Rmu_sc0000060.1_g000031

acid phosphatase activity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000060.1
OG0000044
Physical Location & Seq
Forward (+)
156637 .. 157929
1293 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000060.1_g000031.1.cds

Sequence Viewer

Length: 1293 bp
atggtacgttctcacaggcctgctattgtttgtctgtcggaaccttttgtgatgatttcttctatttcagtttctttctggagatctttgggtttagtcccttttgctactaataataggggatcacaggaccccaatatctggattctttgtcatgttgatttcagatttcaagtggtttcttcaactgagcagcagatcactatttctggctctttcgagggagtcagttgtattttgactacagtatatgctaaaacaataatatctggccgtcgtattctttggaatgagttggctggcattaaggagactattgttcatgggccatggcttgtctttggggaccttaattgcattttgggtgctcatgaaaaacgcggtggtaatgctccaagcgctacttcctgctatgagttccagcagatgtgcacaaattgcagtttacttgatattgagacaaaaggcctatcctacacgtggtctaatggcagaacaaatgtaagacttgatcgggctcttggaaatttggattggattgaggcttggccgcaacttgaatgccatactctaacaaaagctatttcagatcattgtcccctgcttattaccttctcaaagttactgagcattgctaaatctccttttcgctttcagcgcatgtggcttcaacaccaggacttcctttcaatggtaagagatttttgggaccaagttcatttctcagggtgtccaatgtttgtccttgcagctaagcttcgagctttaaaggggtttttaaaggactggaataggacgacttttggagatgtcaatcaaagagtggaggacactagagaggtgttggatggtattcaacatgaaatttctgctcagggtccttctcaggaattgttccaccgtgaggaggcagccaattctaattatcttcttgctctctccatgcaagatagtttcctccgtcacaaagctagaatccgatggttagttgatggtgacaggaatacatcctttcttcacaatatgatcaagattcggagactgcaaaaaccattggtgtctcttagggttggcaatgtgataattcaagaccaagtgctaattgcgagtagggttgttcaacactatactgaggcattcactaaagaccccagtgaattcactcctgtgatctccaaaaagacaaagaggcttaacaagcagtctgtcaaggcaaaggaaaagttgatgcagcgcaaacctgtaacaagtcgggctctcctaaataagggagccaaacatatctctttttaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RVT_1 RVT_3

Protein Analysis

430

Amino Acids

49.08

Weight (kDa)

9.52

Isoelectric Point (pI)

46.76

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000044)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G07760 AT5G28823
fragaria_vesca FvH4_1g13572 FvH4_2g03281 FvH4_2g04691 FvH4_2g08332 FvH4_2g08333 FvH4_2g15313 FvH4_2g26101 FvH4_2g29541 FvH4_3g06911 FvH4_3g34351 FvH4_3g43733 FvH4_4g02432 FvH4_4g05601 FvH4_4g08213 FvH4_4g09961 FvH4_4g10131 FvH4_4g20001 FvH4_4g20002 FvH4_5g01051 FvH4_5g01401 FvH4_5g27943 FvH4_6g09220 FvH4_6g17383 FvH4_6g35491 FvH4_6g46421 FvH4_7g04151 FvH4_7g13962 FvH4_7g18611 FvH4_7g19491 FvH4_7g19511 FvH4_7g26562
malus_domestica MD06G1221600.v1.1
pyrus_communis pycom10g21150
