Rmu_sc0005242.1_g000002

acid phosphatase activity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0005242.1
OG0000044
Physical Location & Seq
Forward (+)
5253 .. 9438
4186 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0005242.1_g000002.1.cds

Sequence Viewer

Length: 2037 bp
atgcctcctccacctccctcccctgccaggccggcagccactatcgtggccggtgacacacccccaaaccctacgccaaccttcgcttcaatcctctcagtcgttcaaccactagggtttgcaattgatgatctcccaacgccttcagttgagcatggagttgctatagttcaaattttagaagattctttccagcgtgggttggatcggtgcaagacaatcctcgttgggaaactcctttcgccaccgaatgtgttaatcaagtggtcgtcgtcgttctctccagcaacatacaagaacacctttgcgcagatttgggttcgtttttgggacttagggtttgcctactgggatcaccagacactttttgaaattgcacgaggagttggtttctatgcaagagttttggttgctgtcgatctttcaaaatctctctgtgaacaagttagggttgtgcgcacacatggagaatcggtgattgccacggttgactatgagtcagtcccagtgatttgtcaagcctgtggcattgttggtcatcctgtcaacaagtgtaggaacaggacgaagccaccagggcgtgatcaaagcggtgaagcttctgaactgccatccaacaaaaatcagtgcacataccagctagatggtgatccggtggtagctgggcgcgggtgcttccgatcatggaggaaccgtcgtacacgtcgacgctcccggcaggtaactgtgctgccaaaaaaggaccttgtggcggatgcaagcttacccccacctccttctgctggccaaccaactgctatcacacatgaaaatgtaattgttctaaccgtccaaaatctaccagaacaactagtgcctactagcttccaagatgttgttgcacggcatacagtggagccagttttggctgacgttggagcgacctcctcctcctccactgcttctgtacccccaggtgtggacgttgaggtcacttcaacaggggcttttgatgtctctgacctggacattgaaactgaaaacttggtcagtggtacgctagaggatggcgagttcatccctgttaggtccaagaagtccatgaagttgcctaaacctttagttaaaactaaagttaagcctaagcagggggctaataaccacagtacaaagttggcacttgttcacaaagctatcggtctacaggtcctacatgtgactgctcaacaaatcacggtatcctgttcattcgactgtgtgcatggcatatatacatgcgtctatgccaaaaccactatggctgggcgtagactcctctggttggacttgcgttatgtaagagcgaactgggttcttgggccttggctggtttttggtgatttcaattgtgtttttggtgctcatgaaaaatggggaggaaacacaccctctgcaagatcctacctggacttccaacaaatgtgcaattcttgtgctttgcttgacattcccactaagggattggcctttacgtggactaatcgtcgcactgagtgttgcaccctcactagagccacatctgaccattgccctattctcttgacttgtttgaaattcatgaatgtcattaagtctacattccgattccaaagttgctggcttcaacaaccaaactttatgtcattggttagagatttttgggacacgctgcagttttttgggtgccctcagtttgtcttggcttccaagctaagggcgttgaaggtgatgcttaagtcctggagccgaaactccattggggatgttcatttaagggttaaagttccaaatagactttggatgcggttcaagaggagatttctagacttggtcctacagaggatagattctcaccggaagaccccatgcacggttcttatccgatctttctttgcaagctacttttcttctagattagtctcgtatccaatggttaaaatatggggacatgaatacctcttttcttcacaatatggtcaaaatcaggctcttaaacaaatcgatcacatcacttttggtgaatcaagaggtcatcaatga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RVT_1 RVT_3

Protein Analysis

678

Amino Acids

75.7

Weight (kDa)

9.38

Isoelectric Point (pI)

47.62

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000044)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G07760 AT5G28823
