Rmu_sc0001644.1_g000024

Domain of unknown function (DUF4283)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001644.1
OG0000044
Physical Location & Seq
Reverse (-)
119720 .. 122198
2479 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001644.1_g000024.1.cds

Sequence Viewer

Length: 1512 bp
atgtcggcgatgagcgccggaacctcaagagcggctgcatgtccatgggccttcttgtgtccattggaggagggtttgcctcatcctcaacctattccaaaggccaaaacattcgcctctatgctctctaactcagtggagtctttcgtctctcttagcgaattgcctactccagtcttatgcggagacaaaacttacgtcaaaatcaatgaagctctataccaggatcagttgaaaaatttcaaaaccaatcttattggtaggctgctactgcgaaagggttctgtcccaatgaaaacacccatccttaagagcttgcttgccgatctatgggagccatcagcgccttggcgcttggaggacctacgacgagtttggggtggtcgtacatgcactctacccgacggcctcttccgactggctcaatggaagcctgactttgtgcctggggatttccttccacaaacacattcccaagtatgggtcagattgtatagcttgagccaagattactggcatcctcaacatcttatggaaattgcgcggggagtgggtacgcccttgcagttggataaggctaccaaggagcgtgaatttgggtattacgctcgggcgctagtgaacgttgatcttgccagcgagttgccttcttcgctcatgggtgattcaaagcctcataatattgagaaacctactagagttcagcagccggtggtccgccaggtatacaaagtgaatgagaagtctgcttcaaaaaaaagtcagactacagaagttcagcccttagttgagacacctgatactaatgttgtgattccagcatgcgcagaaatgcatgttcacactggccaagattccttacaagttgccacgagaaatatagaacctattgataatgggagagctagtagtccagggagtacagttaggtctggacctcctactaccaatgacaatcagtttgccattttggctcatgatgtcattgtaggggctgccaatgacttaattgagcaattagcagaccaagtgttccttgaaccaaatgatcaatccattgccgcagagcattcaagggagatcgctattcaggcttcagttgatgagggggactcattccctacctcccccattgtgacaaagggaaatgcagttgttgttcaagggccagaggacgtgtccttctcaaggctcatgcttagtcagagatcaccattccaatttcagcgcatgtggttggatcatccaagttttctttctttggtgacagatgtctggcagagtgttcacttctatggcaatccaatgtttgtcctggcttctaagcttcggactcttaagcagaggattctggcttggaataaaactgagtttggggatgtcaacataatggtggaaaattcctttgtcagcaggaagttgctagtttggatccttcagaggacaggctttctaaggagagtgctgctagctagtgctcaagttcatgtggcccttgctcttcaagaataa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4283 zf-CCHC_4

Protein Analysis

503

Amino Acids

56.11

Weight (kDa)

6.88

Isoelectric Point (pI)

49.81

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000044)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G07760 AT5G28823
fragaria_vesca FvH4_1g13572 FvH4_2g03281 FvH4_2g04691 FvH4_2g08332 FvH4_2g08333 FvH4_2g15313 FvH4_2g26101 FvH4_2g29541 FvH4_3g06911 FvH4_3g34351 FvH4_3g43733 FvH4_4g02432 FvH4_4g05601 FvH4_4g08213 FvH4_4g09961 FvH4_4g10131 FvH4_4g20001 FvH4_4g20002 FvH4_5g01051 FvH4_5g01401 FvH4_5g27943 FvH4_6g09220 FvH4_6g17383 FvH4_6g35491 FvH4_6g46421 FvH4_7g04151 FvH4_7g13962 FvH4_7g18611 FvH4_7g19491 FvH4_7g19511 FvH4_7g26562
malus_domestica MD06G1221600.v1.1
pyrus_communis pycom10g21150
rosa_chinensis RchiOBHm_Chr1g0337571 RchiOBHm_Chr2g0168771 RchiOBHm_Chr3g0453631 RchiOBHm_Chr6g0278581
