RLG00000033171

Domain of unknown function (DUF4283)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
OG0000044
Physical Location & Seq
Forward (+)
24043017 .. 24045018
2002 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000033171

Sequence Viewer

Length: 1194 bp
ATGTTGCGATTTCAGTCTATTGCTGATATGCAACAAGTATGGTCTCTTGGATCTATGAAGTTACAAACTGGTATCCTTCGTTTCATCAAATGGACGCCGCAATTCTCACCCGCTTCCTATAAGAATTCTTTTGTGCAAGTCTGGATACTTCTCTGGGACTTAAATGATGCTTATTGGGATCCACATACCCTTTTTGAGATTGCGAAAGGGGTAGGCATGCCTGTCAAGCTGGACCCTAGAACTGTTGATCGATTCGTAGGGTTATATGCAAGAGTTTTAGTGGATGTTAACTTTTCTAGGCCATTGTTGACCCAGCTACGAGTTACACGTGACTGTGGTGCCCCAATTGTTATTGGAGTGGAATATGAAACTATCCACAATGTTTGTCTTTCTTGTGAGAATATTGGTCATACAGCTTCCGGCTGCAGGGTGAAAATTAACAGTGAGGCTAGCTGGGCTCCCCTTACTGAGACACTGGGCAATGTTGATGCTTCAATTACAAGAGGTAGGTCGAAAACTAGGTCCAAACACACTCGGCGTAGAGCTGCTCGTTCAAACAAGAGATCTGCTTCTCAGGAACCAGCTTTGGAGGCAGTCATTGAGAATGTTGACAATGCTGCAAAGCCTGTAATTGTTACTCATTTTGTACCCAATGCGTCACACCCTGTGGAGCAAATTGACCTCTTACCTAATACTGGGGAAGCTGCTAAAGATCAGCATACTGAGCCCTGCAATTCTTCTTCTTCATTAAGTGTTCCTCCTGGTTTCCAGAAGCCTCTACAGCTGCCTAATATAGGGGCTTGCAACTCTAGCTCATCTCCTGTCATTGATAGCCTGGTTGCGGAAGCTTCTCAACCCGATTTTTCTGACAAAGAGTTTCTCCAATTTGTTCATTCCTGTCGCCCCCCATTCAGATTTCAGAATATGTGGCTCCAGCACCCGGGTTTTAATTATATGATACAAGATTTTTGGAGGCAATTGTCGTTTCATGGTTGCTCTATGTTCATCCTATTTGCCAAGCTTAGAGCGGTCAAACTGATGTTGAAGCAATGGAACAAGTCGCATTTCGGGGACATCAGCCTTAGGATTTATGACGCAAAAGCAAAGTTAGACTGCATTCAACAAGAACTATCTTCACTTAGGCCTTCTGCTGACCGTTTCAAATTAGAAGATGAAGCTCATGCGGATTACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4283 zf-CCHC_4

Protein Analysis

398

Amino Acids

44.82

Weight (kDa)

8.66

Isoelectric Point (pI)

50.65

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000044)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G07760 AT5G28823
fragaria_vesca FvH4_1g13572 FvH4_2g03281 FvH4_2g04691 FvH4_2g08332 FvH4_2g08333 FvH4_2g15313 FvH4_2g26101 FvH4_2g29541 FvH4_3g06911 FvH4_3g34351 FvH4_3g43733 FvH4_4g02432 FvH4_4g05601 FvH4_4g08213 FvH4_4g09961 FvH4_4g10131 FvH4_4g20001 FvH4_4g20002 FvH4_5g01051 FvH4_5g01401 FvH4_5g27943 FvH4_6g09220 FvH4_6g17383 FvH4_6g35491 FvH4_6g46421 FvH4_7g04151 FvH4_7g13962 FvH4_7g18611 FvH4_7g19491 FvH4_7g19511 FvH4_7g26562
malus_domestica MD06G1221600.v1.1
pyrus_communis pycom10g21150
rosa_chinensis RchiOBHm_Chr1g0337571 RchiOBHm_Chr2g0168771 RchiOBHm_Chr3g0453631 RchiOBHm_Chr6g0278581