fragaria_vesca FvH4_1g13572 FvH4_2g03281 FvH4_2g04691 FvH4_2g08332 FvH4_2g08333 FvH4_2g15313 FvH4_2g26101 FvH4_2g29541 FvH4_3g06911 FvH4_3g34351 FvH4_3g43733 FvH4_4g02432 FvH4_4g05601 FvH4_4g08213 FvH4_4g09961 FvH4_4g10131 FvH4_4g20001 FvH4_4g20002 FvH4_5g01051 FvH4_5g01401 FvH4_5g27943 FvH4_6g09220 FvH4_6g17383 FvH4_6g35491 FvH4_6g46421 FvH4_7g04151 FvH4_7g13962 FvH4_7g18611 FvH4_7g19491 FvH4_7g19511 FvH4_7g26562
malus_domestica MD06G1221600.v1.1
pyrus_communis pycom10g21150
rosa_chinensis RchiOBHm_Chr1g0337571 RchiOBHm_Chr2g0168771 RchiOBHm_Chr3g0453631 RchiOBHm_Chr6g0278581
rosa_laevigata RLG00000001899 RLG00000001925 RLG00000002026 RLG00000003410 RLG00000003767 RLG00000004304 RLG00000004473 RLG00000004677 RLG00000006856 RLG00000007994 RLG00000009888 RLG00000011627 RLG00000012174 RLG00000012217 RLG00000013118 RLG00000013736 RLG00000014194 RLG00000014251 RLG00000015011 RLG00000015057 RLG00000015235 RLG00000017416 RLG00000018052 RLG00000018537 RLG00000019968 RLG00000020096 RLG00000020263 RLG00000022606 RLG00000023119 RLG00000028111 RLG00000029686 RLG00000030126 RLG00000031124 RLG00000031236 RLG00000032766 RLG00000033171 RLG00000033548 RLG00000033987 RLG00000034062 RLG00000035115 RLG00000035863
rosa_multiflora Rmu_co8036712.1_g000001 Rmu_co8080248.1_g000001 Rmu_co8208334.1_g000001 Rmu_co8253451.1_g000001 Rmu_co8393241.1_g000001 Rmu_co8522225.1_g000005 Rmu_sc0000060.1_g000030 Rmu_sc0000060.1_g000031 Rmu_sc0000060.1_g000032 Rmu_sc0000090.1_g000008 Rmu_sc0000149.1_g000051 Rmu_sc0000149.1_g000058 Rmu_sc0000309.1_g000050 Rmu_sc0000370.1_g000022 Rmu_sc0000370.1_g000023 Rmu_sc0000370.1_g000024 Rmu_sc0000418.1_g000018 Rmu_sc0000427.1_g000014 Rmu_sc0000427.1_g000015 Rmu_sc0000434.1_g000008 Rmu_sc0000487.1_g000038 Rmu_sc0000487.1_g000039 Rmu_sc0000569.1_g000029 Rmu_sc0000580.1_g000097 Rmu_sc0000595.1_g000068 Rmu_sc0000607.1_g000027 Rmu_sc0000738.1_g000004 Rmu_sc0000758.1_g000001 Rmu_sc0000758.1_g000002 Rmu_sc0000870.1_g000019 Rmu_sc0000924.1_g000040 Rmu_sc0000924.1_g000041 Rmu_sc0000999.1_g000037 Rmu_sc0001001.1_g000001 Rmu_sc0001010.1_g000080 Rmu_sc0001075.1_g000041 Rmu_sc0001097.1_g000016 Rmu_sc0001173.1_g000020 Rmu_sc0001258.1_g000010 Rmu_sc0001425.1_g000031 Rmu_sc0001493.1_g000020 Rmu_sc0001493.1_g000021 Rmu_sc0001644.1_g000024 Rmu_sc0001648.1_g000039 Rmu_sc0001662.1_g000002 Rmu_sc0001849.1_g000046 Rmu_sc0001851.1_g000038 Rmu_sc0001861.1_g000006 Rmu_sc0001899.1_g000008 Rmu_sc0002231.1_g000023 Rmu_sc0002393.1_g000012 Rmu_sc0002515.1_g000010 Rmu_sc0002551.1_g000013 Rmu_sc0002680.1_g000029 Rmu_sc0002700.1_g000030 Rmu_sc0002700.1_g000031 Rmu_sc0002709.1_g000035 Rmu_sc0002779.1_g000017 Rmu_sc0003267.1_g000040 Rmu_sc0003306.1_g000009 Rmu_sc0003338.1_g000014 Rmu_sc0003522.1_g000038 Rmu_sc0003522.1_g000039 Rmu_sc0003653.1_g000031 Rmu_sc0003901.1_g000003 Rmu_sc0003920.1_g000009 Rmu_sc0004014.1_g000009 Rmu_sc0004016.1_g000013 Rmu_sc0004031.1_g000002 Rmu_sc0004106.1_g000001 Rmu_sc0004432.1_g000004 Rmu_sc0004481.1_g000020 Rmu_sc0004874.1_g000005 Rmu_sc0004928.1_g000005 Rmu_sc0005065.1_g000053 