rosa_chinensis RchiOBHm_Chr1g0337571 RchiOBHm_Chr2g0168771 RchiOBHm_Chr3g0453631 RchiOBHm_Chr6g0278581
rosa_laevigata RLG00000001899 RLG00000001925 RLG00000002026 RLG00000003410 RLG00000003767 RLG00000004304 RLG00000004473 RLG00000004677 RLG00000006856 RLG00000007994 RLG00000009888 RLG00000011627 RLG00000012174 RLG00000012217 RLG00000013118 RLG00000013736 RLG00000014194 RLG00000014251 RLG00000015011 RLG00000015057 RLG00000015235 RLG00000017416 RLG00000018052 RLG00000018537 RLG00000019968 RLG00000020096 RLG00000020263 RLG00000022606 RLG00000023119 RLG00000028111 RLG00000029686 RLG00000030126 RLG00000031124 RLG00000031236 RLG00000032766 RLG00000033171 RLG00000033548 RLG00000033987 RLG00000034062 RLG00000035115 RLG00000035863
rosa_multiflora Rmu_co8036712.1_g000001 Rmu_co8080248.1_g000001 Rmu_co8208334.1_g000001 Rmu_co8253451.1_g000001 Rmu_co8393241.1_g000001 Rmu_co8522225.1_g000005 Rmu_sc0000060.1_g000030 Rmu_sc0000060.1_g000031 Rmu_sc0000060.1_g000032 Rmu_sc0000090.1_g000008 Rmu_sc0000149.1_g000051 Rmu_sc0000149.1_g000058 Rmu_sc0000309.1_g000050 Rmu_sc0000370.1_g000022 Rmu_sc0000370.1_g000023 Rmu_sc0000370.1_g000024 Rmu_sc0000418.1_g000018 Rmu_sc0000427.1_g000014 Rmu_sc0000427.1_g000015 Rmu_sc0000434.1_g000008 Rmu_sc0000487.1_g000038 Rmu_sc0000487.1_g000039 Rmu_sc0000569.1_g000029 Rmu_sc0000580.1_g000097 Rmu_sc0000595.1_g000068 Rmu_sc0000607.1_g000027 Rmu_sc0000738.1_g000004 Rmu_sc0000758.1_g000001 Rmu_sc0000758.1_g000002 Rmu_sc0000870.1_g000019 Rmu_sc0000924.1_g000040 Rmu_sc0000924.1_g000041 Rmu_sc0000999.1_g000037 Rmu_sc0001001.1_g000001 Rmu_sc0001010.1_g000080 Rmu_sc0001075.1_g000041 Rmu_sc0001097.1_g000016 Rmu_sc0001173.1_g000020 Rmu_sc0001258.1_g000010 Rmu_sc0001425.1_g000031 Rmu_sc0001493.1_g000020 Rmu_sc0001493.1_g000021 Rmu_sc0001644.1_g000024 Rmu_sc0001648.1_g000039 Rmu_sc0001662.1_g000002 Rmu_sc0001849.1_g000046 Rmu_sc0001851.1_g000038 Rmu_sc0001861.1_g000006 Rmu_sc0001899.1_g000008 Rmu_sc0002231.1_g000023 Rmu_sc0002393.1_g000012 Rmu_sc0002515.1_g000010 Rmu_sc0002551.1_g000013 Rmu_sc0002680.1_g000029 Rmu_sc0002700.1_g000030 Rmu_sc0002700.1_g000031 Rmu_sc0002709.1_g000035 Rmu_sc0002779.1_g000017 Rmu_sc0003267.1_g000040 Rmu_sc0003306.1_g000009 Rmu_sc0003338.1_g000014 Rmu_sc0003522.1_g000038 Rmu_sc0003522.1_g000039 Rmu_sc0003653.1_g000031 Rmu_sc0003901.1_g000003 Rmu_sc0003920.1_g000009 Rmu_sc0004014.1_g000009 Rmu_sc0004016.1_g000013 Rmu_sc0004031.1_g000002 Rmu_sc0004106.1_g000001 Rmu_sc0004432.1_g000004 