rosa_laevigata RLG00000001899 RLG00000001925 RLG00000002026 RLG00000003410 RLG00000003767 RLG00000004304 RLG00000004473 RLG00000004677 RLG00000006856 RLG00000007994 RLG00000009888 RLG00000011627 RLG00000012174 RLG00000012217 RLG00000013118 RLG00000013736 RLG00000014194 RLG00000014251 RLG00000015011 RLG00000015057 RLG00000015235 RLG00000017416 RLG00000018052 RLG00000018537 RLG00000019968 RLG00000020096 RLG00000020263 RLG00000022606 RLG00000023119 RLG00000028111 RLG00000029686 RLG00000030126 RLG00000031124 RLG00000031236 RLG00000032766 RLG00000033171 RLG00000033548 RLG00000033987 RLG00000034062 RLG00000035115 RLG00000035863
rosa_multiflora Rmu_co8036712.1_g000001 Rmu_co8080248.1_g000001 Rmu_co8208334.1_g000001 Rmu_co8253451.1_g000001 Rmu_co8393241.1_g000001 Rmu_co8522225.1_g000005 Rmu_sc0000060.1_g000030 Rmu_sc0000060.1_g000031 Rmu_sc0000060.1_g000032 Rmu_sc0000090.1_g000008 Rmu_sc0000149.1_g000051 Rmu_sc0000149.1_g000058 Rmu_sc0000309.1_g000050 Rmu_sc0000370.1_g000022 Rmu_sc0000370.1_g000023 Rmu_sc0000370.1_g000024 Rmu_sc0000418.1_g000018 Rmu_sc0000427.1_g000014 Rmu_sc0000427.1_g000015 Rmu_sc0000434.1_g000008 Rmu_sc0000487.1_g000038 Rmu_sc0000487.1_g000039 Rmu_sc0000569.1_g000029 Rmu_sc0000580.1_g000097 Rmu_sc0000595.1_g000068 Rmu_sc0000607.1_g000027 Rmu_sc0000738.1_g000004 Rmu_sc0000758.1_g000001 Rmu_sc0000758.1_g000002 Rmu_sc0000870.1_g000019 Rmu_sc0000924.1_g000040 Rmu_sc0000924.1_g000041 Rmu_sc0000999.1_g000037 Rmu_sc0001001.1_g000001 Rmu_sc0001010.1_g000080 Rmu_sc0001075.1_g000041 Rmu_sc0001097.1_g000016 Rmu_sc0001173.1_g000020 Rmu_sc0001258.1_g000010 Rmu_sc0001425.1_g000031 Rmu_sc0001493.1_g000020 Rmu_sc0001493.1_g000021 Rmu_sc0001644.1_g000024 Rmu_sc0001648.1_g000039 Rmu_sc0001662.1_g000002 Rmu_sc0001849.1_g000046 Rmu_sc0001851.1_g000038 Rmu_sc0001861.1_g000006 Rmu_sc0001899.1_g000008 Rmu_sc0002231.1_g000023 Rmu_sc0002393.1_g000012 Rmu_sc0002515.1_g000010 Rmu_sc0002551.1_g000013 Rmu_sc0002680.1_g000029 Rmu_sc0002700.1_g000030 Rmu_sc0002700.1_g000031 Rmu_sc0002709.1_g000035 Rmu_sc0002779.1_g000017 Rmu_sc0003267.1_g000040 Rmu_sc0003306.1_g000009 Rmu_sc0003338.1_g000014 Rmu_sc0003522.1_g000038 Rmu_sc0003522.1_g000039 Rmu_sc0003653.1_g000031 Rmu_sc0003901.1_g000003 Rmu_sc0003920.1_g000009 Rmu_sc0004014.1_g000009 Rmu_sc0004016.1_g000013 Rmu_sc0004031.1_g000002 Rmu_sc0004106.1_g000001 Rmu_sc0004432.1_g000004 