Rmu_sc0005091.1_g000005 Rmu_sc0005217.1_g000015 Rmu_sc0005242.1_g000002 Rmu_sc0005300.1_g000011 Rmu_sc0005400.1_g000004 Rmu_sc0005486.1_g000007 Rmu_sc0005527.1_g000015 Rmu_sc0006059.1_g000021 Rmu_sc0006087.1_g000004 Rmu_sc0006184.1_g000006 Rmu_sc0006184.1_g000007 Rmu_sc0006578.1_g000006 Rmu_sc0006730.1_g000010 Rmu_sc0006736.1_g000030 Rmu_sc0006736.1_g000033 Rmu_sc0007333.1_g000018 Rmu_sc0007856.1_g000010 Rmu_sc0008231.1_g000003 Rmu_sc0009862.1_g000012 Rmu_sc0010547.1_g000001 Rmu_sc0010547.1_g000003 Rmu_sc0010632.1_g000012 Rmu_sc0010747.1_g000008 Rmu_sc0011075.1_g000009 Rmu_sc0011565.1_g000004 Rmu_sc0011641.1_g000003 Rmu_sc0013102.1_g000013 Rmu_sc0013160.1_g000006 Rmu_sc0014846.1_g000004 Rmu_sc0017037.1_g000003 Rmu_sc0018203.1_g000001 Rmu_sc0018204.1_g000001 Rmu_sc0018348.1_g000001 Rmu_sc0019354.1_g000002 Rmu_sc0021630.1_g000002 Rmu_sc0022987.1_g000002 Rmu_sc0024469.1_g000005 Rmu_sc0033519.1_g000001 Rmu_sc0033519.1_g000002 Rmu_sc0033519.1_g000003 Rmu_sc0042775.1_g000001 Rmu_ssc0000110.1_g000003 Rmu_ssc0000110.1_g000004 Rmu_ssc0000126.1_g000068 Rmu_ssc0000200.1_g000007 Rmu_ssc0000295.1_g000003 Rmu_ssc0000295.1_g000004 Rmu_ssc0000299.1_g000010 Rmu_ssc0000308.1_g000024 Rmu_ssc0000339.1_g000006 Rmu_ssc0000385.1_g000012 Rmu_ssc0000409.1_g000004 Rmu_ssc0000421.1_g000004
rosa_roxburghii Rroxscaffold_156G00440360 Rroxscaffold_166G00440800 Rroxscaffold_1G00039040 Rroxscaffold_1G00039050 Rroxscaffold_1G00073950 Rroxscaffold_2G00091710 Rroxscaffold_2G00120050 Rroxscaffold_2G00122590 Rroxscaffold_3G00219700 Rroxscaffold_3G00264140 Rroxscaffold_4G00290600 Rroxscaffold_4G00323610 Rroxscaffold_4G00328460 Rroxscaffold_5G00343440 Rroxscaffold_5G00343570 Rroxscaffold_5G00378540 Rroxscaffold_5G00385090 Rroxscaffold_7G00169130 Rroxscaffold_7G00216420
rosa_rugosa Rorug01G0065800 Rorug01G0073500 Rorug01G0091700 Rorug01G0096500 Rorug01G0204700.1 Rorug01G0249100 Rorug01G0333800 Rorug01G0333900 Rorug01G0339500 Rorug01G0431300 Rorug02G0085400 Rorug02G0117500 Rorug02G0130900 Rorug02G0178800 Rorug02G0226700 Rorug02G0336300 Rorug02G0338700 Rorug02G0351400 Rorug02G0459900 Rorug03G0187000 Rorug03G0223700 Rorug03G0291300 Rorug03G0291300 Rorug03G0311100 Rorug03G0316900 Rorug03G0346000 Rorug04G0014500 Rorug04G0014600 Rorug04G0124100 Rorug04G0136500 Rorug04G0302000 Rorug04G0338100 Rorug04G0338200 Rorug04G0413100 Rorug05G0182200 Rorug05G0226500 Rorug05G0273300 Rorug05G0292200 Rorug05G0292200 Rorug05G0392500 Rorug05G0394500 Rorug05G0394600 Rorug05G0505600.1 Rorug06G0351400 Rorug06G0393400 Rorug06G0393600 Rorug06G0470000 Rorug07G0063100 Rorug07G0086800 Rorug07G0109200 Rorug07G0236100
