Rmu_sc0000060.1_g000030

Domain of unknown function (DUF4283)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000060.1
OG0000044
Physical Location & Seq
Forward (+)
155128 .. 156570
1443 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000060.1_g000030.1.cds

Sequence Viewer

Length: 1443 bp
atggcggacgcaagtccaattaccccgtctacctcctatgcggctattctctctgataactcacccctcaactttgtaatagatgatctgccaactccttttgaggaggagggtttgatttccattcgaatctctgaggaaccttttcgtcgagggatggagagatggaaaacaaacttggtaggtcgcgtaactgttcctatcagaacaccggatctggttcaacaacttaaaaagtgttggtcatccttggaagaatggactgttgcgcctctgggtaagggttttttcatgctccaatttaaaaccctaactgatatgcaacaagtctggtctatgggatcactacgtcttcaaactgggatgctcaggcttatcaagtggtcgccgagcttctcgccatcgacctacaggaacacatttgggcaagtttgggtccgattttgggacttggggttcgctttctgggatcctcaaaccctattcgaaatttctgctggcattggcatgccattgaaattggatccccgtacaaagcaccgcactgttggactgtatgctagagtccttgtagatgttgatttctcgcaagctcccccggataaactcagaatcactagagcgaatggtgaagttgtggttgttggggttgagttggagtccgtgccccatgtttgcagcagatgtgggattattggtcataatgctgcatcgtgtagatcactgcccttggaggaggaaaggcttgctaatacagttgatcggggccgttcaaccgagcgctccaggtcaaagaaacgcaacgcaagaaggtcgcgtaggagaaggcatccatctgcacaggcgaaggttgaggtacgcgatcggaacactgtgcagatctcaaaactagccgatgtccatgagcgtggctttgaacatgtgtgcgactcagagccttcgccatctgcactggctacggacgttgctgcacccggtgcccaacagattgctaccctagccactatgcatgctctaatgccagctgtggagccagtgattgcgcacaccacggtacaggatgacgcagttgtactaggggcaattgaacagataggaaggactgatgcctgtggctcttctatactagggcaaaagcattcagagtttttccaacaggcgtgtaactcctcttctgagagtgtacctccggggtttcctagattgaaagacgtgatggaggagccatctcaatgctccaacactccaccatatgatcctatcaagattgtcgatcaagtccaggaggatgatgtggaagaaggtgaattcactcctgtgatctccaaaaagacaaagaggcttaacaagcagtctgtcaaggcaaaggaaaagttgatgcagcgcaaacctgtaacaagtcgggctctcctaaataagggagccaaacatatctctttttaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4283 zf-CCHC_4

Protein Analysis

480

Amino Acids

53.55

Weight (kDa)

8.93

Isoelectric Point (pI)

60.33

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000044)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G07760 AT5G28823
fragaria_vesca FvH4_1g13572 FvH4_2g03281 FvH4_2g04691 FvH4_2g08332 FvH4_2g08333 FvH4_2g15313 FvH4_2g26101 FvH4_2g29541 FvH4_3g06911 FvH4_3g34351 FvH4_3g43733 FvH4_4g02432 FvH4_4g05601 FvH4_4g08213 FvH4_4g09961 FvH4_4g10131 FvH4_4g20001 FvH4_4g20002 FvH4_5g01051 FvH4_5g01401 FvH4_5g27943 FvH4_6g09220 FvH4_6g17383 FvH4_6g35491 FvH4_6g46421 FvH4_7g04151 FvH4_7g13962 FvH4_7g18611 FvH4_7g19491 FvH4_7g19511 FvH4_7g26562
malus_domestica MD06G1221600.v1.1
pyrus_communis pycom10g21150
rosa_chinensis RchiOBHm_Chr1g0337571 RchiOBHm_Chr2g0168771 RchiOBHm_Chr3g0453631 RchiOBHm_Chr6g0278581
