Domain of unknown function (DUF4283)
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| zf-CCHC_4 | PF14392 | 107 - 142 | 6.4e-07 | Zinc knuckle |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 610 |
| Acc65I | GGTACC | 1 cut(s) | 1022 |
| AccB1I | GGYRCC | 1 cut(s) | 1022 |
| AccBSI | CCGCTC | 1 cut(s) | 531 |
| AccI | GTMKAC | 1 cut(s) | 790 |
| AccII | CGCG | 3 cut(s) | 195, 450, 525 |
| AciI | CCGC | 7 cut(s) | 12, 195, 450, 525, 529, 559, 723 |
| AclWI | GGATC | 1 cut(s) | 160 |
| AcoI | YGGCCR | 2 cut(s) | 403, 526 |
| AcsI | RAATTY | 1 cut(s) | 962 |
| AcuI | CTGAAG | 1 cut(s) | 1034 |
| AcyI | GRCGYC | 1 cut(s) | 550 |
| AdeI | CACNNNGTG | 1 cut(s) | 596 |
| AfaI | GTAC | 4 cut(s) | 328, 600, 684, 1024 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 248, 249, 250, 684, 685, 1045 |
| AgsI | TTSAA | 1 cut(s) | 359 |
| AhlI | ACTAGT | 1 cut(s) | 509 |
| AjnI | CCWGG | 3 cut(s) | 219, 273, 1018 |
| AluBI | AGCT | 8 cut(s) | 503, 645, 743, 767, 846, 998, 1012, 1033 |
| AluI | AGCT | 8 cut(s) | 503, 645, 743, 767, 846, 998, 1012, 1033 |
| Alw21I | GWGCWC | 3 cut(s) | 381, 468, 586 |
| Alw44I | GTGCAC | 1 cut(s) | 582 |
| AlwI | GGATC | 1 cut(s) | 160 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 347 |
| Ama87I | CYCGRG | 1 cut(s) | 540 |
| AoxI | GGCC | 8 cut(s) | 6, 264, 299, 403, 526, 544, 687, 1050 |
| ApaLI | GTGCAC | 1 cut(s) | 582 |
| ApeKI | GCWGC | 7 cut(s) | 20, 370, 503, 515, 605, 645, 740 |
| ApoI | RAATTY | 1 cut(s) | 962 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 547, 579, 1020, 1052 |
| Asp718I | GGTACC | 1 cut(s) | 1022 |
| AspLEI | GCGC | 2 cut(s) | 195, 450 |
| AspS9I | GGNCC | 5 cut(s) | 455, 687, 805, 1036, 1050 |
| AsuC2I | CCSGG | 1 cut(s) | 870 |
| AsuHPI | GGTGA | 5 cut(s) | 38, 231, 910, 956, 1000 |
| AsuNHI | GCTAGC | 1 cut(s) | 821 |
| AvaI | CYCGRG | 1 cut(s) | 540 |
| AvaII | GGWCC | 3 cut(s) | 455, 805, 1036 |
| BaeGI | GKGCMC | 1 cut(s) | 586 |
| BalI | TGGCCA | 1 cut(s) | 405 |
| BanI | GGYRCC | 1 cut(s) | 1022 |
| BanII | GRGCYC | 1 cut(s) | 201 |
| Bbv12I | GWGCWC | 3 cut(s) | 381, 468, 586 |
| BbvI | GCAGC | 7 cut(s) | 7, 357, 490, 502, 592, 632, 752 |
| BccI | CCATC | 3 cut(s) | 146, 148, 470 |
| BceAI | ACGGC | 2 cut(s) | 546, 642 |
| BciT130I | CCWGG | 3 cut(s) | 221, 275, 1020 |
| BclI | TGATCA | 2 cut(s) | 658, 715 |
| BcnI | CCSGG | 1 cut(s) | 870 |
| BcuI | ACTAGT | 1 cut(s) | 509 |
| BfaI | CTAG | 3 cut(s) | 510, 579, 822 |
| BfmI | CTRYAG | 1 cut(s) | 1040 |