rosa_samantha Rh1AG010800 Rh1AG011100 Rh1AG064900 Rh1AG088000 Rh1AG207100 Rh1AG262000 Rh1AG300800 Rh1BG043000 Rh1BG144600 Rh1BG180700 Rh1BG180800 Rh1BG328800 Rh1BG399400 Rh1CG041400 Rh1CG047300 Rh1CG379700 Rh1DG036500 Rh1DG083000 Rh1DG210700 Rh1DG210800 Rh1DG231100 Rh2AG007900 Rh2AG055500 Rh2AG339100 Rh2AG368100 Rh2BG243300 Rh2BG258900 Rh2BG292000 Rh2BG333500 Rh2BG387300 Rh2BG612800 Rh2BG619100 Rh2CG026500 Rh2CG163600 Rh2CG535700 Rh2DG186400 Rh2DG235000 Rh2DG314500 Rh2DG388500 Rh2DG391400 Rh2DG496900 Rh2DG526700 Rh2DG570700 Rh3AG330700 Rh3BG266900 Rh3CG236000 Rh3CG340400 Rh3DG090000 Rh3DG278400 Rh3DG297600 Rh3DG362600 Rh4AG001300 Rh4AG023300 Rh4AG097100 Rh4AG427000 Rh4BG029400 Rh4BG032400 Rh4BG086000 Rh4BG249200 Rh4CG001900 Rh4CG040600 Rh4CG093000 Rh4CG106300 Rh4CG113200 Rh4CG113900 Rh4DG002300 Rh4DG144400 Rh4DG234200 Rh5AG043700 Rh5AG084900 Rh5AG161500 Rh5AG409000 Rh5AG457200 Rh5AG457900 Rh5AG473700 Rh5AG520600 Rh5BG042100 Rh5BG124100 Rh5BG323500 Rh5BG417200 Rh5BG443700 Rh5BG451500 Rh5BG464900 Rh5BG470400 Rh5BG522500 Rh5CG068800 Rh5CG178300 Rh5CG231000 Rh5CG258600 Rh5CG394500 Rh5CG473700 Rh5DG164700 Rh5DG235400 Rh5DG261300 Rh5DG304900 Rh5DG334500 Rh5DG424300 Rh5DG458400 Rh5DG478600 Rh5DG552300 Rh5DG552700 Rh6AG037000 Rh6AG042100 Rh6AG255500 Rh6AG283400 Rh6AG291800 Rh6BG049600 Rh6BG080700 Rh6BG114600 Rh6BG128900 Rh6BG352500 Rh6CG052400 Rh6CG112900 Rh6CG113000 Rh6CG131300 Rh6CG157700 Rh6CG243200 Rh6CG254100 Rh6CG275700 Rh6CG299700 Rh6CG309100 Rh6CG317600 Rh6CG342600 Rh6CG471900 Rh6DG038200 Rh6DG102300 Rh6DG114400 Rh6DG225900 Rh6DG292900 Rh6DG320700 Rh6DG512800 Rh7AG217700 Rh7AG313900 Rh7AG446000 Rh7AG472600 Rh7BG223100 Rh7BG349900 Rh7BG352000 Rh7CG160200 Rh7CG233900 Rh7CG242700 Rh7CG273900 Rh7CG306400 Rh7CG322200 Rh7DG053800 Rh7DG077800 Rh7DG227700 Rh7DG404800
rosa_wichuraiana Rw0G003990 Rw2G022110 Rw2G024890 Rw6G005700 Rw7G008770

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 968
Acc16I TGCGCA 2 cut(s) 309, 458
Acc36I ACCTGC 1 cut(s) 709
AccB1I GGYRCC 1 cut(s) 1680
AccI GTMKAC 4 cut(s) 706, 1180, 1288, 1592
AccII CGCG 1 cut(s) 669
AciI CCGC 4 cut(s) 591, 669, 752, 1801
AclWI GGATC 4 cut(s) 213, 360, 644, 1410
AcoI YGGCCR 2 cut(s) 48, 784
AcsI RAATTY 2 cut(s) 174, 1571
AcuI CTGAAG 1 cut(s) 129
AdeI CACNNNGTG 1 cut(s) 1512
AfaI GTAC 4 cut(s) 700, 948, 1036, 1147
AflII CTTAAG 1 cut(s) 1730
AflIII ACRYGT 2 cut(s) 701, 1192
AhdI GACNNNNNGTC 2 cut(s) 496, 1500
AhlI ACTAGT 1 cut(s) 850
AjiI CACGTC 1 cut(s) 704
AjnI CCWGG 6 cut(s) 26, 574, 952, 1002, 1422, 1736
AjuI GAANNNNNNNTTGG 2 cut(s) 70, 102
AleI CACNNNNGTG 1 cut(s) 44
AloI GAACNNNNNNTCC 2 cut(s) 1037, 1069
AluBI AGCT 8 cut(s) 599, 640, 662, 762, 864, 1172, 1708, 1896
AluI AGCT 8 cut(s) 599, 640, 662, 762, 864, 1172, 1708, 1896
Alw21I GWGCWC 2 cut(s) 632, 1381
Alw26I GTCTC 2 cut(s) 1000, 1921
Alw44I GTGCAC 1 cut(s) 628
AlwI GGATC 4 cut(s) 213, 360, 644, 1410
AoxI GGCC 5 cut(s) 29, 48, 784, 1337, 1482
ApaLI GTGCAC 1 cut(s) 628
ApeKI GCWGC 3 cut(s) 35, 730, 1666
ApoI RAATTY 2 cut(s) 174, 1571
ArsI GACNNNNNNTTYG 4 cut(s) 323, 355, 1622, 1654
