Rmu_ssc0000200.1_g000007

acid phosphatase activity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_ssc0000200.1
OG0000044
Physical Location & Seq
Forward (+)
36205 .. 40807
4603 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_ssc0000200.1_g000007.1.cds

Sequence Viewer

Length: 1785 bp
atggtagctggggctgggggtggaggccggatggcagagaggggagagagtggagaccggatggcagcaaggggtggaggctatataagattctttccagcgtgggttggatcggtgcaagacaatcctcgttgggaaactcctttcgccaccgaatgtgtgatgcctaaggcacttgagttagcgaagaggctacgtctgttctggaataacgttcctaattggatggttgcccccttaggcaagggtttcttcttgcaccaattccagactcttgatgatatgcagcgcatttggtcatcgggctctggtttgcctactgggatcaccagacactttttgaaattgcacgaggagttggttgatgaggctgaaatagcttcacaatttaaccctgcaaaatgtttctatgcaagagttttggttgctgtcgatctttcaaaatctctctgtgaacaagttagggttgtgcgcacacatggagaatcggtgattgccacggttgactatgagtcagtcccagtgatttgtcaagcctgtggcattgttggtcatcctgtcaacaagtgtaagaacaggacgaagccaccaggctgtgatcaaagtggtgaagcttctgaactgccatccagcagaaatcagtgcacataccagctagatggtgatccggtggtagctgggcgcgggcgcttccgatcatggaggaaccgtcgtacacgtcgacgctcccggccggtaactgtgctgccagaaaaggaccttgtggcggatgcaagcttacccccacctccttctgctggccaaccaactgctatcacacatgaaaatgtaattgttctaaccgtccaaaatctaccagaacaactagtgcctactagcttccaggatgttgctgtgcggcatacagtggagccagttttggctgacgttggagagacctcctcctcctccactgcttctgtacccccgggtgtggacattgaggtcacttcaacaggggcttttgatgtctctgacctggacgttgaaactgaaaacttggtcagtggtacactagaggatggcgagttcatccctgttaggtccaagaattccatgaagctgcctaaacctttagttaaaactaaaggtatggcaagtgttgacacgcagcgagcattaaccaacatggtcctacatgtgactgctaaacaaatcacggtatcctgttcattcgactgtgtgcatggcatatatacatgcgtctatgccaaaaccactattgctgggcgtagactcctctggttggacttgcgttatgtaagagcgaactgggttcttgggccttggttgttttttggtgatttcaattgtgtttttagtgctcatgaaaaatggggaggaaacacaccctctgcaagatcctacctggacttccaacaaatgtgcaattcttgtgctttgcttgacattcccactaagggattggcctttacgtggactaatcgtcgcactgaggttcgattggatagagcccttggtaacttagaatggattgattcttgggcggttatggagtgttgcaccctcactagagccacatctgaccattgccctattctcttgacttgttcgaaattcatgaatgtcattaagtctacattccgattccaaagttgctggcttaaacaaccaaaatttctgtcattggttagagatttttgggacatgctgcaattttttgggtgccctcagtttgtcttggcttccaagctaagggcgttgaaggtgatgcttaagtcctag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RVT_1 RVT_3

Protein Analysis

594

Amino Acids

66.05

Weight (kDa)

8.68

Isoelectric Point (pI)

43.35

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000044)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G07760 AT5G28823
fragaria_vesca FvH4_1g13572 FvH4_2g03281 FvH4_2g04691 FvH4_2g08332 FvH4_2g08333 FvH4_2g15313 FvH4_2g26101 FvH4_2g29541 FvH4_3g06911 FvH4_3g34351 FvH4_3g43733 FvH4_4g02432 FvH4_4g05601 FvH4_4g08213 FvH4_4g09961 FvH4_4g10131 FvH4_4g20001 FvH4_4g20002 FvH4_5g01051 FvH4_5g01401 FvH4_5g27943 FvH4_6g09220 FvH4_6g17383 FvH4_6g35491 FvH4_6g46421 FvH4_7g04151 FvH4_7g13962 FvH4_7g18611 FvH4_7g19491 FvH4_7g19511 FvH4_7g26562
malus_domestica MD06G1221600.v1.1
pyrus_communis pycom10g21150