| BfuAI | ACCTGC | 1 cut(s) | 610 |
| BlpI | GCTNAGC | 1 cut(s) | 668 |
| Bme1390I | CCNGG | 4 cut(s) | 221, 275, 870, 1020 |
| Bme18I | GGWCC | 3 cut(s) | 455, 805, 1036 |
| BmeT110I | CYCGRG | 1 cut(s) | 540 |
| BmgT120I | GGNCC | 5 cut(s) | 455, 687, 805, 1036, 1050 |
| BmiI | GGNNCC | 5 cut(s) | 33, 457, 807, 1024, 1051 |
| BmrFI | CCNGG | 4 cut(s) | 221, 275, 870, 1020 |
| BmrI | ACTGGG | 1 cut(s) | 674 |
| BmsI | GCATC | 5 cut(s) | 328, 435, 627, 657, 898 |
| BmtI | GCTAGC | 1 cut(s) | 825 |
| BmuI | ACTGGG | 1 cut(s) | 674 |
| BpmI | CTGGAG | 1 cut(s) | 954 |
| Bpu10I | CCTNAGC | 1 cut(s) | 780 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 668 |
| BpuEI | CTTGAG | 1 cut(s) | 862 |
| BpuMI | CCSGG | 1 cut(s) | 870 |
| BsaBI | GATNNNNATC | 1 cut(s) | 170 |
| BsaHI | GRCGYC | 1 cut(s) | 550 |
| BsaJI | CCNNGG | 3 cut(s) | 109, 261, 690 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 327, 357 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 248, 249, 250, 684, 685, 1045 |
| Bse118I | RCCGGY | 3 cut(s) | 4, 23, 546 |
| Bse1I | ACTGG | 3 cut(s) | 374, 680, 971 |
| Bse3DI | GCAATG | 1 cut(s) | 852 |
| Bse8I | GATNNNNATC | 1 cut(s) | 170 |
| BseBI | CCWGG | 3 cut(s) | 221, 275, 1020 |
| BseDI | CCNNGG | 3 cut(s) | 109, 261, 690 |
| BseGI | GGATG | 1 cut(s) | 648 |
| BseJI | GATNNNNATC | 1 cut(s) | 170 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 248, 249, 250, 684, 685, 1045 |
| BseMI | GCAATG | 1 cut(s) | 852 |
| BseMII | CTCAG | 2 cut(s) | 453, 794 |
| BseNI | ACTGG | 3 cut(s) | 374, 680, 971 |
| BseRI | GAGGAG | 4 cut(s) | 27, 44, 838, 855 |
| BseSI | GKGCMC | 1 cut(s) | 586 |
| BseX3I | CGGCCG | 1 cut(s) | 526 |
| BseXI | GCAGC | 7 cut(s) | 7, 357, 490, 502, 592, 632, 752 |
| BsgI | GTGCAG | 2 cut(s) | 442, 779 |
| Bsh1236I | CGCG | 3 cut(s) | 195, 450, 525 |
| Bsh1285I | CGRYCG | 2 cut(s) | 205, 529 |
| BshFI | GGCC | 8 cut(s) | 8, 266, 301, 405, 528, 546, 689, 1052 |
| BshNI | GGYRCC | 1 cut(s) | 1022 |
| BsiEI | CGRYCG | 2 cut(s) | 205, 529 |
| BsiHKAI | GWGCWC | 3 cut(s) | 381, 468, 586 |
| BsiHKCI | CYCGRG | 1 cut(s) | 540 |
| BsiSI | CCGG | 4 cut(s) | 5, 24, 547, 869 |
| BslFI | GGGAC | 1 cut(s) | 89 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 248, 249, 250, 684, 685, 1045 |
| BsmFI | GGGAC | 1 cut(s) | 89 |
| BsnI | GGCC | 8 cut(s) | 8, 266, 301, 405, 528, 546, 689, 1052 |
| BsoBI | CYCGRG | 1 cut(s) | 540 |
| Bsp1286I | GDGCHC | 4 cut(s) | 201, 381, 468, 586 |