AspLEI GCGC 3 cut(s) 310, 459, 669
AspS9I GGNCC 5 cut(s) 742, 1068, 1186, 1337, 1828
AsuC2I CCSGG 1 cut(s) 715
AsuHPI GGTGA 9 cut(s) 65, 347, 487, 605, 659, 1367, 1735, 1841, 2027
AvaII GGWCC 4 cut(s) 742, 1068, 1186, 1828
BaeGI GKGCMC 2 cut(s) 632, 1685
BalI TGGCCA 1 cut(s) 786
BanI GGYRCC 1 cut(s) 1680
BauI CACGAG 1 cut(s) 378
BbsI GAAGAC 1 cut(s) 1862
Bbv12I GWGCWC 2 cut(s) 632, 1381
BbvI GCAGC 3 cut(s) 47, 717, 1653
BccI CCATC 3 cut(s) 619, 638, 1040
BceAI ACGGC 1 cut(s) 899
BciT130I CCWGG 6 cut(s) 28, 576, 954, 1004, 1424, 1738
BciVI GTATCC 2 cut(s) 1228, 1932
BclI TGATCA 1 cut(s) 583
BcnI CCSGG 1 cut(s) 715
BcoDI GTCTC 2 cut(s) 1000, 1921
BcuI ACTAGT 1 cut(s) 850
BfaI CTAG 8 cut(s) 113, 641, 851, 861, 1040, 1527, 1820, 1908
BfmI CTRYAG 4 cut(s) 165, 1181, 1667, 1832
BfrI CTTAAG 1 cut(s) 1730
BfuAI ACCTGC 1 cut(s) 709
BfuI GTATCC 2 cut(s) 1228, 1932
BglI GCCNNNNNGGC 2 cut(s) 32, 577
BisI GCNGC 3 cut(s) 36, 731, 1667
BlsI GCNGC 3 cut(s) 37, 732, 1668
Bme1390I CCNGG 7 cut(s) 28, 576, 715, 954, 1004, 1424, 1738
Bme18I GGWCC 4 cut(s) 742, 1068, 1186, 1828
BmeRI GACNNNNNGTC 2 cut(s) 496, 1500
BmgBI CACGTC 1 cut(s) 704
BmgT120I GGNCC 5 cut(s) 742, 1068, 1186, 1337, 1828
BmiI GGNNCC 4 cut(s) 692, 897, 1682, 1742
BmrFI CCNGG 7 cut(s) 28, 576, 715, 954, 1004, 1424, 1738
BmrI ACTGGG 3 cut(s) 358, 500, 1336
BmsI GCATC 3 cut(s) 745, 1716, 1788
BmuI ACTGGG 3 cut(s) 358, 500, 1336
BpiI GAAGAC 1 cut(s) 1862
BpmI CTGGAG 2 cut(s) 267, 1759
Bpu10I CCTNAGC 2 cut(s) 1122, 1709
BpuMI CCSGG 1 cut(s) 715
Bsa29I ATCGAT 1 cut(s) 1998
BsaAI YACGTR 1 cut(s) 1491
BsaBI GATNNNNATC 1 cut(s) 648
BsaJI CCNNGG 4 cut(s) 483, 575, 952, 1340
BsaWI WCCGGW 2 cut(s) 652, 1851
BsaXI ACNNNNNCTCC 4 cut(s) 459, 489, 679, 709
Bse118I RCCGGY 2 cut(s) 31, 50
Bse1I ACTGG 4 cut(s) 353, 506, 899, 1331
Bse3DI GCAATG 1 cut(s) 1543
Bse8I GATNNNNATC 1 cut(s) 648
BseBI CCWGG 6 cut(s) 28, 576, 954, 1004, 1424, 1738
BseCI ATCGAT 1 cut(s) 1998
BseDI CCNNGG 4 cut(s) 483, 575, 952, 1340
BseGI GGATG 7 cut(s) 538, 611, 760, 1051, 1056, 1765, 1803
BseJI GATNNNNATC 1 cut(s) 648
BseMI GCAATG 1 cut(s) 1543
BseMII CTCAG 3 cut(s) 111, 1500, 1700
BseNI ACTGG 4 cut(s) 353, 506, 899, 1331
BseRI GAGGAG 6 cut(s) 396, 916, 919, 922, 1283, 1825
BseSI GKGCMC 2 cut(s) 632, 1685
BseXI GCAGC 3 cut(s) 47, 717, 1653
BseYI CCCAGC 2 cut(s) 662, 1280
Bsh1236I CGCG 1 cut(s) 669
BshFI GGCC 5 cut(s) 31, 50, 786, 1339, 1484
BshNI GGYRCC 1 cut(s) 1680
BshVI ATCGAT 1 cut(s) 1998
BsiHKAI GWGCWC 2 cut(s) 632, 1381
BsiSI CCGG 5 cut(s) 32, 51, 653, 715, 1852
BslFI GGGAC 4 cut(s) 344, 488, 1673, 1956
BsmAI GTCTC 2 cut(s) 1000, 1921
BsmFI GGGAC 4 cut(s) 344, 488, 1673, 1956
BsnI GGCC 5 cut(s) 31, 50, 786, 1339, 1484
Bsp1286I GDGCHC 3 cut(s) 632, 1381, 1685
BspACI CCGC 4 cut(s) 591, 669, 752, 1801
BspANI GGCC 5 cut(s) 31, 50, 786, 1339, 1484