rosa_laevigata RLG00000001899 RLG00000001925 RLG00000002026 RLG00000003410 RLG00000003767 RLG00000004304 RLG00000004473 RLG00000004677 RLG00000006856 RLG00000007994 RLG00000009888 RLG00000011627 RLG00000012174 RLG00000012217 RLG00000013118 RLG00000013736 RLG00000014194 RLG00000014251 RLG00000015011 RLG00000015057 RLG00000015235 RLG00000017416 RLG00000018052 RLG00000018537 RLG00000019968 RLG00000020096 RLG00000020263 RLG00000022606 RLG00000023119 RLG00000028111 RLG00000029686 RLG00000030126 RLG00000031124 RLG00000031236 RLG00000032766 RLG00000033171 RLG00000033548 RLG00000033987 RLG00000034062 RLG00000035115 RLG00000035863
rosa_multiflora Rmu_co8036712.1_g000001 Rmu_co8080248.1_g000001 Rmu_co8208334.1_g000001 Rmu_co8253451.1_g000001 Rmu_co8393241.1_g000001 Rmu_co8522225.1_g000005 Rmu_sc0000060.1_g000030 Rmu_sc0000060.1_g000031 Rmu_sc0000060.1_g000032 Rmu_sc0000090.1_g000008 Rmu_sc0000149.1_g000051 Rmu_sc0000149.1_g000058 Rmu_sc0000309.1_g000050 Rmu_sc0000370.1_g000022 Rmu_sc0000370.1_g000023 Rmu_sc0000370.1_g000024 Rmu_sc0000418.1_g000018 Rmu_sc0000427.1_g000014 Rmu_sc0000427.1_g000015 Rmu_sc0000434.1_g000008 Rmu_sc0000487.1_g000038 Rmu_sc0000487.1_g000039 Rmu_sc0000569.1_g000029 Rmu_sc0000580.1_g000097 Rmu_sc0000595.1_g000068 Rmu_sc0000607.1_g000027 Rmu_sc0000738.1_g000004 Rmu_sc0000758.1_g000001 Rmu_sc0000758.1_g000002 Rmu_sc0000870.1_g000019 Rmu_sc0000924.1_g000040 Rmu_sc0000924.1_g000041 Rmu_sc0000999.1_g000037 Rmu_sc0001001.1_g000001 Rmu_sc0001010.1_g000080 Rmu_sc0001075.1_g000041 Rmu_sc0001097.1_g000016 Rmu_sc0001173.1_g000020 Rmu_sc0001258.1_g000010 Rmu_sc0001425.1_g000031 Rmu_sc0001493.1_g000020 Rmu_sc0001493.1_g000021 Rmu_sc0001644.1_g000024 Rmu_sc0001648.1_g000039 Rmu_sc0001662.1_g000002 Rmu_sc0001849.1_g000046 Rmu_sc0001851.1_g000038 Rmu_sc0001861.1_g000006 Rmu_sc0001899.1_g000008 Rmu_sc0002231.1_g000023 Rmu_sc0002393.1_g000012 Rmu_sc0002515.1_g000010 Rmu_sc0002551.1_g000013 Rmu_sc0002680.1_g000029 Rmu_sc0002700.1_g000030 Rmu_sc0002700.1_g000031 Rmu_sc0002709.1_g000035 Rmu_sc0002779.1_g000017 Rmu_sc0003267.1_g000040 Rmu_sc0003306.1_g000009 Rmu_sc0003338.1_g000014 Rmu_sc0003522.1_g000038 Rmu_sc0003522.1_g000039 Rmu_sc0003653.1_g000031 Rmu_sc0003901.1_g000003 Rmu_sc0003920.1_g000009 Rmu_sc0004014.1_g000009 Rmu_sc0004016.1_g000013 Rmu_sc0004031.1_g000002 Rmu_sc0004106.1_g000001 Rmu_sc0004432.1_g000004 Rmu_sc0004481.1_g000020 Rmu_sc0004874.1_g000005 Rmu_sc0004928.1_g000005 Rmu_sc0005065.1_g000053 Rmu_sc0005091.1_g000005 Rmu_sc0005217.1_g000015 Rmu_sc0005242.1_g000002 