Rmu_sc0004481.1_g000020 Rmu_sc0004874.1_g000005 Rmu_sc0004928.1_g000005 Rmu_sc0005065.1_g000053 Rmu_sc0005091.1_g000005 Rmu_sc0005217.1_g000015 Rmu_sc0005242.1_g000002 Rmu_sc0005300.1_g000011 Rmu_sc0005400.1_g000004 Rmu_sc0005486.1_g000007 Rmu_sc0005527.1_g000015 Rmu_sc0006059.1_g000021 Rmu_sc0006087.1_g000004 Rmu_sc0006184.1_g000006 Rmu_sc0006184.1_g000007 Rmu_sc0006578.1_g000006 Rmu_sc0006730.1_g000010 Rmu_sc0006736.1_g000030 Rmu_sc0006736.1_g000033 Rmu_sc0007333.1_g000018 Rmu_sc0007856.1_g000010 Rmu_sc0008231.1_g000003 Rmu_sc0009862.1_g000012 Rmu_sc0010547.1_g000001 Rmu_sc0010547.1_g000003 Rmu_sc0010632.1_g000012 Rmu_sc0010747.1_g000008 Rmu_sc0011075.1_g000009 Rmu_sc0011565.1_g000004 Rmu_sc0011641.1_g000003 Rmu_sc0013102.1_g000013 Rmu_sc0013160.1_g000006 Rmu_sc0014846.1_g000004 Rmu_sc0017037.1_g000003 Rmu_sc0018203.1_g000001 Rmu_sc0018204.1_g000001 Rmu_sc0018348.1_g000001 Rmu_sc0019354.1_g000002 Rmu_sc0021630.1_g000002 Rmu_sc0022987.1_g000002 Rmu_sc0024469.1_g000005 Rmu_sc0033519.1_g000001 Rmu_sc0033519.1_g000002 Rmu_sc0033519.1_g000003 Rmu_sc0042775.1_g000001 Rmu_ssc0000110.1_g000003 Rmu_ssc0000110.1_g000004 Rmu_ssc0000126.1_g000068 Rmu_ssc0000200.1_g000007 Rmu_ssc0000295.1_g000003 Rmu_ssc0000295.1_g000004 Rmu_ssc0000299.1_g000010 Rmu_ssc0000308.1_g000024 Rmu_ssc0000339.1_g000006 Rmu_ssc0000385.1_g000012 Rmu_ssc0000409.1_g000004 Rmu_ssc0000421.1_g000004
rosa_roxburghii Rroxscaffold_156G00440360 Rroxscaffold_166G00440800 Rroxscaffold_1G00039040 Rroxscaffold_1G00039050 Rroxscaffold_1G00073950 Rroxscaffold_2G00091710 Rroxscaffold_2G00120050 Rroxscaffold_2G00122590 Rroxscaffold_3G00219700 Rroxscaffold_3G00264140 Rroxscaffold_4G00290600 Rroxscaffold_4G00323610 Rroxscaffold_4G00328460 Rroxscaffold_5G00343440 Rroxscaffold_5G00343570 Rroxscaffold_5G00378540 Rroxscaffold_5G00385090 Rroxscaffold_7G00169130 Rroxscaffold_7G00216420
rosa_rugosa Rorug01G0065800 Rorug01G0073500 Rorug01G0091700 Rorug01G0096500 Rorug01G0204700.1 Rorug01G0249100 Rorug01G0333800 Rorug01G0333900 Rorug01G0339500 Rorug01G0431300 Rorug02G0085400 Rorug02G0117500 Rorug02G0130900 Rorug02G0178800 Rorug02G0226700 Rorug02G0336300 Rorug02G0338700 Rorug02G0351400 Rorug02G0459900 Rorug03G0187000 Rorug03G0223700 Rorug03G0291300 Rorug03G0291300 Rorug03G0311100 Rorug03G0316900 Rorug03G0346000 Rorug04G0014500 Rorug04G0014600 Rorug04G0124100 Rorug04G0136500 Rorug04G0302000 Rorug04G0338100 Rorug04G0338200 Rorug04G0413100 Rorug05G0182200 Rorug05G0226500 Rorug05G0273300 Rorug05G0292200 Rorug05G0292200 Rorug05G0392500 Rorug05G0394500 Rorug05G0394600 Rorug05G0505600.1 Rorug06G0351400 Rorug06G0393400 Rorug06G0393600 Rorug06G0470000 Rorug07G0063100 Rorug07G0086800 Rorug07G0109200 Rorug07G0236100