| Bsp143I | GATC | 5 cut(s) | 165, 202, 658, 715, 918 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 668 |
| BspACI | CCGC | 7 cut(s) | 12, 195, 450, 525, 529, 559, 723 |
| BspANI | GGCC | 8 cut(s) | 8, 266, 301, 405, 528, 546, 689, 1052 |
| BspCNI | CTCAG | 2 cut(s) | 454, 793 |
| BspFNI | CGCG | 3 cut(s) | 195, 450, 525 |
| BspLI | GGNNCC | 5 cut(s) | 33, 457, 807, 1024, 1051 |
| BspMAI | CTGCAG | 1 cut(s) | 1044 |
| BspMI | ACCTGC | 1 cut(s) | 610 |
| BspOI | GCTAGC | 1 cut(s) | 825 |
| BspPI | GGATC | 1 cut(s) | 160 |
| BspT107I | GGYRCC | 1 cut(s) | 1022 |
| BsrBI | CCGCTC | 1 cut(s) | 531 |
| BsrDI | GCAATG | 1 cut(s) | 852 |
| BsrFI | RCCGGY | 3 cut(s) | 4, 23, 546 |
| BsrI | ACTGG | 3 cut(s) | 374, 680, 971 |
| BssAI | RCCGGY | 3 cut(s) | 4, 23, 546 |
| BssECI | CCNNGG | 3 cut(s) | 109, 261, 690 |
| BssMI | GATC | 5 cut(s) | 165, 202, 658, 715, 918 |
| BssNI | GRCGYC | 1 cut(s) | 550 |
| BssT1I | CCWWGG | 2 cut(s) | 109, 261 |
| Bst2UI | CCWGG | 3 cut(s) | 221, 275, 1020 |
| Bst4CI | ACNGT | 1 cut(s) | 618 |
| BstACI | GRCGYC | 1 cut(s) | 550 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 347 |
| BstC8I | GCNNGC | 4 cut(s) | 6, 197, 548, 823 |
| BstDEI | CTNAG | 3 cut(s) | 462, 668, 780 |
| BstDSI | CCRYGG | 1 cut(s) | 690 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1043 |
| BstF5I | GGATG | 1 cut(s) | 648 |
| BstFNI | CGCG | 3 cut(s) | 195, 450, 525 |
| BstHHI | GCGC | 2 cut(s) | 195, 450 |
| BstKTI | GATC | 5 cut(s) | 168, 205, 661, 718, 921 |
| BstMBI | GATC | 5 cut(s) | 165, 202, 658, 715, 918 |
| BstMCI | CGRYCG | 2 cut(s) | 205, 529 |
| BstNI | CCWGG | 3 cut(s) | 221, 275, 1020 |
| BstSCI | CCNGG | 4 cut(s) | 219, 273, 868, 1018 |
| BstSFI | CTRYAG | 1 cut(s) | 1040 |
| BstSLI | GKGCMC | 1 cut(s) | 586 |
| BstUI | CGCG | 3 cut(s) | 195, 450, 525 |
| BstV1I | GCAGC | 7 cut(s) | 7, 357, 490, 502, 592, 632, 752 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 274, 1033 |
| BstZI | CGGCCG | 1 cut(s) | 526 |
| BsuRI | GGCC | 8 cut(s) | 8, 266, 301, 405, 528, 546, 689, 1052 |
| BtgI | CCRYGG | 1 cut(s) | 690 |
| BtsCI | GGATG | 1 cut(s) | 648 |
| BtsI | GCAGTG | 4 cut(s) | 345, 447, 762, 832 |
| BtsIMutI | CAGTG | 5 cut(s) | 345, 381, 447, 762, 832 |
| BveI | ACCTGC | 1 cut(s) | 610 |
| Cac8I | GCNNGC | 4 cut(s) | 6, 197, 548, 823 |
| CaiI | CAGNNNCTG | 1 cut(s) | 347 |
| CciNI | GCGGCCGC | 1 cut(s) | 526 |
| CfoI | GCGC | 2 cut(s) | 195, 450 |
| Cfr10I | RCCGGY | 3 cut(s) | 4, 23, 546 |
| Cfr13I | GGNCC | 5 cut(s) | 455, 687, 805, 1036, 1050 |