Rmu_sc0005300.1_g000011 Rmu_sc0005400.1_g000004 Rmu_sc0005486.1_g000007 Rmu_sc0005527.1_g000015 Rmu_sc0006059.1_g000021 Rmu_sc0006087.1_g000004 Rmu_sc0006184.1_g000006 Rmu_sc0006184.1_g000007 Rmu_sc0006578.1_g000006 Rmu_sc0006730.1_g000010 Rmu_sc0006736.1_g000030 Rmu_sc0006736.1_g000033 Rmu_sc0007333.1_g000018 Rmu_sc0007856.1_g000010 Rmu_sc0008231.1_g000003 Rmu_sc0009862.1_g000012 Rmu_sc0010547.1_g000001 Rmu_sc0010547.1_g000003 Rmu_sc0010632.1_g000012 Rmu_sc0010747.1_g000008 Rmu_sc0011075.1_g000009 Rmu_sc0011565.1_g000004 Rmu_sc0011641.1_g000003 Rmu_sc0013102.1_g000013 Rmu_sc0013160.1_g000006 Rmu_sc0014846.1_g000004 Rmu_sc0017037.1_g000003 Rmu_sc0018203.1_g000001 Rmu_sc0018204.1_g000001 Rmu_sc0018348.1_g000001 Rmu_sc0019354.1_g000002 Rmu_sc0021630.1_g000002 Rmu_sc0022987.1_g000002 Rmu_sc0024469.1_g000005 Rmu_sc0033519.1_g000001 Rmu_sc0033519.1_g000002 Rmu_sc0033519.1_g000003 Rmu_sc0042775.1_g000001 Rmu_ssc0000110.1_g000003 Rmu_ssc0000110.1_g000004 Rmu_ssc0000126.1_g000068 Rmu_ssc0000200.1_g000007 Rmu_ssc0000295.1_g000003 Rmu_ssc0000295.1_g000004 Rmu_ssc0000299.1_g000010 Rmu_ssc0000308.1_g000024 Rmu_ssc0000339.1_g000006 Rmu_ssc0000385.1_g000012 Rmu_ssc0000409.1_g000004 Rmu_ssc0000421.1_g000004
rosa_roxburghii Rroxscaffold_156G00440360 Rroxscaffold_166G00440800 Rroxscaffold_1G00039040 Rroxscaffold_1G00039050 Rroxscaffold_1G00073950 Rroxscaffold_2G00091710 Rroxscaffold_2G00120050 Rroxscaffold_2G00122590 Rroxscaffold_3G00219700 Rroxscaffold_3G00264140 Rroxscaffold_4G00290600 Rroxscaffold_4G00323610 Rroxscaffold_4G00328460 Rroxscaffold_5G00343440 Rroxscaffold_5G00343570 Rroxscaffold_5G00378540 Rroxscaffold_5G00385090 Rroxscaffold_7G00169130 Rroxscaffold_7G00216420
rosa_rugosa Rorug01G0065800 Rorug01G0073500 Rorug01G0091700 Rorug01G0096500 Rorug01G0204700.1 Rorug01G0249100 Rorug01G0333800 Rorug01G0333900 Rorug01G0339500 Rorug01G0431300 Rorug02G0085400 Rorug02G0117500 Rorug02G0130900 Rorug02G0178800 Rorug02G0226700 Rorug02G0336300 Rorug02G0338700 Rorug02G0351400 Rorug02G0459900 Rorug03G0187000 Rorug03G0223700 Rorug03G0291300 Rorug03G0291300 Rorug03G0311100 Rorug03G0316900 Rorug03G0346000 Rorug04G0014500 Rorug04G0014600 Rorug04G0124100 Rorug04G0136500 Rorug04G0302000 Rorug04G0338100 Rorug04G0338200 Rorug04G0413100 Rorug05G0182200 Rorug05G0226500 Rorug05G0273300 Rorug05G0292200 Rorug05G0292200 Rorug05G0392500 Rorug05G0394500 Rorug05G0394600 Rorug05G0505600.1 Rorug06G0351400 Rorug06G0393400 Rorug06G0393600 Rorug06G0470000 Rorug07G0063100 Rorug07G0086800 Rorug07G0109200 Rorug07G0236100