rosa_laevigata RLG00000001899 RLG00000001925 RLG00000002026 RLG00000003410 RLG00000003767 RLG00000004304 RLG00000004473 RLG00000004677 RLG00000006856 RLG00000007994 RLG00000009888 RLG00000011627 RLG00000012174 RLG00000012217 RLG00000013118 RLG00000013736 RLG00000014194 RLG00000014251 RLG00000015011 RLG00000015057 RLG00000015235 RLG00000017416 RLG00000018052 RLG00000018537 RLG00000019968 RLG00000020096 RLG00000020263 RLG00000022606 RLG00000023119 RLG00000028111 RLG00000029686 RLG00000030126 RLG00000031124 RLG00000031236 RLG00000032766 RLG00000033171 RLG00000033548 RLG00000033987 RLG00000034062 RLG00000035115 RLG00000035863
rosa_multiflora Rmu_co8036712.1_g000001 Rmu_co8080248.1_g000001 Rmu_co8208334.1_g000001 Rmu_co8253451.1_g000001 Rmu_co8393241.1_g000001 Rmu_co8522225.1_g000005 Rmu_sc0000060.1_g000030 Rmu_sc0000060.1_g000031 Rmu_sc0000060.1_g000032 Rmu_sc0000090.1_g000008 Rmu_sc0000149.1_g000051 Rmu_sc0000149.1_g000058 Rmu_sc0000309.1_g000050 Rmu_sc0000370.1_g000022 Rmu_sc0000370.1_g000023 Rmu_sc0000370.1_g000024 Rmu_sc0000418.1_g000018 Rmu_sc0000427.1_g000014 Rmu_sc0000427.1_g000015 Rmu_sc0000434.1_g000008 Rmu_sc0000487.1_g000038 Rmu_sc0000487.1_g000039 Rmu_sc0000569.1_g000029 Rmu_sc0000580.1_g000097 Rmu_sc0000595.1_g000068 Rmu_sc0000607.1_g000027 Rmu_sc0000738.1_g000004 Rmu_sc0000758.1_g000001 Rmu_sc0000758.1_g000002 Rmu_sc0000870.1_g000019 Rmu_sc0000924.1_g000040 Rmu_sc0000924.1_g000041 Rmu_sc0000999.1_g000037 Rmu_sc0001001.1_g000001 Rmu_sc0001010.1_g000080 Rmu_sc0001075.1_g000041 Rmu_sc0001097.1_g000016 Rmu_sc0001173.1_g000020 Rmu_sc0001258.1_g000010 Rmu_sc0001425.1_g000031 Rmu_sc0001493.1_g000020 Rmu_sc0001493.1_g000021 Rmu_sc0001644.1_g000024 Rmu_sc0001648.1_g000039 Rmu_sc0001662.1_g000002 Rmu_sc0001849.1_g000046 Rmu_sc0001851.1_g000038 Rmu_sc0001861.1_g000006 Rmu_sc0001899.1_g000008 Rmu_sc0002231.1_g000023 Rmu_sc0002393.1_g000012 Rmu_sc0002515.1_g000010 Rmu_sc0002551.1_g000013 Rmu_sc0002680.1_g000029 Rmu_sc0002700.1_g000030 Rmu_sc0002700.1_g000031 Rmu_sc0002709.1_g000035 Rmu_sc0002779.1_g000017 Rmu_sc0003267.1_g000040 Rmu_sc0003306.1_g000009 Rmu_sc0003338.1_g000014 Rmu_sc0003522.1_g000038 Rmu_sc0003522.1_g000039 Rmu_sc0003653.1_g000031 Rmu_sc0003901.1_g000003 Rmu_sc0003920.1_g000009 Rmu_sc0004014.1_g000009 Rmu_sc0004016.1_g000013 Rmu_sc0004031.1_g000002 Rmu_sc0004106.1_g000001 Rmu_sc0004432.1_g000004 Rmu_sc0004481.1_g000020 Rmu_sc0004874.1_g000005 Rmu_sc0004928.1_g000005 Rmu_sc0005065.1_g000053 Rmu_sc0005091.1_g000005 Rmu_sc0005217.1_g000015 Rmu_sc0005242.1_g000002 Rmu_sc0005300.1_g000011 Rmu_sc0005400.1_g000004 Rmu_sc0005486.1_g000007 Rmu_sc0005527.1_g000015 Rmu_sc0006059.1_g000021 Rmu_sc0006087.1_g000004 Rmu_sc0006184.1_g000006 Rmu_sc0006184.1_g000007 Rmu_sc0006578.1_g000006 