 FvH4_7g19511 FvH4_7g26562
malus_domestica MD06G1221600.v1.1
pyrus_communis pycom10g21150
rosa_chinensis RchiOBHm_Chr1g0337571 RchiOBHm_Chr2g0168771 RchiOBHm_Chr3g0453631 RchiOBHm_Chr6g0278581
rosa_laevigata RLG00000001899 RLG00000001925 RLG00000002026 RLG00000003410 RLG00000003767 RLG00000004304 RLG00000004473 RLG00000004677 RLG00000006856 RLG00000007994 RLG00000009888 RLG00000011627 RLG00000012174 RLG00000012217 RLG00000013118 RLG00000013736 RLG00000014194 RLG00000014251 RLG00000015011 RLG00000015057 RLG00000015235 RLG00000017416 RLG00000018052 RLG00000018537 RLG00000019968 RLG00000020096 RLG00000020263 RLG00000022606 RLG00000023119 RLG00000028111 RLG00000029686 RLG00000030126 RLG00000031124 RLG00000031236 RLG00000032766 RLG00000033171 RLG00000033548 RLG00000033987 RLG00000034062 RLG00000035115 RLG00000035863
rosa_multiflora Rmu_co8036712.1_g000001 Rmu_co8080248.1_g000001 Rmu_co8208334.1_g000001 Rmu_co8253451.1_g000001 Rmu_co8393241.1_g000001 Rmu_co8522225.1_g000005 Rmu_sc0000060.1_g000030 Rmu_sc0000060.1_g000031 Rmu_sc0000060.1_g000032 Rmu_sc0000090.1_g000008 Rmu_sc0000149.1_g000051 Rmu_sc0000149.1_g000058 Rmu_sc0000309.1_g000050 Rmu_sc0000370.1_g000022 Rmu_sc0000370.1_g000023 Rmu_sc0000370.1_g000024 Rmu_sc0000418.1_g000018 Rmu_sc0000427.1_g000014 Rmu_sc0000427.1_g000015 Rmu_sc0000434.1_g000008 Rmu_sc0000487.1_g000038 Rmu_sc0000487.1_g000039 Rmu_sc0000569.1_g000029 Rmu_sc0000580.1_g000097 Rmu_sc0000595.1_g000068 Rmu_sc0000607.1_g000027 Rmu_sc0000738.1_g000004 Rmu_sc0000758.1_g000001 Rmu_sc0000758.1_g000002 Rmu_sc0000870.1_g000019 Rmu_sc0000924.1_g000040 Rmu_sc0000924.1_g000041 Rmu_sc0000999.1_g000037 Rmu_sc0001001.1_g000001 Rmu_sc0001010.1_g000080 Rmu_sc0001075.1_g000041 Rmu_sc0001097.1_g000016 Rmu_sc0001173.1_g000020 Rmu_sc0001258.1_g000010 Rmu_sc0001425.1_g000031 Rmu_sc0001493.1_g000020 Rmu_sc0001493.1_g000021 Rmu_sc0001644.1_g000024 Rmu_sc0001648.1_g000039 Rmu_sc0001662.1_g000002 Rmu_sc0001849.1_g000046 Rmu_sc0001851.1_g000038 Rmu_sc0001861.1_g000006 Rmu_sc0001899.1_g000008 Rmu_sc0002231.1_g000023 Rmu_sc0002393.1_g000012 Rmu_sc0002515.1_g000010 Rmu_sc0002551.1_g000013 Rmu_sc0002680.1_g000029 Rmu_sc0002700.1_g000030 