rosa_samantha Rh1AG010800 Rh1AG011100 Rh1AG064900 Rh1AG088000 Rh1AG207100 Rh1AG262000 Rh1AG300800 Rh1BG043000 Rh1BG144600 Rh1BG180700 Rh1BG180800 Rh1BG328800 Rh1BG399400 Rh1CG041400 Rh1CG047300 Rh1CG379700 Rh1DG036500 Rh1DG083000 Rh1DG210700 Rh1DG210800 Rh1DG231100 Rh2AG007900 Rh2AG055500 Rh2AG339100 Rh2AG368100 Rh2BG243300 Rh2BG258900 Rh2BG292000 Rh2BG333500 Rh2BG387300 Rh2BG612800 Rh2BG619100 Rh2CG026500 Rh2CG163600 Rh2CG535700 Rh2DG186400 Rh2DG235000 Rh2DG314500 Rh2DG388500 Rh2DG391400 Rh2DG496900 Rh2DG526700 Rh2DG570700 Rh3AG330700 Rh3BG266900 Rh3CG236000 Rh3CG340400 Rh3DG090000 Rh3DG278400 Rh3DG297600 Rh3DG362600 Rh4AG001300 Rh4AG023300 Rh4AG097100 Rh4AG427000 Rh4BG029400 Rh4BG032400 Rh4BG086000 Rh4BG249200 Rh4CG001900 Rh4CG040600 Rh4CG093000 Rh4CG106300 Rh4CG113200 Rh4CG113900 Rh4DG002300 Rh4DG144400 Rh4DG234200 Rh5AG043700 Rh5AG084900 Rh5AG161500 Rh5AG409000 Rh5AG457200 Rh5AG457900 Rh5AG473700 Rh5AG520600 Rh5BG042100 Rh5BG124100 Rh5BG323500 Rh5BG417200 Rh5BG443700 Rh5BG451500 Rh5BG464900 Rh5BG470400 Rh5BG522500 Rh5CG068800 Rh5CG178300 Rh5CG231000 Rh5CG258600 Rh5CG394500 Rh5CG473700 Rh5DG164700 Rh5DG235400 Rh5DG261300 Rh5DG304900 Rh5DG334500 Rh5DG424300 Rh5DG458400 Rh5DG478600 Rh5DG552300 Rh5DG552700 Rh6AG037000 Rh6AG042100 Rh6AG255500 Rh6AG283400 Rh6AG291800 Rh6BG049600 Rh6BG080700 Rh6BG114600 Rh6BG128900 Rh6BG352500 Rh6CG052400 Rh6CG112900 Rh6CG113000 Rh6CG131300 Rh6CG157700 Rh6CG243200 Rh6CG254100 Rh6CG275700 Rh6CG299700 Rh6CG309100 Rh6CG317600 Rh6CG342600 Rh6CG471900 Rh6DG038200 Rh6DG102300 Rh6DG114400 Rh6DG225900 Rh6DG292900 Rh6DG320700 Rh6DG512800 Rh7AG217700 Rh7AG313900 Rh7AG446000 Rh7AG472600 Rh7BG223100 Rh7BG349900 Rh7BG352000 Rh7CG160200 Rh7CG233900 Rh7CG242700 Rh7CG273900 Rh7CG306400 Rh7CG322200 Rh7DG053800 Rh7DG077800 Rh7DG227700 Rh7DG404800
rosa_wichuraiana Rw0G003990 Rw2G022110 Rw2G024890 Rw6G005700 Rw7G008770

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 1044
AccB1I GGYRCC 1 cut(s) 977
AccI GTMKAC 1 cut(s) 29
AccII CGCG 3 cut(s) 189, 817, 861
AciI CCGC 3 cut(s) 5, 41, 541
AclWI GGATC 7 cut(s) 222, 349, 464, 477, 518, 531, 1250
AcsI RAATTY 2 cut(s) 489, 1307
AdeI CACNNNGTG 1 cut(s) 977
AfaI GTAC 5 cut(s) 532, 858, 1056, 1074, 1185
AfeI AGCGCT 1 cut(s) 782
AfiI CCNNNNNNNGG 2 cut(s) 445, 1417
AflIII ACRYGT 1 cut(s) 919
AgsI TTSAA 7 cut(s) 224, 356, 517, 774, 917, 1088, 1207
AjiI CACGTC 1 cut(s) 1213
AjnI CCWGG 2 cut(s) 785, 1281
AjuI GAANNNNNNNTTGG 2 cut(s) 161, 193
AleI CACNNNNGTG 1 cut(s) 1316
AloI GAACNNNNNNTCC 2 cut(s) 440, 472
AluBI AGCT 3 cut(s) 393, 593, 1025
AluI AGCT 3 cut(s) 393, 593, 1025
AlwI GGATC 7 cut(s) 222, 349, 464, 477, 518, 531, 1250