rosa_chinensis RchiOBHm_Chr1g0337571 RchiOBHm_Chr2g0168771 RchiOBHm_Chr3g0453631 RchiOBHm_Chr6g0278581
rosa_laevigata RLG00000001899 RLG00000001925 RLG00000002026 RLG00000003410 RLG00000003767 RLG00000004304 RLG00000004473 RLG00000004677 RLG00000006856 RLG00000007994 RLG00000009888 RLG00000011627 RLG00000012174 RLG00000012217 RLG00000013118 RLG00000013736 RLG00000014194 RLG00000014251 RLG00000015011 RLG00000015057 RLG00000015235 RLG00000017416 RLG00000018052 RLG00000018537 RLG00000019968 RLG00000020096 RLG00000020263 RLG00000022606 RLG00000023119 RLG00000028111 RLG00000029686 RLG00000030126 RLG00000031124 RLG00000031236 RLG00000032766 RLG00000033171 RLG00000033548 RLG00000033987 RLG00000034062 RLG00000035115 RLG00000035863
rosa_multiflora Rmu_co8036712.1_g000001 Rmu_co8080248.1_g000001 Rmu_co8208334.1_g000001 Rmu_co8253451.1_g000001 Rmu_co8393241.1_g000001 Rmu_co8522225.1_g000005 Rmu_sc0000060.1_g000030 Rmu_sc0000060.1_g000031 Rmu_sc0000060.1_g000032 Rmu_sc0000090.1_g000008 Rmu_sc0000149.1_g000051 Rmu_sc0000149.1_g000058 Rmu_sc0000309.1_g000050 Rmu_sc0000370.1_g000022 Rmu_sc0000370.1_g000023 Rmu_sc0000370.1_g000024 Rmu_sc0000418.1_g000018 Rmu_sc0000427.1_g000014 Rmu_sc0000427.1_g000015 Rmu_sc0000434.1_g000008 Rmu_sc0000487.1_g000038 Rmu_sc0000487.1_g000039 Rmu_sc0000569.1_g000029 Rmu_sc0000580.1_g000097 Rmu_sc0000595.1_g000068 Rmu_sc0000607.1_g000027 Rmu_sc0000738.1_g000004 Rmu_sc0000758.1_g000001 Rmu_sc0000758.1_g000002 Rmu_sc0000870.1_g000019 Rmu_sc0000924.1_g000040 Rmu_sc0000924.1_g000041 Rmu_sc0000999.1_g000037 Rmu_sc0001001.1_g000001 Rmu_sc0001010.1_g000080 Rmu_sc0001075.1_g000041 Rmu_sc0001097.1_g000016 Rmu_sc0001173.1_g000020 Rmu_sc0001258.1_g000010 Rmu_sc0001425.1_g000031 Rmu_sc0001493.1_g000020 Rmu_sc0001493.1_g000021 Rmu_sc0001644.1_g000024 Rmu_sc0001648.1_g000039 Rmu_sc0001662.1_g000002 Rmu_sc0001849.1_g000046 Rmu_sc0001851.1_g000038 Rmu_sc0001861.1_g000006 Rmu_sc0001899.1_g000008 Rmu_sc0002231.1_g000023 Rmu_sc0002393.1_g000012 Rmu_sc0002515.1_g000010 Rmu_sc0002551.1_g000013 Rmu_sc0002680.1_g000029 Rmu_sc0002700.1_g000030 Rmu_sc0002700.1_g000031 Rmu_sc0002709.1_g000035 Rmu_sc0002779.1_g000017 Rmu_sc0003267.1_g000040 Rmu_sc0003306.1_g000009 Rmu_sc0003338.1_g000014 Rmu_sc0003522.1_g000038 Rmu_sc0003522.1_g000039 Rmu_sc0003653.1_g000031 Rmu_sc0003901.1_g000003 Rmu_sc0003920.1_g000009 Rmu_sc0004014.1_g000009 Rmu_sc0004016.1_g000013 Rmu_sc0004031.1_g000002 Rmu_sc0004106.1_g000001 Rmu_sc0004432.1_g000004 Rmu_sc0004481.1_g000020 Rmu_sc0004874.1_g000005 Rmu_sc0004928.1_g000005 Rmu_sc0005065.1_g000053 Rmu_sc0005091.1_g000005 Rmu_sc0005217.1_g000015 Rmu_sc0005242.1_g000002 Rmu_sc0005300.1_g000011 Rmu_sc0005400.1_g000004 Rmu_sc0005486.1_g000007 Rmu_sc0005527.1_g000015 Rmu_sc0006059.1_g000021 Rmu_sc0006087.1_g000004 Rmu_sc0006184.1_g000006 Rmu_sc0006184.1_g000007 Rmu_sc0006578.1_g000006 Rmu_sc0006730.1_g000010 Rmu_sc0006736.1_g000030 Rmu_sc0006736.1_g000033 Rmu_sc0007333.1_g000018 