Rmu_sc0006730.1_g000010 Rmu_sc0006736.1_g000030 Rmu_sc0006736.1_g000033 Rmu_sc0007333.1_g000018 Rmu_sc0007856.1_g000010 Rmu_sc0008231.1_g000003 Rmu_sc0009862.1_g000012 Rmu_sc0010547.1_g000001 Rmu_sc0010547.1_g000003 Rmu_sc0010632.1_g000012 Rmu_sc0010747.1_g000008 Rmu_sc0011075.1_g000009 Rmu_sc0011565.1_g000004 Rmu_sc0011641.1_g000003 Rmu_sc0013102.1_g000013 Rmu_sc0013160.1_g000006 Rmu_sc0014846.1_g000004 Rmu_sc0017037.1_g000003 Rmu_sc0018203.1_g000001 Rmu_sc0018204.1_g000001 Rmu_sc0018348.1_g000001 Rmu_sc0019354.1_g000002 Rmu_sc0021630.1_g000002 Rmu_sc0022987.1_g000002 Rmu_sc0024469.1_g000005 Rmu_sc0033519.1_g000001 Rmu_sc0033519.1_g000002 Rmu_sc0033519.1_g000003 Rmu_sc0042775.1_g000001 Rmu_ssc0000110.1_g000003 Rmu_ssc0000110.1_g000004 Rmu_ssc0000126.1_g000068 Rmu_ssc0000200.1_g000007 Rmu_ssc0000295.1_g000003 Rmu_ssc0000295.1_g000004 Rmu_ssc0000299.1_g000010 Rmu_ssc0000308.1_g000024 Rmu_ssc0000339.1_g000006 Rmu_ssc0000385.1_g000012 Rmu_ssc0000409.1_g000004 Rmu_ssc0000421.1_g000004
rosa_roxburghii Rroxscaffold_156G00440360 Rroxscaffold_166G00440800 Rroxscaffold_1G00039040 Rroxscaffold_1G00039050 Rroxscaffold_1G00073950 Rroxscaffold_2G00091710 Rroxscaffold_2G00120050 Rroxscaffold_2G00122590 Rroxscaffold_3G00219700 Rroxscaffold_3G00264140 Rroxscaffold_4G00290600 Rroxscaffold_4G00323610 Rroxscaffold_4G00328460 Rroxscaffold_5G00343440 Rroxscaffold_5G00343570 Rroxscaffold_5G00378540 Rroxscaffold_5G00385090 Rroxscaffold_7G00169130 Rroxscaffold_7G00216420
rosa_rugosa Rorug01G0065800 Rorug01G0073500 Rorug01G0091700 Rorug01G0096500 Rorug01G0204700.1 Rorug01G0249100 Rorug01G0333800 Rorug01G0333900 Rorug01G0339500 Rorug01G0431300 Rorug02G0085400 Rorug02G0117500 Rorug02G0130900 Rorug02G0178800 Rorug02G0226700 Rorug02G0336300 Rorug02G0338700 Rorug02G0351400 Rorug02G0459900 Rorug03G0187000 Rorug03G0223700 Rorug03G0291300 Rorug03G0291300 Rorug03G0311100 Rorug03G0316900 Rorug03G0346000 Rorug04G0014500 Rorug04G0014600 Rorug04G0124100 Rorug04G0136500 Rorug04G0302000 Rorug04G0338100 Rorug04G0338200 Rorug04G0413100 Rorug05G0182200 Rorug05G0226500 Rorug05G0273300 Rorug05G0292200 Rorug05G0292200 Rorug05G0392500 Rorug05G0394500 Rorug05G0394600 Rorug05G0505600.1 Rorug06G0351400 Rorug06G0393400 Rorug06G0393600 Rorug06G0470000 Rorug07G0063100 Rorug07G0086800 Rorug07G0109200 Rorug07G0236100
rosa_samantha Rh1AG010800 Rh1AG011100 Rh1AG064900 Rh1AG088000 Rh1AG207100 Rh1AG262000 Rh1AG300800 Rh1BG043000 Rh1BG144600 Rh1BG180700 Rh1BG180800 Rh1BG328800 Rh1BG399400 Rh1CG041400 Rh1CG047300 Rh1CG379700 Rh1DG036500 Rh1DG083000 Rh1DG210700 Rh1DG210800 Rh1DG231100 Rh2AG007900 Rh2AG055500 Rh2AG339100 Rh2AG368100 Rh2BG243300 Rh2BG258900 Rh2BG292000 Rh2BG333500 Rh2BG387300 Rh2BG612800 Rh2BG619100 Rh2CG026500 Rh2CG163600 