Aor51HI AGCGCT 1 cut(s) 782
AoxI GGCC 1 cut(s) 766
ApeKI GCWGC 4 cut(s) 678, 707, 968, 1381
ApoI RAATTY 2 cut(s) 489, 1307
ArsI GACNNNNNNTTYG 2 cut(s) 440, 472
Asp700I GAANNNNTTC 1 cut(s) 144
AspLEI GCGC 4 cut(s) 271, 783, 1045, 1386
AspS9I GGNCC 2 cut(s) 436, 766
AsuC2I CCSGG 3 cut(s) 599, 975, 1191
AsuHPI GGTGA 3 cut(s) 54, 641, 1316
AsuII TTCGAA 2 cut(s) 127, 486
AvaII GGWCC 1 cut(s) 436
BaeGI GKGCMC 2 cut(s) 669, 982
BamHI GGATCC 2 cut(s) 469, 523
BanI GGYRCC 1 cut(s) 977
BanII GRGCYC 1 cut(s) 1408
BarI GAAGNNNNNNTAC 2 cut(s) 1156, 1188
BbsI GAAGAC 1 cut(s) 344
BbvI GCAGC 4 cut(s) 690, 694, 955, 1393
BccI CCATC 7 cut(s) 151, 159, 409, 841, 952, 1210, 1234
BceAI ACGGC 1 cut(s) 753
BcgI CGANNNNNNTGC 4 cut(s) 476, 510, 795, 829
BciT130I CCWGG 2 cut(s) 787, 1283
BcnI CCSGG 3 cut(s) 599, 975, 1191
BfaI CTAG 7 cut(s) 561, 618, 890, 998, 1076, 1127, 1200
BfmI CTRYAG 1 cut(s) 409
BfoI RGCGCY 1 cut(s) 784
BglII AGATCT 1 cut(s) 879
BisI GCNGC 5 cut(s) 42, 679, 708, 969, 1382
BlsI GCNGC 5 cut(s) 43, 680, 709, 970, 1383
Bme1390I CCNGG 5 cut(s) 599, 787, 975, 1191, 1283
Bme18I GGWCC 1 cut(s) 436
BmgBI CACGTC 1 cut(s) 1213
BmgT120I GGNCC 2 cut(s) 436, 766
BmiI GGNNCC 9 cut(s) 141, 437, 471, 525, 767, 979, 1032, 1224, 1423
BmrFI CCNGG 5 cut(s) 599, 787, 975, 1191, 1283
BmrI ACTGGG 1 cut(s) 369
BmsI GCATC 5 cut(s) 354, 719, 838, 1096, 1368
BmuI ACTGGG 1 cut(s) 369
BoxI GACNNNNGTC 1 cut(s) 12
BpiI GAAGAC 1 cut(s) 344
BplI GAGNNNNNCTC 2 cut(s) 1171, 1203
BpmI CTGGAG 1 cut(s) 769
Bpu10I CCTNAGC 1 cut(s) 368
Bpu14I TTCGAA 2 cut(s) 127, 486
BpuMI CCSGG 3 cut(s) 599, 975, 1191
BsaJI CCNNGG 5 cut(s) 249, 597, 729, 1050, 1190
BsaWI WCCGGW 1 cut(s) 211
Bsc4I CCNNNNNNNGG 2 cut(s) 445, 1417
Bse1I ACTGG 3 cut(s) 364, 957, 1034
BseBI CCWGG 2 cut(s) 787, 1283
BseDI CCNNGG 5 cut(s) 249, 597, 729, 1050, 1190
BseGI GGATG 6 cut(s) 162, 245, 369, 829, 1066, 1294
BseLI CCNNNNNNNGG 2 cut(s) 445, 1417
BseMII CTCAG 5 cut(s) 126, 382, 622, 945, 1167
BseNI ACTGG 3 cut(s) 364, 957, 1034
BseRI GAGGAG 5 cut(s) 119, 122, 749, 1159, 1235
BseSI GKGCMC 2 cut(s) 669, 982
BseXI GCAGC 4 cut(s) 690, 694, 955, 1393
BsgI GTGCAG 4 cut(s) 822, 896, 933, 954
Bsh1236I CGCG 3 cut(s) 189, 817, 861
Bsh1285I CGRYCG 1 cut(s) 865
BshFI GGCC 1 cut(s) 768
BshNI GGYRCC 1 cut(s) 977
BsiEI CGRYCG 1 cut(s) 865
BsiSI CCGG 4 cut(s) 212, 599, 975, 1190
BslFI GGGAC 1 cut(s) 461
BslI CCNNNNNNNGG 2 cut(s) 445, 1417
BsmFI GGGAC 1 cut(s) 461
BsmI GAATGC 1 cut(s) 1138
BsnI GGCC 1 cut(s) 768
Bsp119I TTCGAA 2 cut(s) 127, 486
Bsp1286I GDGCHC 3 cut(s) 669, 982, 1408
BspACI CCGC 3 cut(s) 5, 41, 541
