Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 2 cut(s) | 25, 349 |
| AclWI | GGATC | 2 cut(s) | 84, 546 |
| AcsI | RAATTY | 2 cut(s) | 385, 407 |
| AcyI | GRCGYC | 1 cut(s) | 352 |
| AfaI | GTAC | 1 cut(s) | 175 |
| AjnI | CCWGG | 1 cut(s) | 72 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 579, 611 |
| AluBI | AGCT | 2 cut(s) | 194, 495 |
| AluI | AGCT | 2 cut(s) | 194, 495 |
| Alw26I | GTCTC | 2 cut(s) | 231, 448 |
| AlwI | GGATC | 2 cut(s) | 84, 546 |
| ApeKI | GCWGC | 1 cut(s) | 191 |
| ApoI | RAATTY | 2 cut(s) | 385, 407 |
| AseI | ATTAAT | 1 cut(s) | 243 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 8 |
| AsuII | TTCGAA | 1 cut(s) | 730 |
| BaeGI | GKGCMC | 1 cut(s) | 583 |
| BanII | GRGCYC | 1 cut(s) | 421 |
| BbvI | GCAGC | 1 cut(s) | 203 |
| BccI | CCATC | 1 cut(s) | 142 |
| BciT130I | CCWGG | 1 cut(s) | 74 |
| BclI | TGATCA | 1 cut(s) | 262 |
| BcoDI | GTCTC | 2 cut(s) | 231, 448 |
| BfaI | CTAG | 1 cut(s) | 255 |
| BisI | GCNGC | 3 cut(s) | 26, 192, 350 |
| BlsI | GCNGC | 3 cut(s) | 27, 193, 351 |
| BmcAI | AGTACT | 1 cut(s) | 175 |
| Bme1390I | CCNGG | 1 cut(s) | 74 |
| BmrFI | CCNGG | 1 cut(s) | 74 |
| BmrI | ACTGGG | 1 cut(s) | 193 |
| BmuI | ACTGGG | 1 cut(s) | 193 |
| BpmI | CTGGAG | 1 cut(s) | 417 |
| Bpu14I | TTCGAA | 1 cut(s) | 730 |
| BsaBI | GATNNNNATC | 2 cut(s) | 81, 543 |
| BsaHI | GRCGYC | 1 cut(s) | 352 |
| BsaJI | CCNNGG | 1 cut(s) | 482 |
| Bse1I | ACTGG | 2 cut(s) | 188, 740 |
| Bse8I | GATNNNNATC | 2 cut(s) | 81, 543 |
| BseBI | CCWGG | 1 cut(s) | 74 |
| BseDI | CCNNGG | 1 cut(s) | 482 |
| BseGI | GGATG | 3 cut(s) | 153, 216, 615 |
| BseJI | GATNNNNATC | 2 cut(s) | 81, 543 |
| BseMII | CTCAG | 1 cut(s) | 152 |
| BseNI | ACTGG | 2 cut(s) | 188, 740 |
| BseRI | GAGGAG | 1 cut(s) | 464 |
| BseSI | GKGCMC | 1 cut(s) | 583 |
| BseXI | GCAGC | 1 cut(s) | 203 |
| BseYI | CCCAGC | 1 cut(s) | 495 |
| BsgI | GTGCAG | 1 cut(s) | 210 |
| BslFI | GGGAC | 1 cut(s) | 512 |
| BsmAI | GTCTC | 2 cut(s) | 231, 448 |
| BsmBI | CGTCTC | 1 cut(s) | 231 |
| BsmFI | GGGAC | 1 cut(s) | 512 |
| BsmI | GAATGC | 1 cut(s) | 675 |
| Bsp119I | TTCGAA | 1 cut(s) | 730 |
| Bsp1286I | GDGCHC | 2 cut(s) | 421, 583 |
| Bsp143I | GATC | 4 cut(s) | 76, 262, 460, 538 |
| BspACI | CCGC | 2 cut(s) | 25, 349 |
| BspCNI | CTCAG | 1 cut(s) | 151 |
| BspHI | TCATGA | 1 cut(s) | 552 |
| BspPI | GGATC | 2 cut(s) | 84, 546 |
| BspT104I | TTCGAA | 1 cut(s) | 730 |
| BsrI | ACTGG | 2 cut(s) | 188, 740 |
| BssECI | CCNNGG | 1 cut(s) | 482 |
| BssMI | GATC | 4 cut(s) | 76, 262, 460, 538 |
| BssNI | GRCGYC | 1 cut(s) | 352 |
| BssT1I | CCWWGG | 1 cut(s) | 482 |
| Bst2UI | CCWGG | 1 cut(s) | 74 |
| Bst4CI | ACNGT | 2 cut(s) | 225, 283 |
| Bst6I | CTCTTC | 2 cut(s) | 234, 525 |
| BstACI | GRCGYC | 1 cut(s) | 352 |
| BstBI | TTCGAA | 1 cut(s) | 730 |
| BstC8I | GCNNGC | 2 cut(s) | 328, 583 |
| BstDEI | CTNAG | 2 cut(s) | 59, 138 |