Rmu_sc0002700.1_g000031 Rmu_sc0002709.1_g000035 Rmu_sc0002779.1_g000017 Rmu_sc0003267.1_g000040 Rmu_sc0003306.1_g000009 Rmu_sc0003338.1_g000014 Rmu_sc0003522.1_g000038 Rmu_sc0003522.1_g000039 Rmu_sc0003653.1_g000031 Rmu_sc0003901.1_g000003 Rmu_sc0003920.1_g000009 Rmu_sc0004014.1_g000009 Rmu_sc0004016.1_g000013 Rmu_sc0004031.1_g000002 Rmu_sc0004106.1_g000001 Rmu_sc0004432.1_g000004 Rmu_sc0004481.1_g000020 Rmu_sc0004874.1_g000005 Rmu_sc0004928.1_g000005 Rmu_sc0005065.1_g000053 Rmu_sc0005091.1_g000005 Rmu_sc0005217.1_g000015 Rmu_sc0005242.1_g000002 Rmu_sc0005300.1_g000011 Rmu_sc0005400.1_g000004 Rmu_sc0005486.1_g000007 Rmu_sc0005527.1_g000015 Rmu_sc0006059.1_g000021 Rmu_sc0006087.1_g000004 Rmu_sc0006184.1_g000006 Rmu_sc0006184.1_g000007 Rmu_sc0006578.1_g000006 Rmu_sc0006730.1_g000010 Rmu_sc0006736.1_g000030 Rmu_sc0006736.1_g000033 Rmu_sc0007333.1_g000018 Rmu_sc0007856.1_g000010 Rmu_sc0008231.1_g000003 Rmu_sc0009862.1_g000012 Rmu_sc0010547.1_g000001 Rmu_sc0010547.1_g000003 Rmu_sc0010632.1_g000012 Rmu_sc0010747.1_g000008 Rmu_sc0011075.1_g000009 Rmu_sc0011565.1_g000004 Rmu_sc0011641.1_g000003 Rmu_sc0013102.1_g000013 Rmu_sc0013160.1_g000006 Rmu_sc0014846.1_g000004 Rmu_sc0017037.1_g000003 Rmu_sc0018203.1_g000001 Rmu_sc0018204.1_g000001 Rmu_sc0018348.1_g000001 Rmu_sc0019354.1_g000002 Rmu_sc0021630.1_g000002 Rmu_sc0022987.1_g000002 Rmu_sc0024469.1_g000005 Rmu_sc0033519.1_g000001 Rmu_sc0033519.1_g000002 Rmu_sc0033519.1_g000003 Rmu_sc0042775.1_g000001 Rmu_ssc0000110.1_g000003 Rmu_ssc0000110.1_g000004 Rmu_ssc0000126.1_g000068 Rmu_ssc0000200.1_g000007 Rmu_ssc0000295.1_g000003 Rmu_ssc0000295.1_g000004 Rmu_ssc0000299.1_g000010 Rmu_ssc0000308.1_g000024 Rmu_ssc0000339.1_g000006 Rmu_ssc0000385.1_g000012 Rmu_ssc0000409.1_g000004 Rmu_ssc0000421.1_g000004
rosa_roxburghii Rroxscaffold_156G00440360 Rroxscaffold_166G00440800 Rroxscaffold_1G00039040 Rroxscaffold_1G00039050 Rroxscaffold_1G00073950 Rroxscaffold_2G00091710 Rroxscaffold_2G00120050 Rroxscaffold_2G00122590 Rroxscaffold_3G00219700 Rroxscaffold_3G00264140 Rroxscaffold_4G00290600 Rroxscaffold_4G00323610 Rroxscaffold_4G00328460 Rroxscaffold_5G00343440 Rroxscaffold_5G00343570 Rroxscaffold_5G00378540 Rroxscaffold_5G00385090 Rroxscaffold_7G00169130 Rroxscaffold_7G00216420