rosa_samantha Rh1AG010800 Rh1AG011100 Rh1AG064900 Rh1AG088000 Rh1AG207100 Rh1AG262000 Rh1AG300800 Rh1BG043000 Rh1BG144600 Rh1BG180700 Rh1BG180800 Rh1BG328800 Rh1BG399400 Rh1CG041400 Rh1CG047300 Rh1CG379700 Rh1DG036500 Rh1DG083000 Rh1DG210700 Rh1DG210800 Rh1DG231100 Rh2AG007900 Rh2AG055500 Rh2AG339100 Rh2AG368100 Rh2BG243300 Rh2BG258900 Rh2BG292000 Rh2BG333500 Rh2BG387300 Rh2BG612800 Rh2BG619100 Rh2CG026500 Rh2CG163600 Rh2CG535700 Rh2DG186400 Rh2DG235000 Rh2DG314500 Rh2DG388500 Rh2DG391400 Rh2DG496900 Rh2DG526700 Rh2DG570700 Rh3AG330700 Rh3BG266900 Rh3CG236000 Rh3CG340400 Rh3DG090000 Rh3DG278400 Rh3DG297600 Rh3DG362600 Rh4AG001300 Rh4AG023300 Rh4AG097100 Rh4AG427000 Rh4BG029400 Rh4BG032400 Rh4BG086000 Rh4BG249200 Rh4CG001900 Rh4CG040600 Rh4CG093000 Rh4CG106300 Rh4CG113200 Rh4CG113900 Rh4DG002300 Rh4DG144400 Rh4DG234200 Rh5AG043700 Rh5AG084900 Rh5AG161500 Rh5AG409000 Rh5AG457200 Rh5AG457900 Rh5AG473700 Rh5AG520600 Rh5BG042100 Rh5BG124100 Rh5BG323500 Rh5BG417200 Rh5BG443700 Rh5BG451500 Rh5BG464900 Rh5BG470400 Rh5BG522500 Rh5CG068800 Rh5CG178300 Rh5CG231000 Rh5CG258600 Rh5CG394500 Rh5CG473700 Rh5DG164700 Rh5DG235400 Rh5DG261300 Rh5DG304900 Rh5DG334500 Rh5DG424300 Rh5DG458400 Rh5DG478600 Rh5DG552300 Rh5DG552700 Rh6AG037000 Rh6AG042100 Rh6AG255500 Rh6AG283400 Rh6AG291800 Rh6BG049600 Rh6BG080700 Rh6BG114600 Rh6BG128900 Rh6BG352500 Rh6CG052400 Rh6CG112900 Rh6CG113000 Rh6CG131300 Rh6CG157700 Rh6CG243200 Rh6CG254100 Rh6CG275700 Rh6CG299700 Rh6CG309100 Rh6CG317600 Rh6CG342600 Rh6CG471900 Rh6DG038200 Rh6DG102300 Rh6DG114400 Rh6DG225900 Rh6DG292900 Rh6DG320700 Rh6DG512800 Rh7AG217700 Rh7AG313900 Rh7AG446000 Rh7AG472600 Rh7BG223100 Rh7BG349900 Rh7BG352000 Rh7CG160200 Rh7CG233900 Rh7CG242700 Rh7CG273900 Rh7CG306400 Rh7CG322200 Rh7DG053800 Rh7DG077800 Rh7DG227700 Rh7DG404800
rosa_wichuraiana Rw0G003990 Rw2G022110 Rw2G024890 Rw6G005700 Rw7G008770

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 338
AccBSI CCGCTC 1 cut(s) 1028
AciI CCGC 5 cut(s) 98, 111, 842, 1028, 1184