BspCNI CTCAG 3 cut(s) 110, 1501, 1699
BspDI ATCGAT 1 cut(s) 1998
BspFNI CGCG 1 cut(s) 669
BspHI TCATGA 2 cut(s) 1381, 1575
BspLI GGNNCC 4 cut(s) 692, 897, 1682, 1742
BspMAI CTGCAG 1 cut(s) 1671
BspMI ACCTGC 1 cut(s) 709
BspPI GGATC 4 cut(s) 213, 360, 644, 1410
BspT107I GGYRCC 1 cut(s) 1680
BspTI CTTAAG 1 cut(s) 1730
BsrDI GCAATG 1 cut(s) 1543
BsrFI RCCGGY 2 cut(s) 31, 50
BsrI ACTGG 4 cut(s) 353, 506, 899, 1331
BssAI RCCGGY 2 cut(s) 31, 50
BssECI CCNNGG 4 cut(s) 483, 575, 952, 1340
BssSI CACGAG 1 cut(s) 378
BssT1I CCWWGG 1 cut(s) 1340
Bst2BI CACGAG 1 cut(s) 378
Bst2UI CCWGG 6 cut(s) 28, 576, 954, 1004, 1424, 1738
Bst4CI ACNGT 9 cut(s) 487, 695, 727, 829, 892, 1145, 1216, 1235, 1870
BstAFI CTTAAG 1 cut(s) 1730
BstBAI YACGTR 1 cut(s) 1491
BstC8I GCNNGC 5 cut(s) 33, 760, 784, 1616, 1894
BstDEI CTNAG 7 cut(s) 97, 334, 1122, 1473, 1509, 1686, 1709
BstDSI CCRYGG 1 cut(s) 483
BstF5I GGATG 7 cut(s) 538, 611, 760, 1051, 1056, 1765, 1803
BstFNI CGCG 1 cut(s) 669
BstHHI GCGC 3 cut(s) 310, 459, 669
BstMAI GTCTC 2 cut(s) 1000, 1921
BstMWI GCNNNNNNNGC 2 cut(s) 32, 577
BstNI CCWGG 6 cut(s) 28, 576, 954, 1004, 1424, 1738
BstNSI RCATGY 2 cut(s) 1196, 1257
BstSCI CCNGG 7 cut(s) 26, 574, 713, 952, 1002, 1422, 1736
BstSFI CTRYAG 4 cut(s) 165, 1181, 1667, 1832
BstSLI GKGCMC 2 cut(s) 632, 1685
BstUI CGCG 1 cut(s) 669
BstV1I GCAGC 3 cut(s) 47, 717, 1653
BstV2I GAAGAC 1 cut(s) 1862
BstX2I RGATCY 1 cut(s) 1415
BstXI CCANNNNNNTGG 2 cut(s) 46, 644
BstYI RGATCY 1 cut(s) 1415
Bsu15I ATCGAT 1 cut(s) 1998
BsuI GTATCC 2 cut(s) 1228, 1932
BsuRI GGCC 5 cut(s) 31, 50, 786, 1339, 1484
BsuTUI ATCGAT 1 cut(s) 1998
BtgI CCRYGG 1 cut(s) 483
BtrI CACGTC 1 cut(s) 704
BtsCI GGATG 7 cut(s) 538, 611, 760, 1051, 1056, 1765, 1803
BtsI GCAGTG 1 cut(s) 936
BtsIMutI CAGTG 6 cut(s) 513, 632, 897, 936, 1036, 1506
BveI ACCTGC 1 cut(s) 709
Cac8I GCNNGC 5 cut(s) 33, 760, 784, 1616, 1894
CciI TCATGA 2 cut(s) 1381, 1575
CfoI GCGC 3 cut(s) 310, 459, 669
Cfr10I RCCGGY 2 cut(s) 31, 50
Cfr13I GGNCC 5 cut(s) 742, 1068, 1186, 1337, 1828
ClaI ATCGAT 1 cut(s) 1998
CseI GACGC 2 cut(s) 717, 1246
Csp6I GTAC 4 cut(s) 699, 947, 1035, 1146
CviQI GTAC 4 cut(s) 699, 947, 1035, 1146
DdeI CTNAG 7 cut(s) 97, 334, 1122, 1473, 1509, 1686, 1709
DraIII CACNNNGTG 1 cut(s) 1512
DrdI GACNNNNNNGTC 1 cut(s) 968
DriI GACNNNNNGTC 2 cut(s) 496, 1500
DseDI GACNNNNNNGTC 1 cut(s) 968
EaeI YGGCCR 2 cut(s) 48, 784
Eam1105I GACNNNNNGTC 2 cut(s) 496, 1500
EciI GGCGGA 1 cut(s) 767
Eco130I CCWWGG 1 cut(s) 1340
Eco47I GGWCC 4 cut(s) 742, 1068, 1186, 1828
Eco57I CTGAAG 1 cut(s) 129
EcoO109I RGGNCCY 2 cut(s) 742, 1186
EcoRII CCWGG 6 cut(s) 26, 574, 952, 1002, 1422, 1736
EcoT14I CCWWGG 1 cut(s) 1340
ErhI CCWWGG 1 cut(s) 1340
FalI AAGNNNNNCTT 2 cut(s) 287, 319
FaqI GGGAC 4 cut(s) 344, 488, 1673, 1956
FauI CCCGC 1 cut(s) 662
FbaI TGATCA 1 cut(s) 583
FblI GTMKAC 4 cut(s) 706, 1180, 1288, 1592