rosa_rugosa Rorug01G0065800 Rorug01G0073500 Rorug01G0091700 Rorug01G0096500 Rorug01G0204700.1 Rorug01G0249100 Rorug01G0333800 Rorug01G0333900 Rorug01G0339500 Rorug01G0431300 Rorug02G0085400 Rorug02G0117500 Rorug02G0130900 Rorug02G0178800 Rorug02G0226700 Rorug02G0336300 Rorug02G0338700 Rorug02G0351400 Rorug02G0459900 Rorug03G0187000 Rorug03G0223700 Rorug03G0291300 Rorug03G0291300 Rorug03G0311100 Rorug03G0316900 Rorug03G0346000 Rorug04G0014500 Rorug04G0014600 Rorug04G0124100 Rorug04G0136500 Rorug04G0302000 Rorug04G0338100 Rorug04G0338200 Rorug04G0413100 Rorug05G0182200 Rorug05G0226500 Rorug05G0273300 Rorug05G0292200 Rorug05G0292200 Rorug05G0392500 Rorug05G0394500 Rorug05G0394600 Rorug05G0505600.1 Rorug06G0351400 Rorug06G0393400 Rorug06G0393600 Rorug06G0470000 Rorug07G0063100 Rorug07G0086800 Rorug07G0109200 Rorug07G0236100
rosa_samantha Rh1AG010800 Rh1AG011100 Rh1AG064900 Rh1AG088000 Rh1AG207100 Rh1AG262000 Rh1AG300800 Rh1BG043000 Rh1BG144600 Rh1BG180700 Rh1BG180800 Rh1BG328800 Rh1BG399400 Rh1CG041400 Rh1CG047300 Rh1CG379700 Rh1DG036500 Rh1DG083000 Rh1DG210700 Rh1DG210800 Rh1DG231100 Rh2AG007900 Rh2AG055500 Rh2AG339100 Rh2AG368100 Rh2BG243300 Rh2BG258900 Rh2BG292000 Rh2BG333500 Rh2BG387300 Rh2BG612800 Rh2BG619100 Rh2CG026500 Rh2CG163600 Rh2CG535700 Rh2DG186400 Rh2DG235000 Rh2DG314500 Rh2DG388500 Rh2DG391400 Rh2DG496900 Rh2DG526700 Rh2DG570700 Rh3AG330700 Rh3BG266900 Rh3CG236000 Rh3CG340400 Rh3DG090000 Rh3DG278400 Rh3DG297600 Rh3DG362600 Rh4AG001300 Rh4AG023300 Rh4AG097100 Rh4AG427000 Rh4BG029400 Rh4BG032400 Rh4BG086000 Rh4BG249200 Rh4CG001900 Rh4CG040600 Rh4CG093000 Rh4CG106300 Rh4CG113200 Rh4CG113900 Rh4DG002300 Rh4DG144400 Rh4DG234200 Rh5AG043700 Rh5AG084900 Rh5AG161500 Rh5AG409000 Rh5AG457200 Rh5AG457900 Rh5AG473700 Rh5AG520600 Rh5BG042100 Rh5BG124100 Rh5BG323500 Rh5BG417200 Rh5BG443700 Rh5BG451500 Rh5BG464900 Rh5BG470400 Rh5BG522500 Rh5CG068800 Rh5CG178300 Rh5CG231000 Rh5CG258600 Rh5CG394500 Rh5CG473700 Rh5DG164700 Rh5DG235400 Rh5DG261300 Rh5DG304900 Rh5DG334500 Rh5DG424300 Rh5DG458400 Rh5DG478600 Rh5DG552300 Rh5DG552700 Rh6AG037000 Rh6AG042100 Rh6AG255500 Rh6AG283400 