AclWI GGATC 3 cut(s) 58, 173, 186
AcsI RAATTY 1 cut(s) 124
AcvI CACGTG 1 cut(s) 329
AcyI GRCGYC 1 cut(s) 95
AdeI CACNNNGTG 1 cut(s) 667
AfaI GTAC 1 cut(s) 648
AfiI CCNNNNNNNGG 5 cut(s) 426, 695, 794, 841, 940
AflIII ACRYGT 1 cut(s) 326
AgsI TTSAA 5 cut(s) 495, 555, 1045, 1121, 1162
AjnI CCWGG 2 cut(s) 760, 834
Alw26I GTCTC 2 cut(s) 48, 464
AlwI GGATC 3 cut(s) 58, 173, 186
Ama87I CYCGRG 1 cut(s) 940
AoxI GGCC 2 cut(s) 299, 1142
ApeKI GCWGC 5 cut(s) 423, 545, 617, 704, 784
ApoI RAATTY 1 cut(s) 124
ArsI GACNNNNNNTTYG 2 cut(s) 506, 538
AspS9I GGNCC 2 cut(s) 232, 522
AsuC2I CCSGG 2 cut(s) 941, 942
AsuHPI GGTGA 2 cut(s) 99, 442
AsuNHI GCTAGC 1 cut(s) 449
AvaI CYCGRG 1 cut(s) 940
AvaII GGWCC 2 cut(s) 232, 522
AxyI CCTNAGG 1 cut(s) 1082
BaeGI GKGCMC 1 cut(s) 343
BamHI GGATCC 1 cut(s) 178
BanI GGYRCC 1 cut(s) 338
BanII GRGCYC 2 cut(s) 460, 729
BbrPI CACGTG 1 cut(s) 329
BbvI GCAGC 5 cut(s) 410, 532, 604, 691, 771
BciT130I CCWGG 2 cut(s) 762, 836
BciVI GTATCC 2 cut(s) 83, 138
BcnI CCSGG 2 cut(s) 941, 942
BcoDI GTCTC 2 cut(s) 48, 464
BfaI CTAG 6 cut(s) 237, 297, 450, 519, 810, 1192
BfmI CTRYAG 2 cut(s) 424, 779
BfuI GTATCC 2 cut(s) 83, 138
BglII AGATCT 1 cut(s) 563
BisI GCNGC 6 cut(s) 98, 424, 546, 618, 705, 785
BlsI GCNGC 6 cut(s) 99, 425, 547, 619, 706, 786
Bme1390I CCNGG 4 cut(s) 762, 836, 941, 942
Bme18I GGWCC 2 cut(s) 232, 522
BmeT110I CYCGRG 1 cut(s) 940
BmgT120I GGNCC 2 cut(s) 232, 522
BmiI GGNNCC 6 cut(s) 180, 234, 340, 459, 579, 932
BmrFI CCNGG 4 cut(s) 762, 836, 941, 942
BmrI ACTGGG 2 cut(s) 485, 705
BmsI GCATC 2 cut(s) 157, 478
BmtI GCTAGC 1 cut(s) 453
BmuI ACTGGG 2 cut(s) 485, 705
BpmI CTGGAG 1 cut(s) 917
BpuMI CCSGG 2 cut(s) 941, 942
Bsa29I ATCGAT 1 cut(s) 250
BsaAI YACGTR 1 cut(s) 329
BsaHI GRCGYC 1 cut(s) 95
BsaI GGTCTC 1 cut(s) 48
BsaJI CCNNGG 1 cut(s) 940
Bsc4I CCNNNNNNNGG 5 cut(s) 426, 695, 794, 841, 940
Bse1I ACTGG 3 cut(s) 73, 480, 700
Bse21I CCTNAGG 1 cut(s) 1082
Bse3DI GCAATG 2 cut(s) 487, 1055
BseBI CCWGG 2 cut(s) 762, 836
BseCI ATCGAT 1 cut(s) 250
BseDI CCNNGG 1 cut(s) 940
BseGI GGATG 2 cut(s) 289, 1005
BseLI CCNNNNNNNGG 5 cut(s) 426, 695, 794, 841, 940
BseMI GCAATG 2 cut(s) 487, 1055
BseMII CTCAG 3 cut(s) 459, 587, 714
BseNI ACTGG 3 cut(s) 73, 480, 700
BseSI GKGCMC 1 cut(s) 343
BseXI GCAGC 5 cut(s) 410, 532, 604, 691, 771
BseYI CCCAGC 2 cut(s) 312, 453
BshFI GGCC 2 cut(s) 301, 1144