Rmu_sc0007856.1_g000010 Rmu_sc0008231.1_g000003 Rmu_sc0009862.1_g000012 Rmu_sc0010547.1_g000001 Rmu_sc0010547.1_g000003 Rmu_sc0010632.1_g000012 Rmu_sc0010747.1_g000008 Rmu_sc0011075.1_g000009 Rmu_sc0011565.1_g000004 Rmu_sc0011641.1_g000003 Rmu_sc0013102.1_g000013 Rmu_sc0013160.1_g000006 Rmu_sc0014846.1_g000004 Rmu_sc0017037.1_g000003 Rmu_sc0018203.1_g000001 Rmu_sc0018204.1_g000001 Rmu_sc0018348.1_g000001 Rmu_sc0019354.1_g000002 Rmu_sc0021630.1_g000002 Rmu_sc0022987.1_g000002 Rmu_sc0024469.1_g000005 Rmu_sc0033519.1_g000001 Rmu_sc0033519.1_g000002 Rmu_sc0033519.1_g000003 Rmu_sc0042775.1_g000001 Rmu_ssc0000110.1_g000003 Rmu_ssc0000110.1_g000004 Rmu_ssc0000126.1_g000068 Rmu_ssc0000200.1_g000007 Rmu_ssc0000295.1_g000003 Rmu_ssc0000295.1_g000004 Rmu_ssc0000299.1_g000010 Rmu_ssc0000308.1_g000024 Rmu_ssc0000339.1_g000006 Rmu_ssc0000385.1_g000012 Rmu_ssc0000409.1_g000004 Rmu_ssc0000421.1_g000004
rosa_roxburghii Rroxscaffold_156G00440360 Rroxscaffold_166G00440800 Rroxscaffold_1G00039040 Rroxscaffold_1G00039050 Rroxscaffold_1G00073950 Rroxscaffold_2G00091710 Rroxscaffold_2G00120050 Rroxscaffold_2G00122590 Rroxscaffold_3G00219700 Rroxscaffold_3G00264140 Rroxscaffold_4G00290600 Rroxscaffold_4G00323610 Rroxscaffold_4G00328460 Rroxscaffold_5G00343440 Rroxscaffold_5G00343570 Rroxscaffold_5G00378540 Rroxscaffold_5G00385090 Rroxscaffold_7G00169130 Rroxscaffold_7G00216420
rosa_rugosa Rorug01G0065800 Rorug01G0073500 Rorug01G0091700 Rorug01G0096500 Rorug01G0204700.1 Rorug01G0249100 Rorug01G0333800 Rorug01G0333900 Rorug01G0339500 Rorug01G0431300 Rorug02G0085400 Rorug02G0117500 Rorug02G0130900 Rorug02G0178800 Rorug02G0226700 Rorug02G0336300 Rorug02G0338700 Rorug02G0351400 Rorug02G0459900 Rorug03G0187000 Rorug03G0223700 Rorug03G0291300 Rorug03G0291300 Rorug03G0311100 Rorug03G0316900 Rorug03G0346000 Rorug04G0014500 Rorug04G0014600 Rorug04G0124100 Rorug04G0136500 Rorug04G0302000 Rorug04G0338100 Rorug04G0338200 Rorug04G0413100 Rorug05G0182200 Rorug05G0226500 Rorug05G0273300 Rorug05G0292200 Rorug05G0292200 Rorug05G0392500 Rorug05G0394500 Rorug05G0394600 Rorug05G0505600.1 Rorug06G0351400 Rorug06G0393400 Rorug06G0393600 Rorug06G0470000 Rorug07G0063100 Rorug07G0086800 Rorug07G0109200 Rorug07G0236100
rosa_samantha Rh1AG010800 Rh1AG011100 Rh1AG064900 Rh1AG088000 Rh1AG207100 Rh1AG262000 Rh1AG300800 Rh1BG043000 Rh1BG144600 Rh1BG180700 Rh1BG180800 Rh1BG328800 Rh1BG399400 Rh1CG041400 Rh1CG047300 Rh1CG379700 Rh1DG036500 Rh1DG083000 Rh1DG210700 Rh1DG210800 Rh1DG231100 Rh2AG007900 Rh2AG055500 Rh2AG339100 Rh2AG368100 Rh2BG243300 Rh2BG258900 Rh2BG292000 Rh2BG333500 Rh2BG387300 Rh2BG612800 Rh2BG619100 Rh2CG026500 Rh2CG163600 Rh2CG535700 Rh2DG186400 Rh2DG235000 Rh2DG314500 Rh2DG388500 Rh2DG391400 Rh2DG496900 Rh2DG526700 Rh2DG570700 Rh3AG330700 Rh3BG266900 Rh3CG236000 Rh3CG340400 Rh3DG090000 Rh3DG278400 Rh3DG297600 Rh3DG362600 Rh4AG001300 Rh4AG023300 Rh4AG097100 Rh4AG427000 Rh4BG029400 