Rh6AG291800 Rh6BG049600 Rh6BG080700 Rh6BG114600 Rh6BG128900 Rh6BG352500 Rh6CG052400 Rh6CG112900 Rh6CG113000 Rh6CG131300 Rh6CG157700 Rh6CG243200 Rh6CG254100 Rh6CG275700 Rh6CG299700 Rh6CG309100 Rh6CG317600 Rh6CG342600 Rh6CG471900 Rh6DG038200 Rh6DG102300 Rh6DG114400 Rh6DG225900 Rh6DG292900 Rh6DG320700 Rh6DG512800 Rh7AG217700 Rh7AG313900 Rh7AG446000 Rh7AG472600 Rh7BG223100 Rh7BG349900 Rh7BG352000 Rh7CG160200 Rh7CG233900 Rh7CG242700 Rh7CG273900 Rh7CG306400 Rh7CG322200 Rh7DG053800 Rh7DG077800 Rh7DG227700 Rh7DG404800
rosa_wichuraiana Rw0G003990 Rw2G022110 Rw2G024890 Rw6G005700 Rw7G008770

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 722
AccBSI CCGCTC 1 cut(s) 848
AccI GTMKAC 2 cut(s) 490, 522
AciI CCGC 2 cut(s) 848, 1144
AclWI GGATC 2 cut(s) 204, 575
AcsI RAATTY 1 cut(s) 1278
AcyI GRCGYC 1 cut(s) 1154
AfaI GTAC 3 cut(s) 212, 615, 747
AfiI CCNNNNNNNGG 7 cut(s) 180, 181, 391, 704, 719, 1149, 1273
AflII CTTAAG 1 cut(s) 1073
AhlI ACTAGT 1 cut(s) 86
AjiI CACGTC 1 cut(s) 494
AjnI CCWGG 2 cut(s) 106, 1028
AjuI GAANNNNNNNTTGG 4 cut(s) 676, 708, 966, 998
AluBI AGCT 2 cut(s) 944, 1429
AluI AGCT 2 cut(s) 944, 1429
Alw26I GTCTC 8 cut(s) 37, 558, 626, 644, 782, 800, 1083, 1122
AlwI GGATC 2 cut(s) 204, 575
Ama87I CYCGRG 1 cut(s) 206
AoxI GGCC 1 cut(s) 768
ApeKI GCWGC 1 cut(s) 671
ApoI RAATTY 1 cut(s) 1278
ArsI GACNNNNNNTTYG 2 cut(s) 283, 315
AseI ATTAAT 1 cut(s) 462
AspLEI GCGC 3 cut(s) 20, 129, 1365
AspS9I GGNCC 2 cut(s) 707, 769
AsuHPI GGTGA 7 cut(s) 196, 232, 687, 971, 1055, 1322, 1357
AvaI CYCGRG 1 cut(s) 206
AvaII GGWCC 1 cut(s) 707
AxyI CCTNAGG 2 cut(s) 894, 1407
BauI CACGAG 1 cut(s) 1125
BbsI GAAGAC 1 cut(s) 1306
BbvI GCAGC 1 cut(s) 658
BccI CCATC 1 cut(s) 269
BciT130I CCWGG 2 cut(s) 108, 1030
BciVI GTATCC 1 cut(s) 862
BcoDI GTCTC 8 cut(s) 37, 558, 626, 644, 782, 800, 1083, 1122
BcuI ACTAGT 1 cut(s) 86
BfaI CTAG 3 cut(s) 87, 386, 704
BfrI CTTAAG 1 cut(s) 1073
BfuAI ACCTGC 1 cut(s) 722
BfuI GTATCC 1 cut(s) 862
BglII AGATCT 1 cut(s) 12
BisI GCNGC 1 cut(s) 672
BlsI GCNGC 1 cut(s) 673
BmcAI AGTACT 1 cut(s) 212
Bme1390I CCNGG 2 cut(s) 108, 1030
Bme18I GGWCC 1 cut(s) 707
BmeT110I CYCGRG 1 cut(s) 206
BmgBI CACGTC 1 cut(s) 494
BmgT120I GGNCC 2 cut(s) 707, 769