Rmu_sc0004481.1_g000020 Rmu_sc0004874.1_g000005 Rmu_sc0004928.1_g000005 Rmu_sc0005065.1_g000053 Rmu_sc0005091.1_g000005 Rmu_sc0005217.1_g000015 Rmu_sc0005242.1_g000002 Rmu_sc0005300.1_g000011 Rmu_sc0005400.1_g000004 Rmu_sc0005486.1_g000007 Rmu_sc0005527.1_g000015 Rmu_sc0006059.1_g000021 Rmu_sc0006087.1_g000004 Rmu_sc0006184.1_g000006 Rmu_sc0006184.1_g000007 Rmu_sc0006578.1_g000006 Rmu_sc0006730.1_g000010 Rmu_sc0006736.1_g000030 Rmu_sc0006736.1_g000033 Rmu_sc0007333.1_g000018 Rmu_sc0007856.1_g000010 Rmu_sc0008231.1_g000003 Rmu_sc0009862.1_g000012 Rmu_sc0010547.1_g000001 Rmu_sc0010547.1_g000003 Rmu_sc0010632.1_g000012 Rmu_sc0010747.1_g000008 Rmu_sc0011075.1_g000009 Rmu_sc0011565.1_g000004 Rmu_sc0011641.1_g000003 Rmu_sc0013102.1_g000013 Rmu_sc0013160.1_g000006 Rmu_sc0014846.1_g000004 Rmu_sc0017037.1_g000003 Rmu_sc0018203.1_g000001 Rmu_sc0018204.1_g000001 Rmu_sc0018348.1_g000001 Rmu_sc0019354.1_g000002 Rmu_sc0021630.1_g000002 Rmu_sc0022987.1_g000002 Rmu_sc0024469.1_g000005 Rmu_sc0033519.1_g000001 Rmu_sc0033519.1_g000002 Rmu_sc0033519.1_g000003 Rmu_sc0042775.1_g000001 Rmu_ssc0000110.1_g000003 Rmu_ssc0000110.1_g000004 Rmu_ssc0000126.1_g000068 Rmu_ssc0000200.1_g000007 Rmu_ssc0000295.1_g000003 Rmu_ssc0000295.1_g000004 Rmu_ssc0000299.1_g000010 Rmu_ssc0000308.1_g000024 Rmu_ssc0000339.1_g000006 Rmu_ssc0000385.1_g000012 Rmu_ssc0000409.1_g000004 Rmu_ssc0000421.1_g000004
rosa_roxburghii Rroxscaffold_156G00440360 Rroxscaffold_166G00440800 Rroxscaffold_1G00039040 Rroxscaffold_1G00039050 Rroxscaffold_1G00073950 Rroxscaffold_2G00091710 Rroxscaffold_2G00120050 Rroxscaffold_2G00122590 Rroxscaffold_3G00219700 Rroxscaffold_3G00264140 Rroxscaffold_4G00290600 Rroxscaffold_4G00323610 Rroxscaffold_4G00328460 Rroxscaffold_5G00343440 Rroxscaffold_5G00343570 Rroxscaffold_5G00378540 Rroxscaffold_5G00385090 Rroxscaffold_7G00169130 Rroxscaffold_7G00216420
rosa_rugosa Rorug01G0065800 Rorug01G0073500 Rorug01G0091700 Rorug01G0096500 Rorug01G0204700.1 Rorug01G0249100 Rorug01G0333800 Rorug01G0333900 Rorug01G0339500 Rorug01G0431300 Rorug02G0085400 Rorug02G0117500 Rorug02G0130900 Rorug02G0178800 Rorug02G0226700 Rorug02G0336300 Rorug02G0338700 Rorug02G0351400 Rorug02G0459900 Rorug03G0187000 Rorug03G0223700 Rorug03G0291300 Rorug03G0291300 Rorug03G0311100 Rorug03G0316900 Rorug03G0346000 Rorug04G0014500 Rorug04G0014600 Rorug04G0124100 Rorug04G0136500 Rorug04G0302000 Rorug04G0338100 Rorug04G0338200 Rorug04G0413100 Rorug05G0182200 Rorug05G0226500 Rorug05G0273300 Rorug05G0292200 Rorug05G0292200 Rorug05G0392500 Rorug05G0394500 Rorug05G0394600 Rorug05G0505600.1 Rorug06G0351400 Rorug06G0393400 Rorug06G0393600 Rorug06G0470000 Rorug07G0063100 Rorug07G0086800 Rorug07G0109200 Rorug07G0236100