BshNI GGYRCC 1 cut(s) 338
BshVI ATCGAT 1 cut(s) 250
BsiHKCI CYCGRG 1 cut(s) 940
BsiSI CCGG 2 cut(s) 420, 941
BslFI GGGAC 2 cut(s) 170, 1085
BslI CCNNNNNNNGG 5 cut(s) 426, 695, 794, 841, 940
BsmAI GTCTC 2 cut(s) 48, 464
BsmFI GGGAC 2 cut(s) 170, 1085
BsmI GAATGC 1 cut(s) 1116
BsnI GGCC 2 cut(s) 301, 1144
Bso31I GGTCTC 1 cut(s) 48
BsoBI CYCGRG 1 cut(s) 940
Bsp1286I GDGCHC 3 cut(s) 343, 460, 729
Bsp143I GATC 5 cut(s) 50, 178, 247, 563, 712
BspACI CCGC 5 cut(s) 98, 111, 842, 1028, 1184
BspANI GGCC 2 cut(s) 301, 1144
BspCNI CTCAG 3 cut(s) 460, 586, 715
BspDI ATCGAT 1 cut(s) 250
BspLI GGNNCC 6 cut(s) 180, 234, 340, 459, 579, 932
BspMAI CTGCAG 1 cut(s) 428
BspOI GCTAGC 1 cut(s) 453
BspPI GGATC 3 cut(s) 58, 173, 186
BspT107I GGYRCC 1 cut(s) 338
BspTNI GGTCTC 1 cut(s) 48
BsrBI CCGCTC 1 cut(s) 1028
BsrDI GCAATG 2 cut(s) 487, 1055
BsrI ACTGG 3 cut(s) 73, 480, 700
BssECI CCNNGG 1 cut(s) 940
BssMI GATC 5 cut(s) 50, 178, 247, 563, 712
BssNI GRCGYC 1 cut(s) 95
Bst2UI CCWGG 2 cut(s) 762, 836
Bst4CI ACNGT 4 cut(s) 244, 335, 443, 1157
BstACI GRCGYC 1 cut(s) 95
BstBAI YACGTR 1 cut(s) 329
BstC8I GCNNGC 3 cut(s) 218, 451, 802
BstDEI CTNAG 6 cut(s) 468, 573, 723, 1022, 1082, 1139
BstENI CCTNNNNNAGG 1 cut(s) 792
BstF5I GGATG 2 cut(s) 289, 1005
BstKTI GATC 5 cut(s) 53, 181, 250, 566, 715
BstMAI GTCTC 2 cut(s) 48, 464
BstMBI GATC 5 cut(s) 50, 178, 247, 563, 712
BstMWI GCNNNNNNNGC 6 cut(s) 226, 455, 590, 724, 781, 810
BstNI CCWGG 2 cut(s) 762, 836
BstNSI RCATGY 1 cut(s) 220
BstSCI CCNGG 4 cut(s) 760, 834, 939, 940
BstSFI CTRYAG 2 cut(s) 424, 779
BstSLI GKGCMC 1 cut(s) 343
BstV1I GCAGC 5 cut(s) 410, 532, 604, 691, 771
BstX2I RGATCY 3 cut(s) 50, 178, 563
BstYI RGATCY 3 cut(s) 50, 178, 563
Bsu15I ATCGAT 1 cut(s) 250
Bsu36I CCTNAGG 1 cut(s) 1082
BsuI GTATCC 2 cut(s) 83, 138
BsuRI GGCC 2 cut(s) 301, 1144
BsuTUI ATCGAT 1 cut(s) 250
BtsCI GGATG 2 cut(s) 289, 1005
BtsIMutI CAGTG 2 cut(s) 448, 473
Cac8I GCNNGC 3 cut(s) 218, 451, 802
Cfr13I GGNCC 2 cut(s) 232, 522
Cfr9I CCCGGG 1 cut(s) 940
ClaI ATCGAT 1 cut(s) 250
CseI GACGC 3 cut(s) 103, 645, 1103
Csp6I GTAC 1 cut(s) 647
CspCI CAANNNNNGTGG 2 cut(s) 365, 400
CviAII CATG 3 cut(s) 217, 989, 1181
CviQI GTAC 1 cut(s) 647
DdeI CTNAG 6 cut(s) 468, 573, 723, 1022, 1082, 1139
DpnI GATC 5 cut(s) 52, 180, 249, 565, 714
DpnII GATC 5 cut(s) 50, 178, 247, 563, 712
DraIII CACNNNGTG 1 cut(s) 667
Eco147I AGGCCT 1 cut(s) 1144