| CseI | GACGC | 1 cut(s) | 539 |
| Csp6I | GTAC | 4 cut(s) | 327, 599, 683, 1023 |
| CviAII | CATG | 6 cut(s) | 256, 332, 719, 731, 752, 1071 |
| CviQI | GTAC | 4 cut(s) | 327, 599, 683, 1023 |
| DdeI | CTNAG | 3 cut(s) | 462, 668, 780 |
| DpnI | GATC | 5 cut(s) | 167, 204, 660, 717, 920 |
| DpnII | GATC | 5 cut(s) | 165, 202, 658, 715, 918 |
| DraIII | CACNNNGTG | 1 cut(s) | 596 |
| EaeI | YGGCCR | 2 cut(s) | 403, 526 |
| EagI | CGGCCG | 1 cut(s) | 526 |
| EclXI | CGGCCG | 1 cut(s) | 526 |
| Eco130I | CCWWGG | 2 cut(s) | 109, 261 |
| Eco24I | GRGCYC | 1 cut(s) | 201 |
| Eco47I | GGWCC | 3 cut(s) | 455, 805, 1036 |
| Eco52I | CGGCCG | 1 cut(s) | 526 |
| Eco57I | CTGAAG | 1 cut(s) | 1034 |
| Eco88I | CYCGRG | 1 cut(s) | 540 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1043 |
| EcoO109I | RGGNCCY | 1 cut(s) | 455 |
| EcoRII | CCWGG | 3 cut(s) | 219, 273, 1018 |
| EcoT14I | CCWWGG | 2 cut(s) | 109, 261 |
| EcoT22I | ATGCAT | 1 cut(s) | 913 |
| EcoT38I | GRGCYC | 1 cut(s) | 201 |
| ErhI | CCWWGG | 2 cut(s) | 109, 261 |
| FaeI | CATG | 6 cut(s) | 259, 335, 722, 734, 755, 1074 |
| FaqI | GGGAC | 1 cut(s) | 89 |
| FatI | CATG | 6 cut(s) | 255, 331, 718, 730, 751, 1070 |
| FauI | CCCGC | 2 cut(s) | 188, 566 |
| FbaI | TGATCA | 2 cut(s) | 658, 715 |
| FblI | GTMKAC | 1 cut(s) | 790 |
| FokI | GGATG | 1 cut(s) | 635 |
| FriOI | GRGCYC | 1 cut(s) | 201 |
| FspBI | CTAG | 3 cut(s) | 510, 579, 822 |
| GlaI | GCGC | 2 cut(s) | 194, 449 |
| GsuI | CTGGAG | 1 cut(s) | 954 |
| HaeIII | GGCC | 8 cut(s) | 8, 266, 301, 405, 528, 546, 689, 1052 |
| HapII | CCGG | 4 cut(s) | 5, 24, 547, 869 |
| HgaI | GACGC | 1 cut(s) | 539 |
| HhaI | GCGC | 2 cut(s) | 195, 450 |
| Hin1I | GRCGYC | 1 cut(s) | 550 |
| Hin1II | CATG | 6 cut(s) | 259, 335, 722, 734, 755, 1074 |
| Hin6I | GCGC | 2 cut(s) | 193, 448 |
| HinP1I | GCGC | 2 cut(s) | 193, 448 |
| HincII | GTYRAC | 1 cut(s) | 621 |
| HindII | GTYRAC | 1 cut(s) | 621 |
| HinfI | GANTC | 3 cut(s) | 156, 365, 538 |
| HpaI | GTTAAC | 1 cut(s) | 621 |
| HpaII | CCGG | 4 cut(s) | 5, 24, 547, 869 |
| HphI | GGTGA | 5 cut(s) | 38, 231, 910, 956, 1000 |
| Hpy166II | GTNNAC | 7 cut(s) | 329, 569, 584, 599, 621, 791, 805 |
| Hpy188I | TCNGA | 4 cut(s) | 100, 178, 436, 463 |
| Hpy188III | TCNNGA | 4 cut(s) | 163, 226, 634, 782 |
| Hpy8I | GTNNAC | 7 cut(s) | 329, 569, 584, 599, 621, 791, 805 |
| Hpy99I | CGWCG | 2 cut(s) | 555, 567 |
| HpyAV | CCTTC | 3 cut(s) | 568, 950, 1039 |
| HpyCH4III | ACNGT | 1 cut(s) | 618 |