BmiI GGNNCC 3 cut(s) 135, 382, 645
BmrFI CCNGG 2 cut(s) 108, 1030
BmrI ACTGGG 1 cut(s) 223
BmsI GCATC 2 cut(s) 262, 599
BmuI ACTGGG 1 cut(s) 223
BoxI GACNNNNGTC 1 cut(s) 712
BpiI GAAGAC 1 cut(s) 1306
BplI GAGNNNNNCTC 2 cut(s) 1339, 1371
Bpu10I CCTNAGC 1 cut(s) 1002
BsaBI GATNNNNATC 1 cut(s) 1065
BsaHI GRCGYC 1 cut(s) 1154
BsaI GGTCTC 3 cut(s) 558, 800, 1122
BsaXI ACNNNNNCTCC 4 cut(s) 463, 493, 837, 867
Bsc4I CCNNNNNNNGG 7 cut(s) 180, 181, 391, 704, 719, 1149, 1273
Bse118I RCCGGY 1 cut(s) 1185
Bse1I ACTGG 1 cut(s) 218
Bse21I CCTNAGG 2 cut(s) 894, 1407
Bse3DI GCAATG 2 cut(s) 93, 1358
Bse8I GATNNNNATC 1 cut(s) 1065
BseBI CCWGG 2 cut(s) 108, 1030
BseGI GGATG 2 cut(s) 856, 1012
BseJI GATNNNNATC 1 cut(s) 1065
BseLI CCNNNNNNNGG 7 cut(s) 180, 181, 391, 704, 719, 1149, 1273
BseMI GCAATG 2 cut(s) 93, 1358
BseMII CTCAG 2 cut(s) 932, 1016
BseNI ACTGG 1 cut(s) 218
BseRI GAGGAG 1 cut(s) 562
BseXI GCAGC 1 cut(s) 658
BseYI CCCAGC 1 cut(s) 129
BsgI GTGCAG 1 cut(s) 657
BshFI GGCC 1 cut(s) 770
BsiHKCI CYCGRG 1 cut(s) 206
BsiSI CCGG 1 cut(s) 1186
BslFI GGGAC 2 cut(s) 242, 1247
BslI CCNNNNNNNGG 7 cut(s) 180, 181, 391, 704, 719, 1149, 1273
BsmAI GTCTC 8 cut(s) 37, 558, 626, 644, 782, 800, 1083, 1122
BsmFI GGGAC 2 cut(s) 242, 1247
BsmI GAATGC 1 cut(s) 691
BsnI GGCC 1 cut(s) 770
Bso31I GGTCTC 3 cut(s) 558, 800, 1122
BsoBI CYCGRG 1 cut(s) 206
Bsp143I GATC 6 cut(s) 12, 62, 196, 286, 580, 1171
BspACI CCGC 2 cut(s) 848, 1144
BspANI GGCC 1 cut(s) 770
BspCNI CTCAG 2 cut(s) 931, 1015
BspLI GGNNCC 3 cut(s) 135, 382, 645
BspMI ACCTGC 1 cut(s) 722
BspPI GGATC 2 cut(s) 204, 575
BspTI CTTAAG 1 cut(s) 1073
BspTNI GGTCTC 3 cut(s) 558, 800, 1122
BsrBI CCGCTC 1 cut(s) 848
BsrDI GCAATG 2 cut(s) 93, 1358
BsrFI RCCGGY 1 cut(s) 1185
BsrI ACTGG 1 cut(s) 218
BssAI RCCGGY 1 cut(s) 1185
BssMI GATC 6 cut(s) 12, 62, 196, 286, 580, 1171
BssNI GRCGYC 1 cut(s) 1154
BssSI CACGAG 1 cut(s) 1125
Bst2BI CACGAG 1 cut(s) 1125
Bst2UI CCWGG 2 cut(s) 108, 1030
Bst4CI ACNGT 4 cut(s) 434, 754, 1054, 1381
Bst6I CTCTTC 3 cut(s) 497, 858, 1086
BstACI GRCGYC 1 cut(s) 1154
BstAFI CTTAAG 1 cut(s) 1073
BstAPI GCANNNNNTGC 1 cut(s) 15
BstDEI CTNAG 7 cut(s) 28, 531, 894, 918, 945, 1002, 1407