BspANI GGCC 1 cut(s) 768
BspCNI CTCAG 5 cut(s) 127, 381, 621, 944, 1168
BspFNI CGCG 3 cut(s) 189, 817, 861
BspLI GGNNCC 9 cut(s) 141, 437, 471, 525, 767, 979, 1032, 1224, 1423
BspPI GGATC 7 cut(s) 222, 349, 464, 477, 518, 531, 1250
BspQI GCTCTTC 1 cut(s) 1123
BspT104I TTCGAA 2 cut(s) 127, 486
BspT107I GGYRCC 1 cut(s) 977
BsrI ACTGG 3 cut(s) 364, 957, 1034
BssECI CCNNGG 5 cut(s) 249, 597, 729, 1050, 1190
BssT1I CCWWGG 2 cut(s) 249, 729
Bst2UI CCWGG 2 cut(s) 787, 1283
Bst4CI ACNGT 7 cut(s) 196, 265, 547, 555, 757, 874, 1054
Bst6I CTCTTC 2 cut(s) 1123, 1177
BstAPI GCANNNNNTGC 1 cut(s) 977
BstBI TTCGAA 2 cut(s) 127, 486
BstC8I GCNNGC 6 cut(s) 499, 509, 591, 747, 1011, 1023
BstDEI CTNAG 5 cut(s) 135, 368, 608, 931, 1176
BstDSI CCRYGG 1 cut(s) 1050
BstENI CCTNNNNNAGG 1 cut(s) 1415
BstF5I GGATG 6 cut(s) 162, 245, 369, 829, 1066, 1294
BstFNI CGCG 3 cut(s) 189, 817, 861
BstH2I RGCGCY 1 cut(s) 784
BstHHI GCGC 4 cut(s) 271, 783, 1045, 1386
BstMCI CGRYCG 1 cut(s) 865
BstMWI GCNNNNNNNGC 3 cut(s) 977, 998, 1348
BstNI CCWGG 2 cut(s) 787, 1283
BstNSI RCATGY 3 cut(s) 511, 923, 1013
BstPAI GACNNNNGTC 1 cut(s) 12
BstSCI CCNGG 5 cut(s) 597, 785, 973, 1189, 1281
BstSFI CTRYAG 1 cut(s) 409
BstSLI GKGCMC 2 cut(s) 669, 982
BstUI CGCG 3 cut(s) 189, 817, 861
BstV1I GCAGC 4 cut(s) 690, 694, 955, 1393
BstV2I GAAGAC 1 cut(s) 344
BstX2I RGATCY 4 cut(s) 214, 469, 523, 879
BstXI CCANNNNNNTGG 1 cut(s) 908
BstYI RGATCY 4 cut(s) 214, 469, 523, 879
BsuRI GGCC 1 cut(s) 768
BtgI CCRYGG 1 cut(s) 1050
BtrI CACGTC 1 cut(s) 1213
BtsCI GGATG 6 cut(s) 162, 245, 369, 829, 1066, 1294
BtsI GCAGTG 1 cut(s) 722
BtsIMutI CAGTG 5 cut(s) 543, 722, 870, 950, 1041
Cac8I GCNNGC 6 cut(s) 499, 509, 591, 747, 1011, 1023
CfoI GCGC 4 cut(s) 271, 783, 1045, 1386
Cfr13I GGNCC 2 cut(s) 436, 766
CseI GACGC 2 cut(s) 17, 1073
Csp6I GTAC 5 cut(s) 531, 857, 1055, 1073, 1184
CviAII CATG 6 cut(s) 292, 508, 671, 902, 920, 1010
CviQI GTAC 5 cut(s) 531, 857, 1055, 1073, 1184
DdeI CTNAG 5 cut(s) 135, 368, 608, 931, 1176
DraI TTTAAA 1 cut(s) 304
DraIII CACNNNGTG 1 cut(s) 977
Eam1104I CTCTTC 2 cut(s) 1123, 1177
EarI CTCTTC 2 cut(s) 1123, 1177
EciI GGCGGA 1 cut(s) 20
Eco130I CCWWGG 2 cut(s) 249, 729
Eco24I GRGCYC 1 cut(s) 1408
Eco47I GGWCC 1 cut(s) 436
Eco47III AGCGCT 1 cut(s) 782
EcoNI CCTNNNNNAGG 1 cut(s) 1415
EcoRI GAATTC 1 cut(s) 1307
EcoRII CCWGG 2 cut(s) 785, 1281
EcoT14I CCWWGG 2 cut(s) 249, 729
EcoT22I ATGCAT 1 cut(s) 1011
EcoT38I GRGCYC 1 cut(s) 1408
ErhI CCWWGG 2 cut(s) 249, 729
FaeI CATG 6 cut(s) 295, 511, 674, 905, 923, 1013
FaqI GGGAC 1 cut(s) 461
FatI CATG 6 cut(s) 291, 507, 670, 901, 919, 1009