| HpyCH4IV | ACGT | 3 cut(s) | 289, 468, 793 |
| HpyF3I | CTNAG | 3 cut(s) | 462, 668, 780 |
| HpySE526I | ACGT | 3 cut(s) | 289, 468, 793 |
| Hsp92I | GRCGYC | 1 cut(s) | 550 |
| Hsp92II | CATG | 6 cut(s) | 259, 335, 722, 734, 755, 1074 |
| HspAI | GCGC | 2 cut(s) | 193, 448 |
| KpnI | GGTACC | 1 cut(s) | 1026 |
| KroI | GCCGGC | 2 cut(s) | 4, 546 |
| KroNI | GCCGGC | 2 cut(s) | 6, 548 |
| Ksp22I | TGATCA | 2 cut(s) | 658, 715 |
| KspAI | GTTAAC | 1 cut(s) | 621 |
| Kzo9I | GATC | 5 cut(s) | 165, 202, 658, 715, 918 |
| LmnI | GCTCC | 4 cut(s) | 31, 536, 851, 868 |
| Lsp1109I | GCAGC | 7 cut(s) | 7, 357, 490, 502, 592, 632, 752 |
| LweI | GCATC | 5 cut(s) | 328, 435, 627, 657, 898 |
| MaeI | CTAG | 3 cut(s) | 510, 579, 822 |
| MaeII | ACGT | 3 cut(s) | 289, 468, 793 |
| MaeIII | GTNAC | 3 cut(s) | 160, 343, 838 |
| MalI | GATC | 5 cut(s) | 167, 204, 660, 717, 920 |
| MbiI | CCGCTC | 1 cut(s) | 531 |
| MboI | GATC | 5 cut(s) | 165, 202, 658, 715, 918 |
| MboII | GAAGA | 1 cut(s) | 87 |
| MfeI | CAATTG | 1 cut(s) | 313 |
| MhlI | GDGCHC | 4 cut(s) | 201, 381, 468, 586 |
| MlsI | TGGCCA | 1 cut(s) | 405 |
| MluCI | AATT | 5 cut(s) | 230, 313, 354, 798, 962 |
| MluNI | TGGCCA | 1 cut(s) | 405 |
| MlyI | GAGTC | 3 cut(s) | 165, 374, 532 |
| MmeI | TCCRAC | 2 cut(s) | 676, 814 |
| Mox20I | TGGCCA | 1 cut(s) | 405 |
| Mph1103I | ATGCAT | 1 cut(s) | 913 |
| MroNI | GCCGGC | 2 cut(s) | 4, 546 |
| MscI | TGGCCA | 1 cut(s) | 405 |
| MseI | TTAA | 2 cut(s) | 69, 620 |
| MslI | CAYNNNNRTG | 2 cut(s) | 336, 735 |
| Msp20I | TGGCCA | 1 cut(s) | 405 |
| MspI | CCGG | 4 cut(s) | 5, 24, 547, 869 |
| MspR9I | CCNGG | 4 cut(s) | 221, 275, 870, 1020 |
| MunI | CAATTG | 1 cut(s) | 313 |
| MvaI | CCWGG | 3 cut(s) | 221, 275, 1020 |
| MvnI | CGCG | 3 cut(s) | 195, 450, 525 |
| NaeI | GCCGGC | 2 cut(s) | 6, 548 |
| NciI | CCSGG | 1 cut(s) | 870 |
| NdeII | GATC | 5 cut(s) | 165, 202, 658, 715, 918 |
| NgoMIV | GCCGGC | 2 cut(s) | 4, 546 |
| NheI | GCTAGC | 1 cut(s) | 821 |
| NlaIII | CATG | 6 cut(s) | 259, 335, 722, 734, 755, 1074 |
| NlaIV | GGNNCC | 5 cut(s) | 33, 457, 807, 1024, 1051 |
| NmuCI | GTSAC | 3 cut(s) | 160, 343, 838 |
| NotI | GCGGCCGC | 1 cut(s) | 526 |
| NsiI | ATGCAT | 1 cut(s) | 913 |
| PaeR7I | CTCGAG | 1 cut(s) | 540 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 547, 559 |
| PdiI | GCCGGC | 2 cut(s) | 6, 548 |
| Ple19I | CGATCG | 1 cut(s) | 205 |
| PleI | GAGTC | 3 cut(s) | 164, 373, 532 |
| PpsI | GAGTC | 3 cut(s) | 164, 373, 532 |