Fnu4HI GCNGC 3 cut(s) 36, 731, 1667
FokI GGATG 7 cut(s) 525, 598, 767, 1043, 1058, 1772, 1810
Fsp4HI GCNGC 3 cut(s) 36, 731, 1667
FspAI RTGCGCAY 1 cut(s) 458
FspBI CTAG 8 cut(s) 113, 641, 851, 861, 1040, 1527, 1820, 1908
FspI TGCGCA 2 cut(s) 309, 458
GlaI GCGC 3 cut(s) 309, 458, 668
GluI GCNGC 3 cut(s) 36, 731, 1667
GsaI CCCAGC 2 cut(s) 666, 1284
GsuI CTGGAG 2 cut(s) 267, 1759
HaeIII GGCC 5 cut(s) 31, 50, 786, 1339, 1484
HapII CCGG 5 cut(s) 32, 51, 653, 715, 1852
HgaI GACGC 2 cut(s) 717, 1246
HhaI GCGC 3 cut(s) 310, 459, 669
Hin6I GCGC 3 cut(s) 308, 457, 667
HinP1I GCGC 3 cut(s) 308, 457, 667
HincII GTYRAC 3 cut(s) 490, 547, 707
HindII GTYRAC 3 cut(s) 490, 547, 707
HindIII AAGCTT 2 cut(s) 597, 760
HinfI GANTC 7 cut(s) 185, 470, 497, 1290, 1602, 1844, 2018
HpaII CCGG 5 cut(s) 32, 51, 653, 715, 1852
HphI GGTGA 9 cut(s) 65, 347, 487, 605, 659, 1367, 1735, 1841, 2027
Hpy188I TCNGA 6 cut(s) 604, 680, 1000, 1540, 1601, 1880
Hpy188III TCNNGA 7 cut(s) 1382, 1558, 1576, 1807, 1820, 1908, 2022
Hpy99I CGWCG 6 cut(s) 274, 277, 699, 708, 711, 1506
HpyAV CCTTC 4 cut(s) 91, 153, 786, 1714
HpyCH4III ACNGT 9 cut(s) 487, 695, 727, 829, 892, 1145, 1216, 1235, 1870
HpyCH4IV ACGT 4 cut(s) 703, 912, 963, 1490
HpyF10VI GCNNNNNNNGC 2 cut(s) 32, 577
HpyF3I CTNAG 7 cut(s) 97, 334, 1122, 1473, 1509, 1686, 1709
HpySE526I ACGT 4 cut(s) 703, 912, 963, 1490
HspAI GCGC 3 cut(s) 308, 457, 667
KroI GCCGGC 1 cut(s) 31
KroNI GCCGGC 1 cut(s) 33
Ksp22I TGATCA 1 cut(s) 583
LmnI GCTCC 4 cut(s) 716, 895, 917, 1740
Lsp1109I GCAGC 3 cut(s) 47, 717, 1653
LweI GCATC 3 cut(s) 745, 1716, 1788
MaeI CTAG 8 cut(s) 113, 641, 851, 861, 1040, 1527, 1820, 1908
MaeII ACGT 4 cut(s) 703, 912, 963, 1490
MaeIII GTNAC 4 cut(s) 53, 721, 970, 1195
MboII GAAGA 4 cut(s) 194, 1867, 1896, 1953
MfeI CAATTG 2 cut(s) 123, 1363
MflI RGATCY 1 cut(s) 1415
MhlI GDGCHC 3 cut(s) 632, 1381, 1685
MlsI TGGCCA 1 cut(s) 786
MluCI AATT 7 cut(s) 123, 174, 372, 816, 1363, 1444, 1571
MluNI TGGCCA 1 cut(s) 786
MlyI GAGTC 2 cut(s) 506, 1284
MmeI TCCRAC 5 cut(s) 183, 639, 895, 1281, 1456
Mox20I TGGCCA 1 cut(s) 786
MroNI GCCGGC 1 cut(s) 31
MscI TGGCCA 1 cut(s) 786
MseI TTAA 9 cut(s) 257, 1104, 1116, 1587, 1731, 1769, 1776, 1932, 1989
MslI CAYNNNNRTG 2 cut(s) 44, 810
Msp20I TGGCCA 1 cut(s) 786
MspCI CTTAAG 1 cut(s) 1730
MspI CCGG 5 cut(s) 32, 51, 653, 715, 1852
MspR9I CCNGG 7 cut(s) 28, 576, 715, 954, 1004, 1424, 1738
MunI CAATTG 2 cut(s) 123, 1363
MvaI CCWGG 6 cut(s) 28, 576, 954, 1004, 1424, 1738
MvnI CGCG 1 cut(s) 669
MwoI GCNNNNNNNGC 2 cut(s) 32, 577
NaeI GCCGGC 1 cut(s) 33
NciI CCSGG 1 cut(s) 715
NgoMIV GCCGGC 1 cut(s) 31
NlaIV GGNNCC 4 cut(s) 692, 897, 1682, 1742
NmuCI GTSAC 3 cut(s) 53, 970, 1195
NsbI TGCGCA 2 cut(s) 309, 458
NspI RCATGY 2 cut(s) 1196, 1257
OliI CACNNNNGTG 1 cut(s) 44
PagI TCATGA 2 cut(s) 1381, 1575