Rh2CG535700 Rh2DG186400 Rh2DG235000 Rh2DG314500 Rh2DG388500 Rh2DG391400 Rh2DG496900 Rh2DG526700 Rh2DG570700 Rh3AG330700 Rh3BG266900 Rh3CG236000 Rh3CG340400 Rh3DG090000 Rh3DG278400 Rh3DG297600 Rh3DG362600 Rh4AG001300 Rh4AG023300 Rh4AG097100 Rh4AG427000 Rh4BG029400 Rh4BG032400 Rh4BG086000 Rh4BG249200 Rh4CG001900 Rh4CG040600 Rh4CG093000 Rh4CG106300 Rh4CG113200 Rh4CG113900 Rh4DG002300 Rh4DG144400 Rh4DG234200 Rh5AG043700 Rh5AG084900 Rh5AG161500 Rh5AG409000 Rh5AG457200 Rh5AG457900 Rh5AG473700 Rh5AG520600 Rh5BG042100 Rh5BG124100 Rh5BG323500 Rh5BG417200 Rh5BG443700 Rh5BG451500 Rh5BG464900 Rh5BG470400 Rh5BG522500 Rh5CG068800 Rh5CG178300 Rh5CG231000 Rh5CG258600 Rh5CG394500 Rh5CG473700 Rh5DG164700 Rh5DG235400 Rh5DG261300 Rh5DG304900 Rh5DG334500 Rh5DG424300 Rh5DG458400 Rh5DG478600 Rh5DG552300 Rh5DG552700 Rh6AG037000 Rh6AG042100 Rh6AG255500 Rh6AG283400 Rh6AG291800 Rh6BG049600 Rh6BG080700 Rh6BG114600 Rh6BG128900 Rh6BG352500 Rh6CG052400 Rh6CG112900 Rh6CG113000 Rh6CG131300 Rh6CG157700 Rh6CG243200 Rh6CG254100 Rh6CG275700 Rh6CG299700 Rh6CG309100 Rh6CG317600 Rh6CG342600 Rh6CG471900 Rh6DG038200 Rh6DG102300 Rh6DG114400 Rh6DG225900 Rh6DG292900 Rh6DG320700 Rh6DG512800 Rh7AG217700 Rh7AG313900 Rh7AG446000 Rh7AG472600 Rh7BG223100 Rh7BG349900 Rh7BG352000 Rh7CG160200 Rh7CG233900 Rh7CG242700 Rh7CG273900 Rh7CG306400 Rh7CG322200 Rh7DG053800 Rh7DG077800 Rh7DG227700 Rh7DG404800
rosa_wichuraiana Rw0G003990 Rw2G022110 Rw2G024890 Rw6G005700 Rw7G008770

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 826
AccBSI CCGCTC 1 cut(s) 32
AccI GTMKAC 1 cut(s) 726
AccII CGCG 1 cut(s) 544
AciI CCGC 5 cut(s) 32, 183, 544, 718, 1062
AclI AACGTT 1 cut(s) 624
AclWI GGATC 4 cut(s) 234, 1248, 1426, 1439
AcoI YGGCCR 1 cut(s) 847
AcsI RAATTY 3 cut(s) 238, 593, 1399
AcuI CTGAAG 2 cut(s) 1080, 1421
AfaI GTAC 3 cut(s) 388, 556, 922
AfiI CCNNNNNNNGG 4 cut(s) 330, 480, 481, 1188
AflII CTTAAG 2 cut(s) 308, 1337
AflIII ACRYGT 1 cut(s) 1176
AgsI TTSAA 8 cut(s) 235, 244, 669, 753, 1040, 1074, 1163, 1505
AjiI CACGTC 1 cut(s) 1177
AjnI CCWGG 5 cut(s) 222, 445, 720, 913, 1314
AjuI GAANNNNNNNTTGG 2 cut(s) 1240, 1272
AluBI AGCT 6 cut(s) 215, 315, 498, 905, 1327, 1472
AluI AGCT 6 cut(s) 215, 315, 498, 905, 1327, 1472
Alw21I GWGCWC 1 cut(s) 1480
Alw26I GTCTC 3 cut(s) 154, 180, 785
AlwI GGATC 4 cut(s) 234, 1248, 1426, 1439
Ama87I CYCGRG 1 cut(s) 609
AoxI GGCC 6 cut(s) 48, 102, 406, 847, 1166, 1491
ApeKI GCWGC 5 cut(s) 35, 265, 706, 995, 1465
ApoI RAATTY 3 cut(s) 238, 593, 1399
ArsI GACNNNNNNTTYG 4 cut(s) 183, 215, 944, 976
Asp700I GAANNNNTTC 2 cut(s) 239, 280
AspLEI GCGC 7 cut(s) 17, 346, 354, 544, 616, 827, 1230
AspS9I GGNCC 6 cut(s) 48, 361, 715, 935, 1166, 1492
AsuHPI GGTGA 3 cut(s) 674, 1203, 1276
AsuNHI GCTAGC 1 cut(s) 1468