BstF5I GGATG 2 cut(s) 856, 1012
BstHHI GCGC 3 cut(s) 20, 129, 1365
BstKTI GATC 6 cut(s) 15, 65, 199, 289, 583, 1174
BstMAI GTCTC 8 cut(s) 37, 558, 626, 644, 782, 800, 1083, 1122
BstMBI GATC 6 cut(s) 12, 62, 196, 286, 580, 1171
BstMWI GCNNNNNNNGC 3 cut(s) 15, 767, 1162
BstNI CCWGG 2 cut(s) 108, 1030
BstNSI RCATGY 1 cut(s) 156
BstPAI GACNNNNGTC 1 cut(s) 712
BstSCI CCNGG 2 cut(s) 106, 1028
BstV1I GCAGC 1 cut(s) 658
BstV2I GAAGAC 1 cut(s) 1306
BstX2I RGATCY 2 cut(s) 12, 196
BstYI RGATCY 2 cut(s) 12, 196
Bsu36I CCTNAGG 2 cut(s) 894, 1407
BsuI GTATCC 1 cut(s) 862
BsuRI GGCC 1 cut(s) 770
BtrI CACGTC 1 cut(s) 494
BtsCI GGATG 2 cut(s) 856, 1012
BtsIMutI CAGTG 3 cut(s) 164, 430, 605
BveI ACCTGC 1 cut(s) 722
CfoI GCGC 3 cut(s) 20, 129, 1365
Cfr10I RCCGGY 1 cut(s) 1185
Cfr13I GGNCC 2 cut(s) 707, 769
CseI GACGC 2 cut(s) 1154, 1162
Csp6I GTAC 3 cut(s) 211, 614, 746
CviAII CATG 6 cut(s) 124, 153, 423, 625, 1201, 1259
CviJI RGCY 8 cut(s) 106, 221, 671, 770, 944, 1189, 1255, 1429
CviKI_1 RGCY 8 cut(s) 106, 221, 671, 770, 944, 1189, 1255, 1429
CviQI GTAC 3 cut(s) 211, 614, 746
DdeI CTNAG 7 cut(s) 28, 531, 894, 918, 945, 1002, 1407
DpnI GATC 6 cut(s) 14, 64, 198, 288, 582, 1173
DpnII GATC 6 cut(s) 12, 62, 196, 286, 580, 1171
Eam1104I CTCTTC 3 cut(s) 497, 858, 1086
EarI CTCTTC 3 cut(s) 497, 858, 1086
Eco31I GGTCTC 3 cut(s) 558, 800, 1122
Eco47I GGWCC 1 cut(s) 707
Eco81I CCTNAGG 2 cut(s) 894, 1407
Eco88I CYCGRG 1 cut(s) 206
EcoO109I RGGNCCY 2 cut(s) 707, 769
EcoRII CCWGG 2 cut(s) 106, 1028
EcoT22I ATGCAT 1 cut(s) 592
FaeI CATG 6 cut(s) 127, 156, 426, 628, 1204, 1262
FalI AAGNNNNNCTT 2 cut(s) 966, 998
FaqI GGGAC 2 cut(s) 242, 1247
FatI CATG 6 cut(s) 123, 152, 422, 624, 1200, 1258
FauI CCCGC 1 cut(s) 1151
FauNDI CATATG 1 cut(s) 997
FblI GTMKAC 2 cut(s) 490, 522
Fnu4HI GCNGC 1 cut(s) 672
FokI GGATG 2 cut(s) 863, 1019
Fsp4HI GCNGC 1 cut(s) 672
FspBI CTAG 3 cut(s) 87, 386, 704
GlaI GCGC 3 cut(s) 19, 128, 1364
GluI GCNGC 1 cut(s) 672
GsaI CCCAGC 1 cut(s) 133
HaeIII GGCC 1 cut(s) 770
HapII CCGG 1 cut(s) 1186
HgaI GACGC 2 cut(s) 1154, 1162
HhaI GCGC 3 cut(s) 20, 129, 1365
Hin1I GRCGYC 1 cut(s) 1154
Hin1II CATG 6 cut(s) 127, 156, 426, 628, 1204, 1262