Rh4BG032400 Rh4BG086000 Rh4BG249200 Rh4CG001900 Rh4CG040600 Rh4CG093000 Rh4CG106300 Rh4CG113200 Rh4CG113900 Rh4DG002300 Rh4DG144400 Rh4DG234200 Rh5AG043700 Rh5AG084900 Rh5AG161500 Rh5AG409000 Rh5AG457200 Rh5AG457900 Rh5AG473700 Rh5AG520600 Rh5BG042100 Rh5BG124100 Rh5BG323500 Rh5BG417200 Rh5BG443700 Rh5BG451500 Rh5BG464900 Rh5BG470400 Rh5BG522500 Rh5CG068800 Rh5CG178300 Rh5CG231000 Rh5CG258600 Rh5CG394500 Rh5CG473700 Rh5DG164700 Rh5DG235400 Rh5DG261300 Rh5DG304900 Rh5DG334500 Rh5DG424300 Rh5DG458400 Rh5DG478600 Rh5DG552300 Rh5DG552700 Rh6AG037000 Rh6AG042100 Rh6AG255500 Rh6AG283400 Rh6AG291800 Rh6BG049600 Rh6BG080700 Rh6BG114600 Rh6BG128900 Rh6BG352500 Rh6CG052400 Rh6CG112900 Rh6CG113000 Rh6CG131300 Rh6CG157700 Rh6CG243200 Rh6CG254100 Rh6CG275700 Rh6CG299700 Rh6CG309100 Rh6CG317600 Rh6CG342600 Rh6CG471900 Rh6DG038200 Rh6DG102300 Rh6DG114400 Rh6DG225900 Rh6DG292900 Rh6DG320700 Rh6DG512800 Rh7AG217700 Rh7AG313900 Rh7AG446000 Rh7AG472600 Rh7BG223100 Rh7BG349900 Rh7BG352000 Rh7CG160200 Rh7CG233900 Rh7CG242700 Rh7CG273900 Rh7CG306400 Rh7CG322200 Rh7DG053800 Rh7DG077800 Rh7DG227700 Rh7DG404800
rosa_wichuraiana Rw0G003990 Rw2G022110 Rw2G024890 Rw6G005700 Rw7G008770

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 983
Acc16I TGCGCA 1 cut(s) 473
AccB1I GGYRCC 1 cut(s) 1725
AccI GTMKAC 3 cut(s) 721, 1273, 1637
AccII CGCG 1 cut(s) 684
AciI CCGC 4 cut(s) 684, 767, 898, 1547
AclI AACGTT 1 cut(s) 213
AclWI GGATC 4 cut(s) 118, 332, 659, 1395
AcoI YGGCCR 2 cut(s) 731, 799
AcsI RAATTY 3 cut(s) 1090, 1616, 1676
AfaI GTAC 3 cut(s) 715, 963, 1051
AfiI CCNNNNNNNGG 7 cut(s) 766, 797, 973, 1285, 1460, 1476, 1755
AflII CTTAAG 1 cut(s) 1775
AflIII ACRYGT 2 cut(s) 716, 1177
AgsI TTSAA 6 cut(s) 343, 441, 993, 1028, 1348, 1765
AhdI GACNNNNNGTC 2 cut(s) 511, 1485
AhlI ACTAGT 1 cut(s) 865
AjiI CACGTC 1 cut(s) 719
AjnI CCWGG 4 cut(s) 589, 882, 1017, 1407
AloI GAACNNNNNNTCC 2 cut(s) 1052, 1084
AluBI AGCT 9 cut(s) 8, 380, 614, 655, 677, 777, 879, 1102, 1753
AluI AGCT 9 cut(s) 8, 380, 614, 655, 677, 777, 879, 1102, 1753
Alw21I GWGCWC 2 cut(s) 647, 1366
Alw26I GTCTC 3 cut(s) 48, 929, 1015
Alw44I GTGCAC 1 cut(s) 643
AlwI GGATC 4 cut(s) 118, 332, 659, 1395
Ama87I CYCGRG 1 cut(s) 967
AoxI GGCC 5 cut(s) 25, 731, 799, 1322, 1467
ApaLI GTGCAC 1 cut(s) 643
ApeKI GCWGC 6 cut(s) 65, 286, 745, 1102, 1150, 1711
ApoI RAATTY 3 cut(s) 1090, 1616, 1676
ArsI GACNNNNNNTTYG 2 cut(s) 1667, 1699
AspLEI GCGC 4 cut(s) 291, 474, 684, 690
AspS9I GGNCC 4 cut(s) 757, 1083, 1171, 1322
AsuC2I CCSGG 3 cut(s) 730, 968, 969
AsuHPI GGTGA 6 cut(s) 319, 502, 620, 674, 1352, 1780
AsuII TTCGAA 1 cut(s) 1613
AvaI CYCGRG 1 cut(s) 967
AvaII GGWCC 3 cut(s) 757, 1083, 1171
AxyI CCTNAGG 2 cut(s) 168, 238
BaeGI GKGCMC 2 cut(s) 647, 1730
BalI TGGCCA 1 cut(s) 801
BanI GGYRCC 1 cut(s) 1725
BanII GRGCYC 2 cut(s) 308, 1516
BauI CACGAG 1 cut(s) 350
Bbv12I GWGCWC 2 cut(s) 647, 1366
BbvI GCAGC 6 cut(s) 77, 298, 732, 1089, 1162, 1698
