FvH4_7g18611

Domain of unknown function (DUF4283)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
OG0000044
Physical Location & Seq
Reverse (-)
15495838 .. 15497178
1341 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g18611.t1

Sequence Viewer

Length: 1197 bp
ATGGCTGTTCAGCATCGTCCCTTCTGCCCGTGGTCTTTTCTCGACGAGGGGGCTGCGAAGCCGACGAAATCTTATGCGGCGGCGGCGGCGCAAGCTTTCATCCCAATTGATGATCTACCTATTCCTGAGATTTTAGATGGCAAGACAACTGTTACTATTTCAGAAGAGGGCTATCAATCGGGTTTGGATAATTGTAAACATATGTTAATCGGAAGGGTGCAATTGGGTTTGAGGGATAAACCCTACTCTGCATCAGATCTGTCTCATAAGCTTTCTCTTCTTTGGGGAAGTCTAGGGGCTTGGAAGATTATTCCCATGGGAAAAGGTTATTTCACGTTTAGCTTCTCTACGGATGAGGATCTCTCTACAGTCTGGGTAAAGGGTGCAATTGCTCTCAAGCCTGGCTTCTTGCGTTTCATGCGATGGGTTCCAAATTTCTCCCCAGCGAATCAACGTAATACTAATGCTCAGACTGTGGATTATGAGAAGCTTCCACATATTTGTGCTCATTGTGGCAACGTTGGGCACCTTGTCACAGCTTGCAAGTATGTGCATAGATCTTCTGACCCGGTTCCAATGGATAATGAGACTGAGAAAGGCAGAGGTCGATCGCGCAAGCGTAGTAGACGATCTCGCAGGAACCGTGATCAGCAACGAGTCTCCAAAGTGTATGTGCCTAAAAACCCATCTAATCCAGCAGATCGAGGTAAGAGCATGATTATTGATTCAACTCCAAACCCCAGGGAAGATTTTGGTGAGGGTCCTTCCTTTGTGCAGAAGTCTCCAGCACCGGTCGGCCAACTAGTGATATCTAGTGTTGTGCCGGAACCGCTAGTGGAAGTGGTGGCACCTGTCCAAGAAGTGGTTGAGCCGGGGGTGAATGTGGTTTTGGTACCAGTAGCTATCCATGGTAATGTGGTTGAGCAAGAAGATGATACTAGGTATGCAATTGATCAGAACGAGCAGAATAGTGAAGATGACTCTGCCGGTGGTAGTATGCATGAGCAGTCTTCTGACATTGGGGTTGCTGTTGCTGCAAATTCAGTAACTCGAATTGATAGCTGGTATGAGGAGACAGAACGAGTTGACATTGATGATGGTTTTACTGTTGTTATGTCCAGGTCTCAAAAGAGGAAGGCTGCTTCGAAGGAGAATAGGGAAGCCTATCTCCGTCGCTCCAAAGACACTCCTAAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4283 zf-CCHC_4

Protein Analysis

399

Amino Acids

44.08

Weight (kDa)

6.77

Isoelectric Point (pI)

52.67

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF4283 PF14111 63 - 149 4.8e-11 Domain of unknown function (DUF4283)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000044)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G07760 AT5G28823
fragaria_vesca FvH4_1g13572 FvH4_2g03281 FvH4_2g04691 FvH4_2g08332 FvH4_2g08333 FvH4_2g15313 FvH4_2g26101 FvH4_2g29541 FvH4_3g06911 FvH4_3g34351 FvH4_3g43733 FvH4_4g02432 FvH4_4g05601 FvH4_4g08213 FvH4_4g09961 FvH4_4g10131 FvH4_4g20001 FvH4_4g20002 FvH4_5g01051 FvH4_5g01401 FvH4_5g27943 FvH4_6g09220 FvH4_6g17383 FvH4_6g35491 FvH4_6g46421 FvH4_7g04151 FvH4_7g13962 FvH4_7g18611 FvH4_7g19491 FvH4_7g19511 FvH4_7g26562
malus_domestica MD06G1221600.v1.1
pyrus_communis pycom10g21150
rosa_chinensis RchiOBHm_Chr1g0337571 RchiOBHm_Chr2g0168771 RchiOBHm_Chr3g0453631 RchiOBHm_Chr6g0278581