AvaI CYCGRG 1 cut(s) 609
AvaII GGWCC 3 cut(s) 361, 715, 935
BaeI ACNNNNGTAYC 2 cut(s) 792, 825
BalI TGGCCA 1 cut(s) 849
BamHI GGATCC 1 cut(s) 1431
BauI CACGAG 1 cut(s) 871
Bbv12I GWGCWC 1 cut(s) 1480
BbvI GCAGC 5 cut(s) 22, 252, 718, 982, 1452
BccI CCATC 2 cut(s) 311, 346
BceAI ACGGC 1 cut(s) 421
BciT130I CCWGG 5 cut(s) 224, 447, 722, 915, 1316
BclI TGATCA 1 cut(s) 1048
BcoDI GTCTC 3 cut(s) 154, 180, 785
BfaI CTAG 6 cut(s) 617, 696, 906, 1424, 1469, 1473
BfmI CTRYAG 1 cut(s) 768
BfoI RGCGCY 4 cut(s) 18, 347, 355, 617
BfrI CTTAAG 2 cut(s) 308, 1337
BglI GCCNNNNNGGC 1 cut(s) 971
BisI GCNGC 7 cut(s) 33, 36, 266, 707, 996, 1062, 1466
BlsI GCNGC 7 cut(s) 34, 37, 267, 708, 997, 1063, 1467
Bme1390I CCNGG 5 cut(s) 224, 447, 722, 915, 1316
Bme18I GGWCC 3 cut(s) 361, 715, 935
BmeT110I CYCGRG 1 cut(s) 609
BmgBI CACGTC 1 cut(s) 1177
BmgT120I GGNCC 6 cut(s) 48, 361, 715, 935, 1166, 1492
BmiI GGNNCC 3 cut(s) 22, 336, 1433
BmrFI CCNGG 5 cut(s) 224, 447, 722, 915, 1316
BmsI GCATC 1 cut(s) 526
BmtI GCTAGC 1 cut(s) 1472
BoxI GACNNNNGTC 1 cut(s) 1271
BplI GAGNNNNNCTC 2 cut(s) 1097, 1129
BpmI CTGGAG 1 cut(s) 156
BpuEI CTTGAG 4 cut(s) 10, 520, 1171, 1464
BsaJI CCNNGG 5 cut(s) 44, 347, 446, 582, 914
BsaXI ACNNNNNCTCC 2 cut(s) 892, 922
Bsc4I CCNNNNNNNGG 4 cut(s) 330, 480, 481, 1188
Bse118I RCCGGY 1 cut(s) 709
Bse1I ACTGG 4 cut(s) 173, 423, 518, 850
Bse3DI GCAATG 1 cut(s) 1056
BseBI CCWGG 5 cut(s) 224, 447, 722, 915, 1316
BseDI CCNNGG 5 cut(s) 44, 347, 446, 582, 914
BseGI GGATG 5 cut(s) 82, 303, 517, 1243, 1384
BseLI CCNNNNNNNGG 4 cut(s) 330, 480, 481, 1188
BseMI GCAATG 1 cut(s) 1056
BseMII CTCAG 2 cut(s) 147, 1359
BseNI ACTGG 4 cut(s) 173, 423, 518, 850
BseRI GAGGAG 1 cut(s) 83
BseXI GCAGC 5 cut(s) 22, 252, 718, 982, 1452
Bsh1236I CGCG 1 cut(s) 544
BshFI GGCC 6 cut(s) 50, 104, 408, 849, 1168, 1493
BsiHKAI GWGCWC 1 cut(s) 1480
BsiHKCI CYCGRG 1 cut(s) 609
BsiSI CCGG 2 cut(s) 18, 710
BslFI GGGAC 2 cut(s) 272, 1124
BslI CCNNNNNNNGG 4 cut(s) 330, 480, 481, 1188
BsmAI GTCTC 3 cut(s) 154, 180, 785
BsmBI CGTCTC 1 cut(s) 154
BsmFI GGGAC 2 cut(s) 272, 1124
BsmI GAATGC 1 cut(s) 1069
BsnI GGCC 6 cut(s) 50, 104, 408, 849, 1168, 1493
BsoBI CYCGRG 1 cut(s) 609
Bsp1286I GDGCHC 1 cut(s) 1480
Bsp143I GATC 8 cut(s) 226, 325, 628, 1048, 1080, 1208, 1240, 1431
Bsp19I CCATGG 1 cut(s) 44
BspACI CCGC 5 cut(s) 32, 183, 544, 718, 1062
BspANI GGCC 6 cut(s) 50, 104, 408, 849, 1168, 1493
BspCNI CTCAG 2 cut(s) 146, 1360
BspFNI CGCG 1 cut(s) 544
BspHI TCATGA 1 cut(s) 976
BspLI GGNNCC 3 cut(s) 22, 336, 1433
BspOI GCTAGC 1 cut(s) 1472
BspPI GGATC 4 cut(s) 234, 1248, 1426, 1439
BspQI GCTCTTC 1 cut(s) 1506
BspTI CTTAAG 2 cut(s) 308, 1337
BsrBI CCGCTC 1 cut(s) 32
BsrDI GCAATG 1 cut(s) 1056
BsrFI RCCGGY 1 cut(s) 709