rosa_samantha Rh1AG010800 Rh1AG011100 Rh1AG064900 Rh1AG088000 Rh1AG207100 Rh1AG262000 Rh1AG300800 Rh1BG043000 Rh1BG144600 Rh1BG180700 Rh1BG180800 Rh1BG328800 Rh1BG399400 Rh1CG041400 Rh1CG047300 Rh1CG379700 Rh1DG036500 Rh1DG083000 Rh1DG210700 Rh1DG210800 Rh1DG231100 Rh2AG007900 Rh2AG055500 Rh2AG339100 Rh2AG368100 Rh2BG243300 Rh2BG258900 Rh2BG292000 Rh2BG333500 Rh2BG387300 Rh2BG612800 Rh2BG619100 Rh2CG026500 Rh2CG163600 Rh2CG535700 Rh2DG186400 Rh2DG235000 Rh2DG314500 Rh2DG388500 Rh2DG391400 Rh2DG496900 Rh2DG526700 Rh2DG570700 Rh3AG330700 Rh3BG266900 Rh3CG236000 Rh3CG340400 Rh3DG090000 Rh3DG278400 Rh3DG297600 Rh3DG362600 Rh4AG001300 Rh4AG023300 Rh4AG097100 Rh4AG427000 Rh4BG029400 Rh4BG032400 Rh4BG086000 Rh4BG249200 Rh4CG001900 Rh4CG040600 Rh4CG093000 Rh4CG106300 Rh4CG113200 Rh4CG113900 Rh4DG002300 Rh4DG144400 Rh4DG234200 Rh5AG043700 Rh5AG084900 Rh5AG161500 Rh5AG409000 Rh5AG457200 Rh5AG457900 Rh5AG473700 Rh5AG520600 Rh5BG042100 Rh5BG124100 Rh5BG323500 Rh5BG417200 Rh5BG443700 Rh5BG451500 Rh5BG464900 Rh5BG470400 Rh5BG522500 Rh5CG068800 Rh5CG178300 Rh5CG231000 Rh5CG258600 Rh5CG394500 Rh5CG473700 Rh5DG164700 Rh5DG235400 Rh5DG261300 Rh5DG304900 Rh5DG334500 Rh5DG424300 Rh5DG458400 Rh5DG478600 Rh5DG552300 Rh5DG552700 Rh6AG037000 Rh6AG042100 Rh6AG255500 Rh6AG283400 Rh6AG291800 Rh6BG049600 Rh6BG080700 Rh6BG114600 Rh6BG128900 Rh6BG352500 Rh6CG052400 Rh6CG112900 Rh6CG113000 Rh6CG131300 Rh6CG157700 Rh6CG243200 Rh6CG254100 Rh6CG275700 Rh6CG299700 Rh6CG309100 Rh6CG317600 Rh6CG342600 Rh6CG471900 Rh6DG038200 Rh6DG102300 Rh6DG114400 Rh6DG225900 Rh6DG292900 Rh6DG320700 Rh6DG512800 Rh7AG217700 Rh7AG313900 Rh7AG446000 Rh7AG472600 Rh7BG223100 Rh7BG349900 Rh7BG352000 Rh7CG160200 Rh7CG233900 Rh7CG242700 Rh7CG273900 Rh7CG306400 Rh7CG322200 Rh7DG053800 Rh7DG077800 Rh7DG227700 Rh7DG404800
rosa_wichuraiana Rw0G003990 Rw2G022110 Rw2G024890 Rw6G005700 Rw7G008770

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 141
AccII CGCG 1 cut(s) 381
AciI CCGC 2 cut(s) 381, 551
AclWI GGATC 1 cut(s) 130
AcoI YGGCCR 2 cut(s) 271, 548
AcsI RAATTY 3 cut(s) 526, 864, 1157
AcvI CACGTG 1 cut(s) 480
AfaI GTAC 1 cut(s) 6