rosa_laevigata RLG00000001899 RLG00000001925 RLG00000002026 RLG00000003410 RLG00000003767 RLG00000004304 RLG00000004473 RLG00000004677 RLG00000006856 RLG00000007994 RLG00000009888 RLG00000011627 RLG00000012174 RLG00000012217 RLG00000013118 RLG00000013736 RLG00000014194 RLG00000014251 RLG00000015011 RLG00000015057 RLG00000015235 RLG00000017416 RLG00000018052 RLG00000018537 RLG00000019968 RLG00000020096 RLG00000020263 RLG00000022606 RLG00000023119 RLG00000028111 RLG00000029686 RLG00000030126 RLG00000031124 RLG00000031236 RLG00000032766 RLG00000033171 RLG00000033548 RLG00000033987 RLG00000034062 RLG00000035115 RLG00000035863
rosa_multiflora Rmu_co8036712.1_g000001 Rmu_co8080248.1_g000001 Rmu_co8208334.1_g000001 Rmu_co8253451.1_g000001 Rmu_co8393241.1_g000001 Rmu_co8522225.1_g000005 Rmu_sc0000060.1_g000030 Rmu_sc0000060.1_g000031 Rmu_sc0000060.1_g000032 Rmu_sc0000090.1_g000008 Rmu_sc0000149.1_g000051 Rmu_sc0000149.1_g000058 Rmu_sc0000309.1_g000050 Rmu_sc0000370.1_g000022 Rmu_sc0000370.1_g000023 Rmu_sc0000370.1_g000024 Rmu_sc0000418.1_g000018 Rmu_sc0000427.1_g000014 Rmu_sc0000427.1_g000015 Rmu_sc0000434.1_g000008 Rmu_sc0000487.1_g000038 Rmu_sc0000487.1_g000039 Rmu_sc0000569.1_g000029 Rmu_sc0000580.1_g000097 Rmu_sc0000595.1_g000068 Rmu_sc0000607.1_g000027 Rmu_sc0000738.1_g000004 Rmu_sc0000758.1_g000001 Rmu_sc0000758.1_g000002 Rmu_sc0000870.1_g000019 Rmu_sc0000924.1_g000040 Rmu_sc0000924.1_g000041 Rmu_sc0000999.1_g000037 Rmu_sc0001001.1_g000001 Rmu_sc0001010.1_g000080 Rmu_sc0001075.1_g000041 Rmu_sc0001097.1_g000016 Rmu_sc0001173.1_g000020 Rmu_sc0001258.1_g000010 Rmu_sc0001425.1_g000031 Rmu_sc0001493.1_g000020 Rmu_sc0001493.1_g000021 Rmu_sc0001644.1_g000024 Rmu_sc0001648.1_g000039 Rmu_sc0001662.1_g000002 Rmu_sc0001849.1_g000046 Rmu_sc0001851.1_g000038 Rmu_sc0001861.1_g000006 Rmu_sc0001899.1_g000008 Rmu_sc0002231.1_g000023 Rmu_sc0002393.1_g000012 Rmu_sc0002515.1_g000010 Rmu_sc0002551.1_g000013 Rmu_sc0002680.1_g000029 Rmu_sc0002700.1_g000030 Rmu_sc0002700.1_g000031 Rmu_sc0002709.1_g000035 Rmu_sc0002779.1_g000017 Rmu_sc0003267.1_g000040 Rmu_sc0003306.1_g000009 Rmu_sc0003338.1_g000014 Rmu_sc0003522.1_g000038 Rmu_sc0003522.1_g000039 Rmu_sc0003653.1_g000031 Rmu_sc0003901.1_g000003 Rmu_sc0003920.1_g000009 Rmu_sc0004014.1_g000009 Rmu_sc0004016.1_g000013 Rmu_sc0004031.1_g000002 Rmu_sc0004106.1_g000001 Rmu_sc0004432.1_g000004 Rmu_sc0004481.1_g000020 Rmu_sc0004874.1_g000005 Rmu_sc0004928.1_g000005 Rmu_sc0005065.1_g000053 Rmu_sc0005091.1_g000005 Rmu_sc0005217.1_g000015 Rmu_sc0005242.1_g000002 Rmu_sc0005300.1_g000011 Rmu_sc0005400.1_g000004 