BsrI ACTGG 4 cut(s) 173, 423, 518, 850
BssAI RCCGGY 1 cut(s) 709
BssECI CCNNGG 5 cut(s) 44, 347, 446, 582, 914
BssMI GATC 8 cut(s) 226, 325, 628, 1048, 1080, 1208, 1240, 1431
BssNAI GTATAC 1 cut(s) 727
BssSI CACGAG 1 cut(s) 871
BssT1I CCWWGG 3 cut(s) 44, 347, 582
Bst1107I GTATAC 1 cut(s) 727
Bst2BI CACGAG 1 cut(s) 871
Bst2UI CCWGG 5 cut(s) 224, 447, 722, 915, 1316
Bst4CI ACNGT 1 cut(s) 925
Bst6I CTCTTC 2 cut(s) 416, 1506
BstAFI CTTAAG 2 cut(s) 308, 1337
BstC8I GCNNGC 5 cut(s) 317, 321, 637, 823, 1470
BstDEI CTNAG 7 cut(s) 133, 155, 784, 1199, 1323, 1368, 1454
BstDSI CCRYGG 1 cut(s) 44
BstENI CCTNNNNNAGG 1 cut(s) 1186
BstF5I GGATG 5 cut(s) 82, 303, 517, 1243, 1384
BstFNI CGCG 1 cut(s) 544
BstH2I RGCGCY 4 cut(s) 18, 347, 355, 617
BstHHI GCGC 7 cut(s) 17, 346, 354, 544, 616, 827, 1230
BstKTI GATC 8 cut(s) 229, 328, 631, 1051, 1083, 1211, 1243, 1434
BstMAI GTCTC 3 cut(s) 154, 180, 785
BstMBI GATC 8 cut(s) 226, 325, 628, 1048, 1080, 1208, 1240, 1431
BstMWI GCNNNNNNNGC 6 cut(s) 14, 271, 343, 652, 971, 1091
BstNI CCWGG 5 cut(s) 224, 447, 722, 915, 1316
BstNSI RCATGY 5 cut(s) 42, 393, 825, 839, 1234
BstPAI GACNNNNGTC 1 cut(s) 1271
BstSCI CCNGG 5 cut(s) 222, 445, 720, 913, 1314
BstSFI CTRYAG 1 cut(s) 768
BstUI CGCG 1 cut(s) 544
BstV1I GCAGC 5 cut(s) 22, 252, 718, 982, 1452
BstX2I RGATCY 1 cut(s) 1431
BstYI RGATCY 1 cut(s) 1431
BstZ17I GTATAC 1 cut(s) 727
BsuRI GGCC 6 cut(s) 50, 104, 408, 849, 1168, 1493
BtgI CCRYGG 1 cut(s) 44
BtgZI GCGATG 1 cut(s) 23
BtrI CACGTC 1 cut(s) 1177
BtsCI GGATG 5 cut(s) 82, 303, 517, 1243, 1384
BtsIMutI CAGTG 2 cut(s) 141, 843
Cac8I GCNNGC 5 cut(s) 317, 321, 637, 823, 1470
CciI TCATGA 1 cut(s) 976
CfoI GCGC 7 cut(s) 17, 346, 354, 544, 616, 827, 1230
Cfr10I RCCGGY 1 cut(s) 709
Cfr13I GGNCC 6 cut(s) 48, 361, 715, 935, 1166, 1492
Csp6I GTAC 3 cut(s) 387, 555, 921
CviQI GTAC 3 cut(s) 387, 555, 921
DdeI CTNAG 7 cut(s) 133, 155, 784, 1199, 1323, 1368, 1454
DpnI GATC 8 cut(s) 228, 327, 630, 1050, 1082, 1210, 1242, 1433
DpnII GATC 8 cut(s) 226, 325, 628, 1048, 1080, 1208, 1240, 1431
EaeI YGGCCR 1 cut(s) 847
Eam1104I CTCTTC 2 cut(s) 416, 1506
EarI CTCTTC 2 cut(s) 416, 1506
EciI GGCGGA 1 cut(s) 707
Eco130I CCWWGG 3 cut(s) 44, 347, 582
Eco47I GGWCC 3 cut(s) 361, 715, 935
Eco57I CTGAAG 2 cut(s) 1080, 1421
Eco88I CYCGRG 1 cut(s) 609
EcoNI CCTNNNNNAGG 1 cut(s) 1186
EcoO109I RGGNCCY 1 cut(s) 361
EcoRII CCWGG 5 cut(s) 222, 445, 720, 913, 1314
EcoT14I CCWWGG 3 cut(s) 44, 347, 582
EcoT22I ATGCAT 1 cut(s) 837
ErhI CCWWGG 3 cut(s) 44, 347, 582
Esp3I CGTCTC 1 cut(s) 154
FalI AAGNNNNNCTT 4 cut(s) 422, 454, 1020, 1052
FaqI GGGAC 2 cut(s) 272, 1124
FauI CCCGC 1 cut(s) 537
FbaI TGATCA 1 cut(s) 1048
FblI GTMKAC 1 cut(s) 726
Fnu4HI GCNGC 7 cut(s) 33, 36, 266, 707, 996, 1062, 1466