AfeI AGCGCT 1 cut(s) 400
AfiI CCNNNNNNNGG 6 cut(s) 141, 480, 691, 904, 907, 1267
AflIII ACRYGT 1 cut(s) 477
AgsI TTSAA 8 cut(s) 173, 186, 560, 671, 690, 857, 1088, 1121
AjnI CCWGG 1 cut(s) 675
AjuI GAANNNNNNNTTGG 4 cut(s) 388, 420, 517, 549
AleI CACNNNNGTG 1 cut(s) 1166
AluBI AGCT 5 cut(s) 581, 752, 757, 764, 971
AluI AGCT 5 cut(s) 581, 752, 757, 764, 971
Alw21I GWGCWC 2 cut(s) 370, 434
Alw26I GTCTC 4 cut(s) 305, 452, 1033, 1065
Alw44I GTGCAC 1 cut(s) 430
AlwI GGATC 1 cut(s) 130
Aor51HI AGCGCT 1 cut(s) 400
AoxI GGCC 5 cut(s) 17, 271, 326, 466, 548
ApaLI GTGCAC 1 cut(s) 430
ApeKI GCWGC 4 cut(s) 193, 749, 911, 1231
ApoI RAATTY 3 cut(s) 526, 864, 1157
AspLEI GCGC 3 cut(s) 401, 660, 1236
AspS9I GGNCC 5 cut(s) 130, 326, 346, 709, 878
AsuHPI GGTGA 1 cut(s) 1007
AvaII GGWCC 4 cut(s) 130, 346, 709, 878
BaeGI GKGCMC 1 cut(s) 434
BanII GRGCYC 2 cut(s) 520, 1258
BbrPI CACGTG 1 cut(s) 480
Bbv12I GWGCWC 2 cut(s) 370, 434
BbvI GCAGC 4 cut(s) 205, 761, 923, 1243
BccI CCATC 3 cut(s) 842, 975, 986
BceAI ACGGC 1 cut(s) 258
BciT130I CCWGG 1 cut(s) 677
BclI TGATCA 1 cut(s) 1026
BcoDI GTCTC 4 cut(s) 305, 452, 1033, 1065
BfaI CTAG 2 cut(s) 834, 972
BfmI CTRYAG 1 cut(s) 243
BfoI RGCGCY 1 cut(s) 402
BglII AGATCT 1 cut(s) 83
BisI GCNGC 5 cut(s) 194, 551, 750, 912, 1232
BlpI GCTNAGC 1 cut(s) 753
BlsI GCNGC 5 cut(s) 195, 552, 751, 913, 1233
Bme1390I CCNGG 1 cut(s) 677
Bme18I GGWCC 4 cut(s) 130, 346, 709, 878
BmgT120I GGNCC 5 cut(s) 130, 326, 346, 709, 878
BmiI GGNNCC 6 cut(s) 42, 132, 347, 710, 879, 1273
BmrFI CCNGG 1 cut(s) 677
BmrI ACTGGG 1 cut(s) 1146
BmsI GCATC 1 cut(s) 1218
BmuI ACTGGG 1 cut(s) 1146
BpmI CTGGAG 1 cut(s) 100
Bpu10I CCTNAGC 1 cut(s) 873
Bpu1102I GCTNAGC 1 cut(s) 753
BsaAI YACGTR 1 cut(s) 480
BsaBI GATNNNNATC 1 cut(s) 813
BsaJI CCNNGG 1 cut(s) 329
Bsc4I CCNNNNNNNGG 6 cut(s) 141, 480, 691, 904, 907, 1267
Bse1I ACTGG 2 cut(s) 791, 1152
Bse3DI GCAATG 2 cut(s) 630, 1081
Bse8I GATNNNNATC 1 cut(s) 813
BseBI CCWGG 1 cut(s) 677
BseDI CCNNGG 1 cut(s) 329
BseGI GGATG 2 cut(s) 853, 1007
BseJI GATNNNNATC 1 cut(s) 813
BseLI CCNNNNNNNGG 6 cut(s) 141, 480, 691, 904, 907, 1267
BseMI GCAATG 2 cut(s) 630, 1081
BseMII CTCAG 6 cut(s) 180, 617, 738, 887, 899, 1122
BseNI ACTGG 2 cut(s) 791, 1152
BseRI GAGGAG 1 cut(s) 920
BseSI GKGCMC 1 cut(s) 434
BseXI GCAGC 4 cut(s) 205, 761, 923, 1243
Bsh1236I CGCG 1 cut(s) 381
BshFI GGCC 5 cut(s) 19, 273, 328, 468, 550
BsiHKAI GWGCWC 2 cut(s) 370, 434