Rmu_sc0005486.1_g000007 Rmu_sc0005527.1_g000015 Rmu_sc0006059.1_g000021 Rmu_sc0006087.1_g000004 Rmu_sc0006184.1_g000006 Rmu_sc0006184.1_g000007 Rmu_sc0006578.1_g000006 Rmu_sc0006730.1_g000010 Rmu_sc0006736.1_g000030 Rmu_sc0006736.1_g000033 Rmu_sc0007333.1_g000018 Rmu_sc0007856.1_g000010 Rmu_sc0008231.1_g000003 Rmu_sc0009862.1_g000012 Rmu_sc0010547.1_g000001 Rmu_sc0010547.1_g000003 Rmu_sc0010632.1_g000012 Rmu_sc0010747.1_g000008 Rmu_sc0011075.1_g000009 Rmu_sc0011565.1_g000004 Rmu_sc0011641.1_g000003 Rmu_sc0013102.1_g000013 Rmu_sc0013160.1_g000006 Rmu_sc0014846.1_g000004 Rmu_sc0017037.1_g000003 Rmu_sc0018203.1_g000001 Rmu_sc0018204.1_g000001 Rmu_sc0018348.1_g000001 Rmu_sc0019354.1_g000002 Rmu_sc0021630.1_g000002 Rmu_sc0022987.1_g000002 Rmu_sc0024469.1_g000005 Rmu_sc0033519.1_g000001 Rmu_sc0033519.1_g000002 Rmu_sc0033519.1_g000003 Rmu_sc0042775.1_g000001 Rmu_ssc0000110.1_g000003 Rmu_ssc0000110.1_g000004 Rmu_ssc0000126.1_g000068 Rmu_ssc0000200.1_g000007 Rmu_ssc0000295.1_g000003 Rmu_ssc0000295.1_g000004 Rmu_ssc0000299.1_g000010 Rmu_ssc0000308.1_g000024 Rmu_ssc0000339.1_g000006 Rmu_ssc0000385.1_g000012 Rmu_ssc0000409.1_g000004 Rmu_ssc0000421.1_g000004
rosa_roxburghii Rroxscaffold_156G00440360 Rroxscaffold_166G00440800 Rroxscaffold_1G00039040 Rroxscaffold_1G00039050 Rroxscaffold_1G00073950 Rroxscaffold_2G00091710 Rroxscaffold_2G00120050 Rroxscaffold_2G00122590 Rroxscaffold_3G00219700 Rroxscaffold_3G00264140 Rroxscaffold_4G00290600 Rroxscaffold_4G00323610 Rroxscaffold_4G00328460 Rroxscaffold_5G00343440 Rroxscaffold_5G00343570 Rroxscaffold_5G00378540 Rroxscaffold_5G00385090 Rroxscaffold_7G00169130 Rroxscaffold_7G00216420
rosa_rugosa Rorug01G0065800 Rorug01G0073500 Rorug01G0091700 Rorug01G0096500 Rorug01G0204700.1 Rorug01G0249100 Rorug01G0333800 Rorug01G0333900 Rorug01G0339500 Rorug01G0431300 Rorug02G0085400 Rorug02G0117500 Rorug02G0130900 Rorug02G0178800 Rorug02G0226700 Rorug02G0336300 Rorug02G0338700 Rorug02G0351400 Rorug02G0459900 Rorug03G0187000 Rorug03G0223700 Rorug03G0291300 Rorug03G0291300 Rorug03G0311100 Rorug03G0316900 Rorug03G0346000 Rorug04G0014500 Rorug04G0014600 Rorug04G0124100 Rorug04G0136500 Rorug04G0302000 Rorug04G0338100 Rorug04G0338200 Rorug04G0413100 Rorug05G0182200 Rorug05G0226500 Rorug05G0273300 Rorug05G0292200 Rorug05G0292200 Rorug05G0392500 Rorug05G0394500 Rorug05G0394600 Rorug05G0505600.1 Rorug06G0351400 Rorug06G0393400 Rorug06G0393600 Rorug06G0470000 Rorug07G0063100 Rorug07G0086800 Rorug07G0109200 Rorug07G0236100