Eco24I GRGCYC 2 cut(s) 460, 729
Eco31I GGTCTC 1 cut(s) 48
Eco47I GGWCC 2 cut(s) 232, 522
Eco72I CACGTG 1 cut(s) 329
Eco81I CCTNAGG 1 cut(s) 1082
Eco88I CYCGRG 1 cut(s) 940
EcoNI CCTNNNNNAGG 1 cut(s) 792
EcoRI GAATTC 1 cut(s) 124
EcoRII CCWGG 2 cut(s) 760, 834
EcoT38I GRGCYC 2 cut(s) 460, 729
FaeI CATG 3 cut(s) 220, 992, 1184
FaqI GGGAC 2 cut(s) 170, 1085
FatI CATG 3 cut(s) 216, 988, 1180
FauI CCCGC 1 cut(s) 118
Fnu4HI GCNGC 6 cut(s) 98, 424, 546, 618, 705, 785
FokI GGATG 2 cut(s) 296, 992
FriOI GRGCYC 2 cut(s) 460, 729
Fsp4HI GCNGC 6 cut(s) 98, 424, 546, 618, 705, 785
FspBI CTAG 6 cut(s) 237, 297, 450, 519, 810, 1192
GluI GCNGC 6 cut(s) 98, 424, 546, 618, 705, 785
GsaI CCCAGC 2 cut(s) 316, 457
GsuI CTGGAG 1 cut(s) 917
HaeIII GGCC 2 cut(s) 301, 1144
HapII CCGG 2 cut(s) 420, 941
HgaI GACGC 3 cut(s) 103, 645, 1103
Hin1I GRCGYC 1 cut(s) 95
Hin1II CATG 3 cut(s) 220, 992, 1184
HincII GTYRAC 3 cut(s) 289, 309, 610
HindII GTYRAC 3 cut(s) 289, 309, 610
HindIII AAGCTT 2 cut(s) 846, 1019
HinfI GANTC 1 cut(s) 252
HpaI GTTAAC 1 cut(s) 289
HpaII CCGG 2 cut(s) 420, 941
HphI GGTGA 2 cut(s) 99, 442
Hpy166II GTNNAC 3 cut(s) 289, 309, 610
Hpy188I TCNGA 3 cut(s) 868, 914, 921
Hpy188III TCNNGA 3 cut(s) 142, 575, 769
Hpy8I GTNNAC 3 cut(s) 289, 309, 610
HpyAV CCTTC 2 cut(s) 86, 1155
HpyCH4III ACNGT 4 cut(s) 244, 335, 443, 1157
HpyCH4IV ACGT 1 cut(s) 328
HpyCH4V TGCA 8 cut(s) 31, 136, 269, 426, 620, 732, 804, 1116
HpyF10VI GCNNNNNNNGC 6 cut(s) 226, 455, 590, 724, 781, 810
HpyF3I CTNAG 6 cut(s) 468, 573, 723, 1022, 1082, 1139
HpySE526I ACGT 1 cut(s) 328
Hsp92I GRCGYC 1 cut(s) 95
Hsp92II CATG 3 cut(s) 220, 992, 1184
KspAI GTTAAC 1 cut(s) 289
Kzo9I GATC 5 cut(s) 50, 178, 247, 563, 712
LmnI GCTCC 3 cut(s) 463, 670, 936
Lsp1109I GCAGC 5 cut(s) 410, 532, 604, 691, 771
LweI GCATC 2 cut(s) 157, 478
MaeI CTAG 6 cut(s) 237, 297, 450, 519, 810, 1192
MaeII ACGT 1 cut(s) 328
MaeIII GTNAC 5 cut(s) 60, 322, 329, 634, 657
MalI GATC 5 cut(s) 52, 180, 249, 565, 714
MbiI CCGCTC 1 cut(s) 1028
MboI GATC 5 cut(s) 50, 178, 247, 563, 712
MboII GAAGA 5 cut(s) 729, 732, 735, 1125, 1181
MfeI CAATTG 2 cut(s) 345, 977
MflI RGATCY 3 cut(s) 50, 178, 563
MhlI GDGCHC 3 cut(s) 343, 460, 729
MnlI CCTC 7 cut(s) 439, 497, 583, 692, 768, 786, 966
MseI TTAA 5 cut(s) 161, 288, 438, 749, 948
MspA1I CMGCKG 1 cut(s) 784
MspI CCGG 2 cut(s) 420, 941