BccI CCATC 6 cut(s) 25, 55, 220, 634, 653, 1055
BciT130I CCWGG 4 cut(s) 591, 884, 1019, 1409
BciVI GTATCC 1 cut(s) 1213
BclI TGATCA 1 cut(s) 598
BcnI CCSGG 3 cut(s) 730, 968, 969
BcoDI GTCTC 3 cut(s) 48, 929, 1015
BcuI ACTAGT 1 cut(s) 865
BfaI CTAG 6 cut(s) 656, 866, 876, 1055, 1572, 1783
BfoI RGCGCY 1 cut(s) 691
BfrI CTTAAG 1 cut(s) 1775
BfuI GTATCC 1 cut(s) 1213
BisI GCNGC 7 cut(s) 66, 287, 746, 899, 1103, 1151, 1712
BlsI GCNGC 7 cut(s) 67, 288, 747, 900, 1104, 1152, 1713
Bme1390I CCNGG 7 cut(s) 591, 730, 884, 968, 969, 1019, 1409
Bme18I GGWCC 3 cut(s) 757, 1083, 1171
BmeRI GACNNNNNGTC 2 cut(s) 511, 1485
BmeT110I CYCGRG 1 cut(s) 967
BmgBI CACGTC 1 cut(s) 719
BmgT120I GGNCC 4 cut(s) 757, 1083, 1171, 1322
BmiI GGNNCC 3 cut(s) 707, 912, 1727
BmrFI CCNGG 7 cut(s) 591, 730, 884, 968, 969, 1019, 1409
BmrI ACTGGG 3 cut(s) 330, 515, 1321
BmsI GCATC 3 cut(s) 153, 760, 1761
BmuI ACTGGG 3 cut(s) 330, 515, 1321
BplI GAGNNNNNCTC 2 cut(s) 926, 958
Bpu10I CCTNAGC 1 cut(s) 1754
Bpu14I TTCGAA 1 cut(s) 1613
BpuEI CTTGAG 1 cut(s) 197
BpuMI CCSGG 3 cut(s) 730, 968, 969
BsaAI YACGTR 1 cut(s) 1476
BsaBI GATNNNNATC 1 cut(s) 663
BsaI GGTCTC 2 cut(s) 48, 929
BsaJI CCNNGG 5 cut(s) 498, 966, 967, 1325, 1516
BsaWI WCCGGW 2 cut(s) 57, 667
BsaXI ACNNNNNCTCC 4 cut(s) 474, 504, 694, 724
Bsc4I CCNNNNNNNGG 7 cut(s) 766, 797, 973, 1285, 1460, 1476, 1755
Bse118I RCCGGY 1 cut(s) 733
Bse1I ACTGG 4 cut(s) 325, 521, 914, 1316
Bse21I CCTNAGG 2 cut(s) 168, 238
Bse3DI GCAATG 1 cut(s) 1588
Bse8I GATNNNNATC 1 cut(s) 663
BseBI CCWGG 4 cut(s) 591, 884, 1019, 1409
BseDI CCNNGG 5 cut(s) 498, 966, 967, 1325, 1516
BseGI GGATG 9 cut(s) 36, 66, 231, 553, 626, 775, 892, 1066, 1071
BseJI GATNNNNATC 1 cut(s) 663
BseLI CCNNNNNNNGG 7 cut(s) 766, 797, 973, 1285, 1460, 1476, 1755
BseMI GCAATG 1 cut(s) 1588
BseMII CTCAG 2 cut(s) 1485, 1745
BseNI ACTGG 4 cut(s) 325, 521, 914, 1316
BseRI GAGGAG 5 cut(s) 368, 931, 934, 937, 1268
BseSI GKGCMC 2 cut(s) 647, 1730
BseX3I CGGCCG 1 cut(s) 731
BseXI GCAGC 6 cut(s) 77, 298, 732, 1089, 1162, 1698
BseYI CCCAGC 4 cut(s) 8, 14, 677, 1265
Bsh1236I CGCG 1 cut(s) 684
Bsh1285I CGRYCG 1 cut(s) 734
BshFI GGCC 5 cut(s) 27, 733, 801, 1324, 1469
BshNI GGYRCC 1 cut(s) 1725
BsiEI CGRYCG 1 cut(s) 734
BsiHKAI GWGCWC 2 cut(s) 647, 1366
BsiHKCI CYCGRG 1 cut(s) 967
BsiSI CCGG 6 cut(s) 28, 58, 668, 730, 734, 968
BslFI GGGAC 2 cut(s) 503, 1718
BslI CCNNNNNNNGG 7 cut(s) 766, 797, 973, 1285, 1460, 1476, 1755
BsmAI GTCTC 3 cut(s) 48, 929, 1015
BsmFI GGGAC 2 cut(s) 503, 1718
BsnI GGCC 5 cut(s) 27, 733, 801, 1324, 1469
Bso31I GGTCTC 2 cut(s) 48, 929
BsoBI CYCGRG 1 cut(s) 967
Bsp119I TTCGAA 1 cut(s) 1613
Bsp1286I GDGCHC 5 cut(s) 308, 647, 1366, 1516, 1730
Bsp143I GATC 7 cut(s) 110, 324, 433, 598, 664, 695, 1400
BspACI CCGC 4 cut(s) 684, 767, 898, 1547
BspANI GGCC 5 cut(s) 27, 733, 801, 1324, 1469
BspCNI CTCAG 2 cut(s) 1486, 1744
BspFNI CGCG 1 cut(s) 684
BspHI TCATGA 2 cut(s) 1366, 1620