rosa_samantha Rh1AG010800 Rh1AG011100 Rh1AG064900 Rh1AG088000 Rh1AG207100 Rh1AG262000 Rh1AG300800 Rh1BG043000 Rh1BG144600 Rh1BG180700 Rh1BG180800 Rh1BG328800 Rh1BG399400 Rh1CG041400 Rh1CG047300 Rh1CG379700 Rh1DG036500 Rh1DG083000 Rh1DG210700 Rh1DG210800 Rh1DG231100 Rh2AG007900 Rh2AG055500 Rh2AG339100 Rh2AG368100 Rh2BG243300 Rh2BG258900 Rh2BG292000 Rh2BG333500 Rh2BG387300 Rh2BG612800 Rh2BG619100 Rh2CG026500 Rh2CG163600 Rh2CG535700 Rh2DG186400 Rh2DG235000 Rh2DG314500 Rh2DG388500 Rh2DG391400 Rh2DG496900 Rh2DG526700 Rh2DG570700 Rh3AG330700 Rh3BG266900 Rh3CG236000 Rh3CG340400 Rh3DG090000 Rh3DG278400 Rh3DG297600 Rh3DG362600 Rh4AG001300 Rh4AG023300 Rh4AG097100 Rh4AG427000 Rh4BG029400 Rh4BG032400 Rh4BG086000 Rh4BG249200 Rh4CG001900 Rh4CG040600 Rh4CG093000 Rh4CG106300 Rh4CG113200 Rh4CG113900 Rh4DG002300 Rh4DG144400 Rh4DG234200 Rh5AG043700 Rh5AG084900 Rh5AG161500 Rh5AG409000 Rh5AG457200 Rh5AG457900 Rh5AG473700 Rh5AG520600 Rh5BG042100 Rh5BG124100 Rh5BG323500 Rh5BG417200 Rh5BG443700 Rh5BG451500 Rh5BG464900 Rh5BG470400 Rh5BG522500 Rh5CG068800 Rh5CG178300 Rh5CG231000 Rh5CG258600 Rh5CG394500 Rh5CG473700 Rh5DG164700 Rh5DG235400 Rh5DG261300 Rh5DG304900 Rh5DG334500 Rh5DG424300 Rh5DG458400 Rh5DG478600 Rh5DG552300 Rh5DG552700 Rh6AG037000 Rh6AG042100 Rh6AG255500 Rh6AG283400 Rh6AG291800 Rh6BG049600 Rh6BG080700 Rh6BG114600 Rh6BG128900 Rh6BG352500 Rh6CG052400 Rh6CG112900 Rh6CG113000 Rh6CG131300 Rh6CG157700 Rh6CG243200 Rh6CG254100 Rh6CG275700 Rh6CG299700 Rh6CG309100 Rh6CG317600 Rh6CG342600 Rh6CG471900 Rh6DG038200 Rh6DG102300 Rh6DG114400 Rh6DG225900 Rh6DG292900 Rh6DG320700 Rh6DG512800 Rh7AG217700 Rh7AG313900 Rh7AG446000 Rh7AG472600 Rh7BG223100 Rh7BG349900 Rh7BG352000 Rh7CG160200 Rh7CG233900 Rh7CG242700 Rh7CG273900 Rh7CG306400 Rh7CG322200 Rh7DG053800 Rh7DG077800 Rh7DG227700 Rh7DG404800
rosa_wichuraiana Rw0G003990 Rw2G022110 Rw2G024890 Rw6G005700 Rw7G008770

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 892
AccB1I GGYRCC 3 cut(s) 525, 847, 892
AccB7I CCANNNNNTGG 1 cut(s) 862
AccI GTMKAC 1 cut(s) 625
AccII CGCG 1 cut(s) 613
AciI CCGC 5 cut(s) 77, 80, 83, 86, 830
AclI AACGTT 1 cut(s) 519
AclWI GGATC 1 cut(s) 366
AcoI YGGCCR 1 cut(s) 796
AcsI RAATTY 2 cut(s) 433, 1039
AfaI GTAC 1 cut(s) 894
AfiI CCNNNNNNNGG 1 cut(s) 862
AgeI ACCGGT 1 cut(s) 790
AgsI TTSAA 1 cut(s) 729
AhlI ACTAGT 1 cut(s) 802
AjnI CCWGG 3 cut(s) 400, 740, 1118
AjuI GAANNNNNNNTTGG 2 cut(s) 872, 904
AluBI AGCT 7 cut(s) 95, 271, 342, 490, 539, 902, 1062
AluI AGCT 7 cut(s) 95, 271, 342, 490, 539, 902, 1062
Alw21I GWGCWC 1 cut(s) 508