BslFI GGGAC 4 cut(s) 83, 359, 582, 722
BslI CCNNNNNNNGG 6 cut(s) 141, 480, 691, 904, 907, 1267
BsmAI GTCTC 4 cut(s) 305, 452, 1033, 1065
BsmFI GGGAC 4 cut(s) 83, 359, 582, 722
BsmI GAATGC 2 cut(s) 566, 1136
BsnI GGCC 5 cut(s) 19, 273, 328, 468, 550
Bsp1286I GDGCHC 4 cut(s) 370, 434, 520, 1258
Bsp143I GATC 7 cut(s) 83, 122, 198, 511, 589, 1026, 1170
Bsp1720I GCTNAGC 1 cut(s) 753
Bsp19I CCATGG 1 cut(s) 329
BspACI CCGC 2 cut(s) 381, 551
BspANI GGCC 5 cut(s) 19, 273, 328, 468, 550
BspCNI CTCAG 6 cut(s) 181, 618, 737, 886, 898, 1123
BspFNI CGCG 1 cut(s) 381
BspHI TCATGA 1 cut(s) 370
BspLI GGNNCC 6 cut(s) 42, 132, 347, 710, 879, 1273
BspPI GGATC 1 cut(s) 130
BsrDI GCAATG 2 cut(s) 630, 1081
BsrI ACTGG 2 cut(s) 791, 1152
BssECI CCNNGG 1 cut(s) 329
BssMI GATC 7 cut(s) 83, 122, 198, 511, 589, 1026, 1170
BssT1I CCWWGG 1 cut(s) 329
Bst2UI CCWGG 1 cut(s) 677
Bst4CI ACNGT 2 cut(s) 247, 902
BstAPI GCANNNNNTGC 1 cut(s) 438
BstBAI YACGTR 1 cut(s) 480
BstC8I GCNNGC 2 cut(s) 21, 301
BstDEI CTNAG 8 cut(s) 189, 626, 724, 753, 873, 885, 1064, 1131
BstDSI CCRYGG 1 cut(s) 329
BstENI CCTNNNNNAGG 1 cut(s) 1265
BstF5I GGATG 2 cut(s) 853, 1007
BstFNI CGCG 1 cut(s) 381
BstH2I RGCGCY 1 cut(s) 402
BstHHI GCGC 3 cut(s) 401, 660, 1236
BstKTI GATC 7 cut(s) 86, 125, 201, 514, 592, 1029, 1173
BstMAI GTCTC 4 cut(s) 305, 452, 1033, 1065
BstMBI GATC 7 cut(s) 83, 122, 198, 511, 589, 1026, 1170
BstMWI GCNNNNNNNGC 5 cut(s) 398, 438, 657, 664, 1198
BstNI CCWGG 1 cut(s) 677
BstNSI RCATGY 1 cut(s) 664
BstSCI CCNGG 1 cut(s) 675
BstSFI CTRYAG 1 cut(s) 243
BstSLI GKGCMC 1 cut(s) 434
BstUI CGCG 1 cut(s) 381
BstV1I GCAGC 4 cut(s) 205, 761, 923, 1243
BstX2I RGATCY 1 cut(s) 83
BstYI RGATCY 1 cut(s) 83
BsuRI GGCC 5 cut(s) 19, 273, 328, 468, 550
BtgI CCRYGG 1 cut(s) 329
BtsCI GGATG 2 cut(s) 853, 1007
BtsIMutI CAGTG 1 cut(s) 1159
Cac8I GCNNGC 2 cut(s) 21, 301
CciI TCATGA 1 cut(s) 370
CfoI GCGC 3 cut(s) 401, 660, 1236
Cfr13I GGNCC 5 cut(s) 130, 326, 346, 709, 878
Csp6I GTAC 1 cut(s) 5
CviAII CATG 7 cut(s) 155, 323, 330, 371, 661, 860, 943
CviQI GTAC 1 cut(s) 5
DdeI CTNAG 8 cut(s) 189, 626, 724, 753, 873, 885, 1064, 1131
DpnI GATC 7 cut(s) 85, 124, 200, 513, 591, 1028, 1172
DpnII GATC 7 cut(s) 83, 122, 198, 511, 589, 1026, 1170
DraI TTTAAA 2 cut(s) 768, 780
EaeI YGGCCR 2 cut(s) 271, 548
Eco130I CCWWGG 1 cut(s) 329
Eco147I AGGCCT 2 cut(s) 19, 468
Eco24I GRGCYC 2 cut(s) 520, 1258
Eco47I GGWCC 4 cut(s) 130, 346, 709, 878