FokI GGATG 5 cut(s) 69, 290, 504, 1230, 1391
Fsp4HI GCNGC 7 cut(s) 33, 36, 266, 707, 996, 1062, 1466
FspBI CTAG 6 cut(s) 617, 696, 906, 1424, 1469, 1473
FspI TGCGCA 1 cut(s) 826
GlaI GCGC 7 cut(s) 16, 345, 353, 543, 615, 826, 1229
GluI GCNGC 7 cut(s) 33, 36, 266, 707, 996, 1062, 1466
GsuI CTGGAG 1 cut(s) 156
HaeII RGCGCY 4 cut(s) 18, 347, 355, 617
HaeIII GGCC 6 cut(s) 50, 104, 408, 849, 1168, 1493
HapII CCGG 2 cut(s) 18, 710
HhaI GCGC 7 cut(s) 17, 346, 354, 544, 616, 827, 1230
Hin6I GCGC 7 cut(s) 15, 344, 352, 542, 614, 825, 1228
HinP1I GCGC 7 cut(s) 15, 344, 352, 542, 614, 825, 1228
HincII GTYRAC 1 cut(s) 1384
HindII GTYRAC 1 cut(s) 1384
HindIII AAGCTT 1 cut(s) 1325
HinfI GANTC 7 cut(s) 140, 665, 814, 854, 1112, 1333, 1348
HpaII CCGG 2 cut(s) 18, 710
HphI GGTGA 3 cut(s) 674, 1203, 1276
Hpy166II GTNNAC 5 cut(s) 622, 727, 841, 1288, 1384
Hpy188I TCNGA 6 cut(s) 416, 488, 765, 1206, 1332, 1440
Hpy188III TCNNGA 4 cut(s) 27, 933, 977, 1505
Hpy8I GTNNAC 5 cut(s) 622, 727, 841, 1288, 1384
Hpy99I CGWCG 2 cut(s) 372, 407
HpyAV CCTTC 5 cut(s) 61, 467, 657, 1192, 1445
HpyCH4III ACNGT 1 cut(s) 925
HpyCH4IV ACGT 3 cut(s) 198, 624, 1176
HpyCH4V TGCA 5 cut(s) 38, 393, 565, 835, 1151
HpyF10VI GCNNNNNNNGC 6 cut(s) 14, 271, 343, 652, 971, 1091
HpyF3I CTNAG 7 cut(s) 133, 155, 784, 1199, 1323, 1368, 1454
HpySE526I ACGT 3 cut(s) 198, 624, 1176
HspAI GCGC 7 cut(s) 15, 344, 352, 542, 614, 825, 1228
Ksp22I TGATCA 1 cut(s) 1048
Kzo9I GATC 8 cut(s) 226, 325, 628, 1048, 1080, 1208, 1240, 1431
LguI GCTCTTC 1 cut(s) 1506
LmnI GCTCC 2 cut(s) 334, 586
Lsp1109I GCAGC 5 cut(s) 22, 252, 718, 982, 1452
LweI GCATC 1 cut(s) 526
MaeI CTAG 6 cut(s) 617, 696, 906, 1424, 1469, 1473
MaeII ACGT 3 cut(s) 198, 624, 1176
MaeIII GTNAC 2 cut(s) 1135, 1264
MalI GATC 8 cut(s) 228, 327, 630, 1050, 1082, 1210, 1242, 1433
MbiI CCGCTC 1 cut(s) 32
MboI GATC 8 cut(s) 226, 325, 628, 1048, 1080, 1208, 1240, 1431
MboII GAAGA 3 cut(s) 403, 642, 1493
MflI RGATCY 1 cut(s) 1431
MhlI GDGCHC 1 cut(s) 1480
MlsI TGGCCA 1 cut(s) 849
MluCI AATT 8 cut(s) 161, 238, 537, 593, 1008, 1016, 1220, 1399
MluNI TGGCCA 1 cut(s) 849
MlyI GAGTC 3 cut(s) 149, 1106, 1327
MmeI TCCRAC 3 cut(s) 439, 549, 1218
Mox20I TGGCCA 1 cut(s) 849
Mph1103I ATGCAT 1 cut(s) 837
MroXI GAANNNNTTC 2 cut(s) 239, 280
MscI TGGCCA 1 cut(s) 849
MseI TTAA 3 cut(s) 309, 1007, 1338
MslI CAYNNNNRTG 3 cut(s) 43, 1293, 1391
Msp20I TGGCCA 1 cut(s) 849
MspCI CTTAAG 2 cut(s) 308, 1337
MspI CCGG 2 cut(s) 18, 710
MspR9I CCNGG 5 cut(s) 224, 447, 722, 915, 1316
Mva1269I GAATGC 1 cut(s) 1069
MvaI CCWGG 5 cut(s) 224, 447, 722, 915, 1316
MvnI CGCG 1 cut(s) 544
MwoI GCNNNNNNNGC 6 cut(s) 14, 271, 343, 652, 971, 1091
NcoI CCATGG 1 cut(s) 44
NdeII GATC 8 cut(s) 226, 325, 628, 1048, 1080, 1208, 1240, 1431