FauNDI CATATG 1 cut(s) 1252
FblI GTMKAC 1 cut(s) 29
Fnu4HI GCNGC 5 cut(s) 42, 679, 708, 969, 1382
FokI GGATG 6 cut(s) 169, 232, 376, 816, 1073, 1301
FriOI GRGCYC 1 cut(s) 1408
Fsp4HI GCNGC 5 cut(s) 42, 679, 708, 969, 1382
FspBI CTAG 7 cut(s) 561, 618, 890, 998, 1076, 1127, 1200
FspI TGCGCA 1 cut(s) 1044
GlaI GCGC 4 cut(s) 270, 782, 1044, 1385
GluI GCNGC 5 cut(s) 42, 679, 708, 969, 1382
GsuI CTGGAG 1 cut(s) 769
HaeII RGCGCY 1 cut(s) 784
HaeIII GGCC 1 cut(s) 768
HapII CCGG 4 cut(s) 212, 599, 975, 1190
HgaI GACGC 2 cut(s) 17, 1073
HhaI GCGC 4 cut(s) 271, 783, 1045, 1386
Hin1II CATG 6 cut(s) 295, 511, 674, 905, 923, 1013
Hin6I GCGC 4 cut(s) 269, 781, 1043, 1384
HinP1I GCGC 4 cut(s) 269, 781, 1043, 1384
HinfI GANTC 5 cut(s) 129, 564, 612, 659, 929
HpaII CCGG 4 cut(s) 212, 599, 975, 1190
HphI GGTGA 3 cut(s) 54, 641, 1316
Hpy166II GTNNAC 2 cut(s) 30, 1184
Hpy188I TCNGA 9 cut(s) 55, 136, 206, 440, 611, 867, 934, 1144, 1177
Hpy188III TCNNGA 1 cut(s) 1264
Hpy8I GTNNAC 2 cut(s) 30, 1184
Hpy99I CGWCG 1 cut(s) 153
HpyAV CCTTC 6 cut(s) 804, 819, 841, 948, 1092, 1295
HpyCH4III ACNGT 7 cut(s) 196, 265, 547, 555, 757, 874, 1054
HpyCH4IV ACGT 3 cut(s) 349, 963, 1212
HpyCH4V TGCA 9 cut(s) 322, 678, 710, 839, 877, 950, 971, 1009, 1381
HpyF10VI GCNNNNNNNGC 3 cut(s) 977, 998, 1348
HpyF3I CTNAG 5 cut(s) 135, 368, 608, 931, 1176
HpySE526I ACGT 3 cut(s) 349, 963, 1212
Hsp92II CATG 6 cut(s) 295, 511, 674, 905, 923, 1013
HspAI GCGC 4 cut(s) 269, 781, 1043, 1384
LguI GCTCTTC 1 cut(s) 1123
LmnI GCTCC 7 cut(s) 300, 598, 788, 1030, 1222, 1241, 1421
Lsp1109I GCAGC 4 cut(s) 690, 694, 955, 1393
LweI GCATC 5 cut(s) 354, 719, 838, 1096, 1368
MaeI CTAG 7 cut(s) 561, 618, 890, 998, 1076, 1127, 1200
MaeII ACGT 3 cut(s) 349, 963, 1212
MaeIII GTNAC 3 cut(s) 190, 1163, 1393
MboII GAAGA 5 cut(s) 266, 344, 1110, 1164, 1310
MfeI CAATTG 1 cut(s) 1083
MflI RGATCY 4 cut(s) 214, 469, 523, 879
MhlI GDGCHC 3 cut(s) 669, 982, 1408
MluCI AATT 6 cut(s) 18, 299, 489, 518, 1083, 1307
MlyI GAGTC 3 cut(s) 573, 668, 923
MmeI TCCRAC 4 cut(s) 529, 636, 1177, 1263
Mph1103I ATGCAT 1 cut(s) 1011
MroXI GAANNNNTTC 1 cut(s) 144
MseI TTAA 4 cut(s) 231, 303, 1344, 1441
MslI CAYNNNNRTG 4 cut(s) 506, 906, 1231, 1316
MspA1I CMGCKG 1 cut(s) 1025
MspI CCGG 4 cut(s) 212, 599, 975, 1190
MspR9I CCNGG 5 cut(s) 599, 787, 975, 1191, 1283
MunI CAATTG 1 cut(s) 1083
Mva1269I GAATGC 1 cut(s) 1138
MvaI CCWGG 2 cut(s) 787, 1283
MvnI CGCG 3 cut(s) 189, 817, 861
MwoI GCNNNNNNNGC 3 cut(s) 977, 998, 1348
NciI CCSGG 3 cut(s) 599, 975, 1191
NdeI CATATG 1 cut(s) 1252
NlaIII CATG 6 cut(s) 295, 511, 674, 905, 923, 1013