Alw26I GTCTC 6 cut(s) 267, 581, 664, 786, 1067, 1128
AlwI GGATC 1 cut(s) 366
AoxI GGCC 1 cut(s) 796
ApeKI GCWGC 3 cut(s) 53, 1034, 1139
ApoI RAATTY 2 cut(s) 433, 1039
AsiGI ACCGGT 1 cut(s) 790
Asp718I GGTACC 1 cut(s) 892
AspLEI GCGC 2 cut(s) 91, 615
AspS9I GGNCC 1 cut(s) 761
AsuC2I CCSGG 2 cut(s) 569, 873
AsuHPI GGTGA 2 cut(s) 767, 889
AsuII TTCGAA 1 cut(s) 1145
AvaII GGWCC 1 cut(s) 761
BaeGI GKGCMC 1 cut(s) 528
BanI GGYRCC 3 cut(s) 525, 847, 892
BbsI GAAGAC 1 cut(s) 1002
Bbv12I GWGCWC 1 cut(s) 508
BbvI GCAGC 3 cut(s) 40, 1021, 1126
BccI CCATC 4 cut(s) 131, 417, 694, 1091
BcgI CGANNNNNNTGC 2 cut(s) 35, 69
BciT130I CCWGG 3 cut(s) 402, 742, 1120
BclI TGATCA 2 cut(s) 646, 952
BcnI CCSGG 2 cut(s) 569, 873
BcoDI GTCTC 6 cut(s) 267, 581, 664, 786, 1067, 1128
BcuI ACTAGT 1 cut(s) 802
BfaI CTAG 5 cut(s) 293, 803, 813, 833, 939
BfmI CTRYAG 1 cut(s) 366
BglII AGATCT 2 cut(s) 256, 557
BisI GCNGC 7 cut(s) 54, 78, 81, 84, 87, 1035, 1140
BlsI GCNGC 7 cut(s) 55, 79, 82, 85, 88, 1036, 1141
Bme1390I CCNGG 5 cut(s) 402, 569, 742, 873, 1120
Bme18I GGWCC 1 cut(s) 761
BmgT120I GGNCC 1 cut(s) 761
BmiI GGNNCC 8 cut(s) 429, 527, 573, 641, 762, 828, 849, 894
BmrFI CCNGG 5 cut(s) 402, 569, 742, 873, 1120
BmsI GCATC 2 cut(s) 22, 260
BpiI GAAGAC 1 cut(s) 1002
BplI GAGNNNNNCTC 2 cut(s) 347, 379
BpmI CTGGAG 1 cut(s) 768
Bpu14I TTCGAA 1 cut(s) 1145
BpuEI CTTGAG 1 cut(s) 380
BpuMI CCSGG 2 cut(s) 569, 873
BsaBI GATNNNNATC 1 cut(s) 357
BsaI GGTCTC 1 cut(s) 1128
BsaJI CCNNGG 6 cut(s) 29, 315, 740, 741, 872, 907
BsaWI WCCGGW 1 cut(s) 790
Bsc4I CCNNNNNNNGG 1 cut(s) 862
Bse118I RCCGGY 2 cut(s) 790, 986
Bse1I ACTGG 1 cut(s) 896
Bse8I GATNNNNATC 1 cut(s) 357
BseBI CCWGG 3 cut(s) 402, 742, 1120
BseDI CCNNGG 6 cut(s) 29, 315, 740, 741, 872, 907
BseGI GGATG 2 cut(s) 99, 358
BseJI GATNNNNATC 1 cut(s) 357
BseLI CCNNNNNNNGG 1 cut(s) 862
BseMII CTCAG 3 cut(s) 117, 482, 582
BseNI ACTGG 1 cut(s) 896
BseRI GAGGAG 1 cut(s) 1085
BseSI GKGCMC 1 cut(s) 528
BseXI GCAGC 3 cut(s) 40, 1021, 1126
BseYI CCCAGC 1 cut(s) 442
BsgI GTGCAG 1 cut(s) 794
Bsh1236I CGCG 1 cut(s) 613
Bsh1285I CGRYCG 2 cut(s) 611, 795
BshFI GGCC 1 cut(s) 798
BshNI GGYRCC 3 cut(s) 525, 847, 892
BshTI ACCGGT 1 cut(s) 790
BsiEI CGRYCG 2 cut(s) 611, 795
BsiHKAI GWGCWC 1 cut(s) 508
BsiSI CCGG 5 cut(s) 569, 791, 824, 872, 987
BslFI GGGAC 1 cut(s) 3
BslI CCNNNNNNNGG 1 cut(s) 862
BsmAI GTCTC 6 cut(s) 267, 581, 664, 786, 1067, 1128
BsmFI GGGAC 1 cut(s) 3
BsnI GGCC 1 cut(s) 798
Bso31I GGTCTC 1 cut(s) 1128
Bsp119I TTCGAA 1 cut(s) 1145
Bsp1286I GDGCHC 2 cut(s) 508, 528