NheI GCTAGC 1 cut(s) 1468
NlaIV GGNNCC 3 cut(s) 22, 336, 1433
NmuCI GTSAC 2 cut(s) 1135, 1264
NsbI TGCGCA 1 cut(s) 826
NsiI ATGCAT 1 cut(s) 837
NspI RCATGY 5 cut(s) 42, 393, 825, 839, 1234
PaeI GCATGC 1 cut(s) 825
PagI TCATGA 1 cut(s) 976
PciSI GCTCTTC 1 cut(s) 1506
PctI GAATGC 1 cut(s) 1069
PdmI GAANNNNTTC 2 cut(s) 239, 280
PfeI GAWTC 4 cut(s) 665, 814, 854, 1348
PkrI GCNGC 7 cut(s) 34, 37, 267, 708, 997, 1063, 1467
PleI GAGTC 3 cut(s) 148, 1106, 1327
PpsI GAGTC 3 cut(s) 148, 1106, 1327
PpuMI RGGWCCY 1 cut(s) 361
PshAI GACNNNNGTC 1 cut(s) 1271
Psp1406I AACGTT 1 cut(s) 624
Psp5II RGGWCCY 1 cut(s) 361
Psp6I CCWGG 5 cut(s) 222, 445, 720, 913, 1314
PspGI CCWGG 5 cut(s) 222, 445, 720, 913, 1314
PspN4I GGNNCC 3 cut(s) 22, 336, 1433
PspPI GGNCC 6 cut(s) 48, 361, 715, 935, 1166, 1492
PspPPI RGGWCCY 1 cut(s) 361
PsuI RGATCY 1 cut(s) 1431
RsaI GTAC 3 cut(s) 388, 556, 922
RsaNI GTAC 3 cut(s) 387, 555, 921
RseI CAYNNNNRTG 3 cut(s) 43, 1293, 1391
SapI GCTCTTC 1 cut(s) 1506
SaqAI TTAA 3 cut(s) 309, 1007, 1338
SatI GCNGC 7 cut(s) 33, 36, 266, 707, 996, 1062, 1466
Sau3AI GATC 8 cut(s) 226, 325, 628, 1048, 1080, 1208, 1240, 1431
Sau96I GGNCC 6 cut(s) 48, 361, 715, 935, 1166, 1492
SchI GAGTC 3 cut(s) 149, 1106, 1327
ScrFI CCNGG 5 cut(s) 224, 447, 722, 915, 1316
SduI GDGCHC 1 cut(s) 1480
SfaNI GCATC 1 cut(s) 526
SfcI CTRYAG 1 cut(s) 768
SinI GGWCC 3 cut(s) 361, 715, 935
SmiMI CAYNNNNRTG 3 cut(s) 43, 1293, 1391
SmlI CTYRAG 6 cut(s) 25, 308, 499, 1186, 1337, 1479
SmoI CTYRAG 6 cut(s) 25, 308, 499, 1186, 1337, 1479
SphI GCATGC 1 cut(s) 825
Sse9I AATT 8 cut(s) 161, 238, 537, 593, 1008, 1016, 1220, 1399
SsiI CCGC 5 cut(s) 32, 183, 544, 718, 1062
SspI AATATT 1 cut(s) 682
SspMI CTAG 6 cut(s) 617, 696, 906, 1424, 1469, 1473
StyD4I CCNGG 5 cut(s) 222, 445, 720, 913, 1314
StyI CCWWGG 3 cut(s) 44, 347, 582
TaaI ACNGT 1 cut(s) 925
TaiI ACGT 3 cut(s) 201, 627, 1179
TasI AATT 8 cut(s) 161, 238, 537, 593, 1008, 1016, 1220, 1399
TatI WGTACW 1 cut(s) 920
TauI GCSGC 2 cut(s) 35, 1064
TfiI GAWTC 4 cut(s) 665, 814, 854, 1348
Tru1I TTAA 3 cut(s) 309, 1007, 1338
Tru9I TTAA 3 cut(s) 309, 1007, 1338
TscAI CASTG 2 cut(s) 141, 850
TseFI GTSAC 2 cut(s) 1135, 1264
TseI GCWGC 5 cut(s) 35, 265, 706, 995, 1465
Tsp45I GTSAC 2 cut(s) 1135, 1264
TspDTI ATGAA 3 cut(s) 225, 308, 1475
TspRI CASTG 2 cut(s) 141, 850
Vha464I CTTAAG 2 cut(s) 308, 1337
VpaK11BI GGWCC 3 cut(s) 361, 715, 935
XagI CCTNNNNNAGG 1 cut(s) 1186
XapI RAATTY 3 cut(s) 238, 593, 1399
XceI RCATGY 5 cut(s) 42, 393, 825, 839, 1234
XcmI CCANNNNNNNNNTGG 1 cut(s) 345
XmiI GTMKAC 1 cut(s) 726
XmnI GAANNNNTTC 2 cut(s) 239, 280
XspI CTAG 6 cut(s) 617, 696, 906, 1424, 1469, 1473
Zsp2I ATGCAT 1 cut(s) 837
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.