| BstF5I | GGATG | 3 cut(s) | 153, 216, 615 |
| BstKTI | GATC | 4 cut(s) | 79, 265, 463, 541 |
| BstMAI | GTCTC | 2 cut(s) | 231, 448 |
| BstMBI | GATC | 4 cut(s) | 76, 262, 460, 538 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 578 |
| BstNI | CCWGG | 1 cut(s) | 74 |
| BstSCI | CCNGG | 1 cut(s) | 72 |
| BstSLI | GKGCMC | 1 cut(s) | 583 |
| BstV1I | GCAGC | 1 cut(s) | 203 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 160 |
| BtsCI | GGATG | 3 cut(s) | 153, 216, 615 |
| BtsI | GCAGTG | 1 cut(s) | 656 |
| BtsIMutI | CAGTG | 2 cut(s) | 308, 656 |
| Cac8I | GCNNGC | 2 cut(s) | 328, 583 |
| CciI | TCATGA | 1 cut(s) | 552 |
| CseI | GACGC | 1 cut(s) | 341 |
| Csp6I | GTAC | 1 cut(s) | 174 |
| CviAII | CATG | 4 cut(s) | 154, 236, 553, 674 |
| CviJI | RGCY | 4 cut(s) | 194, 419, 495, 725 |
| CviKI_1 | RGCY | 4 cut(s) | 194, 419, 495, 725 |
| CviQI | GTAC | 1 cut(s) | 174 |
| DdeI | CTNAG | 2 cut(s) | 59, 138 |
| DpnI | GATC | 4 cut(s) | 78, 264, 462, 540 |
| DpnII | GATC | 4 cut(s) | 76, 262, 460, 538 |
| Eam1104I | CTCTTC | 2 cut(s) | 234, 525 |
| EarI | CTCTTC | 2 cut(s) | 234, 525 |
| Eco130I | CCWWGG | 1 cut(s) | 482 |
| Eco24I | GRGCYC | 1 cut(s) | 421 |
| EcoRI | GAATTC | 1 cut(s) | 407 |
| EcoRII | CCWGG | 1 cut(s) | 72 |
| EcoT14I | CCWWGG | 1 cut(s) | 482 |
| EcoT22I | ATGCAT | 1 cut(s) | 675 |
| EcoT38I | GRGCYC | 1 cut(s) | 421 |
| ErhI | CCWWGG | 1 cut(s) | 482 |
| Esp3I | CGTCTC | 1 cut(s) | 231 |
| FaeI | CATG | 4 cut(s) | 157, 239, 556, 677 |
| FaqI | GGGAC | 1 cut(s) | 512 |
| FatI | CATG | 4 cut(s) | 153, 235, 552, 673 |
| FbaI | TGATCA | 1 cut(s) | 262 |
| Fnu4HI | GCNGC | 3 cut(s) | 26, 192, 350 |
| FokI | GGATG | 3 cut(s) | 160, 223, 622 |
| FriOI | GRGCYC | 1 cut(s) | 421 |
| Fsp4HI | GCNGC | 3 cut(s) | 26, 192, 350 |
| FspBI | CTAG | 1 cut(s) | 255 |
| GluI | GCNGC | 3 cut(s) | 26, 192, 350 |
| GsaI | CCCAGC | 1 cut(s) | 499 |
| GsuI | CTGGAG | 1 cut(s) | 417 |
| HgaI | GACGC | 1 cut(s) | 341 |
| Hin1I | GRCGYC | 1 cut(s) | 352 |
| Hin1II | CATG | 4 cut(s) | 157, 239, 556, 677 |
| HinfI | GANTC | 5 cut(s) | 125, 293, 500, 659, 711 |
| Hpy188I | TCNGA | 2 cut(s) | 538, 668 |
| Hpy188III | TCNNGA | 3 cut(s) | 86, 396, 553 |
| HpyAV | CCTTC | 2 cut(s) | 65, 737 |
| HpyCH4III | ACNGT | 2 cut(s) | 225, 283 |
| HpyCH4V | TGCA | 5 cut(s) | 191, 219, 516, 673, 697 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 578 |
| HpyF3I | CTNAG | 2 cut(s) | 59, 138 |
| Hsp92I | GRCGYC | 1 cut(s) | 352 |
| Hsp92II | CATG | 4 cut(s) | 157, 239, 556, 677 |
| Ksp22I | TGATCA | 1 cut(s) | 262 |
| Kzo9I | GATC | 4 cut(s) | 76, 262, 460, 538 |
| LpnPI | CCDG | 7 cut(s) | 59, 86, 169, 381, 481, 620, 721 |
| Lsp1109I | GCAGC | 1 cut(s) | 203 |
| MaeI | CTAG | 1 cut(s) | 255 |
| MaeIII | GTNAC | 2 cut(s) | 271, 283 |
| MalI | GATC | 4 cut(s) | 78, 264, 462, 540 |
| MboI | GATC | 4 cut(s) | 76, 262, 460, 538 |
| MboII | GAAGA | 4 cut(s) | 16, 221, 470, 512 |