Eco47III AGCGCT 1 cut(s) 400
Eco72I CACGTG 1 cut(s) 480
EcoNI CCTNNNNNAGG 1 cut(s) 1265
EcoO109I RGGNCCY 3 cut(s) 130, 346, 878
EcoRI GAATTC 1 cut(s) 1157
EcoRII CCWGG 1 cut(s) 675
EcoT14I CCWWGG 1 cut(s) 329
EcoT38I GRGCYC 2 cut(s) 520, 1258
ErhI CCWWGG 1 cut(s) 329
FaeI CATG 7 cut(s) 158, 326, 333, 374, 664, 863, 946
FalI AAGNNNNNCTT 2 cut(s) 388, 420
FaqI GGGAC 4 cut(s) 83, 359, 582, 722
FatI CATG 7 cut(s) 154, 322, 329, 370, 660, 859, 942
FbaI TGATCA 1 cut(s) 1026
Fnu4HI GCNGC 5 cut(s) 194, 551, 750, 912, 1232
FokI GGATG 2 cut(s) 860, 994
FriOI GRGCYC 2 cut(s) 520, 1258
Fsp4HI GCNGC 5 cut(s) 194, 551, 750, 912, 1232
FspBI CTAG 2 cut(s) 834, 972
GlaI GCGC 3 cut(s) 400, 659, 1235
GluI GCNGC 5 cut(s) 194, 551, 750, 912, 1232
GsuI CTGGAG 1 cut(s) 100
HaeII RGCGCY 1 cut(s) 402
HaeIII GGCC 5 cut(s) 19, 273, 328, 468, 550
HhaI GCGC 3 cut(s) 401, 660, 1236
Hin1II CATG 7 cut(s) 158, 326, 333, 374, 664, 863, 946
Hin6I GCGC 3 cut(s) 399, 658, 1234
HinP1I GCGC 3 cut(s) 399, 658, 1234
HindIII AAGCTT 1 cut(s) 755
HinfI GANTC 4 cut(s) 145, 225, 975, 1033
HphI GGTGA 1 cut(s) 1007
Hpy166II GTNNAC 2 cut(s) 432, 446
Hpy188I TCNGA 5 cut(s) 40, 167, 589, 980, 1038
Hpy188III TCNNGA 6 cut(s) 79, 142, 371, 887, 1030, 1088
Hpy8I GTNNAC 2 cut(s) 432, 446
Hpy99I CGWCG 1 cut(s) 279
HpyAV CCTTC 2 cut(s) 622, 891
HpyCH4III ACNGT 2 cut(s) 247, 902
HpyCH4IV ACGT 2 cut(s) 7, 479
HpyCH4V TGCA 7 cut(s) 357, 432, 441, 749, 946, 1045, 1231
HpyF10VI GCNNNNNNNGC 5 cut(s) 398, 438, 657, 664, 1198
HpyF3I CTNAG 8 cut(s) 189, 626, 724, 753, 873, 885, 1064, 1131
HpySE526I ACGT 2 cut(s) 7, 479
Hsp92II CATG 7 cut(s) 158, 326, 333, 374, 664, 863, 946
HspAI GCGC 3 cut(s) 399, 658, 1234
Ksp22I TGATCA 1 cut(s) 1026
Kzo9I GATC 7 cut(s) 83, 122, 198, 511, 589, 1026, 1170
LmnI GCTCC 2 cut(s) 397, 1271
Lsp1109I GCAGC 4 cut(s) 205, 761, 923, 1243
LweI GCATC 1 cut(s) 1218
MaeI CTAG 2 cut(s) 834, 972
MaeII ACGT 2 cut(s) 7, 479
MaeIII GTNAC 4 cut(s) 621, 962, 995, 1243
MalI GATC 7 cut(s) 85, 124, 200, 513, 591, 1028, 1172
MboI GATC 7 cut(s) 83, 122, 198, 511, 589, 1026, 1170
MboII GAAGA 4 cut(s) 51, 174, 920, 1007
MflI RGATCY 1 cut(s) 83
MhlI GDGCHC 4 cut(s) 370, 434, 520, 1258
MlyI GAGTC 1 cut(s) 234
MmeI TCCRAC 2 cut(s) 18, 825
MnlI CCTC 9 cut(s) 214, 535, 820, 832, 898, 901, 968, 1126, 1182
MseI TTAA 6 cut(s) 306, 351, 767, 779, 1194, 1291
MslI CAYNNNNRTG 1 cut(s) 1166
MspR9I CCNGG 1 cut(s) 677
Mva1269I GAATGC 2 cut(s) 566, 1136