Hin6I GCGC 3 cut(s) 18, 127, 1363
HinP1I GCGC 3 cut(s) 18, 127, 1363
HincII GTYRAC 2 cut(s) 491, 903
HindII GTYRAC 2 cut(s) 491, 903
HinfI GANTC 6 cut(s) 120, 204, 916, 1066, 1121, 1354
HpaI GTTAAC 1 cut(s) 903
HpaII CCGG 1 cut(s) 1186
HphI GGTGA 7 cut(s) 196, 232, 687, 971, 1055, 1322, 1357
Hpy166II GTNNAC 4 cut(s) 482, 491, 523, 903
Hpy188I TCNGA 3 cut(s) 925, 1152, 1276
Hpy188III TCNNGA 6 cut(s) 265, 647, 1004, 1125, 1169, 1394
Hpy8I GTNNAC 4 cut(s) 482, 491, 523, 903
Hpy99I CGWCG 1 cut(s) 495
HpyAV CCTTC 6 cut(s) 442, 687, 897, 1281, 1285, 1336
HpyCH4III ACNGT 4 cut(s) 434, 754, 1054, 1381
HpyCH4IV ACGT 4 cut(s) 367, 493, 525, 841
HpyCH4V TGCA 9 cut(s) 9, 152, 308, 437, 497, 590, 674, 691, 838
HpyF10VI GCNNNNNNNGC 3 cut(s) 15, 767, 1162
HpyF3I CTNAG 7 cut(s) 28, 531, 894, 918, 945, 1002, 1407
HpySE526I ACGT 4 cut(s) 367, 493, 525, 841
Hsp92I GRCGYC 1 cut(s) 1154
Hsp92II CATG 6 cut(s) 127, 156, 426, 628, 1204, 1262
HspAI GCGC 3 cut(s) 18, 127, 1363
KspAI GTTAAC 1 cut(s) 903
Kzo9I GATC 6 cut(s) 12, 62, 196, 286, 580, 1171
LmnI GCTCC 2 cut(s) 845, 1311
Lsp1109I GCAGC 1 cut(s) 658
LweI GCATC 2 cut(s) 262, 599
MaeI CTAG 3 cut(s) 87, 386, 704
MaeII ACGT 4 cut(s) 367, 493, 525, 841
MaeIII GTNAC 3 cut(s) 82, 1351, 1399
MalI GATC 6 cut(s) 14, 64, 198, 288, 582, 1173
MbiI CCGCTC 1 cut(s) 848
MboI GATC 6 cut(s) 12, 62, 196, 286, 580, 1171
MflI RGATCY 2 cut(s) 12, 196
MluCI AATT 7 cut(s) 139, 249, 354, 463, 699, 1103, 1278
MlyI GAGTC 3 cut(s) 198, 910, 1348
Mph1103I ATGCAT 1 cut(s) 592
MseI TTAA 6 cut(s) 462, 756, 902, 1013, 1074, 1196
MslI CAYNNNNRTG 4 cut(s) 70, 157, 996, 1205
MspCI CTTAAG 1 cut(s) 1073
MspI CCGG 1 cut(s) 1186
MspR9I CCNGG 2 cut(s) 108, 1030
Mva1269I GAATGC 1 cut(s) 691
MvaI CCWGG 2 cut(s) 108, 1030
MwoI GCNNNNNNNGC 3 cut(s) 15, 767, 1162
NdeI CATATG 1 cut(s) 997
NdeII GATC 6 cut(s) 12, 62, 196, 286, 580, 1171
NlaIII CATG 6 cut(s) 127, 156, 426, 628, 1204, 1262
NlaIV GGNNCC 3 cut(s) 135, 382, 645
NmuCI GTSAC 1 cut(s) 1351
NsiI ATGCAT 1 cut(s) 592
NspI RCATGY 1 cut(s) 156
PaeR7I CTCGAG 1 cut(s) 206
PcsI WCGNNNNNNNCGW 1 cut(s) 490
PctI GAATGC 1 cut(s) 691
PfeI GAWTC 3 cut(s) 120, 1066, 1121
PflFI GACNNNGTC 1 cut(s) 919
PkrI GCNGC 1 cut(s) 673