| MhlI | GDGCHC | 2 cut(s) | 421, 583 |
| MluCI | AATT | 6 cut(s) | 202, 240, 385, 407, 704, 739 |
| MlyI | GAGTC | 3 cut(s) | 119, 494, 720 |
| MmeI | TCCRAC | 1 cut(s) | 468 |
| MnlI | CCTC | 5 cut(s) | 334, 392, 431, 442, 534 |
| Mph1103I | ATGCAT | 1 cut(s) | 675 |
| MroXI | GAANNNNTTC | 1 cut(s) | 8 |
| MseI | TTAA | 3 cut(s) | 243, 378, 707 |
| MslI | CAYNNNNRTG | 3 cut(s) | 87, 335, 429 |
| MspA1I | CMGCKG | 1 cut(s) | 349 |
| MspR9I | CCNGG | 1 cut(s) | 74 |
| Mva1269I | GAATGC | 1 cut(s) | 675 |
| MvaI | CCWGG | 1 cut(s) | 74 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 578 |
| NdeII | GATC | 4 cut(s) | 76, 262, 460, 538 |
| NlaIII | CATG | 4 cut(s) | 157, 239, 556, 677 |
| NmuCI | GTSAC | 1 cut(s) | 271 |
| NsiI | ATGCAT | 1 cut(s) | 675 |
| NspV | TTCGAA | 1 cut(s) | 730 |
| PagI | TCATGA | 1 cut(s) | 552 |
| PctI | GAATGC | 1 cut(s) | 675 |
| PdmI | GAANNNNTTC | 1 cut(s) | 8 |
| PfeI | GAWTC | 2 cut(s) | 293, 659 |
| PfoI | TCCNGGA | 1 cut(s) | 72 |
| PkrI | GCNGC | 3 cut(s) | 27, 193, 351 |
| PleI | GAGTC | 3 cut(s) | 119, 494, 719 |
| PpsI | GAGTC | 3 cut(s) | 119, 494, 719 |
| PshBI | ATTAAT | 1 cut(s) | 243 |
| Psp6I | CCWGG | 1 cut(s) | 72 |
| PspFI | CCCAGC | 1 cut(s) | 495 |
| PspGI | CCWGG | 1 cut(s) | 72 |
| RsaI | GTAC | 1 cut(s) | 175 |
| RsaNI | GTAC | 1 cut(s) | 174 |
| RseI | CAYNNNNRTG | 3 cut(s) | 87, 335, 429 |
| SaqAI | TTAA | 3 cut(s) | 243, 378, 707 |
| SatI | GCNGC | 3 cut(s) | 26, 192, 350 |
| Sau3AI | GATC | 4 cut(s) | 76, 262, 460, 538 |
| ScaI | AGTACT | 1 cut(s) | 175 |
| SchI | GAGTC | 3 cut(s) | 119, 494, 720 |
| ScrFI | CCNGG | 1 cut(s) | 74 |
| SduI | GDGCHC | 2 cut(s) | 421, 583 |
| SetI | ASST | 8 cut(s) | 57, 112, 196, 369, 442, 497, 563, 608 |
| SfuI | TTCGAA | 1 cut(s) | 730 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 87, 335, 429 |
| Sse9I | AATT | 6 cut(s) | 202, 240, 385, 407, 704, 739 |
| SsiI | CCGC | 2 cut(s) | 25, 349 |
| SspMI | CTAG | 1 cut(s) | 255 |
| StyD4I | CCNGG | 1 cut(s) | 72 |
| StyI | CCWWGG | 1 cut(s) | 482 |
| TaaI | ACNGT | 2 cut(s) | 225, 283 |
| TaqI | TCGA | 1 cut(s) | 730 |
| TasI | AATT | 6 cut(s) | 202, 240, 385, 407, 704, 739 |
| TatI | WGTACW | 1 cut(s) | 173 |
| TauI | GCSGC | 2 cut(s) | 28, 352 |
| TfiI | GAWTC | 2 cut(s) | 293, 659 |
| Tru1I | TTAA | 3 cut(s) | 243, 378, 707 |
| Tru9I | TTAA | 3 cut(s) | 243, 378, 707 |
| TscAI | CASTG | 2 cut(s) | 308, 656 |
| TseFI | GTSAC | 1 cut(s) | 271 |
| TseI | GCWGC | 1 cut(s) | 191 |
| Tsp45I | GTSAC | 1 cut(s) | 271 |
| TspDTI | ATGAA | 2 cut(s) | 17, 170 |
| TspRI | CASTG | 2 cut(s) | 308, 656 |
| VspI | ATTAAT | 1 cut(s) | 243 |
| XapI | RAATTY | 2 cut(s) | 385, 407 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 141, 160 |
| XmnI | GAANNNNTTC | 1 cut(s) | 8 |
| XspI | CTAG | 1 cut(s) | 255 |
| ZrmI | AGTACT | 1 cut(s) | 175 |
| Zsp2I | ATGCAT | 1 cut(s) | 675 |