MspR9I CCNGG 4 cut(s) 762, 836, 941, 942
MunI CAATTG 2 cut(s) 345, 977
Mva1269I GAATGC 1 cut(s) 1116
MvaI CCWGG 2 cut(s) 762, 836
MwoI GCNNNNNNNGC 6 cut(s) 226, 455, 590, 724, 781, 810
NciI CCSGG 2 cut(s) 941, 942
NdeII GATC 5 cut(s) 50, 178, 247, 563, 712
NheI GCTAGC 1 cut(s) 449
NlaIII CATG 3 cut(s) 220, 992, 1184
NlaIV GGNNCC 6 cut(s) 180, 234, 340, 459, 579, 932
NmeAIII GCCGAG 1 cut(s) 514
NmuCI GTSAC 2 cut(s) 329, 657
NspI RCATGY 1 cut(s) 220
PaeI GCATGC 1 cut(s) 220
PceI AGGCCT 1 cut(s) 1144
PcsI WCGNNNNNNNCGW 1 cut(s) 325
PctI GAATGC 1 cut(s) 1116
PfeI GAWTC 1 cut(s) 252
PkrI GCNGC 6 cut(s) 99, 425, 547, 619, 706, 786
PmaCI CACGTG 1 cut(s) 329
PmlI CACGTG 1 cut(s) 329
Ppu21I YACGTR 1 cut(s) 329
Psp6I CCWGG 2 cut(s) 760, 834
PspCI CACGTG 1 cut(s) 329
PspFI CCCAGC 2 cut(s) 312, 453
PspGI CCWGG 2 cut(s) 760, 834
PspN4I GGNNCC 6 cut(s) 180, 234, 340, 459, 579, 932
PspPI GGNCC 2 cut(s) 232, 522
PstI CTGCAG 1 cut(s) 428
PsuI RGATCY 3 cut(s) 50, 178, 563
PvuII CAGCTG 1 cut(s) 784
RsaI GTAC 1 cut(s) 648
RsaNI GTAC 1 cut(s) 647
SaqAI TTAA 5 cut(s) 161, 288, 438, 749, 948
SatI GCNGC 6 cut(s) 98, 424, 546, 618, 705, 785
Sau3AI GATC 5 cut(s) 50, 178, 247, 563, 712
Sau96I GGNCC 2 cut(s) 232, 522
ScrFI CCNGG 4 cut(s) 762, 836, 941, 942
SduI GDGCHC 3 cut(s) 343, 460, 729
SfaNI GCATC 2 cut(s) 157, 478
SfcI CTRYAG 2 cut(s) 424, 779
SinI GGWCC 2 cut(s) 232, 522
SmaI CCCGGG 1 cut(s) 942
SphI GCATGC 1 cut(s) 220
SseBI AGGCCT 1 cut(s) 1144
SsiI CCGC 5 cut(s) 98, 111, 842, 1028, 1184
SspI AATATT 1 cut(s) 403
SspMI CTAG 6 cut(s) 237, 297, 450, 519, 810, 1192
StuI AGGCCT 1 cut(s) 1144
StyD4I CCNGG 4 cut(s) 760, 834, 939, 940
TaaI ACNGT 4 cut(s) 244, 335, 443, 1157
TaiI ACGT 1 cut(s) 331
TaqI TCGA 2 cut(s) 250, 512
TauI GCSGC 1 cut(s) 100
TfiI GAWTC 1 cut(s) 252
Tru1I TTAA 5 cut(s) 161, 288, 438, 749, 948
Tru9I TTAA 5 cut(s) 161, 288, 438, 749, 948
TscAI CASTG 2 cut(s) 448, 480
TseFI GTSAC 2 cut(s) 329, 657
TseI GCWGC 5 cut(s) 423, 545, 617, 704, 784
Tsp45I GTSAC 2 cut(s) 329, 657
TspDTI ATGAA 8 cut(s) 71, 73, 381, 735, 881, 977, 994, 1188
TspMI CCCGGG 1 cut(s) 940
TspRI CASTG 2 cut(s) 448, 480
VpaK11BI GGWCC 2 cut(s) 232, 522
XagI CCTNNNNNAGG 1 cut(s) 792
XapI RAATTY 1 cut(s) 124
XceI RCATGY 1 cut(s) 220
XmaI CCCGGG 1 cut(s) 940
XspI CTAG 6 cut(s) 237, 297, 450, 519, 810, 1192
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.