Bsp143I GATC 9 cut(s) 112, 256, 358, 557, 608, 629, 646, 700, 952
Bsp19I CCATGG 2 cut(s) 315, 907
BspACI CCGC 5 cut(s) 77, 80, 83, 86, 830
BspANI GGCC 1 cut(s) 798
BspCNI CTCAG 3 cut(s) 118, 481, 583
BspFNI CGCG 1 cut(s) 613
BspLI GGNNCC 8 cut(s) 429, 527, 573, 641, 762, 828, 849, 894
BspPI GGATC 1 cut(s) 366
BspT104I TTCGAA 1 cut(s) 1145
BspT107I GGYRCC 3 cut(s) 525, 847, 892
BspTNI GGTCTC 1 cut(s) 1128
BsrFI RCCGGY 2 cut(s) 790, 986
BsrI ACTGG 1 cut(s) 896
BssAI RCCGGY 2 cut(s) 790, 986
BssECI CCNNGG 6 cut(s) 29, 315, 740, 741, 872, 907
BssMI GATC 9 cut(s) 112, 256, 358, 557, 608, 629, 646, 700, 952
BssT1I CCWWGG 2 cut(s) 315, 907
Bst2UI CCWGG 3 cut(s) 402, 742, 1120
Bst4CI ACNGT 5 cut(s) 151, 370, 475, 644, 1108
Bst6I CTCTTC 2 cut(s) 159, 282
BstBI TTCGAA 1 cut(s) 1145
BstC8I GCNNGC 3 cut(s) 93, 541, 617
BstDEI CTNAG 3 cut(s) 126, 468, 591
BstDSI CCRYGG 3 cut(s) 29, 315, 907
BstF5I GGATG 2 cut(s) 99, 358
BstFNI CGCG 1 cut(s) 613
BstHHI GCGC 2 cut(s) 91, 615
BstKTI GATC 9 cut(s) 115, 259, 361, 560, 611, 632, 649, 703, 955
BstMAI GTCTC 6 cut(s) 267, 581, 664, 786, 1067, 1128
BstMBI GATC 9 cut(s) 112, 256, 358, 557, 608, 629, 646, 700, 952
BstMCI CGRYCG 2 cut(s) 611, 795
BstMWI GCNNNNNNNGC 6 cut(s) 83, 86, 92, 418, 829, 1034
BstNI CCWGG 3 cut(s) 402, 742, 1120
BstSCI CCNGG 5 cut(s) 400, 567, 740, 871, 1118
BstSFI CTRYAG 1 cut(s) 366
BstSLI GKGCMC 1 cut(s) 528
BstUI CGCG 1 cut(s) 613
BstV1I GCAGC 3 cut(s) 40, 1021, 1126
BstV2I GAAGAC 1 cut(s) 1002
BstX2I RGATCY 3 cut(s) 256, 358, 557
BstYI RGATCY 3 cut(s) 256, 358, 557
BsuRI GGCC 1 cut(s) 798
BtgI CCRYGG 3 cut(s) 29, 315, 907
BtgZI GCGATG 1 cut(s) 436
BtsCI GGATG 2 cut(s) 99, 358
Cac8I GCNNGC 3 cut(s) 93, 541, 617
CfoI GCGC 2 cut(s) 91, 615
Cfr10I RCCGGY 2 cut(s) 790, 986
Cfr13I GGNCC 1 cut(s) 761
Csp6I GTAC 1 cut(s) 893
CspAI ACCGGT 1 cut(s) 790
CviAII CATG 5 cut(s) 316, 418, 715, 908, 1001
CviQI GTAC 1 cut(s) 893
DdeI CTNAG 3 cut(s) 126, 468, 591
DpnI GATC 9 cut(s) 114, 258, 360, 559, 610, 631, 648, 702, 954
DpnII GATC 9 cut(s) 112, 256, 358, 557, 608, 629, 646, 700, 952
EaeI YGGCCR 1 cut(s) 796
Eam1104I CTCTTC 2 cut(s) 159, 282
EarI CTCTTC 2 cut(s) 159, 282
Eco130I CCWWGG 2 cut(s) 315, 907
Eco31I GGTCTC 1 cut(s) 1128
Eco32I GATATC 1 cut(s) 810
Eco47I GGWCC 1 cut(s) 761
EcoO109I RGGNCCY 1 cut(s) 761
EcoRII CCWGG 3 cut(s) 400, 740, 1118
EcoRV GATATC 1 cut(s) 810
EcoT14I CCWWGG 2 cut(s) 315, 907
EcoT22I ATGCAT 1 cut(s) 1002
ErhI CCWWGG 2 cut(s) 315, 907
FaeI CATG 5 cut(s) 319, 421, 718, 911, 1004
FalI AAGNNNNNCTT 2 cut(s) 389, 421