BspLI GGNNCC 3 cut(s) 707, 912, 1727
BspPI GGATC 4 cut(s) 118, 332, 659, 1395
BspT104I TTCGAA 1 cut(s) 1613
BspT107I GGYRCC 1 cut(s) 1725
BspTI CTTAAG 1 cut(s) 1775
BspTNI GGTCTC 2 cut(s) 48, 929
BsrDI GCAATG 1 cut(s) 1588
BsrFI RCCGGY 1 cut(s) 733
BsrI ACTGG 4 cut(s) 325, 521, 914, 1316
BssAI RCCGGY 1 cut(s) 733
BssECI CCNNGG 5 cut(s) 498, 966, 967, 1325, 1516
BssMI GATC 7 cut(s) 110, 324, 433, 598, 664, 695, 1400
BssSI CACGAG 1 cut(s) 350
BssT1I CCWWGG 2 cut(s) 1325, 1516
Bst2BI CACGAG 1 cut(s) 350
Bst2UI CCWGG 4 cut(s) 591, 884, 1019, 1409
Bst4CI ACNGT 7 cut(s) 502, 710, 742, 844, 907, 1201, 1220
Bst6I CTCTTC 1 cut(s) 182
BstAFI CTTAAG 1 cut(s) 1775
BstBAI YACGTR 1 cut(s) 1476
BstBI TTCGAA 1 cut(s) 1613
BstC8I GCNNGC 5 cut(s) 686, 775, 799, 1155, 1661
BstDEI CTNAG 7 cut(s) 168, 238, 1458, 1494, 1525, 1731, 1754
BstDSI CCRYGG 1 cut(s) 498
BstF5I GGATG 9 cut(s) 36, 66, 231, 553, 626, 775, 892, 1066, 1071
BstFNI CGCG 1 cut(s) 684
BstH2I RGCGCY 1 cut(s) 691
BstHHI GCGC 4 cut(s) 291, 474, 684, 690
BstKTI GATC 7 cut(s) 113, 327, 436, 601, 667, 698, 1403
BstMAI GTCTC 3 cut(s) 48, 929, 1015
BstMBI GATC 7 cut(s) 110, 324, 433, 598, 664, 695, 1400
BstMCI CGRYCG 1 cut(s) 734
BstMWI GCNNNNNNNGC 1 cut(s) 377
BstNI CCWGG 4 cut(s) 591, 884, 1019, 1409
BstNSI RCATGY 3 cut(s) 1181, 1242, 1711
BstSCI CCNGG 7 cut(s) 589, 728, 882, 966, 967, 1017, 1407
BstSLI GKGCMC 2 cut(s) 647, 1730
BstUI CGCG 1 cut(s) 684
BstV1I GCAGC 6 cut(s) 77, 298, 732, 1089, 1162, 1698
BstX2I RGATCY 1 cut(s) 1400
BstXI CCANNNNNNTGG 1 cut(s) 659
BstYI RGATCY 1 cut(s) 1400
BstZI CGGCCG 1 cut(s) 731
Bsu36I CCTNAGG 2 cut(s) 168, 238
BsuI GTATCC 1 cut(s) 1213
BsuRI GGCC 5 cut(s) 27, 733, 801, 1324, 1469
BtgI CCRYGG 1 cut(s) 498
BtrI CACGTC 1 cut(s) 719
BtsCI GGATG 9 cut(s) 36, 66, 231, 553, 626, 775, 892, 1066, 1071
BtsI GCAGTG 1 cut(s) 951
BtsIMutI CAGTG 6 cut(s) 528, 647, 912, 951, 1051, 1491
Cac8I GCNNGC 5 cut(s) 686, 775, 799, 1155, 1661
CciI TCATGA 2 cut(s) 1366, 1620
CfoI GCGC 4 cut(s) 291, 474, 684, 690
Cfr10I RCCGGY 1 cut(s) 733
Cfr13I GGNCC 4 cut(s) 757, 1083, 1171, 1322
Cfr9I CCCGGG 1 cut(s) 967
CseI GACGC 2 cut(s) 732, 1231
Csp6I GTAC 3 cut(s) 714, 962, 1050
CviQI GTAC 3 cut(s) 714, 962, 1050
DdeI CTNAG 7 cut(s) 168, 238, 1458, 1494, 1525, 1731, 1754
DpnI GATC 7 cut(s) 112, 326, 435, 600, 666, 697, 1402
DpnII GATC 7 cut(s) 110, 324, 433, 598, 664, 695, 1400
DrdI GACNNNNNNGTC 1 cut(s) 983
DriI GACNNNNNGTC 2 cut(s) 511, 1485
DseDI GACNNNNNNGTC 1 cut(s) 983
EaeI YGGCCR 2 cut(s) 731, 799
EagI CGGCCG 1 cut(s) 731
Eam1104I CTCTTC 1 cut(s) 182
Eam1105I GACNNNNNGTC 2 cut(s) 511, 1485
EarI CTCTTC 1 cut(s) 182
EciI GGCGGA 1 cut(s) 782
EclXI CGGCCG 1 cut(s) 731
Eco130I CCWWGG 2 cut(s) 1325, 1516
Eco24I GRGCYC 2 cut(s) 308, 1516
Eco31I GGTCTC 2 cut(s) 48, 929
Eco47I GGWCC 3 cut(s) 757, 1083, 1171
Eco52I CGGCCG 1 cut(s) 731
Eco81I CCTNAGG 2 cut(s) 168, 238
Eco88I CYCGRG 1 cut(s) 967