NlaIV GGNNCC 9 cut(s) 141, 437, 471, 525, 767, 979, 1032, 1224, 1423
NmeAIII GCCGAG 1 cut(s) 414
NsbI TGCGCA 1 cut(s) 1044
NsiI ATGCAT 1 cut(s) 1011
NspI RCATGY 3 cut(s) 511, 923, 1013
NspV TTCGAA 2 cut(s) 127, 486
OliI CACNNNNGTG 1 cut(s) 1316
PaeI GCATGC 2 cut(s) 511, 1013
PciI ACATGT 1 cut(s) 919
PciSI GCTCTTC 1 cut(s) 1123
PctI GAATGC 1 cut(s) 1138
PdmI GAANNNNTTC 1 cut(s) 144
PfeI GAWTC 2 cut(s) 129, 612
PfoI TCCNGGA 1 cut(s) 1281
PkrI GCNGC 5 cut(s) 43, 680, 709, 970, 1383
Ple19I CGATCG 1 cut(s) 865
PleI GAGTC 3 cut(s) 572, 667, 923
PpsI GAGTC 3 cut(s) 572, 667, 923
PscI ACATGT 1 cut(s) 919
PshAI GACNNNNGTC 1 cut(s) 12
Psp6I CCWGG 2 cut(s) 785, 1281
PspGI CCWGG 2 cut(s) 785, 1281
PspN4I GGNNCC 9 cut(s) 141, 437, 471, 525, 767, 979, 1032, 1224, 1423
PspPI GGNCC 2 cut(s) 436, 766
PsuI RGATCY 4 cut(s) 214, 469, 523, 879
PvuI CGATCG 1 cut(s) 865
PvuII CAGCTG 1 cut(s) 1025
RsaI GTAC 5 cut(s) 532, 858, 1056, 1074, 1185
RsaNI GTAC 5 cut(s) 531, 857, 1055, 1073, 1184
RseI CAYNNNNRTG 4 cut(s) 506, 906, 1231, 1316
SapI GCTCTTC 1 cut(s) 1123
SaqAI TTAA 4 cut(s) 231, 303, 1344, 1441
SatI GCNGC 5 cut(s) 42, 679, 708, 969, 1382
Sau96I GGNCC 2 cut(s) 436, 766
SchI GAGTC 3 cut(s) 573, 668, 923
ScrFI CCNGG 5 cut(s) 599, 787, 975, 1191, 1283
SduI GDGCHC 3 cut(s) 669, 982, 1408
SfaNI GCATC 5 cut(s) 354, 719, 838, 1096, 1368
SfcI CTRYAG 1 cut(s) 409
SfuI TTCGAA 2 cut(s) 127, 486
SinI GGWCC 1 cut(s) 436
SmiMI CAYNNNNRTG 4 cut(s) 506, 906, 1231, 1316
SphI GCATGC 2 cut(s) 511, 1013
Sse9I AATT 6 cut(s) 18, 299, 489, 518, 1083, 1307
SsiI CCGC 3 cut(s) 5, 41, 541
SspMI CTAG 7 cut(s) 561, 618, 890, 998, 1076, 1127, 1200
StyD4I CCNGG 5 cut(s) 597, 785, 973, 1189, 1281
StyI CCWWGG 2 cut(s) 249, 729
TaaI ACNGT 7 cut(s) 196, 265, 547, 555, 757, 874, 1054
TaiI ACGT 3 cut(s) 352, 966, 1215
TaqI TCGA 5 cut(s) 127, 151, 404, 486, 1272
TasI AATT 6 cut(s) 18, 299, 489, 518, 1083, 1307
TatI WGTACW 1 cut(s) 1072
TauI GCSGC 1 cut(s) 44
TfiI GAWTC 2 cut(s) 129, 612
Tru1I TTAA 4 cut(s) 231, 303, 1344, 1441
Tru9I TTAA 4 cut(s) 231, 303, 1344, 1441
TscAI CASTG 5 cut(s) 550, 729, 877, 957, 1041
TseI GCWGC 4 cut(s) 678, 707, 968, 1381
TspDTI ATGAA 1 cut(s) 280
TspGWI ACGGA 2 cut(s) 652, 974
TspRI CASTG 5 cut(s) 550, 729, 877, 957, 1041
VpaK11BI GGWCC 1 cut(s) 436
XagI CCTNNNNNAGG 1 cut(s) 1415
XapI RAATTY 2 cut(s) 489, 1307
XceI RCATGY 3 cut(s) 511, 923, 1013
XmiI GTMKAC 1 cut(s) 29
XmnI GAANNNNTTC 1 cut(s) 144
XspI CTAG 7 cut(s) 561, 618, 890, 998, 1076, 1127, 1200
Zsp2I ATGCAT 1 cut(s) 1011
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.