MvaI CCWGG 1 cut(s) 677
MvnI CGCG 1 cut(s) 381
MwoI GCNNNNNNNGC 5 cut(s) 398, 438, 657, 664, 1198
NcoI CCATGG 1 cut(s) 329
NdeII GATC 7 cut(s) 83, 122, 198, 511, 589, 1026, 1170
NlaIII CATG 7 cut(s) 158, 326, 333, 374, 664, 863, 946
NlaIV GGNNCC 6 cut(s) 42, 132, 347, 710, 879, 1273
NmuCI GTSAC 2 cut(s) 962, 995
NspI RCATGY 1 cut(s) 664
OliI CACNNNNGTG 1 cut(s) 1166
PagI TCATGA 1 cut(s) 370
PceI AGGCCT 2 cut(s) 19, 468
PctI GAATGC 2 cut(s) 566, 1136
PfeI GAWTC 3 cut(s) 145, 975, 1033
PflMI CCANNNNNTGG 1 cut(s) 141
PkrI GCNGC 5 cut(s) 195, 552, 751, 913, 1233
PleI GAGTC 1 cut(s) 233
PmaCI CACGTG 1 cut(s) 480
PmlI CACGTG 1 cut(s) 480
PpsI GAGTC 1 cut(s) 233
Ppu21I YACGTR 1 cut(s) 480
PpuMI RGGWCCY 3 cut(s) 130, 346, 878
Psp5II RGGWCCY 3 cut(s) 130, 346, 878
Psp6I CCWGG 1 cut(s) 675
PspCI CACGTG 1 cut(s) 480
PspGI CCWGG 1 cut(s) 675
PspN4I GGNNCC 6 cut(s) 42, 132, 347, 710, 879, 1273
PspPI GGNCC 5 cut(s) 130, 326, 346, 709, 878
PspPPI RGGWCCY 3 cut(s) 130, 346, 878
PsuI RGATCY 1 cut(s) 83
RsaI GTAC 1 cut(s) 6
RsaNI GTAC 1 cut(s) 5
RseI CAYNNNNRTG 1 cut(s) 1166
SaqAI TTAA 6 cut(s) 306, 351, 767, 779, 1194, 1291
SatI GCNGC 5 cut(s) 194, 551, 750, 912, 1232
Sau3AI GATC 7 cut(s) 83, 122, 198, 511, 589, 1026, 1170
Sau96I GGNCC 5 cut(s) 130, 326, 346, 709, 878
SchI GAGTC 1 cut(s) 234
ScrFI CCNGG 1 cut(s) 677
SduI GDGCHC 4 cut(s) 370, 434, 520, 1258
SfaNI GCATC 1 cut(s) 1218
SfcI CTRYAG 1 cut(s) 243
SinI GGWCC 4 cut(s) 130, 346, 709, 878
SmiMI CAYNNNNRTG 1 cut(s) 1166
SseBI AGGCCT 2 cut(s) 19, 468
SsiI CCGC 2 cut(s) 381, 551
SspMI CTAG 2 cut(s) 834, 972
StuI AGGCCT 2 cut(s) 19, 468
StyD4I CCNGG 1 cut(s) 675
StyI CCWWGG 1 cut(s) 329
TaaI ACNGT 2 cut(s) 247, 902
TaiI ACGT 2 cut(s) 10, 482
TaqI TCGA 2 cut(s) 219, 760
TauI GCSGC 1 cut(s) 553
TfiI GAWTC 3 cut(s) 145, 975, 1033
Tru1I TTAA 6 cut(s) 306, 351, 767, 779, 1194, 1291
Tru9I TTAA 6 cut(s) 306, 351, 767, 779, 1194, 1291
TscAI CASTG 1 cut(s) 1159
TseFI GTSAC 2 cut(s) 962, 995
TseI GCWGC 4 cut(s) 193, 749, 911, 1231
Tsp45I GTSAC 2 cut(s) 962, 995
TspDTI ATGAA 4 cut(s) 311, 387, 707, 876
TspGWI ACGGA 1 cut(s) 950
TspRI CASTG 1 cut(s) 1159
Van91I CCANNNNNTGG 1 cut(s) 141
VneI GTGCAC 1 cut(s) 430
VpaK11BI GGWCC 4 cut(s) 130, 346, 709, 878
XagI CCTNNNNNAGG 1 cut(s) 1265
XapI RAATTY 3 cut(s) 526, 864, 1157
XceI RCATGY 1 cut(s) 664
XspI CTAG 2 cut(s) 834, 972
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.