EcoO109I RGGNCCY 1 cut(s) 757
EcoRI GAATTC 1 cut(s) 1090
EcoRII CCWGG 4 cut(s) 589, 882, 1017, 1407
EcoT14I CCWWGG 2 cut(s) 1325, 1516
EcoT38I GRGCYC 2 cut(s) 308, 1516
ErhI CCWWGG 2 cut(s) 1325, 1516
FalI AAGNNNNNCTT 2 cut(s) 236, 268
FaqI GGGAC 2 cut(s) 503, 1718
FauI CCCGC 1 cut(s) 677
FbaI TGATCA 1 cut(s) 598
FblI GTMKAC 3 cut(s) 721, 1273, 1637
Fnu4HI GCNGC 7 cut(s) 66, 287, 746, 899, 1103, 1151, 1712
FokI GGATG 9 cut(s) 43, 73, 238, 540, 613, 782, 899, 1058, 1073
FriOI GRGCYC 2 cut(s) 308, 1516
Fsp4HI GCNGC 7 cut(s) 66, 287, 746, 899, 1103, 1151, 1712
FspAI RTGCGCAY 1 cut(s) 473
FspBI CTAG 6 cut(s) 656, 866, 876, 1055, 1572, 1783
FspI TGCGCA 1 cut(s) 473
GlaI GCGC 4 cut(s) 290, 473, 683, 689
GluI GCNGC 7 cut(s) 66, 287, 746, 899, 1103, 1151, 1712
GsaI CCCAGC 4 cut(s) 12, 18, 681, 1269
HaeII RGCGCY 1 cut(s) 691
HaeIII GGCC 5 cut(s) 27, 733, 801, 1324, 1469
HapII CCGG 6 cut(s) 28, 58, 668, 730, 734, 968
HgaI GACGC 2 cut(s) 732, 1231
HhaI GCGC 4 cut(s) 291, 474, 684, 690
Hin6I GCGC 4 cut(s) 289, 472, 682, 688
HinP1I GCGC 4 cut(s) 289, 472, 682, 688
HincII GTYRAC 4 cut(s) 505, 562, 722, 1144
HindII GTYRAC 4 cut(s) 505, 562, 722, 1144
HindIII AAGCTT 2 cut(s) 612, 775
HinfI GANTC 7 cut(s) 90, 271, 485, 512, 1275, 1538, 1647
HpaII CCGG 6 cut(s) 28, 58, 668, 730, 734, 968
HphI GGTGA 6 cut(s) 319, 502, 620, 674, 1352, 1780
Hpy188I TCNGA 5 cut(s) 619, 695, 1015, 1585, 1646
Hpy188III TCNNGA 6 cut(s) 205, 268, 275, 1367, 1603, 1621
Hpy99I CGWCG 4 cut(s) 714, 723, 726, 1491
HpyAV CCTTC 2 cut(s) 801, 1759
HpyCH4III ACNGT 7 cut(s) 502, 710, 742, 844, 907, 1201, 1220
HpyCH4IV ACGT 6 cut(s) 196, 213, 718, 927, 1023, 1475
HpyF10VI GCNNNNNNNGC 1 cut(s) 377
HpyF3I CTNAG 7 cut(s) 168, 238, 1458, 1494, 1525, 1731, 1754
HpySE526I ACGT 6 cut(s) 196, 213, 718, 927, 1023, 1475
HspAI GCGC 4 cut(s) 289, 472, 682, 688
Ksp22I TGATCA 1 cut(s) 598
Kzo9I GATC 7 cut(s) 110, 324, 433, 598, 664, 695, 1400
LmnI GCTCC 2 cut(s) 731, 910
Lsp1109I GCAGC 6 cut(s) 77, 298, 732, 1089, 1162, 1698
LweI GCATC 3 cut(s) 153, 760, 1761
MaeI CTAG 6 cut(s) 656, 866, 876, 1055, 1572, 1783
MaeII ACGT 6 cut(s) 196, 213, 718, 927, 1023, 1475
MaeIII GTNAC 4 cut(s) 736, 985, 1180, 1520
MalI GATC 7 cut(s) 112, 326, 435, 600, 666, 697, 1402
MboI GATC 7 cut(s) 110, 324, 433, 598, 664, 695, 1400
MboII GAAGA 2 cut(s) 199, 244
MfeI CAATTG 1 cut(s) 1348
MflI RGATCY 1 cut(s) 1400
MhlI GDGCHC 5 cut(s) 308, 647, 1366, 1516, 1730
MlsI TGGCCA 1 cut(s) 801
MluNI TGGCCA 1 cut(s) 801
MlyI GAGTC 3 cut(s) 265, 521, 1269
MmeI TCCRAC 4 cut(s) 88, 910, 1266, 1441
Mox20I TGGCCA 1 cut(s) 801
MscI TGGCCA 1 cut(s) 801
MseI TTAA 6 cut(s) 390, 1119, 1160, 1632, 1665, 1776
MslI CAYNNNNRTG 1 cut(s) 825
Msp20I TGGCCA 1 cut(s) 801
MspCI CTTAAG 1 cut(s) 1775
MspI CCGG 6 cut(s) 28, 58, 668, 730, 734, 968
MspR9I CCNGG 7 cut(s) 591, 730, 884, 968, 969, 1019, 1409
MunI CAATTG 1 cut(s) 1348
MvaI CCWGG 4 cut(s) 591, 884, 1019, 1409