FaqI GGGAC 1 cut(s) 3
FatI CATG 5 cut(s) 315, 417, 714, 907, 1000
FauNDI CATATG 1 cut(s) 201
FbaI TGATCA 2 cut(s) 646, 952
FblI GTMKAC 1 cut(s) 625
Fnu4HI GCNGC 7 cut(s) 54, 78, 81, 84, 87, 1035, 1140
FokI GGATG 2 cut(s) 86, 365
Fsp4HI GCNGC 7 cut(s) 54, 78, 81, 84, 87, 1035, 1140
FspBI CTAG 5 cut(s) 293, 803, 813, 833, 939
GlaI GCGC 2 cut(s) 90, 614
GluI GCNGC 7 cut(s) 54, 78, 81, 84, 87, 1035, 1140
GsaI CCCAGC 1 cut(s) 446
GsuI CTGGAG 1 cut(s) 768
HaeIII GGCC 1 cut(s) 798
HapII CCGG 5 cut(s) 569, 791, 824, 872, 987
HhaI GCGC 2 cut(s) 91, 615
Hin1II CATG 5 cut(s) 319, 421, 718, 911, 1004
Hin6I GCGC 2 cut(s) 89, 613
HinP1I GCGC 2 cut(s) 89, 613
HincII GTYRAC 1 cut(s) 1087
HindII GTYRAC 1 cut(s) 1087
HindIII AAGCTT 3 cut(s) 93, 269, 488
HinfI GANTC 4 cut(s) 448, 657, 725, 980
HpaII CCGG 5 cut(s) 569, 791, 824, 872, 987
HphI GGTGA 2 cut(s) 767, 889
Hpy166II GTNNAC 3 cut(s) 197, 626, 1087
Hpy188I TCNGA 7 cut(s) 163, 212, 256, 471, 565, 957, 1015
Hpy188III TCNNGA 2 cut(s) 41, 125
Hpy8I GTNNAC 3 cut(s) 197, 626, 1087
Hpy99I CGWCG 3 cut(s) 47, 67, 1176
HpyAV CCTTC 5 cut(s) 31, 207, 774, 1129, 1141
HpyCH4III ACNGT 5 cut(s) 151, 370, 475, 644, 1108
HpyCH4IV ACGT 3 cut(s) 335, 454, 519
HpyCH4V TGCA 9 cut(s) 220, 251, 386, 543, 553, 775, 947, 1000, 1037
HpyF10VI GCNNNNNNNGC 6 cut(s) 83, 86, 92, 418, 829, 1034
HpyF3I CTNAG 3 cut(s) 126, 468, 591
HpySE526I ACGT 3 cut(s) 335, 454, 519
Hsp92II CATG 5 cut(s) 319, 421, 718, 911, 1004
HspAI GCGC 2 cut(s) 89, 613
KpnI GGTACC 1 cut(s) 896
Ksp22I TGATCA 2 cut(s) 646, 952
Kzo9I GATC 9 cut(s) 112, 256, 358, 557, 608, 629, 646, 700, 952
LmnI GCTCC 1 cut(s) 1181
Lsp1109I GCAGC 3 cut(s) 40, 1021, 1126
LweI GCATC 2 cut(s) 22, 260
MaeI CTAG 5 cut(s) 293, 803, 813, 833, 939
MaeII ACGT 3 cut(s) 335, 454, 519
MaeIII GTNAC 3 cut(s) 151, 532, 1045
MalI GATC 9 cut(s) 114, 258, 360, 559, 610, 631, 648, 702, 954
MboI GATC 9 cut(s) 112, 256, 358, 557, 608, 629, 646, 700, 952
MboII GAAGA 8 cut(s) 176, 269, 316, 552, 758, 941, 986, 1002
MfeI CAATTG 4 cut(s) 105, 221, 387, 948
MflI RGATCY 3 cut(s) 256, 358, 557
MhlI GDGCHC 2 cut(s) 508, 528
MluCI AATT 8 cut(s) 105, 190, 221, 387, 433, 948, 1039, 1053
MlyI GAGTC 2 cut(s) 666, 974
MnlI CCTC 9 cut(s) 40, 160, 225, 349, 596, 698, 751, 1063, 1125
Mph1103I ATGCAT 1 cut(s) 1002
MseI TTAA 1 cut(s) 206
MslI CAYNNNNRTG 2 cut(s) 501, 912
MspI CCGG 5 cut(s) 569, 791, 824, 872, 987
MspR9I CCNGG 5 cut(s) 402, 569, 742, 873, 1120
MunI CAATTG 4 cut(s) 105, 221, 387, 948
MvaI CCWGG 3 cut(s) 402, 742, 1120