PleI GAGTC 3 cut(s) 198, 910, 1348
PpsI GAGTC 3 cut(s) 198, 910, 1348
PpuMI RGGWCCY 1 cut(s) 707
PshAI GACNNNNGTC 1 cut(s) 712
PshBI ATTAAT 1 cut(s) 462
Psp5II RGGWCCY 1 cut(s) 707
Psp6I CCWGG 2 cut(s) 106, 1028
PspFI CCCAGC 1 cut(s) 129
PspGI CCWGG 2 cut(s) 106, 1028
PspN4I GGNNCC 3 cut(s) 135, 382, 645
PspPI GGNCC 2 cut(s) 707, 769
PspPPI RGGWCCY 1 cut(s) 707
PspXI VCTCGAGB 1 cut(s) 206
PsuI RGATCY 2 cut(s) 12, 196
PsyI GACNNNGTC 1 cut(s) 919
RsaI GTAC 3 cut(s) 212, 615, 747
RsaNI GTAC 3 cut(s) 211, 614, 746
RseI CAYNNNNRTG 4 cut(s) 70, 157, 996, 1205
SalI GTCGAC 1 cut(s) 489
SaqAI TTAA 6 cut(s) 462, 756, 902, 1013, 1074, 1196
SatI GCNGC 1 cut(s) 672
Sau3AI GATC 6 cut(s) 12, 62, 196, 286, 580, 1171
Sau96I GGNCC 2 cut(s) 707, 769
ScaI AGTACT 1 cut(s) 212
SchI GAGTC 3 cut(s) 198, 910, 1348
ScrFI CCNGG 2 cut(s) 108, 1030
SfaNI GCATC 2 cut(s) 262, 599
Sfr274I CTCGAG 1 cut(s) 206
SinI GGWCC 1 cut(s) 707
SlaI CTCGAG 1 cut(s) 206
SmiMI CAYNNNNRTG 4 cut(s) 70, 157, 996, 1205
SmlI CTYRAG 2 cut(s) 206, 1073
SmoI CTYRAG 2 cut(s) 206, 1073
SpeI ACTAGT 1 cut(s) 86
Sse9I AATT 7 cut(s) 139, 249, 354, 463, 699, 1103, 1278
SsiI CCGC 2 cut(s) 848, 1144
SspMI CTAG 3 cut(s) 87, 386, 704
StyD4I CCNGG 2 cut(s) 106, 1028
TaaI ACNGT 4 cut(s) 434, 754, 1054, 1381
TaiI ACGT 4 cut(s) 370, 496, 528, 844
TaqI TCGA 3 cut(s) 207, 289, 490
TaqII GACCGA 1 cut(s) 40
TasI AATT 7 cut(s) 139, 249, 354, 463, 699, 1103, 1278
TatI WGTACW 2 cut(s) 210, 613
TfiI GAWTC 3 cut(s) 120, 1066, 1121
Tru1I TTAA 6 cut(s) 462, 756, 902, 1013, 1074, 1196
Tru9I TTAA 6 cut(s) 462, 756, 902, 1013, 1074, 1196
TscAI CASTG 3 cut(s) 164, 437, 612
TseFI GTSAC 1 cut(s) 1351
TseI GCWGC 1 cut(s) 671
Tsp45I GTSAC 1 cut(s) 1351
TspDTI ATGAA 5 cut(s) 112, 420, 926, 987, 1247
TspGWI ACGGA 2 cut(s) 702, 1214
TspRI CASTG 3 cut(s) 164, 437, 612
Tth111I GACNNNGTC 1 cut(s) 919
Vha464I CTTAAG 1 cut(s) 1073
VpaK11BI GGWCC 1 cut(s) 707
VspI ATTAAT 1 cut(s) 462
XapI RAATTY 1 cut(s) 1278
XceI RCATGY 1 cut(s) 156
XhoI CTCGAG 1 cut(s) 206
XmiI GTMKAC 2 cut(s) 490, 522
XspI CTAG 3 cut(s) 87, 386, 704
ZrmI AGTACT 1 cut(s) 212
Zsp2I ATGCAT 1 cut(s) 592
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.