MvnI CGCG 1 cut(s) 684
MwoI GCNNNNNNNGC 1 cut(s) 377
NciI CCSGG 3 cut(s) 730, 968, 969
NdeII GATC 7 cut(s) 110, 324, 433, 598, 664, 695, 1400
NlaIV GGNNCC 3 cut(s) 707, 912, 1727
NmuCI GTSAC 2 cut(s) 985, 1180
NsbI TGCGCA 1 cut(s) 473
NspI RCATGY 3 cut(s) 1181, 1242, 1711
NspV TTCGAA 1 cut(s) 1613
PagI TCATGA 2 cut(s) 1366, 1620
PciI ACATGT 1 cut(s) 1177
PcsI WCGNNNNNNNCGW 1 cut(s) 718
PfeI GAWTC 4 cut(s) 90, 485, 1538, 1647
PfoI TCCNGGA 1 cut(s) 882
PkrI GCNGC 7 cut(s) 67, 288, 747, 900, 1104, 1152, 1713
PleI GAGTC 3 cut(s) 265, 520, 1269
PpsI GAGTC 3 cut(s) 265, 520, 1269
Ppu21I YACGTR 1 cut(s) 1476
PpuMI RGGWCCY 1 cut(s) 757
PscI ACATGT 1 cut(s) 1177
Psp1406I AACGTT 1 cut(s) 213
Psp5II RGGWCCY 1 cut(s) 757
Psp6I CCWGG 4 cut(s) 589, 882, 1017, 1407
PspFI CCCAGC 4 cut(s) 8, 14, 677, 1265
PspGI CCWGG 4 cut(s) 589, 882, 1017, 1407
PspN4I GGNNCC 3 cut(s) 707, 912, 1727
PspPI GGNCC 4 cut(s) 757, 1083, 1171, 1322
PspPPI RGGWCCY 1 cut(s) 757
PsuI RGATCY 1 cut(s) 1400
RsaI GTAC 3 cut(s) 715, 963, 1051
RsaNI GTAC 3 cut(s) 714, 962, 1050
RseI CAYNNNNRTG 1 cut(s) 825
SalI GTCGAC 1 cut(s) 720
SaqAI TTAA 6 cut(s) 390, 1119, 1160, 1632, 1665, 1776
SatI GCNGC 7 cut(s) 66, 287, 746, 899, 1103, 1151, 1712
Sau3AI GATC 7 cut(s) 110, 324, 433, 598, 664, 695, 1400
Sau96I GGNCC 4 cut(s) 757, 1083, 1171, 1322
SchI GAGTC 3 cut(s) 265, 521, 1269
ScrFI CCNGG 7 cut(s) 591, 730, 884, 968, 969, 1019, 1409
SduI GDGCHC 5 cut(s) 308, 647, 1366, 1516, 1730
SfaNI GCATC 3 cut(s) 153, 760, 1761
SfuI TTCGAA 1 cut(s) 1613
SgrDI CGTCGACG 1 cut(s) 720
SinI GGWCC 3 cut(s) 757, 1083, 1171
SmaI CCCGGG 1 cut(s) 969
SmiMI CAYNNNNRTG 1 cut(s) 825
SmlI CTYRAG 2 cut(s) 176, 1775
SmoI CTYRAG 2 cut(s) 176, 1775
SpeI ACTAGT 1 cut(s) 865
SsiI CCGC 4 cut(s) 684, 767, 898, 1547
SspMI CTAG 6 cut(s) 656, 866, 876, 1055, 1572, 1783
StyD4I CCNGG 7 cut(s) 589, 728, 882, 966, 967, 1017, 1407
StyI CCWWGG 2 cut(s) 1325, 1516
TaaI ACNGT 7 cut(s) 502, 710, 742, 844, 907, 1201, 1220
TaiI ACGT 6 cut(s) 199, 216, 721, 930, 1026, 1478
TaqI TCGA 5 cut(s) 432, 721, 1215, 1501, 1613
TauI GCSGC 1 cut(s) 901
TfiI GAWTC 4 cut(s) 90, 485, 1538, 1647
Tru1I TTAA 6 cut(s) 390, 1119, 1160, 1632, 1665, 1776
Tru9I TTAA 6 cut(s) 390, 1119, 1160, 1632, 1665, 1776
TscAI CASTG 6 cut(s) 528, 647, 912, 958, 1051, 1498
TseFI GTSAC 2 cut(s) 985, 1180
TseI GCWGC 6 cut(s) 65, 286, 745, 1102, 1150, 1711
Tsp45I GTSAC 2 cut(s) 985, 1180
TspDTI ATGAA 7 cut(s) 837, 1060, 1112, 1200, 1383, 1609, 1637
TspMI CCCGGG 1 cut(s) 967
TspRI CASTG 6 cut(s) 528, 647, 912, 958, 1051, 1498
Vha464I CTTAAG 1 cut(s) 1775
VneI GTGCAC 1 cut(s) 643
VpaK11BI GGWCC 3 cut(s) 757, 1083, 1171
XapI RAATTY 3 cut(s) 1090, 1616, 1676
XceI RCATGY 3 cut(s) 1181, 1242, 1711
XcmI CCANNNNNNNNNTGG 1 cut(s) 1462
XmaI CCCGGG 1 cut(s) 967
XmiI GTMKAC 3 cut(s) 721, 1273, 1637
XspI CTAG 6 cut(s) 656, 866, 876, 1055, 1572, 1783
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.