| PpuMI | RGGWCCY | 1 cut(s) | 455 |
| Psp5II | RGGWCCY | 1 cut(s) | 455 |
| Psp6I | CCWGG | 3 cut(s) | 219, 273, 1018 |
| PspGI | CCWGG | 3 cut(s) | 219, 273, 1018 |
| PspN4I | GGNNCC | 5 cut(s) | 33, 457, 807, 1024, 1051 |
| PspPI | GGNCC | 5 cut(s) | 455, 687, 805, 1036, 1050 |
| PspPPI | RGGWCCY | 1 cut(s) | 455 |
| PspXI | VCTCGAGB | 1 cut(s) | 540 |
| PstI | CTGCAG | 1 cut(s) | 1044 |
| PstNI | CAGNNNCTG | 1 cut(s) | 347 |
| PvuI | CGATCG | 1 cut(s) | 205 |
| RsaI | GTAC | 4 cut(s) | 328, 600, 684, 1024 |
| RsaNI | GTAC | 4 cut(s) | 327, 599, 683, 1023 |
| RseI | CAYNNNNRTG | 2 cut(s) | 336, 735 |
| SaqAI | TTAA | 2 cut(s) | 69, 620 |
| Sau3AI | GATC | 5 cut(s) | 165, 202, 658, 715, 918 |
| Sau96I | GGNCC | 5 cut(s) | 455, 687, 805, 1036, 1050 |
| SchI | GAGTC | 3 cut(s) | 165, 374, 532 |
| ScrFI | CCNGG | 4 cut(s) | 221, 275, 870, 1020 |
| SduI | GDGCHC | 4 cut(s) | 201, 381, 468, 586 |
| SfaNI | GCATC | 5 cut(s) | 328, 435, 627, 657, 898 |
| SfcI | CTRYAG | 1 cut(s) | 1040 |
| Sfr274I | CTCGAG | 1 cut(s) | 540 |
| SinI | GGWCC | 3 cut(s) | 455, 805, 1036 |
| SlaI | CTCGAG | 1 cut(s) | 540 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 336, 735 |
| SmlI | CTYRAG | 2 cut(s) | 540, 877 |
| SmoI | CTYRAG | 2 cut(s) | 540, 877 |
| SpeI | ACTAGT | 1 cut(s) | 509 |
| Sse9I | AATT | 5 cut(s) | 230, 313, 354, 798, 962 |
| SsiI | CCGC | 7 cut(s) | 12, 195, 450, 525, 529, 559, 723 |
| SspMI | CTAG | 3 cut(s) | 510, 579, 822 |
| StyD4I | CCNGG | 4 cut(s) | 219, 273, 868, 1018 |
| StyI | CCWWGG | 2 cut(s) | 109, 261 |
| TaaI | ACNGT | 1 cut(s) | 618 |
| TaiI | ACGT | 3 cut(s) | 292, 471, 796 |
| TaqI | TCGA | 3 cut(s) | 201, 541, 553 |
| TasI | AATT | 5 cut(s) | 230, 313, 354, 798, 962 |
| TauI | GCSGC | 3 cut(s) | 528, 531, 725 |
| Tru1I | TTAA | 2 cut(s) | 69, 620 |
| Tru9I | TTAA | 2 cut(s) | 69, 620 |
| TscAI | CASTG | 5 cut(s) | 352, 381, 447, 762, 832 |
| TseFI | GTSAC | 3 cut(s) | 160, 343, 838 |
| TseI | GCWGC | 7 cut(s) | 20, 370, 503, 515, 605, 645, 740 |
| Tsp45I | GTSAC | 3 cut(s) | 160, 343, 838 |
| TspDTI | ATGAA | 2 cut(s) | 875, 1007 |
| TspRI | CASTG | 5 cut(s) | 352, 381, 447, 762, 832 |
| VneI | GTGCAC | 1 cut(s) | 582 |
| VpaK11BI | GGWCC | 3 cut(s) | 455, 805, 1036 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1043 |
| XapI | RAATTY | 1 cut(s) | 962 |
| XhoI | CTCGAG | 1 cut(s) | 540 |
| XmiI | GTMKAC | 1 cut(s) | 790 |
| XspI | CTAG | 3 cut(s) | 510, 579, 822 |
| Zsp2I | ATGCAT | 1 cut(s) | 913 |