MvnI CGCG 1 cut(s) 613
MwoI GCNNNNNNNGC 6 cut(s) 83, 86, 92, 418, 829, 1034
NciI CCSGG 2 cut(s) 569, 873
NcoI CCATGG 2 cut(s) 315, 907
NdeI CATATG 1 cut(s) 201
NdeII GATC 9 cut(s) 112, 256, 358, 557, 608, 629, 646, 700, 952
NlaIII CATG 5 cut(s) 319, 421, 718, 911, 1004
NlaIV GGNNCC 8 cut(s) 429, 527, 573, 641, 762, 828, 849, 894
NmuCI GTSAC 1 cut(s) 532
NsiI ATGCAT 1 cut(s) 1002
NspV TTCGAA 1 cut(s) 1145
PasI CCCWGGG 1 cut(s) 741
PcsI WCGNNNNNNNCGW 1 cut(s) 640
PfeI GAWTC 2 cut(s) 448, 725
PflMI CCANNNNNTGG 1 cut(s) 862
PinAI ACCGGT 1 cut(s) 790
PkrI GCNGC 7 cut(s) 55, 79, 82, 85, 88, 1036, 1141
Ple19I CGATCG 1 cut(s) 611
PleI GAGTC 2 cut(s) 665, 974
PpsI GAGTC 2 cut(s) 665, 974
PpuMI RGGWCCY 1 cut(s) 761
Psp1406I AACGTT 1 cut(s) 519
Psp5II RGGWCCY 1 cut(s) 761
Psp6I CCWGG 3 cut(s) 400, 740, 1118
PspFI CCCAGC 1 cut(s) 442
PspGI CCWGG 3 cut(s) 400, 740, 1118
PspN4I GGNNCC 8 cut(s) 429, 527, 573, 641, 762, 828, 849, 894
PspPI GGNCC 1 cut(s) 761
PspPPI RGGWCCY 1 cut(s) 761
PsuI RGATCY 3 cut(s) 256, 358, 557
PvuI CGATCG 1 cut(s) 611
RsaI GTAC 1 cut(s) 894
RsaNI GTAC 1 cut(s) 893
RseI CAYNNNNRTG 2 cut(s) 501, 912
SaqAI TTAA 1 cut(s) 206
SatI GCNGC 7 cut(s) 54, 78, 81, 84, 87, 1035, 1140
Sau3AI GATC 9 cut(s) 112, 256, 358, 557, 608, 629, 646, 700, 952
Sau96I GGNCC 1 cut(s) 761
SchI GAGTC 2 cut(s) 666, 974
ScrFI CCNGG 5 cut(s) 402, 569, 742, 873, 1120
SduI GDGCHC 2 cut(s) 508, 528
SfaNI GCATC 2 cut(s) 22, 260
SfcI CTRYAG 1 cut(s) 366
SfuI TTCGAA 1 cut(s) 1145
SinI GGWCC 1 cut(s) 761
SmiMI CAYNNNNRTG 2 cut(s) 501, 912
SmlI CTYRAG 1 cut(s) 395
SmoI CTYRAG 1 cut(s) 395
SpeI ACTAGT 1 cut(s) 802
Sse9I AATT 8 cut(s) 105, 190, 221, 387, 433, 948, 1039, 1053
SsiI CCGC 5 cut(s) 77, 80, 83, 86, 830
SspMI CTAG 5 cut(s) 293, 803, 813, 833, 939
StyD4I CCNGG 5 cut(s) 400, 567, 740, 871, 1118
StyI CCWWGG 2 cut(s) 315, 907
TaaI ACNGT 5 cut(s) 151, 370, 475, 644, 1108
TaiI ACGT 3 cut(s) 338, 457, 522
TaqI TCGA 5 cut(s) 42, 607, 703, 1051, 1145
TasI AATT 8 cut(s) 105, 190, 221, 387, 433, 948, 1039, 1053
TauI GCSGC 4 cut(s) 80, 83, 86, 89
TfiI GAWTC 2 cut(s) 448, 725
Tru1I TTAA 1 cut(s) 206
Tru9I TTAA 1 cut(s) 206
TseFI GTSAC 1 cut(s) 532
TseI GCWGC 3 cut(s) 53, 1034, 1139
Tsp45I GTSAC 1 cut(s) 532
TspDTI ATGAA 2 cut(s) 88, 406
TspGWI ACGGA 2 cut(s) 365, 1160
Van91I CCANNNNNTGG 1 cut(s) 862
VpaK11BI GGWCC 1 cut(s) 761
XapI RAATTY 2 cut(s) 433, 1039
XmiI GTMKAC 1 cut(s) 625
XspI CTAG 5 cut(s) 293, 803, 813, 833, 939
Zsp2I ATGCAT 1 cut(s) 1002
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.