PciI ACATGT 1 cut(s) 1192
PcsI WCGNNNNNNNCGW 1 cut(s) 703
PdiI GCCGGC 1 cut(s) 33
PfeI GAWTC 5 cut(s) 185, 470, 1602, 1844, 2018
PflFI GACNNNGTC 1 cut(s) 1826
PfoI TCCNGGA 1 cut(s) 1736
PkrI GCNGC 3 cut(s) 37, 732, 1668
PleI GAGTC 2 cut(s) 505, 1284
PpsI GAGTC 2 cut(s) 505, 1284
Ppu21I YACGTR 1 cut(s) 1491
PpuMI RGGWCCY 2 cut(s) 742, 1186
PscI ACATGT 1 cut(s) 1192
Psp5II RGGWCCY 2 cut(s) 742, 1186
Psp6I CCWGG 6 cut(s) 26, 574, 952, 1002, 1422, 1736
PspFI CCCAGC 2 cut(s) 662, 1280
PspGI CCWGG 6 cut(s) 26, 574, 952, 1002, 1422, 1736
PspN4I GGNNCC 4 cut(s) 692, 897, 1682, 1742
PspPI GGNCC 5 cut(s) 742, 1068, 1186, 1337, 1828
PspPPI RGGWCCY 2 cut(s) 742, 1186
PstI CTGCAG 1 cut(s) 1671
PsuI RGATCY 1 cut(s) 1415
PsyI GACNNNGTC 1 cut(s) 1826
RsaI GTAC 4 cut(s) 700, 948, 1036, 1147
RsaNI GTAC 4 cut(s) 699, 947, 1035, 1146
RseI CAYNNNNRTG 2 cut(s) 44, 810
SalI GTCGAC 1 cut(s) 705
SaqAI TTAA 9 cut(s) 257, 1104, 1116, 1587, 1731, 1769, 1776, 1932, 1989
SatI GCNGC 3 cut(s) 36, 731, 1667
Sau96I GGNCC 5 cut(s) 742, 1068, 1186, 1337, 1828
SchI GAGTC 2 cut(s) 506, 1284
ScrFI CCNGG 7 cut(s) 28, 576, 715, 954, 1004, 1424, 1738
SduI GDGCHC 3 cut(s) 632, 1381, 1685
SfaNI GCATC 3 cut(s) 745, 1716, 1788
SfcI CTRYAG 4 cut(s) 165, 1181, 1667, 1832
SgrDI CGTCGACG 1 cut(s) 705
SinI GGWCC 4 cut(s) 742, 1068, 1186, 1828
SmiMI CAYNNNNRTG 2 cut(s) 44, 810
SmlI CTYRAG 1 cut(s) 1730
SmoI CTYRAG 1 cut(s) 1730
SpeI ACTAGT 1 cut(s) 850
Sse9I AATT 7 cut(s) 123, 174, 372, 816, 1363, 1444, 1571
SsiI CCGC 4 cut(s) 591, 669, 752, 1801
SspMI CTAG 8 cut(s) 113, 641, 851, 861, 1040, 1527, 1820, 1908
StyD4I CCNGG 7 cut(s) 26, 574, 713, 952, 1002, 1422, 1736
StyI CCWWGG 1 cut(s) 1340
TaaI ACNGT 9 cut(s) 487, 695, 727, 829, 892, 1145, 1216, 1235, 1870
TaiI ACGT 4 cut(s) 706, 915, 966, 1493
TaqI TCGA 4 cut(s) 417, 706, 1230, 1998
TaqII GACCGA 1 cut(s) 1166
TasI AATT 7 cut(s) 123, 174, 372, 816, 1363, 1444, 1571
TatI WGTACW 1 cut(s) 1145
TfiI GAWTC 5 cut(s) 185, 470, 1602, 1844, 2018
Tru1I TTAA 9 cut(s) 257, 1104, 1116, 1587, 1731, 1769, 1776, 1932, 1989
Tru9I TTAA 9 cut(s) 257, 1104, 1116, 1587, 1731, 1769, 1776, 1932, 1989
TscAI CASTG 6 cut(s) 513, 632, 897, 943, 1036, 1513
TseFI GTSAC 3 cut(s) 53, 970, 1195
TseI GCWGC 3 cut(s) 35, 730, 1666
Tsp45I GTSAC 3 cut(s) 53, 970, 1195
TspDTI ATGAA 9 cut(s) 822, 1045, 1097, 1215, 1398, 1564, 1592, 1754, 1962
TspRI CASTG 6 cut(s) 513, 632, 897, 943, 1036, 1513
Tth111I GACNNNGTC 1 cut(s) 1826
Vha464I CTTAAG 1 cut(s) 1730
VneI GTGCAC 1 cut(s) 628
VpaK11BI GGWCC 4 cut(s) 742, 1068, 1186, 1828
XapI RAATTY 2 cut(s) 174, 1571
XbaI TCTAGA 2 cut(s) 1819, 1907
XceI RCATGY 2 cut(s) 1196, 1257
XcmI CCANNNNNNNNNTGG 3 cut(s) 1273, 1477, 1791
XmiI GTMKAC 4 cut(s) 706, 1180, 1288, 1592
XspI CTAG 8 cut(s) 113, 641, 851, 861, 1040, 1527, 1820, 1908
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.